Installation:

This package uses GNU autoconf generated configure scripts, see the
file INSTALL.configure for generic configure documentation.

Quickstart: Usually you'll just have to type:
----------
	./configure
	make

System specific notes:
calculating the partition function for long sequences ( >400 bases)
generates a lot of floating point underflows. On some system this can slow
down the calculation dramatically because an exception is invoked for each 
underflow. How to avoid this problem is highly system specific:

On SunOS 4.1 the remedy is calling nonstandard_arithmetic() add a -DSUN4 to
the CFLAGS in lib/makefile to do this. Use CC=gcc since SUN's standard cc
doesn't understand ANSI C.

On HP machines running hpux-9 or hpux-10 add -DHP9 to the CFLAGS so that
fpsetfastmode() will be called.
