##gff-version 3 #!genome-build ASM904v1 #!genome-build-accession NCBI_Assembly:GCF_000009045.1 ##sequence-region NC_000964.3 1 4215606 ##species https://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?id=224308 # # BSGatlas version 1.1 # A fine grained atlas of the Bacillus Subtillis genome # # This is a gff file representation of the BSGatlas for Bacillus subtilis # according to the NCBI assembly ASM904v1. The columns are: # # 1. Chromosome: Here `basu168` for coherence with the browser hub # 2. Source: Is BSGatlas for this annotation. # 3. Type: The type for an annotation feature # 4. Start: Start and ... # 5. End: ... ending position of a feature. # 6. Score: Here not used, constant dot as value # 7. Strand: Strand of a feature. Possible values are {"+", "-", "."} # 8. Phase: Translation offset phase for coding sequences. Is either "0" or ".". # 9. List of attributes # # Attibutes are a semicolon separated list of = pairs. # Alternative values are a comma separated list. # Example: Name=GeneA;Synonyms=GeneX,GeneY # # The following keys are used: # # ID: Unique identifier for each row # Parent: List of hierarchical parent relationships # Derives_from: Link to gene from which a transcript feature originates # Name: The name of a feature # locus_tag: A locus identifier for genes; this often is the used identifier in external databases. # Description: Free descriptive text of a feature # comment: more ellaborate descriptive text of a feature # synonyms: List of alternative names # go: List of gene function terms accodting to the Gene Ontology # ec: List of Enzyme Classifications # subtiwiki_category: A gene classification system from SubtiWiki # kegg_pathways: Information about potentially associated KEGG pathways basu168 BSGatlas gene 24 297 . - . ID=BSGatlas-gene-1;color=#8F1D1D;Name=S2;locus_tag=new_24_297_c basu168 BSGatlas transcript 24 297 . - . ID=BSGatlas-transcript-3;color=#B37924;Parent=BSGatlas-gene-1;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 24 297 . - . ID=BSGatlas-gene-1_transcribed;color=#8F1D1D;Name=S2;Parent=BSGatlas-transcript-3;synonyms="S2";derives_from=BSGatlas-gene-1 basu168 BSGatlas transcript 157 3121 . + . ID=BSGatlas-transcript-5;color=#FF9900;Parent=BSGatlas-gene-4,BSGatlas-gene-5;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 157 3075 . + . ID=BSGatlas-transcript-4;color=#FF9900;Parent=BSGatlas-gene-4,BSGatlas-gene-5;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 157 409 . + . ID=BSGatlas-5'UTR-2;Parent=BSGatlas-transcript-4,BSGatlas-transcript-5;comment="5'UTR" basu168 BSGatlas gene 157 270 . + . ID=BSGatlas-gene-2;color=#999999;Name=TERMseq-predicted-riboswitch basu168 BSGatlas riboswitch 157 270 . + . ID=BSGatlas-gene-2_transcribed;color=#999999;Name=TERMseq-predicted-riboswitch;derives_from=BSGatlas-gene-2 basu168 BSGatlas gene 299 1067 . - . ID=BSGatlas-gene-3;color=#8F1D1D;Name=S4;locus_tag=new_299_1067_c basu168 BSGatlas transcript 299 1067 . - . ID=BSGatlas-transcript-6;color=#B37924;Parent=BSGatlas-gene-3;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 299 1067 . - . ID=BSGatlas-gene-3_transcribed;color=#8F1D1D;Name=S4;Parent=BSGatlas-transcript-6;synonyms="S4";derives_from=BSGatlas-gene-3 basu168 BSGatlas gene 410 1750 . + . ID=BSGatlas-gene-4;color=#1E90FF;Name=dnaA;locus_tag=BSU_00010,BSU00010 basu168 BSGatlas CDS 410 1750 . + 0 ID=BSGatlas-gene-4_transcribed;color=#1E90FF;Name=dnaA;Parent=BSGatlas-transcript-4,BSGatlas-transcript-5;comment="chromosomal replication initiator informationalATPase";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0003688 DNA replication origin binding,GO:0005515 protein binding,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006260 DNA replication,GO:0006270 DNA replication initiation,GO:0006275 regulation of DNA replication,GO:0017111 nucleoside-triphosphatase activity,GO:0043565 sequence-specific DNA binding,GO:0098847 sequence-specific single stranded DNA binding";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.1 DNA replication,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="dnaA,dnaH,dnaJ,dnaK";derives_from=BSGatlas-gene-4 basu168 BSGatlas UTR 1751 1938 . + . ID=BSGatlas-internal_UTR-1;Parent=BSGatlas-transcript-4,BSGatlas-transcript-5;comment="internal_UTR" basu168 BSGatlas gene 1939 3075 . + . ID=BSGatlas-gene-5;color=#1E90FF;Name=dnaN;locus_tag=BSU_00020,BSU00020 basu168 BSGatlas CDS 1939 3075 . + 0 ID=BSGatlas-gene-5_transcribed;color=#1E90FF;Name=dnaN;Parent=BSGatlas-transcript-4,BSGatlas-transcript-5;comment="DNA polymerase III (beta subunit)";ec="2.7.7.7,EC-2.7.7.7";go="GO:0003677 DNA binding,GO:0003887 DNA-directed DNA polymerase activity,GO:0005737 cytoplasm,GO:0006260 DNA replication,GO:0006261 DNA-dependent DNA replication,GO:0008408 3'-5' exonuclease activity,GO:0009360 DNA polymerase III complex,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0090305 nucleic acid phosphodiester bond hydrolysis";kegg_pathways="DNA replication (ko03030),Homologous recombination (ko03440),Mismatch repair (ko03430)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.1 DNA replication,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.7 Mismatch repair (MMR),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="dnaG,dnaK,dnaN";derives_from=BSGatlas-gene-5 basu168 BSGatlas UTR 3076 3121 . + . ID=BSGatlas-3'UTR-1;Parent=BSGatlas-transcript-5;comment="3'UTR" basu168 BSGatlas transcript 3180 9501 . + . ID=BSGatlas-transcript-8;color=#FF9900;Parent=BSGatlas-gene-6,BSGatlas-gene-7,BSGatlas-gene-8,BSGatlas-gene-9,BSGatlas-gene-10;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 3180 6833 . + . ID=BSGatlas-transcript-7;color=#FF9900;Parent=BSGatlas-gene-6,BSGatlas-gene-7,BSGatlas-gene-8,BSGatlas-gene-9;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 3180 3205 . + . ID=BSGatlas-5'UTR-3;Parent=BSGatlas-transcript-7,BSGatlas-transcript-8;comment="5'UTR" basu168 BSGatlas gene 3206 3421 . + . ID=BSGatlas-gene-6;color=#1E90FF;Name=yaaA;locus_tag=BSU_00030,BSU00030 basu168 BSGatlas CDS 3206 3421 . + 0 ID=BSGatlas-gene-6_transcribed;color=#1E90FF;Name=yaaA;Parent=BSGatlas-transcript-7,BSGatlas-transcript-8;comment="RNA binding protein involved in ribosomematuration";go="GO:0003723 RNA binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.6 Ribosome assembly";synonyms="rlbA,yaaA";derives_from=BSGatlas-gene-6 basu168 BSGatlas transcript 3437 9501 . + . ID=BSGatlas-transcript-10;color=#FF9900;Parent=BSGatlas-gene-7,BSGatlas-gene-8,BSGatlas-gene-9,BSGatlas-gene-10;comment="Based on: BSGatlas" basu168 BSGatlas transcript 3437 6833 . + . ID=BSGatlas-transcript-9;color=#FF9900;Parent=BSGatlas-gene-7,BSGatlas-gene-8,BSGatlas-gene-9;comment="Based on: BSGatlas" basu168 BSGatlas gene 3437 4549 . + . ID=BSGatlas-gene-7;color=#1E90FF;Name=recF;locus_tag=BSU_00040,BSU00040 basu168 BSGatlas CDS 3437 4549 . + 0 ID=BSGatlas-gene-7_transcribed;color=#1E90FF;Name=recF;Parent=BSGatlas-transcript-7,BSGatlas-transcript-8,BSGatlas-transcript-9,BSGatlas-transcript-10;comment="RecA filament-DNA complex stabilisation, ssDNAand dsDNA binding, ATP binding";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0003697 single-stranded DNA binding,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006260 DNA replication,GO:0006281 DNA repair,GO:0006302 double-strand break repair,GO:0006974 cellular response to DNA damage stimulus,GO:0009295 nucleoid,GO:0009432 SOS response,GO:0043590 bacterial nucleoid";kegg_pathways="Homologous recombination (ko03440)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins";synonyms="recF";derives_from=BSGatlas-gene-7 basu168 BSGatlas UTR 4550 4566 . + . ID=BSGatlas-internal_UTR-2;Parent=BSGatlas-transcript-7,BSGatlas-transcript-8,BSGatlas-transcript-9,BSGatlas-transcript-10;comment="internal_UTR" basu168 BSGatlas gene 4567 4812 . + . ID=BSGatlas-gene-8;color=#1E90FF;Name=remB;locus_tag=BSU_00050,BSU00050 basu168 BSGatlas CDS 4567 4812 . + 0 ID=BSGatlas-gene-8_transcribed;color=#1E90FF;Name=remB;Parent=BSGatlas-transcript-7,BSGatlas-transcript-8,BSGatlas-transcript-9,BSGatlas-transcript-10;comment="regulator of extracellular matrix formation";go="GO:0042710 biofilm formation";subtiwiki_category="SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.2 Biofilm formation,SW 4.1.2.5 Other proteins required for biofilm formation";synonyms="remB,yaaB";derives_from=BSGatlas-gene-8 basu168 BSGatlas UTR 4813 4866 . + . ID=BSGatlas-internal_UTR-3;Parent=BSGatlas-transcript-7,BSGatlas-transcript-8,BSGatlas-transcript-9,BSGatlas-transcript-10;comment="internal_UTR" basu168 BSGatlas gene 4867 6783 . + . ID=BSGatlas-gene-9;color=#1E90FF;Name=gyrB;locus_tag=BSU_00060,BSU00060 basu168 BSGatlas CDS 4867 6783 . + 0 ID=BSGatlas-gene-9_transcribed;color=#1E90FF;Name=gyrB;Parent=BSGatlas-transcript-7,BSGatlas-transcript-8,BSGatlas-transcript-9,BSGatlas-transcript-10;comment="DNA gyrase (subunit B)";ec="5.99.1.3";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0003677 DNA binding,GO:0003916 DNA topoisomerase activity,GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity,GO:0005524 ATP binding,GO:0005694 chromosome,GO:0005737 cytoplasm,GO:0006261 DNA-dependent DNA replication,GO:0006265 DNA topological change,GO:0007059 chromosome segregation,GO:0009295 nucleoid,GO:0016853 isomerase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.3 DNA condensation/ segregation,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="gyrB,novA";derives_from=BSGatlas-gene-9 basu168 BSGatlas UTR 6784 6993 . + . ID=BSGatlas-internal_UTR-4;Parent=BSGatlas-transcript-8,BSGatlas-transcript-10;comment="internal_UTR" basu168 BSGatlas UTR 6784 6833 . + . ID=BSGatlas-3'UTR-2;Parent=BSGatlas-transcript-7,BSGatlas-transcript-9;comment="3'UTR" basu168 BSGatlas transcript 6916 9501 . + . ID=BSGatlas-transcript-11;color=#FF9900;Parent=BSGatlas-gene-10;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 6916 6993 . + . ID=BSGatlas-5'UTR-4;Parent=BSGatlas-transcript-11;comment="5'UTR" basu168 BSGatlas gene 6994 9459 . + . ID=BSGatlas-gene-10;color=#1E90FF;Name=gyrA;locus_tag=BSU_00070,BSU00070 basu168 BSGatlas CDS 6994 9459 . + 0 ID=BSGatlas-gene-10_transcribed;color=#1E90FF;Name=gyrA;Parent=BSGatlas-transcript-8,BSGatlas-transcript-10,BSGatlas-transcript-11;comment="DNA gyrase (subunit A)";ec="5.99.1.3";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0003916 DNA topoisomerase activity,GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity,GO:0005524 ATP binding,GO:0005694 chromosome,GO:0005737 cytoplasm,GO:0006261 DNA-dependent DNA replication,GO:0006265 DNA topological change,GO:0007059 chromosome segregation,GO:0009295 nucleoid,GO:0016853 isomerase activity";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.3 DNA condensation/ segregation,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="gyrA,nalA";derives_from=BSGatlas-gene-10 basu168 BSGatlas transcript 9374 14850 . + . ID=BSGatlas-transcript-12;color=#FF9900;Parent=BSGatlas-gene-12,BSGatlas-gene-13,BSGatlas-gene-14,BSGatlas-gene-15,BSGatlas-gene-16;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 9374 9809 . + . ID=BSGatlas-5'UTR-5;Parent=BSGatlas-transcript-12;comment="5'UTR" basu168 BSGatlas UTR 9460 9501 . + . ID=BSGatlas-3'UTR-3;Parent=BSGatlas-transcript-8,BSGatlas-transcript-10,BSGatlas-transcript-11;comment="3'UTR" basu168 BSGatlas transcript 9540 14850 . + . ID=BSGatlas-transcript-13;color=#FF9900;Parent=BSGatlas-gene-12,BSGatlas-gene-13,BSGatlas-gene-14,BSGatlas-gene-15,BSGatlas-gene-16;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 9540 9809 . + . ID=BSGatlas-5'UTR-6;Parent=BSGatlas-transcript-13;comment="5'UTR" basu168 BSGatlas transcript 9637 14850 . + . ID=BSGatlas-transcript-14;color=#FF9900;Parent=BSGatlas-gene-12,BSGatlas-gene-13,BSGatlas-gene-14,BSGatlas-gene-15,BSGatlas-gene-16;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 9637 9809 . + . ID=BSGatlas-5'UTR-7;Parent=BSGatlas-transcript-14;comment="5'UTR" basu168 BSGatlas gene 9748 9815 . - . ID=BSGatlas-gene-11;color=#24B324;Name=Bacillaceae-1 basu168 BSGatlas sRNA 9748 9815 . - . ID=BSGatlas-gene-11_transcribed;color=#24B324;Name=Bacillaceae-1;derives_from=BSGatlas-gene-11 basu168 BSGatlas gene 9810 11364 . + . ID=BSGatlas-gene-12;color=#CC33FF;Name=rrnO-16S;locus_tag=BSU_rRNA_1,BSU_RRNA_1 basu168 BSGatlas rRNA 9810 11364 . + . ID=BSGatlas-gene-12_transcribed;color=#CC33FF;Name=rrnO-16S;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnO-16S";derives_from=BSGatlas-gene-12 basu168 BSGatlas UTR 11365 11462 . + . ID=BSGatlas-internal_UTR-5;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="internal_UTR" basu168 BSGatlas gene 11463 11540 . + . ID=BSGatlas-gene-13;color=#FFFF00;Name=trnO-Ile;locus_tag=BSU_tRNA_5,BSU_TRNA_5 basu168 BSGatlas tRNA 11463 11540 . + . ID=BSGatlas-gene-13_transcribed;color=#FFFF00;Name=trnO-Ile;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="tRNA-Ile";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnO-Ile";derives_from=BSGatlas-gene-13 basu168 BSGatlas gene 11551 11627 . + . ID=BSGatlas-gene-14;color=#FFFF00;Name=trnO-Ala;locus_tag=BSU_tRNA_6,BSU_TRNA_6 basu168 BSGatlas tRNA 11551 11627 . + . ID=BSGatlas-gene-14_transcribed;color=#FFFF00;Name=trnO-Ala;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="tRNA-Ala";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnO-Ala";derives_from=BSGatlas-gene-14 basu168 BSGatlas UTR 11628 11707 . + . ID=BSGatlas-internal_UTR-6;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="internal_UTR" basu168 BSGatlas gene 11708 14636 . + . ID=BSGatlas-gene-15;color=#CC33FF;Name=rrnO-23S;locus_tag=BSU_rRNA_2,BSU_RRNA_2 basu168 BSGatlas rRNA 11708 14636 . + . ID=BSGatlas-gene-15_transcribed;color=#CC33FF;Name=rrnO-23S;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnO-23S";derives_from=BSGatlas-gene-15 basu168 BSGatlas UTR 14637 14690 . + . ID=BSGatlas-internal_UTR-7;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="internal_UTR" basu168 BSGatlas gene 14691 14810 . + . ID=BSGatlas-gene-16;color=#CC33FF;Name=rrnO-5S;locus_tag=BSU_rRNA_3,BSU_RRNA_3 basu168 BSGatlas rRNA 14691 14810 . + . ID=BSGatlas-gene-16_transcribed;color=#CC33FF;Name=rrnO-5S;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnO-5S";derives_from=BSGatlas-gene-16 basu168 BSGatlas UTR 14811 14850 . + . ID=BSGatlas-3'UTR-4;Parent=BSGatlas-transcript-12,BSGatlas-transcript-13,BSGatlas-transcript-14;comment="3'UTR" basu168 BSGatlas transcript 14847 15985 . - . ID=BSGatlas-transcript-16;color=#B37924;Parent=BSGatlas-gene-17;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 14847 15875 . - . ID=BSGatlas-transcript-15;color=#B37924;Parent=BSGatlas-gene-17;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 14847 15794 . - . ID=BSGatlas-gene-17;color=#3474B3;Name=yaaC;locus_tag=BSU_00080,BSU00080 basu168 BSGatlas CDS 14847 15794 . - 0 ID=BSGatlas-gene-17_transcribed;color=#3474B3;Name=yaaC;Parent=BSGatlas-transcript-15,BSGatlas-transcript-16;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="yaaC";derives_from=BSGatlas-gene-17 basu168 BSGatlas UTR 15795 15985 . - . ID=BSGatlas-5'UTR-9;Parent=BSGatlas-transcript-16;comment="5'UTR" basu168 BSGatlas UTR 15795 15875 . - . ID=BSGatlas-5'UTR-8;Parent=BSGatlas-transcript-15;comment="5'UTR" basu168 BSGatlas transcript 15870 17445 . + . ID=BSGatlas-transcript-18;color=#FF9900;Parent=BSGatlas-gene-18;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 15870 17381 . + . ID=BSGatlas-transcript-17;color=#FF9900;Parent=BSGatlas-gene-18;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 15870 15914 . + . ID=BSGatlas-5'UTR-10;Parent=BSGatlas-transcript-17,BSGatlas-transcript-18;comment="5'UTR" basu168 BSGatlas gene 15915 17381 . + . ID=BSGatlas-gene-18;color=#1E90FF;Name=guaB;locus_tag=BSU_00090,BSU00090 basu168 BSGatlas CDS 15915 17381 . + 0 ID=BSGatlas-gene-18_transcribed;color=#1E90FF;Name=guaB;Parent=BSGatlas-transcript-17,BSGatlas-transcript-18;comment="inosine-monophosphate dehydrogenase";ec="1.1.1.205,EC-1.1.1.205";go="GO:0000166 nucleotide binding,GO:0003824 catalytic activity,GO:0003938 IMP dehydrogenase activity,GO:0006164 purine nucleotide biosynthetic process,GO:0006177 GMP biosynthetic process,GO:0016491 oxidoreductase activity,GO:0030554 adenyl nucleotide binding,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides,SW 3 Information processing,SW 3.5 Targets of second messengers,SW 3.5.3 Targets of (p)ppGpp,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.8 Phosphorylation on either a Ser, Thr or Tyr residue";synonyms="guaA,guaB";derives_from=BSGatlas-gene-18 basu168 BSGatlas gene 17238 17833 . - . ID=BSGatlas-gene-19;color=#8F1D1D;Name=S9;locus_tag=new_17238_17833_c basu168 BSGatlas transcript 17238 17833 . - . ID=BSGatlas-transcript-4832;color=#B37924;Parent=BSGatlas-gene-19;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 17238 17833 . - . ID=BSGatlas-gene-19_transcribed;color=#8F1D1D;Name=S9;Parent=BSGatlas-transcript-4832;synonyms="S9";derives_from=BSGatlas-gene-19 basu168 BSGatlas UTR 17382 17445 . + . ID=BSGatlas-3'UTR-6;Parent=BSGatlas-transcript-18;comment="3'UTR" basu168 BSGatlas transcript 17453 22204 . + . ID=BSGatlas-transcript-22;color=#FF9900;Parent=BSGatlas-gene-20,BSGatlas-gene-21,BSGatlas-gene-23,BSGatlas-gene-24,BSGatlas-gene-25;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 17453 20853 . + . ID=BSGatlas-transcript-21;color=#FF9900;Parent=BSGatlas-gene-20,BSGatlas-gene-21,BSGatlas-gene-23,BSGatlas-gene-24;comment="Based on: BSGatlas" basu168 BSGatlas transcript 17453 18865 . + . ID=BSGatlas-transcript-20;color=#FF9900;Parent=BSGatlas-gene-20;comment="Based on: BSGatlas" basu168 BSGatlas UTR 17453 17533 . + . ID=BSGatlas-5'UTR-11;Parent=BSGatlas-transcript-20,BSGatlas-transcript-21,BSGatlas-transcript-22;comment="5'UTR" basu168 BSGatlas gene 17534 18865 . + . ID=BSGatlas-gene-20;color=#1E90FF;Name=dacA;locus_tag=BSU_00100,BSU00100 basu168 BSGatlas CDS 17534 18865 . + 0 ID=BSGatlas-gene-20_transcribed;color=#1E90FF;Name=dacA;Parent=BSGatlas-transcript-20,BSGatlas-transcript-21,BSGatlas-transcript-22;comment="D-alanyl-D-alanine carboxypeptidase(penicillin-binding protein 5)";ec="3.4.16.4,EC-3.4.16.4";go="GO:0004180 carboxypeptidase activity,GO:0005576 extracellular region,GO:0005618 cell wall,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008360 regulation of cell shape,GO:0009002 serine-type D-Ala-D-Ala carboxypeptidase activity,GO:0009252 peptidoglycan biosynthetic process,GO:0016787 hydrolase activity";kegg_pathways="Metabolic pathways (ko01100),Peptidoglycan biosynthesis (ko00550)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.7 Penicillin-binding proteins,SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.2 Membrane proteins";synonyms="dacA";derives_from=BSGatlas-gene-20 basu168 BSGatlas UTR 18866 19061 . + . ID=BSGatlas-internal_UTR-8;Parent=BSGatlas-transcript-21,BSGatlas-transcript-22;comment="internal_UTR" basu168 BSGatlas transcript 18976 22204 . + . ID=BSGatlas-transcript-25;color=#FF9900;Parent=BSGatlas-gene-21,BSGatlas-gene-23,BSGatlas-gene-24,BSGatlas-gene-25;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 18976 20853 . + . ID=BSGatlas-transcript-24;color=#FF9900;Parent=BSGatlas-gene-21,BSGatlas-gene-23,BSGatlas-gene-24;comment="Based on: BSGatlas" basu168 BSGatlas transcript 18976 20558 . + . ID=BSGatlas-transcript-23;color=#FF9900;Parent=BSGatlas-gene-21,BSGatlas-gene-23;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 18976 19061 . + . ID=BSGatlas-5'UTR-12;Parent=BSGatlas-transcript-23,BSGatlas-transcript-24,BSGatlas-transcript-25;comment="5'UTR" basu168 BSGatlas gene 19062 19946 . + . ID=BSGatlas-gene-21;color=#1E90FF;Name=pdxS;locus_tag=BSU_00110,BSU00110 basu168 BSGatlas CDS 19062 19946 . + 0 ID=BSGatlas-gene-21_transcribed;color=#1E90FF;Name=pdxS;Parent=BSGatlas-transcript-21,BSGatlas-transcript-22,BSGatlas-transcript-23,BSGatlas-transcript-24,BSGatlas-transcript-25;comment="glutamine amidotransferase for pyridoxalphosphate synthesis; pyridoxal 5'-phosphate synthasecomplex, synthase subunit";ec="4.3.3.6,4.3.3.6;4.-.-.-";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016829 lyase activity,GO:0034301 endospore formation,GO:0042823 pyridoxal phosphate biosynthetic process";kegg_pathways="Metabolic pathways (ko01100),Vitamin B6 metabolism (ko00750)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.12 Biosynthesis of pyridoxal phosphate,SW 3 Information processing,SW 3.1 Genetics,SW 3.1.9 Newly identified competence genes,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.4.8 Phosphorylation on either a Ser, Thr or Tyr residue";synonyms="pdxS,yaaD";derives_from=BSGatlas-gene-21 basu168 BSGatlas gene 19194 19923 . - . ID=BSGatlas-gene-22;color=#8F1D1D;Name=S13;locus_tag=new_19194_19923_c basu168 BSGatlas transcript 19194 19923 . - . ID=BSGatlas-transcript-26;color=#B37924;Parent=BSGatlas-gene-22;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 19194 19923 . - . ID=BSGatlas-gene-22_transcribed;color=#8F1D1D;Name=S13;Parent=BSGatlas-transcript-26;synonyms="S13";derives_from=BSGatlas-gene-22 basu168 BSGatlas UTR 19947 19967 . + . ID=BSGatlas-internal_UTR-9;Parent=BSGatlas-transcript-21,BSGatlas-transcript-22,BSGatlas-transcript-23,BSGatlas-transcript-24,BSGatlas-transcript-25;comment="internal_UTR" basu168 BSGatlas gene 19968 20558 . + . ID=BSGatlas-gene-23;color=#1E90FF;Name=pdxT;locus_tag=BSU_00120,BSU00120 basu168 BSGatlas CDS 19968 20558 . + 0 ID=BSGatlas-gene-23_transcribed;color=#1E90FF;Name=pdxT;Parent=BSGatlas-transcript-21,BSGatlas-transcript-22,BSGatlas-transcript-23,BSGatlas-transcript-24,BSGatlas-transcript-25;comment="glutamine amidotransferase for pyridoxalphosphate synthesis; pyridoxal 5'-phosphate synthasecomplex, glutamine amidotransferase subunit PdxT";ec="3.5.1.2;4.3.3.6,4.3.3.6";go="GO:0006541 glutamine metabolic process,GO:0006543 glutamine catabolic process,GO:0016740 transferase activity,GO:0042823 pyridoxal phosphate biosynthetic process";kegg_pathways="Metabolic pathways (ko01100),Vitamin B6 metabolism (ko00750)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.12 Biosynthesis of pyridoxal phosphate,SW 3 Information processing,SW 3.1 Genetics,SW 3.1.9 Newly identified competence genes";synonyms="pdxT,yaaE";derives_from=BSGatlas-gene-23 basu168 BSGatlas UTR 20559 20609 . + . ID=BSGatlas-internal_UTR-10;Parent=BSGatlas-transcript-21,BSGatlas-transcript-22,BSGatlas-transcript-24,BSGatlas-transcript-25;comment="internal_UTR" basu168 BSGatlas gene 20610 20823 . + . ID=BSGatlas-gene-24;color=#999999;Name=T-box_tboS;locus_tag=BSU_misc_RNA_1,BSU_MISC_RNA_1 basu168 BSGatlas riboswitch 20610 20823 . + . ID=BSGatlas-gene-24_transcribed;color=#999999;Name=T-box_tboS;Parent=BSGatlas-transcript-21,BSGatlas-transcript-22,BSGatlas-transcript-24,BSGatlas-transcript-25;comment="T-box riboswitch specific of serine tRNA ligase";synonyms="BSU_misc_RNA_1";derives_from=BSGatlas-gene-24 basu168 BSGatlas UTR 20824 20879 . + . ID=BSGatlas-internal_UTR-11;Parent=BSGatlas-transcript-22,BSGatlas-transcript-25;comment="internal_UTR" basu168 BSGatlas UTR 20824 20853 . + . ID=BSGatlas-3'UTR-7;Parent=BSGatlas-transcript-21,BSGatlas-transcript-24;comment="3'UTR" basu168 BSGatlas transcript 20880 22204 . + . ID=BSGatlas-transcript-27;color=#FF9900;Parent=BSGatlas-gene-25;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 20880 22157 . + . ID=BSGatlas-gene-25;color=#1E90FF;Name=serS;locus_tag=BSU_00130,BSU00130 basu168 BSGatlas CDS 20880 22157 . + 0 ID=BSGatlas-gene-25_transcribed;color=#1E90FF;Name=serS;Parent=BSGatlas-transcript-22,BSGatlas-transcript-25,BSGatlas-transcript-27;comment="seryl-tRNA synthetase";ec="6.1.1.11,EC-6.1.1.11";go="GO:0000166 nucleotide binding,GO:0004812 aminoacyl-tRNA ligase activity,GO:0004828 serine-tRNA ligase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006412 translation,GO:0006418 tRNA aminoacylation for protein translation,GO:0006434 seryl-tRNA aminoacylation,GO:0016260 selenocysteine biosynthetic process,GO:0016874 ligase activity,GO:0097056 selenocysteinyl-tRNA(Sec) biosynthetic process";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="serS";derives_from=BSGatlas-gene-25 basu168 BSGatlas UTR 22158 22204 . + . ID=BSGatlas-3'UTR-8;Parent=BSGatlas-transcript-22,BSGatlas-transcript-25,BSGatlas-transcript-27;comment="3'UTR" basu168 BSGatlas transcript 22268 22429 . + . ID=BSGatlas-transcript-28;color=#FF9900;Parent=BSGatlas-gene-26;comment="Based on: BSGatlas" basu168 BSGatlas UTR 22268 22290 . + . ID=BSGatlas-5'UTR-13;Parent=BSGatlas-transcript-28;comment="5'UTR" basu168 BSGatlas gene 22291 22384 . + . ID=BSGatlas-gene-26;color=#FFFF00;Name=trnSL-Ser1;locus_tag=BSU_tRNA_7,BSU_TRNA_7 basu168 BSGatlas tRNA 22291 22384 . + . ID=BSGatlas-gene-26_transcribed;color=#FFFF00;Name=trnSL-Ser1;Parent=BSGatlas-transcript-28;comment="tRNA-Ser";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Ser1";derives_from=BSGatlas-gene-26 basu168 BSGatlas UTR 22385 22429 . + . ID=BSGatlas-3'UTR-9;Parent=BSGatlas-transcript-28;comment="3'UTR" basu168 BSGatlas transcript 22463 23828 . - . ID=BSGatlas-transcript-31;color=#B37924;Parent=BSGatlas-gene-28,BSGatlas-gene-27;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 22463 22495 . - . ID=BSGatlas-3'UTR-12;Parent=BSGatlas-transcript-31;comment="3'UTR" basu168 BSGatlas gene 22496 23149 . - . ID=BSGatlas-gene-27;color=#3474B3;Name=dck;locus_tag=BSU_00140,BSU00140 basu168 BSGatlas CDS 22496 23149 . - 0 ID=BSGatlas-gene-27_transcribed;color=#3474B3;Name=dck;Parent=BSGatlas-transcript-31;comment="deoxyadenosine/deoxycytidine kinase";ec="2.7.1.76;2.7.1.74,EC-2.7.1.74;EC-2.7.1.74;EC-2.7.1.76;EC-2.7.1.145";go="GO:0000166 nucleotide binding,GO:0004136 deoxyadenosine kinase activity,GO:0004137 deoxycytidine kinase activity,GO:0005524 ATP binding,GO:0006139 nucleobase-containing compound metabolic process,GO:0006170 dAMP biosynthetic process,GO:0009157 deoxyribonucleoside monophosphate biosynthetic process,GO:0009165 nucleotide biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016773 phosphotransferase activity, alcohol group as acceptor";kegg_pathways="Metabolic pathways (ko01100),Purine metabolism (ko00230),Pyrimidine metabolism (ko00240)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.3 Purine salvage and interconversion";synonyms="dck,yaaF";derives_from=BSGatlas-gene-27 basu168 BSGatlas gene 23146 23769 . - . ID=BSGatlas-gene-28;color=#3474B3;Name=dgk;locus_tag=BSU_00150,BSU00150 basu168 BSGatlas CDS 23146 23769 . - 0 ID=BSGatlas-gene-28_transcribed;color=#3474B3;Name=dgk;Parent=BSGatlas-transcript-31;comment="deoxyguanosine kinase";ec="2.7.1.113,EC-2.7.1.74;EC-2.7.1.113;EC-2.7.1.145";go="GO:0000166 nucleotide binding,GO:0004138 deoxyguanosine kinase activity,GO:0005524 ATP binding,GO:0006139 nucleobase-containing compound metabolic process,GO:0009157 deoxyribonucleoside monophosphate biosynthetic process,GO:0009165 nucleotide biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016773 phosphotransferase activity, alcohol group as acceptor";kegg_pathways="Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.3 Purine salvage and interconversion";synonyms="dgk,yaaG";derives_from=BSGatlas-gene-28 basu168 BSGatlas UTR 23770 23828 . - . ID=BSGatlas-5'UTR-14;Parent=BSGatlas-transcript-31;comment="5'UTR" basu168 BSGatlas transcript 23841 25810 . - . ID=BSGatlas-transcript-33;color=#B37924;Parent=BSGatlas-gene-30,BSGatlas-gene-29;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 23841 25184 . - . ID=BSGatlas-transcript-32;color=#B37924;Parent=BSGatlas-gene-29;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 23841 23867 . - . ID=BSGatlas-3'UTR-13;Parent=BSGatlas-transcript-32,BSGatlas-transcript-33;comment="3'UTR" basu168 BSGatlas gene 23868 25151 . - . ID=BSGatlas-gene-29;color=#3474B3;Name=yaaH;locus_tag=BSU_00160,BSU00160 basu168 BSGatlas CDS 23868 25151 . - 0 ID=BSGatlas-gene-29_transcribed;color=#3474B3;Name=yaaH;Parent=BSGatlas-transcript-32,BSGatlas-transcript-33;comment="spore peptidoglycan N-acetylglucosaminidase";ec="3.2.1.-";go="GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0004568 chitinase activity,GO:0005975 carbohydrate metabolic process,GO:0006032 chitin catabolic process,GO:0016998 cell wall macromolecule catabolic process,GO:0031160 spore wall";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.1 Class I,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="sleL,yaaH";derives_from=BSGatlas-gene-29 basu168 BSGatlas UTR 25152 25220 . - . ID=BSGatlas-internal_UTR-12;Parent=BSGatlas-transcript-33;comment="internal_UTR" basu168 BSGatlas UTR 25152 25184 . - . ID=BSGatlas-5'UTR-15;Parent=BSGatlas-transcript-32;comment="5'UTR" basu168 BSGatlas gene 25221 25766 . - . ID=BSGatlas-gene-30;color=#3474B3;Name=yaaI;locus_tag=BSU_00170,BSU00170 basu168 BSGatlas CDS 25221 25766 . - 0 ID=BSGatlas-gene-30_transcribed;color=#3474B3;Name=yaaI;Parent=BSGatlas-transcript-33;comment="putative amidase (isochorismatase family)";ec="3.-.-.-,EC-3.3.2.1";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yaaI";derives_from=BSGatlas-gene-30 basu168 BSGatlas transcript 25657 26732 . + . ID=BSGatlas-transcript-34;color=#FF9900;Parent=BSGatlas-gene-31,BSGatlas-gene-32;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 25657 25851 . + . ID=BSGatlas-5'UTR-16;Parent=BSGatlas-transcript-34;comment="5'UTR" basu168 BSGatlas UTR 25767 25810 . - . ID=BSGatlas-5'UTR-17;Parent=BSGatlas-transcript-33;comment="5'UTR" basu168 BSGatlas gene 25852 26337 . + . ID=BSGatlas-gene-31;color=#1E90FF;Name=yaaJ;locus_tag=BSU_00180,BSU00180 basu168 BSGatlas CDS 25852 26337 . + 0 ID=BSGatlas-gene-31_transcribed;color=#1E90FF;Name=yaaJ;Parent=BSGatlas-transcript-34;comment="tRNA specific adenosine A34 deaminase";ec="3.5.4.33,EC-3.5.4";go="GO:0003824 catalytic activity,GO:0008033 tRNA processing,GO:0008270 zinc ion binding,GO:0016787 hydrolase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation";synonyms="tadA,yaaJ";derives_from=BSGatlas-gene-31 basu168 BSGatlas UTR 26338 26378 . + . ID=BSGatlas-internal_UTR-13;Parent=BSGatlas-transcript-34;comment="internal_UTR" basu168 BSGatlas gene 26379 26732 . + . ID=BSGatlas-gene-32;color=#CC0000;Name=scr;locus_tag=BSU_misc_RNA_2,BSU_MISC_RNA_2 basu168 BSGatlas transcript 26379 26732 . + . ID=BSGatlas-transcript-35;color=#FF9900;Parent=BSGatlas-gene-32;comment="Based on: BSGatlas" basu168 BSGatlas SRP 26379 26732 . + . ID=BSGatlas-gene-32_transcribed;color=#CC0000;Name=scr;Parent=BSGatlas-transcript-34,BSGatlas-transcript-35;comment="small cytoplasmic RNA (scRNA, 4.5S RNA), signalrecognition particle-like (SRP) component";kegg_pathways="Protein export (ko03060)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.9 NcRNA,SW 6.9.3 Small cytoplasmatic RNA";synonyms="scr";derives_from=BSGatlas-gene-32 basu168 BSGatlas transcript 26779 30035 . + . ID=BSGatlas-transcript-36;color=#FF9900;Parent=BSGatlas-gene-33,BSGatlas-gene-34,BSGatlas-gene-35,BSGatlas-gene-36,BSGatlas-gene-37;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 26779 26813 . + . ID=BSGatlas-5'UTR-18;Parent=BSGatlas-transcript-36;comment="5'UTR" basu168 BSGatlas gene 26814 28505 . + . ID=BSGatlas-gene-33;color=#1E90FF;Name=dnaX;locus_tag=BSU_00190,BSU00190 basu168 BSGatlas CDS 26814 28505 . + 0 ID=BSGatlas-gene-33_transcribed;color=#1E90FF;Name=dnaX;Parent=BSGatlas-transcript-36;comment="DNA polymerase III subunit tau subunit";ec="2.7.7.7,EC-2.7.7.7";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0003887 DNA-directed DNA polymerase activity,GO:0005524 ATP binding,GO:0006260 DNA replication,GO:0006261 DNA-dependent DNA replication,GO:0009360 DNA polymerase III complex,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0017111 nucleoside-triphosphatase activity";kegg_pathways="DNA replication (ko03030),Homologous recombination (ko03440),Mismatch repair (ko03430)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.1 DNA replication,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="dna-8132,dnaH,dnaX";derives_from=BSGatlas-gene-33 basu168 BSGatlas UTR 28383 28528 . + . ID=BSGatlas-5'UTR-19;comment="5'UTR" basu168 BSGatlas UTR 28506 28528 . + . ID=BSGatlas-internal_UTR-14;Parent=BSGatlas-transcript-36;comment="internal_UTR" basu168 BSGatlas gene 28529 28852 . + . ID=BSGatlas-gene-34;color=#1E90FF;Name=yaaK;locus_tag=BSU_00200,BSU00200 basu168 BSGatlas CDS 28529 28852 . + 0 ID=BSGatlas-gene-34_transcribed;color=#1E90FF;Name=yaaK;Parent=BSGatlas-transcript-36;comment="nucleoid associated protein";go="GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0009295 nucleoid,GO:0043590 bacterial nucleoid";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yaaK";derives_from=BSGatlas-gene-34 basu168 BSGatlas gene 28867 29463 . + . ID=BSGatlas-gene-35;color=#1E90FF;Name=recR;locus_tag=BSU_00210,BSU00210 basu168 BSGatlas CDS 28867 29463 . + 0 ID=BSGatlas-gene-35_transcribed;color=#1E90FF;Name=recR;Parent=BSGatlas-transcript-36;comment="recA filament-DNA complex stabilisation factor";go="GO:0003677 DNA binding,GO:0006281 DNA repair,GO:0006310 DNA recombination,GO:0006974 cellular response to DNA damage stimulus,GO:0046872 metal ion binding";kegg_pathways="Homologous recombination (ko03440)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins";synonyms="recM,recR";derives_from=BSGatlas-gene-35 basu168 BSGatlas UTR 29464 29480 . + . ID=BSGatlas-internal_UTR-15;Parent=BSGatlas-transcript-36;comment="internal_UTR" basu168 BSGatlas gene 29481 29705 . + . ID=BSGatlas-gene-36;color=#1E90FF;Name=yaaL;locus_tag=BSU_00220,BSU00220 basu168 BSGatlas CDS 29481 29705 . + 0 ID=BSGatlas-gene-36_transcribed;color=#1E90FF;Name=yaaL;Parent=BSGatlas-transcript-36;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yaaL";derives_from=BSGatlas-gene-36 basu168 BSGatlas UTR 29706 29771 . + . ID=BSGatlas-internal_UTR-16;Parent=BSGatlas-transcript-36;comment="internal_UTR" basu168 BSGatlas transcript 29744 30035 . + . ID=BSGatlas-transcript-37;color=#FF9900;Parent=BSGatlas-gene-37;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 29744 29771 . + . ID=BSGatlas-5'UTR-20;Parent=BSGatlas-transcript-37;comment="5'UTR" basu168 BSGatlas gene 29772 30035 . + . ID=BSGatlas-gene-37;color=#1E90FF;Name=bofA;locus_tag=BSU_00230,BSU00230 basu168 BSGatlas CDS 29772 30035 . + 0 ID=BSGatlas-gene-37_transcribed;color=#1E90FF;Name=bofA;Parent=BSGatlas-transcript-36,BSGatlas-transcript-37;comment="inhibitor of the pro-sigma(K) processingmachinery";go="GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="bofA";derives_from=BSGatlas-gene-37 basu168 BSGatlas transcript 30085 35395 . + . ID=BSGatlas-transcript-38;color=#FF9900;Parent=BSGatlas-gene-38,BSGatlas-gene-39,BSGatlas-gene-40,BSGatlas-gene-41,BSGatlas-gene-42,BSGatlas-gene-43;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 30085 30278 . + . ID=BSGatlas-5'UTR-21;Parent=BSGatlas-transcript-38;comment="5'UTR" basu168 BSGatlas transcript 30168 35395 . + . ID=BSGatlas-transcript-39;color=#FF9900;Parent=BSGatlas-gene-38,BSGatlas-gene-39,BSGatlas-gene-40,BSGatlas-gene-41,BSGatlas-gene-42,BSGatlas-gene-43;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 30168 30278 . + . ID=BSGatlas-5'UTR-22;Parent=BSGatlas-transcript-39;comment="5'UTR" basu168 BSGatlas gene 30279 31832 . + . ID=BSGatlas-gene-38;color=#CC33FF;Name=rrnA-16S;locus_tag=BSU_rRNA_4,BSU_RRNA_4 basu168 BSGatlas rRNA 30279 31832 . + . ID=BSGatlas-gene-38_transcribed;color=#CC33FF;Name=rrnA-16S;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnA-16S";derives_from=BSGatlas-gene-38 basu168 BSGatlas UTR 31833 31930 . + . ID=BSGatlas-internal_UTR-17;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="internal_UTR" basu168 BSGatlas gene 31931 32008 . + . ID=BSGatlas-gene-39;color=#FFFF00;Name=trnA-Ile;locus_tag=BSU_tRNA_8,BSU_TRNA_8 basu168 BSGatlas tRNA 31931 32008 . + . ID=BSGatlas-gene-39_transcribed;color=#FFFF00;Name=trnA-Ile;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="tRNA-Ile";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnA-Ile";derives_from=BSGatlas-gene-39 basu168 BSGatlas gene 32019 32095 . + . ID=BSGatlas-gene-40;color=#FFFF00;Name=trnA-Ala;locus_tag=BSU_tRNA_9,BSU_TRNA_9 basu168 BSGatlas tRNA 32019 32095 . + . ID=BSGatlas-gene-40_transcribed;color=#FFFF00;Name=trnA-Ala;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="tRNA-Ala";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnA-Ala";derives_from=BSGatlas-gene-40 basu168 BSGatlas UTR 32096 32175 . + . ID=BSGatlas-internal_UTR-18;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="internal_UTR" basu168 BSGatlas gene 32176 35104 . + . ID=BSGatlas-gene-41;color=#CC33FF;Name=rrnA-23S;locus_tag=BSU_rRNA_5,BSU_RRNA_5 basu168 BSGatlas rRNA 32176 35104 . + . ID=BSGatlas-gene-41_transcribed;color=#CC33FF;Name=rrnA-23S;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnA-23S";derives_from=BSGatlas-gene-41 basu168 BSGatlas UTR 35105 35162 . + . ID=BSGatlas-internal_UTR-19;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="internal_UTR" basu168 BSGatlas gene 35163 35230 . + . ID=BSGatlas-gene-42;color=#00FF00;Name=Bacillaceae-1 basu168 BSGatlas sRNA 35163 35230 . + . ID=BSGatlas-gene-42_transcribed;color=#00FF00;Name=Bacillaceae-1;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;derives_from=BSGatlas-gene-42 basu168 BSGatlas gene 35236 35355 . + . ID=BSGatlas-gene-43;color=#CC33FF;Name=rrnA-5S;locus_tag=BSU_rRNA_26,BSU_RRNA_26 basu168 BSGatlas rRNA 35236 35355 . + . ID=BSGatlas-gene-43_transcribed;color=#CC33FF;Name=rrnA-5S;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnA-5S";derives_from=BSGatlas-gene-43 basu168 BSGatlas UTR 35356 35395 . + . ID=BSGatlas-3'UTR-14;Parent=BSGatlas-transcript-38,BSGatlas-transcript-39;comment="3'UTR" basu168 BSGatlas transcript 35460 35753 . + . ID=BSGatlas-transcript-40;color=#FF9900;Parent=BSGatlas-gene-44;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 35460 35530 . + . ID=BSGatlas-5'UTR-23;Parent=BSGatlas-transcript-40;comment="5'UTR" basu168 BSGatlas gene 35531 35725 . + . ID=BSGatlas-gene-44;color=#1E90FF;Name=csfB;locus_tag=BSU_00240,BSU00240 basu168 BSGatlas CDS 35531 35725 . + 0 ID=BSGatlas-gene-44_transcribed;color=#1E90FF;Name=csfB;Parent=BSGatlas-transcript-40;comment="forespore-specific anti-sigma factor";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="csfB,gin,yaaM";derives_from=BSGatlas-gene-44 basu168 BSGatlas UTR 35726 35753 . + . ID=BSGatlas-3'UTR-15;Parent=BSGatlas-transcript-40;comment="3'UTR" basu168 BSGatlas transcript 35797 44799 . + . ID=BSGatlas-transcript-43;color=#FF9900;Parent=BSGatlas-gene-45,BSGatlas-gene-46,BSGatlas-gene-47,BSGatlas-gene-48,BSGatlas-gene-49,BSGatlas-gene-50,BSGatlas-gene-51,BSGatlas-gene-52,BSGatlas-gene-53,BSGatlas-gene-54,BSGatlas-gene-55,BSGatlas-gene-56;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 35797 39162 . + . ID=BSGatlas-transcript-42;color=#FF9900;Parent=BSGatlas-gene-45,BSGatlas-gene-46,BSGatlas-gene-47;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 35797 37638 . + . ID=BSGatlas-transcript-41;color=#FF9900;Parent=BSGatlas-gene-45,BSGatlas-gene-46;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 35797 35844 . + . ID=BSGatlas-5'UTR-24;Parent=BSGatlas-transcript-41,BSGatlas-transcript-42,BSGatlas-transcript-43;comment="5'UTR" basu168 BSGatlas gene 35845 36459 . + . ID=BSGatlas-gene-45;color=#1E90FF;Name=xpaC;locus_tag=BSU_00250,BSU00250 basu168 BSGatlas CDS 35845 36459 . + 0 ID=BSGatlas-gene-45_transcribed;color=#1E90FF;Name=xpaC;Parent=BSGatlas-transcript-41,BSGatlas-transcript-42,BSGatlas-transcript-43;comment="putative phosphatase";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="xpaC";derives_from=BSGatlas-gene-45 basu168 BSGatlas UTR 36460 36477 . + . ID=BSGatlas-internal_UTR-20;Parent=BSGatlas-transcript-41,BSGatlas-transcript-42,BSGatlas-transcript-43;comment="internal_UTR" basu168 BSGatlas gene 36478 37638 . + . ID=BSGatlas-gene-46;color=#1E90FF;Name=yaaN;locus_tag=BSU_00260,BSU00260 basu168 BSGatlas CDS 36478 37638 . + 0 ID=BSGatlas-gene-46_transcribed;color=#1E90FF;Name=yaaN;Parent=BSGatlas-transcript-41,BSGatlas-transcript-42,BSGatlas-transcript-43;comment="putative toxic compound resistance protein";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="yaaN";derives_from=BSGatlas-gene-46 basu168 BSGatlas UTR 37639 37719 . + . ID=BSGatlas-internal_UTR-21;Parent=BSGatlas-transcript-42,BSGatlas-transcript-43;comment="internal_UTR" basu168 BSGatlas gene 37720 39162 . + . ID=BSGatlas-gene-47;color=#1E90FF;Name=yaaO;locus_tag=BSU_00270,BSU00270 basu168 BSGatlas CDS 37720 39162 . + 0 ID=BSGatlas-gene-47_transcribed;color=#1E90FF;Name=yaaO;Parent=BSGatlas-transcript-42,BSGatlas-transcript-43;comment="putative decarboxylase";ec="4.1.1.-,4.1.1.19,EC-4.1.1.18";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016829 lyase activity,GO:0016831 carboxy-lyase activity,GO:0030170 pyridoxal phosphate binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.14 Translation factor modification and maturation,SW 3.3.4 Protein modification,SW 3.3.4.8 Protein modification/ other,SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yaaO";derives_from=BSGatlas-gene-47 basu168 BSGatlas transcript 39112 44799 . + . ID=BSGatlas-transcript-45;color=#FF9900;Parent=BSGatlas-gene-48,BSGatlas-gene-49,BSGatlas-gene-50,BSGatlas-gene-51,BSGatlas-gene-52,BSGatlas-gene-53,BSGatlas-gene-54,BSGatlas-gene-55,BSGatlas-gene-56;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 39112 39158 . + . ID=BSGatlas-5'UTR-25;Parent=BSGatlas-transcript-45;comment="5'UTR" basu168 BSGatlas gene 39159 39797 . + . ID=BSGatlas-gene-48;color=#1E90FF;Name=tmk;locus_tag=BSU_00280,BSU00280 basu168 BSGatlas CDS 39159 39797 . + 0 ID=BSGatlas-gene-48_transcribed;color=#1E90FF;Name=tmk;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45;comment="thymidylate kinase";ec="2.7.4.9,EC-2.7.4.12;EC-2.7.4.13;EC-2.7.4.9";go="GO:0000166 nucleotide binding,GO:0004798 thymidylate kinase activity,GO:0005524 ATP binding,GO:0006233 dTDP biosynthetic process,GO:0006235 dTTP biosynthetic process,GO:0009165 nucleotide biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0046939 nucleotide phosphorylation";kegg_pathways="Metabolic pathways (ko01100),Pyrimidine metabolism (ko00240)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.4 Biosynthesis/ acquisition of pyrimidine nucleotides,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="tmk,yaaP";derives_from=BSGatlas-gene-48 basu168 BSGatlas UTR 39798 39870 . + . ID=BSGatlas-internal_UTR-22;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45;comment="internal_UTR" basu168 BSGatlas transcript 39823 44799 . + . ID=BSGatlas-transcript-47;color=#FF9900;Parent=BSGatlas-gene-49,BSGatlas-gene-50,BSGatlas-gene-51,BSGatlas-gene-52,BSGatlas-gene-53,BSGatlas-gene-54,BSGatlas-gene-55,BSGatlas-gene-56;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 39823 39870 . + . ID=BSGatlas-5'UTR-26;Parent=BSGatlas-transcript-47;comment="5'UTR" basu168 BSGatlas gene 39871 40200 . + . ID=BSGatlas-gene-49;color=#1E90FF;Name=darA;locus_tag=BSU_00290,BSU00290 basu168 BSGatlas CDS 39871 40200 . + 0 ID=BSGatlas-gene-49_transcribed;color=#1E90FF;Name=darA;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="signal transduction receptor, cyclic di-AMPbinding";go="GO:0032559 adenyl ribonucleotide binding";subtiwiki_category="SW 3 Information processing,SW 3.5 Targets of second messengers,SW 3.5.1 Targets of c-di-AMP,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="darA,yaaQ";derives_from=BSGatlas-gene-49 basu168 BSGatlas gene 40213 40653 . + . ID=BSGatlas-gene-50;color=#1E90FF;Name=yaaR;locus_tag=BSU_00300,BSU00300 basu168 BSGatlas CDS 40213 40653 . + 0 ID=BSGatlas-gene-50_transcribed;color=#1E90FF;Name=yaaR;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yaaR";derives_from=BSGatlas-gene-50 basu168 BSGatlas gene 40665 41654 . + . ID=BSGatlas-gene-51;color=#1E90FF;Name=holB;locus_tag=BSU_00310,BSU00310 basu168 BSGatlas CDS 40665 41654 . + 0 ID=BSGatlas-gene-51_transcribed;color=#1E90FF;Name=holB;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="DNA polymerase III clamp loader delta' subunit";ec="2.7.7.7,EC-2.7.7.7";go="GO:0003887 DNA-directed DNA polymerase activity,GO:0006260 DNA replication,GO:0006261 DNA-dependent DNA replication,GO:0008408 3'-5' exonuclease activity,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0090305 nucleic acid phosphodiester bond hydrolysis";kegg_pathways="DNA replication (ko03030),Homologous recombination (ko03440),Mismatch repair (ko03430)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.1 DNA replication,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="holB,yaaS";derives_from=BSGatlas-gene-51 basu168 BSGatlas gene 41657 42484 . + . ID=BSGatlas-gene-52;color=#1E90FF;Name=yaaT;locus_tag=BSU_00320,BSU00320 basu168 BSGatlas CDS 41657 42484 . + 0 ID=BSGatlas-gene-52_transcribed;color=#1E90FF;Name=yaaT;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="subunit of a sporulation, competence and biofilmformation regulatory complex of RNaseY (RicAFT complex /FAD / two [4Fe-4S]2+)";go="GO:0005737 cytoplasm,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0042173 regulation of sporulation resulting in formation of a cellular spore,GO:0045304 regulation of establishment of competence for transformation,GO:1900190 regulation of single-species biofilm formation";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.4 RNases,SW 3.2.4.5 Effectors of RNA degradation,SW 3.4 Regulation of gene expression,SW 3.4.7 phosphorelay,SW 3.4.7.6 Other protein controlling the activity of the phosphorelay,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay,SW 4.2.2.6 Other protein controlling the activity of the phosphorelay";synonyms="ricT,yaaT";derives_from=BSGatlas-gene-52 basu168 BSGatlas gene 42499 42858 . + . ID=BSGatlas-gene-53;color=#1E90FF;Name=yabA;locus_tag=BSU_00330,BSU00330 basu168 BSGatlas CDS 42499 42858 . + 0 ID=BSGatlas-gene-53_transcribed;color=#1E90FF;Name=yabA;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="subunit of the DNA replication complex";go="GO:0005515 protein binding,GO:0006260 DNA replication,GO:0008270 zinc ion binding,GO:0032297 negative regulation of DNA-dependent DNA replication initiation,GO:0042802 identical protein binding,GO:0051289 protein homotetramerization";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.1 DNA replication,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.6 Phosphorylation on a Thr residue";synonyms="yabA";derives_from=BSGatlas-gene-53 basu168 BSGatlas UTR 42859 42916 . + . ID=BSGatlas-internal_UTR-23;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="internal_UTR" basu168 BSGatlas gene 42917 43660 . + . ID=BSGatlas-gene-54;color=#1E90FF;Name=trmN6;locus_tag=BSU_00340,BSU00340 basu168 BSGatlas CDS 42917 43660 . + 0 ID=BSGatlas-gene-54_transcribed;color=#1E90FF;Name=trmN6;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="tRNA1(Val) (adenine(37)-N6)-methyltransferase";ec="2.1.1.223";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation";synonyms="trmN6,yabB";derives_from=BSGatlas-gene-54 basu168 BSGatlas gene 43647 43946 . + . ID=BSGatlas-gene-55;color=#1E90FF;Name=yazA;locus_tag=BSU_00350,BSU00350 basu168 BSGatlas CDS 43647 43946 . + 0 ID=BSGatlas-gene-55_transcribed;color=#1E90FF;Name=yazA;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="putative UvrC-Intron-type (URI) endonuclease";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yazA";derives_from=BSGatlas-gene-55 basu168 BSGatlas gene 43921 44799 . + . ID=BSGatlas-gene-56;color=#1E90FF;Name=yabC;locus_tag=BSU_00360,BSU00360 basu168 BSGatlas CDS 43921 44799 . + 0 ID=BSGatlas-gene-56_transcribed;color=#1E90FF;Name=yabC;Parent=BSGatlas-transcript-43,BSGatlas-transcript-45,BSGatlas-transcript-47;comment="16S rRNA 2'-O-ribose C1402 methyltransferase";ec="2.1.1.198";go="GO:0005737 cytoplasm,GO:0006364 rRNA processing,GO:0008152 metabolic process,GO:0008168 methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.3 rRNA modification and maturation/ based on similarity";synonyms="yabC";derives_from=BSGatlas-gene-56 basu168 BSGatlas transcript 44790 46389 . - . ID=BSGatlas-transcript-52;color=#B37924;Parent=BSGatlas-gene-57;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 44790 45399 . - . ID=BSGatlas-transcript-51;color=#B37924;Parent=BSGatlas-gene-57;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 44790 45221 . - . ID=BSGatlas-transcript-50;color=#B37924;Parent=BSGatlas-gene-57;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 44790 45207 . - . ID=BSGatlas-transcript-49;color=#B37924;Parent=BSGatlas-gene-57;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 44790 44847 . - . ID=BSGatlas-3'UTR-16;Parent=BSGatlas-transcript-49,BSGatlas-transcript-50,BSGatlas-transcript-51,BSGatlas-transcript-52;comment="3'UTR" basu168 BSGatlas gene 44848 45138 . - . ID=BSGatlas-gene-57;color=#3474B3;Name=abrB;locus_tag=BSU_00370,BSU00370 basu168 BSGatlas CDS 44848 45138 . - 0 ID=BSGatlas-gene-57_transcribed;color=#3474B3;Name=abrB;Parent=BSGatlas-transcript-49,BSGatlas-transcript-50,BSGatlas-transcript-51,BSGatlas-transcript-52;comment="transcriptional regulator for transition stategenes (AbrB-SurF)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0043937 regulation of sporulation";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.6 Transition state regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="abrB,cpsX,tolB";derives_from=BSGatlas-gene-57 basu168 BSGatlas UTR 45139 46389 . - . ID=BSGatlas-5'UTR-30;Parent=BSGatlas-transcript-52;comment="5'UTR" basu168 BSGatlas UTR 45139 45399 . - . ID=BSGatlas-5'UTR-29;Parent=BSGatlas-transcript-51;comment="5'UTR" basu168 BSGatlas UTR 45139 45221 . - . ID=BSGatlas-5'UTR-28;Parent=BSGatlas-transcript-50;comment="5'UTR" basu168 BSGatlas UTR 45139 45207 . - . ID=BSGatlas-5'UTR-27;Parent=BSGatlas-transcript-49;comment="5'UTR" basu168 BSGatlas transcript 45524 48473 . + . ID=BSGatlas-transcript-55;color=#FF9900;Parent=BSGatlas-gene-59,BSGatlas-gene-61;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 45524 47686 . + . ID=BSGatlas-transcript-54;color=#FF9900;Parent=BSGatlas-gene-59;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 45524 47627 . + . ID=BSGatlas-transcript-53;color=#FF9900;Parent=BSGatlas-gene-59;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 45524 45632 . + . ID=BSGatlas-5'UTR-31;Parent=BSGatlas-transcript-53,BSGatlas-transcript-54,BSGatlas-transcript-55;comment="5'UTR" basu168 BSGatlas gene 45536 45607 . + . ID=BSGatlas-gene-58;color=#999999;Name=TERMseq-predicted-riboswitch basu168 BSGatlas riboswitch 45536 45607 . + . ID=BSGatlas-gene-58_transcribed;color=#999999;Name=TERMseq-predicted-riboswitch;derives_from=BSGatlas-gene-58 basu168 BSGatlas gene 45633 47627 . + . ID=BSGatlas-gene-59;color=#1E90FF;Name=metS;locus_tag=BSU_00380,BSU00380 basu168 BSGatlas CDS 45633 47627 . + 0 ID=BSGatlas-gene-59_transcribed;color=#1E90FF;Name=metS;Parent=BSGatlas-transcript-53,BSGatlas-transcript-54,BSGatlas-transcript-55;comment="methionyl-tRNA synthetase";ec="6.1.1.10,EC-6.1.1.10";go="GO:0000049 tRNA binding,GO:0000166 nucleotide binding,GO:0003723 RNA binding,GO:0004812 aminoacyl-tRNA ligase activity,GO:0004825 methionine-tRNA ligase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006412 translation,GO:0006418 tRNA aminoacylation for protein translation,GO:0006431 methionyl-tRNA aminoacylation,GO:0016874 ligase activity";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970),Metabolic pathways (ko01100),Selenocompound metabolism (ko00450)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="metS";derives_from=BSGatlas-gene-59 basu168 BSGatlas UTR 47628 47705 . + . ID=BSGatlas-internal_UTR-24;Parent=BSGatlas-transcript-55;comment="internal_UTR" basu168 BSGatlas UTR 47628 47686 . + . ID=BSGatlas-3'UTR-18;Parent=BSGatlas-transcript-54;comment="3'UTR" basu168 BSGatlas gene 47673 50019 . - . ID=BSGatlas-gene-60;color=#8F1D1D;Name=S25;locus_tag=new_47673_50019_c basu168 BSGatlas transcript 47673 50019 . - . ID=BSGatlas-transcript-56;color=#B37924;Parent=BSGatlas-gene-60;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 47673 50019 . - . ID=BSGatlas-gene-60_transcribed;color=#8F1D1D;Name=S25;Parent=BSGatlas-transcript-56;synonyms="S25";derives_from=BSGatlas-gene-60 basu168 BSGatlas gene 47706 48473 . + . ID=BSGatlas-gene-61;color=#1E90FF;Name=yabD;locus_tag=BSU_00390,BSU00390 basu168 BSGatlas CDS 47706 48473 . + 0 ID=BSGatlas-gene-61_transcribed;color=#1E90FF;Name=yabD;Parent=BSGatlas-transcript-55;comment="D-amino acyl-tRNA deacylase";ec="3.1.-.-";go="GO:0000737 DNA catabolic process, endonucleolytic,GO:0004518 nuclease activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters,GO:0046872 metal ion binding,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yabD";derives_from=BSGatlas-gene-61 basu168 BSGatlas transcript 48556 49994 . + . ID=BSGatlas-transcript-58;color=#FF9900;Parent=BSGatlas-gene-62;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 48556 49942 . + . ID=BSGatlas-transcript-57;color=#FF9900;Parent=BSGatlas-gene-62;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 48556 48628 . + . ID=BSGatlas-5'UTR-32;Parent=BSGatlas-transcript-57,BSGatlas-transcript-58;comment="5'UTR" basu168 BSGatlas transcript 48629 49994 . + . ID=BSGatlas-transcript-61;color=#FF9900;Parent=BSGatlas-gene-62;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 48629 49994 . + . ID=BSGatlas-transcript-62;color=#FF9900;Parent=BSGatlas-gene-62;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 48629 49942 . + . ID=BSGatlas-gene-62;color=#1E90FF;Name=yabE;locus_tag=BSU_00400,BSU00400 basu168 BSGatlas transcript 48629 49942 . + . ID=BSGatlas-transcript-59;color=#FF9900;Parent=BSGatlas-gene-62;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 48629 49942 . + . ID=BSGatlas-transcript-60;color=#FF9900;Parent=BSGatlas-gene-62;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas CDS 48629 49942 . + 0 ID=BSGatlas-gene-62_transcribed;color=#1E90FF;Name=yabE;Parent=BSGatlas-transcript-57,BSGatlas-transcript-58,BSGatlas-transcript-59,BSGatlas-transcript-60,BSGatlas-transcript-61,BSGatlas-transcript-62;comment="putative cell wall shaping enzyme";go="GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0009254 peptidoglycan turnover,GO:0019867 outer membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.6 Cell wall/ other/ based on similarity";synonyms="yabE";derives_from=BSGatlas-gene-62 basu168 BSGatlas UTR 49943 49994 . + . ID=BSGatlas-3'UTR-19;Parent=BSGatlas-transcript-58,BSGatlas-transcript-61,BSGatlas-transcript-62;comment="3'UTR" basu168 BSGatlas transcript 49987 51539 . + . ID=BSGatlas-transcript-63;color=#FF9900;Parent=BSGatlas-gene-63,BSGatlas-gene-64;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 49987 50086 . + . ID=BSGatlas-5'UTR-33;Parent=BSGatlas-transcript-63;comment="5'UTR" basu168 BSGatlas transcript 50087 51539 . + . ID=BSGatlas-transcript-64;color=#FF9900;Parent=BSGatlas-gene-63,BSGatlas-gene-64;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 50087 50647 . + . ID=BSGatlas-gene-63;color=#1E90FF;Name=rnmV;locus_tag=BSU_00410,BSU00410 basu168 BSGatlas CDS 50087 50647 . + 0 ID=BSGatlas-gene-63_transcribed;color=#1E90FF;Name=rnmV;Parent=BSGatlas-transcript-63,BSGatlas-transcript-64;comment="ribonuclease M5";ec="3.1.26.8,EC-3.1.26.8";go="GO:0000287 magnesium ion binding,GO:0003723 RNA binding,GO:0004518 nuclease activity,GO:0004519 endonuclease activity,GO:0005737 cytoplasm,GO:0006364 rRNA processing,GO:0016787 hydrolase activity,GO:0019843 rRNA binding,GO:0042254 ribosome biogenesis,GO:0043822 ribonuclease M5 activity,GO:0046872 metal ion binding,GO:0090305 nucleic acid phosphodiester bond hydrolysis,GO:0090501 RNA phosphodiester bond hydrolysis,GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.4 RNases,SW 3.2.4.2 Endoribonucleases,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.2 rRNA modification and maturation";synonyms="rnmV,yabF";derives_from=BSGatlas-gene-63 basu168 BSGatlas gene 50640 51518 . + . ID=BSGatlas-gene-64;color=#1E90FF;Name=ksgA;locus_tag=BSU_00420,BSU00420 basu168 BSGatlas CDS 50640 51518 . + 0 ID=BSGatlas-gene-64_transcribed;color=#1E90FF;Name=ksgA;Parent=BSGatlas-transcript-63,BSGatlas-transcript-64;comment="dimethyladenosine 16S ribosomal RNA transferase";ec="2.1.1.-,EC-2.1.1.182";go="GO:0000179 rRNA (adenine-N6,N6-)-dimethyltransferase activity,GO:0003723 RNA binding,GO:0005737 cytoplasm,GO:0006364 rRNA processing,GO:0008168 methyltransferase activity,GO:0016433 rRNA (adenine) methyltransferase activity,GO:0016740 transferase activity,GO:0031167 rRNA methylation,GO:0032259 methylation,GO:0052908 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.2 rRNA modification and maturation";synonyms="ksgA";derives_from=BSGatlas-gene-64 basu168 BSGatlas UTR 51519 51539 . + . ID=BSGatlas-3'UTR-20;Parent=BSGatlas-transcript-63,BSGatlas-transcript-64;comment="3'UTR" basu168 BSGatlas transcript 51571 52600 . + . ID=BSGatlas-transcript-65;color=#FF9900;Parent=BSGatlas-gene-65;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 51571 51679 . + . ID=BSGatlas-5'UTR-34;Parent=BSGatlas-transcript-65;comment="5'UTR" basu168 BSGatlas gene 51680 52552 . + . ID=BSGatlas-gene-65;color=#1E90FF;Name=yabG;locus_tag=BSU_00430,BSU00430 basu168 BSGatlas CDS 51680 52552 . + 0 ID=BSGatlas-gene-65_transcribed;color=#1E90FF;Name=yabG;Parent=BSGatlas-transcript-65;comment="sporulation-specific protease";go="GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0043593 endospore coat";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.7 Proteolysis,SW 3.3.7.4 Additional proteins involved in proteolysis,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.8 Not yet assigned,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yabG";derives_from=BSGatlas-gene-65 basu168 BSGatlas UTR 52553 52600 . + . ID=BSGatlas-3'UTR-21;Parent=BSGatlas-transcript-65;comment="3'UTR" basu168 BSGatlas transcript 52721 53064 . + . ID=BSGatlas-transcript-69;color=#FF9900;Parent=BSGatlas-gene-66;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 52721 53023 . + . ID=BSGatlas-transcript-68;color=#FF9900;Parent=BSGatlas-gene-66;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 52721 52762 . + . ID=BSGatlas-5'UTR-36;Parent=BSGatlas-transcript-68,BSGatlas-transcript-69;comment="5'UTR" basu168 BSGatlas transcript 52748 53064 . + . ID=BSGatlas-transcript-71;color=#FF9900;Parent=BSGatlas-gene-66;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 52748 53023 . + . ID=BSGatlas-transcript-70;color=#FF9900;Parent=BSGatlas-gene-66;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 52748 52762 . + . ID=BSGatlas-5'UTR-37;Parent=BSGatlas-transcript-70,BSGatlas-transcript-71;comment="5'UTR" basu168 BSGatlas gene 52763 53023 . + . ID=BSGatlas-gene-66;color=#1E90FF;Name=veg;locus_tag=BSU_00440,BSU00440 basu168 BSGatlas CDS 52763 53023 . + 0 ID=BSGatlas-gene-66_transcribed;color=#1E90FF;Name=veg;Parent=BSGatlas-transcript-68,BSGatlas-transcript-69,BSGatlas-transcript-70,BSGatlas-transcript-71;comment="conserved hypothetical protein";go="GO:0005737 cytoplasm,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.2 Biofilm formation,SW 4.1.2.4 Regulation";synonyms="veg";derives_from=BSGatlas-gene-66 basu168 BSGatlas UTR 53024 53064 . + . ID=BSGatlas-3'UTR-22;Parent=BSGatlas-transcript-69,BSGatlas-transcript-71;comment="3'UTR" basu168 BSGatlas transcript 53122 53415 . + . ID=BSGatlas-transcript-72;color=#FF9900;Parent=BSGatlas-gene-67;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 53122 53182 . + . ID=BSGatlas-5'UTR-38;Parent=BSGatlas-transcript-72;comment="5'UTR" basu168 BSGatlas gene 53183 53368 . + . ID=BSGatlas-gene-67;color=#1E90FF;Name=sspF;locus_tag=BSU_00450,BSU00450 basu168 BSGatlas CDS 53183 53368 . + 0 ID=BSGatlas-gene-67_transcribed;color=#1E90FF;Name=sspF;Parent=BSGatlas-transcript-72;comment="small acid-soluble spore protein(alpha/beta-type SASP)";go="GO:0003677 DNA binding,GO:0003690 double-stranded DNA binding,GO:0006265 DNA topological change,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.3 Small acid-soluble spore proteins";synonyms="sspF";derives_from=BSGatlas-gene-67 basu168 BSGatlas gene 53363 55717 . - . ID=BSGatlas-gene-68;color=#8F1D1D;Name=S31;locus_tag=new_53363_55717_c basu168 BSGatlas transcript 53363 55717 . - . ID=BSGatlas-transcript-73;color=#B37924;Parent=BSGatlas-gene-68;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 53363 55717 . - . ID=BSGatlas-gene-68_transcribed;color=#8F1D1D;Name=S31;Parent=BSGatlas-transcript-73;synonyms="S31";derives_from=BSGatlas-gene-68 basu168 BSGatlas UTR 53369 53415 . + . ID=BSGatlas-3'UTR-23;Parent=BSGatlas-transcript-72;comment="3'UTR" basu168 BSGatlas transcript 53469 55720 . + . ID=BSGatlas-transcript-74;color=#FF9900;Parent=BSGatlas-gene-69,BSGatlas-gene-70,BSGatlas-gene-71;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 53469 53515 . + . ID=BSGatlas-5'UTR-39;Parent=BSGatlas-transcript-74;comment="5'UTR" basu168 BSGatlas gene 53516 54385 . + . ID=BSGatlas-gene-69;color=#1E90FF;Name=ispE;locus_tag=BSU_00460,BSU00460 basu168 BSGatlas CDS 53516 54385 . + 0 ID=BSGatlas-gene-69_transcribed;color=#1E90FF;Name=ispE;Parent=BSGatlas-transcript-74;comment="4-(cytidine5'-diphospho)-2-C-methyl-D-erythritol kinase";ec="2.7.1.148,EC-2.7.1.148";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0008299 isoprenoid biosynthetic process,GO:0016114 terpenoid biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway,GO:0050515 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Terpenoid backbone biosynthesis (ko00900)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.2 Biosynthesis of lipids,SW 2.4.2.3 Biosynthesis of isoprenoids,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="ispE,yabH";derives_from=BSGatlas-gene-69 basu168 BSGatlas UTR 54386 54440 . + . ID=BSGatlas-internal_UTR-25;Parent=BSGatlas-transcript-74;comment="internal_UTR" basu168 BSGatlas transcript 54441 55720 . + . ID=BSGatlas-transcript-75;color=#FF9900;Parent=BSGatlas-gene-70,BSGatlas-gene-71;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas gene 54441 55298 . + . ID=BSGatlas-gene-70;color=#1E90FF;Name=purR;locus_tag=BSU_00470,BSU00470 basu168 BSGatlas CDS 54441 55298 . + 0 ID=BSGatlas-gene-70_transcribed;color=#1E90FF;Name=purR;Parent=BSGatlas-transcript-74,BSGatlas-transcript-75;comment="transcriptional regulator of the purinebiosynthesis operon (PurR-pRpp)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0009116 nucleoside metabolic process,GO:0045892 negative regulation of transcription, DNA-templated,GO:0045982 negative regulation of purine nucleobase metabolic process";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="purR,yabI";derives_from=BSGatlas-gene-70 basu168 BSGatlas gene 55295 55672 . + . ID=BSGatlas-gene-71;color=#1E90FF;Name=yabJ;locus_tag=BSU_00480,BSU00480 basu168 BSGatlas CDS 55295 55672 . + 0 ID=BSGatlas-gene-71_transcribed;color=#1E90FF;Name=yabJ;Parent=BSGatlas-transcript-74,BSGatlas-transcript-75;comment="aminoacrylate/iminopropionatehydrolase/deaminase";ec="3.5.99.10";go="GO:0005737 cytoplasm,GO:0008652 cellular amino acid biosynthetic process,GO:0009082 branched-chain amino acid biosynthetic process,GO:0009097 isoleucine biosynthetic process,GO:0009636 response to toxic substance,GO:0016787 hydrolase activity,GO:0019239 deaminase activity,GO:0046360 2-oxobutyrate biosynthetic process";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.12 Biosynthesis/ acquisition of branched-chain amino acids,SW 2.7 Detoxification reactions";synonyms="ridA,yabJ";derives_from=BSGatlas-gene-71 basu168 BSGatlas UTR 55673 55720 . + . ID=BSGatlas-3'UTR-24;Parent=BSGatlas-transcript-74,BSGatlas-transcript-75;comment="3'UTR" basu168 BSGatlas transcript 55830 56234 . + . ID=BSGatlas-transcript-77;color=#FF9900;Parent=BSGatlas-gene-72;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 55830 56159 . + . ID=BSGatlas-transcript-76;color=#FF9900;Parent=BSGatlas-gene-72;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 55830 55865 . + . ID=BSGatlas-5'UTR-40;Parent=BSGatlas-transcript-76,BSGatlas-transcript-77;comment="5'UTR" basu168 BSGatlas transcript 55831 56234 . + . ID=BSGatlas-transcript-79;color=#FF9900;Parent=BSGatlas-gene-72;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 55831 56159 . + . ID=BSGatlas-transcript-78;color=#FF9900;Parent=BSGatlas-gene-72;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 55831 55865 . + . ID=BSGatlas-5'UTR-41;Parent=BSGatlas-transcript-78,BSGatlas-transcript-79;comment="5'UTR" basu168 BSGatlas gene 55866 56159 . + . ID=BSGatlas-gene-72;color=#1E90FF;Name=spoVG;locus_tag=BSU_00490,BSU00490 basu168 BSGatlas CDS 55866 56159 . + 0 ID=BSGatlas-gene-72_transcribed;color=#1E90FF;Name=spoVG;Parent=BSGatlas-transcript-76,BSGatlas-transcript-77,BSGatlas-transcript-78,BSGatlas-transcript-79;comment="regulator required for spore cortex synthesis(stage V sporulation)";go="GO:0000917 division septum assembly,GO:0007049 cell cycle,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0030436 asexual sporulation,GO:0051301 cell division";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.8 Cell division,SW 1.1.8.2 Other genes,SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.2 RNA chaperones,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.3 Sporulation/ other,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="spoVG";derives_from=BSGatlas-gene-72 basu168 BSGatlas UTR 56160 56234 . + . ID=BSGatlas-3'UTR-25;Parent=BSGatlas-transcript-77,BSGatlas-transcript-79;comment="3'UTR" basu168 BSGatlas transcript 56324 64710 . + . ID=BSGatlas-transcript-82;color=#FF9900;Parent=BSGatlas-gene-73,BSGatlas-gene-74,BSGatlas-gene-75,BSGatlas-gene-76,BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: BSGatlas" basu168 BSGatlas transcript 56324 64661 . + . ID=BSGatlas-transcript-81;color=#FF9900;Parent=BSGatlas-gene-73,BSGatlas-gene-74,BSGatlas-gene-75,BSGatlas-gene-76,BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: BSGatlas" basu168 BSGatlas transcript 56324 59445 . + . ID=BSGatlas-transcript-80;color=#FF9900;Parent=BSGatlas-gene-73,BSGatlas-gene-74,BSGatlas-gene-75;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 56324 56351 . + . ID=BSGatlas-5'UTR-42;Parent=BSGatlas-transcript-80,BSGatlas-transcript-81,BSGatlas-transcript-82;comment="5'UTR" basu168 BSGatlas gene 56352 57722 . + . ID=BSGatlas-gene-73;color=#1E90FF;Name=gcaD;locus_tag=BSU_00500,BSU00500 basu168 BSGatlas CDS 56352 57722 . + 0 ID=BSGatlas-gene-73_transcribed;color=#1E90FF;Name=gcaD;Parent=BSGatlas-transcript-80,BSGatlas-transcript-81,BSGatlas-transcript-82;comment="bifunctional glucosamine-1-phosphateN-acetyltransferase/UDP-N-acetylglucosaminepyrophosphorylase";ec="2.3.1.157;2.7.7.23,2.7.7.23,EC-2.3.1.157;EC-2.7.7.23";go="GO:0000287 magnesium ion binding,GO:0000902 cell morphogenesis,GO:0003824 catalytic activity,GO:0003977 UDP-N-acetylglucosamine diphosphorylase activity,GO:0005737 cytoplasm,GO:0006048 UDP-N-acetylglucosamine biosynthetic process,GO:0008152 metabolic process,GO:0008360 regulation of cell shape,GO:0009058 biosynthetic process,GO:0009103 lipopolysaccharide biosynthetic process,GO:0009245 lipid A biosynthetic process,GO:0009252 peptidoglycan biosynthetic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups,GO:0016779 nucleotidyltransferase activity,GO:0019134 glucosamine-1-phosphate N-acetyltransferase activity,GO:0046872 metal ion binding";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Metabolic pathways (ko01100),O-Antigen nucleotide sugar biosynthesis (ko00541)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="gcaD,glmU,tms,tms26";derives_from=BSGatlas-gene-73 basu168 BSGatlas UTR 57723 57744 . + . ID=BSGatlas-internal_UTR-26;Parent=BSGatlas-transcript-80,BSGatlas-transcript-81,BSGatlas-transcript-82;comment="internal_UTR" basu168 BSGatlas gene 57745 58698 . + . ID=BSGatlas-gene-74;color=#1E90FF;Name=prs;locus_tag=BSU_00510,BSU00510 basu168 BSGatlas CDS 57745 58698 . + 0 ID=BSGatlas-gene-74_transcribed;color=#1E90FF;Name=prs;Parent=BSGatlas-transcript-80,BSGatlas-transcript-81,BSGatlas-transcript-82;comment="phosphoribosylpyrophosphate synthetase";ec="2.7.6.1,EC-2.7.6.1";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0004749 ribose phosphate diphosphokinase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006015 5-phosphoribose 1-diphosphate biosynthetic process,GO:0009156 ribonucleoside monophosphate biosynthetic process,GO:0009165 nucleotide biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of amino acids (ko01230),Biosynthesis of secondary metabolites (ko01110),Carbon metabolism (ko01200),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Pentose phosphate pathway (ko00030),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.14 Biosynthesis/ acquisition of histidine,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides,SW 2.5.2.4 Biosynthesis/ acquisition of pyrimidine nucleotides,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="prs";derives_from=BSGatlas-gene-74 basu168 BSGatlas UTR 58699 58782 . + . ID=BSGatlas-internal_UTR-27;Parent=BSGatlas-transcript-80,BSGatlas-transcript-81,BSGatlas-transcript-82;comment="internal_UTR" basu168 BSGatlas transcript 58748 64710 . + . ID=BSGatlas-transcript-86;color=#FF9900;Parent=BSGatlas-gene-75,BSGatlas-gene-76,BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: BSGatlas" basu168 BSGatlas transcript 58748 64661 . + . ID=BSGatlas-transcript-85;color=#FF9900;Parent=BSGatlas-gene-75,BSGatlas-gene-76,BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: BSGatlas" basu168 BSGatlas transcript 58748 60360 . + . ID=BSGatlas-transcript-84;color=#FF9900;Parent=BSGatlas-gene-75,BSGatlas-gene-76,BSGatlas-gene-77;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 58748 59445 . + . ID=BSGatlas-transcript-83;color=#FF9900;Parent=BSGatlas-gene-75;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 58748 58782 . + . ID=BSGatlas-5'UTR-43;Parent=BSGatlas-transcript-83,BSGatlas-transcript-84,BSGatlas-transcript-85,BSGatlas-transcript-86;comment="5'UTR" basu168 BSGatlas gene 58783 59397 . + . ID=BSGatlas-gene-75;color=#1E90FF;Name=ctc;locus_tag=BSU_00520,BSU00520 basu168 BSGatlas CDS 58783 59397 . + 0 ID=BSGatlas-gene-75_transcribed;color=#1E90FF;Name=ctc;Parent=BSGatlas-transcript-80,BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-83,BSGatlas-transcript-84,BSGatlas-transcript-85,BSGatlas-transcript-86;comment="ribosomal protein BL25 (Ctc), binding 5S RNA";go="GO:0000303 response to superoxide,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0006950 response to stress,GO:0008097 5S rRNA binding,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="ctc";derives_from=BSGatlas-gene-75 basu168 BSGatlas UTR 59398 59503 . + . ID=BSGatlas-internal_UTR-28;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-84,BSGatlas-transcript-85,BSGatlas-transcript-86;comment="internal_UTR" basu168 BSGatlas UTR 59398 59445 . + . ID=BSGatlas-3'UTR-26;Parent=BSGatlas-transcript-80,BSGatlas-transcript-83;comment="3'UTR" basu168 BSGatlas transcript 59504 64710 . + . ID=BSGatlas-transcript-88;color=#FF9900;Parent=BSGatlas-gene-76,BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: BSGatlas" basu168 BSGatlas transcript 59504 64661 . + . ID=BSGatlas-transcript-87;color=#FF9900;Parent=BSGatlas-gene-76,BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: BSGatlas" basu168 BSGatlas gene 59504 60070 . + . ID=BSGatlas-gene-76;color=#1E90FF;Name=spoVC;locus_tag=BSU_00530,BSU00530 basu168 BSGatlas CDS 59504 60070 . + 0 ID=BSGatlas-gene-76_transcribed;color=#1E90FF;Name=spoVC;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-84,BSGatlas-transcript-85,BSGatlas-transcript-86,BSGatlas-transcript-87,BSGatlas-transcript-88;comment="peptidyl-tRNA hydrolase";ec="3.1.1.29,EC-3.1.1.29";go="GO:0004045 aminoacyl-tRNA hydrolase activity,GO:0005737 cytoplasm,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.12 Translation/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="pth,spoVC";derives_from=BSGatlas-gene-76 basu168 BSGatlas UTR 60071 60129 . + . ID=BSGatlas-internal_UTR-29;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-84,BSGatlas-transcript-85,BSGatlas-transcript-86,BSGatlas-transcript-87,BSGatlas-transcript-88;comment="internal_UTR" basu168 BSGatlas transcript 60130 64710 . + . ID=BSGatlas-transcript-91;color=#FF9900;Parent=BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 60130 64661 . + . ID=BSGatlas-transcript-90;color=#FF9900;Parent=BSGatlas-gene-77,BSGatlas-gene-78,BSGatlas-gene-79;comment="Based on: SubtiWiki" basu168 BSGatlas gene 60130 60360 . + . ID=BSGatlas-gene-77;color=#1E90FF;Name=fin;locus_tag=BSU_00540,BSU00540 basu168 BSGatlas transcript 60130 60360 . + . ID=BSGatlas-transcript-89;color=#FF9900;Parent=BSGatlas-gene-77;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas CDS 60130 60360 . + 0 ID=BSGatlas-gene-77_transcribed;color=#1E90FF;Name=fin;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-84,BSGatlas-transcript-85,BSGatlas-transcript-86,BSGatlas-transcript-87,BSGatlas-transcript-88,BSGatlas-transcript-89,BSGatlas-transcript-90,BSGatlas-transcript-91;comment="protein required for the switch from F to Gduring sporulation (anti sigma F)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="fin,subA,yabK";derives_from=BSGatlas-gene-77 basu168 BSGatlas UTR 60361 60429 . + . ID=BSGatlas-internal_UTR-30;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-85,BSGatlas-transcript-86,BSGatlas-transcript-87,BSGatlas-transcript-88,BSGatlas-transcript-90,BSGatlas-transcript-91;comment="internal_UTR" basu168 BSGatlas gene 60430 63963 . + . ID=BSGatlas-gene-78;color=#1E90FF;Name=mfd;locus_tag=BSU_00550,BSU00550 basu168 BSGatlas CDS 60430 63963 . + 0 ID=BSGatlas-gene-78_transcribed;color=#1E90FF;Name=mfd;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-85,BSGatlas-transcript-86,BSGatlas-transcript-87,BSGatlas-transcript-88,BSGatlas-transcript-90,BSGatlas-transcript-91;comment="transcription-repair coupling factor";ec="3.6.4.-";go="GO:0000166 nucleotide binding,GO:0000716 transcription-coupled nucleotide-excision repair, DNA damage recognition,GO:0003676 nucleic acid binding,GO:0003677 DNA binding,GO:0003684 damaged DNA binding,GO:0004386 helicase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006281 DNA repair,GO:0006355 regulation of transcription, DNA-templated,GO:0006974 cellular response to DNA damage stimulus,GO:0008026 ATP-dependent helicase activity,GO:0016787 hydrolase activity";kegg_pathways="Nucleotide excision repair (ko03420)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.3 Transcription elongation/ termination";synonyms="mfd";derives_from=BSGatlas-gene-78 basu168 BSGatlas gene 62314 62515 . - . ID=BSGatlas-gene-4776;color=#24B324;Name=Ysr141 basu168 BSGatlas sRNA 62314 62515 . - . ID=BSGatlas-gene-4776_transcribed;color=#24B324;Name=Ysr141;derives_from=BSGatlas-gene-4776 basu168 BSGatlas UTR 63964 64098 . + . ID=BSGatlas-internal_UTR-31;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-85,BSGatlas-transcript-86,BSGatlas-transcript-87,BSGatlas-transcript-88,BSGatlas-transcript-90,BSGatlas-transcript-91;comment="internal_UTR" basu168 BSGatlas transcript 64016 64710 . + . ID=BSGatlas-transcript-93;color=#FF9900;Parent=BSGatlas-gene-79;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 64016 64661 . + . ID=BSGatlas-transcript-92;color=#FF9900;Parent=BSGatlas-gene-79;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 64016 64098 . + . ID=BSGatlas-5'UTR-44;Parent=BSGatlas-transcript-92,BSGatlas-transcript-93;comment="5'UTR" basu168 BSGatlas gene 64099 64635 . + . ID=BSGatlas-gene-79;color=#1E90FF;Name=spoVT;locus_tag=BSU_00560,BSU00560 basu168 BSGatlas CDS 64099 64635 . + 0 ID=BSGatlas-gene-79_transcribed;color=#1E90FF;Name=spoVT;Parent=BSGatlas-transcript-81,BSGatlas-transcript-82,BSGatlas-transcript-85,BSGatlas-transcript-86,BSGatlas-transcript-87,BSGatlas-transcript-88,BSGatlas-transcript-90,BSGatlas-transcript-91,BSGatlas-transcript-92,BSGatlas-transcript-93;comment="transcriptional regulator of sporulation /germination";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="spoVT,yabL";derives_from=BSGatlas-gene-79 basu168 BSGatlas UTR 64636 64710 . + . ID=BSGatlas-3'UTR-28;Parent=BSGatlas-transcript-82,BSGatlas-transcript-86,BSGatlas-transcript-88,BSGatlas-transcript-91,BSGatlas-transcript-93;comment="3'UTR" basu168 BSGatlas UTR 64636 64661 . + . ID=BSGatlas-3'UTR-27;Parent=BSGatlas-transcript-81,BSGatlas-transcript-85,BSGatlas-transcript-87,BSGatlas-transcript-90,BSGatlas-transcript-92;comment="3'UTR" basu168 BSGatlas transcript 64746 70078 . + . ID=BSGatlas-transcript-95;color=#FF9900;Parent=BSGatlas-gene-80,BSGatlas-gene-81,BSGatlas-gene-82,BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 64746 70028 . + . ID=BSGatlas-transcript-94;color=#FF9900;Parent=BSGatlas-gene-80,BSGatlas-gene-81,BSGatlas-gene-82,BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 64746 64816 . + . ID=BSGatlas-5'UTR-45;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95;comment="5'UTR" basu168 BSGatlas gene 64817 66415 . + . ID=BSGatlas-gene-80;color=#1E90FF;Name=yabM;locus_tag=BSU_00570,BSU00570 basu168 BSGatlas CDS 64817 66415 . + 0 ID=BSGatlas-gene-80_transcribed;color=#1E90FF;Name=yabM;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95;comment="putative exporter";go="GO:0000271 polysaccharide biosynthetic process,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yabM";derives_from=BSGatlas-gene-80 basu168 BSGatlas transcript 66322 70078 . + . ID=BSGatlas-transcript-97;color=#FF9900;Parent=BSGatlas-gene-81,BSGatlas-gene-82,BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: BSGatlas" basu168 BSGatlas transcript 66322 70028 . + . ID=BSGatlas-transcript-96;color=#FF9900;Parent=BSGatlas-gene-81,BSGatlas-gene-82,BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: BSGatlas" basu168 BSGatlas UTR 66322 66404 . + . ID=BSGatlas-5'UTR-46;Parent=BSGatlas-transcript-96,BSGatlas-transcript-97;comment="5'UTR" basu168 BSGatlas transcript 66405 70078 . + . ID=BSGatlas-transcript-99;color=#FF9900;Parent=BSGatlas-gene-81,BSGatlas-gene-82,BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: BSGatlas" basu168 BSGatlas transcript 66405 70028 . + . ID=BSGatlas-transcript-98;color=#FF9900;Parent=BSGatlas-gene-81,BSGatlas-gene-82,BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: BSGatlas" basu168 BSGatlas gene 66405 67874 . + . ID=BSGatlas-gene-81;color=#1E90FF;Name=yabN;locus_tag=BSU_00580,BSU00580 basu168 BSGatlas CDS 66405 67874 . + 0 ID=BSGatlas-gene-81_transcribed;color=#1E90FF;Name=yabN;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99;comment="putative fusion methylase and nucleotidepyrophosphohydrolase";go="GO:0008168 methyltransferase activity,GO:0032259 methylation";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yabN";derives_from=BSGatlas-gene-81 basu168 BSGatlas gene 67877 68137 . + . ID=BSGatlas-gene-82;color=#1E90FF;Name=yabO;locus_tag=BSU_00590,BSU00590 basu168 BSGatlas CDS 67877 68137 . + 0 ID=BSGatlas-gene-82_transcribed;color=#1E90FF;Name=yabO;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99;comment="ribosomal RNA binding protein involved in 50Srecycling; heat shock protein";go="GO:0003723 RNA binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.13 Translation/ other/ based on similarity";synonyms="yabO";derives_from=BSGatlas-gene-82 basu168 BSGatlas UTR 68138 68215 . + . ID=BSGatlas-internal_UTR-32;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99;comment="internal_UTR" basu168 BSGatlas transcript 68178 70078 . + . ID=BSGatlas-transcript-101;color=#FF9900;Parent=BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 68178 70028 . + . ID=BSGatlas-transcript-100;color=#FF9900;Parent=BSGatlas-gene-83,BSGatlas-gene-84,BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 68178 68215 . + . ID=BSGatlas-5'UTR-47;Parent=BSGatlas-transcript-100,BSGatlas-transcript-101;comment="5'UTR" basu168 BSGatlas gene 68216 68518 . + . ID=BSGatlas-gene-83;color=#1E90FF;Name=yabP;locus_tag=BSU_00600,BSU00600 basu168 BSGatlas CDS 68216 68518 . + 0 ID=BSGatlas-gene-83_transcribed;color=#1E90FF;Name=yabP;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99,BSGatlas-transcript-100,BSGatlas-transcript-101;comment="spore protein involved in the shaping of thespore coat";go="GO:0005628 prospore membrane,GO:0016020 membrane,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yabP";derives_from=BSGatlas-gene-83 basu168 BSGatlas gene 68515 69150 . + . ID=BSGatlas-gene-84;color=#1E90FF;Name=yabQ;locus_tag=BSU_00610,BSU00610 basu168 BSGatlas CDS 68515 69150 . + 0 ID=BSGatlas-gene-84_transcribed;color=#1E90FF;Name=yabQ;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99,BSGatlas-transcript-100,BSGatlas-transcript-101;comment="membrane protein of the forespore";go="GO:0005628 prospore membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yabQ";derives_from=BSGatlas-gene-84 basu168 BSGatlas transcript 69054 70078 . + . ID=BSGatlas-transcript-103;color=#FF9900;Parent=BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 69054 70028 . + . ID=BSGatlas-transcript-102;color=#FF9900;Parent=BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 69054 69167 . + . ID=BSGatlas-5'UTR-48;Parent=BSGatlas-transcript-102,BSGatlas-transcript-103;comment="5'UTR" basu168 BSGatlas transcript 69105 70078 . + . ID=BSGatlas-transcript-105;color=#FF9900;Parent=BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 69105 70028 . + . ID=BSGatlas-transcript-104;color=#FF9900;Parent=BSGatlas-gene-85,BSGatlas-gene-86;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 69105 69167 . + . ID=BSGatlas-5'UTR-49;Parent=BSGatlas-transcript-104,BSGatlas-transcript-105;comment="5'UTR" basu168 BSGatlas UTR 69151 69167 . + . ID=BSGatlas-internal_UTR-33;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99,BSGatlas-transcript-100,BSGatlas-transcript-101;comment="internal_UTR" basu168 BSGatlas gene 69168 69545 . + . ID=BSGatlas-gene-85;color=#1E90FF;Name=divIC;locus_tag=BSU_00620,BSU00620 basu168 BSGatlas CDS 69168 69545 . + 0 ID=BSGatlas-gene-85_transcribed;color=#1E90FF;Name=divIC;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99,BSGatlas-transcript-100,BSGatlas-transcript-101,BSGatlas-transcript-102,BSGatlas-transcript-103,BSGatlas-transcript-104,BSGatlas-transcript-105;comment="cell-division initiation protein";go="GO:0005515 protein binding,GO:0007049 cell cycle";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.8 Cell division,SW 1.1.8.2 Other genes,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.2 Membrane proteins";synonyms="divIC";derives_from=BSGatlas-gene-85 basu168 BSGatlas UTR 69546 69625 . + . ID=BSGatlas-internal_UTR-34;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99,BSGatlas-transcript-100,BSGatlas-transcript-101,BSGatlas-transcript-102,BSGatlas-transcript-103,BSGatlas-transcript-104,BSGatlas-transcript-105;comment="internal_UTR" basu168 BSGatlas gene 69626 70012 . + . ID=BSGatlas-gene-86;color=#1E90FF;Name=yabR;locus_tag=BSU_00630,BSU00630 basu168 BSGatlas CDS 69626 70012 . + 0 ID=BSGatlas-gene-86_transcribed;color=#1E90FF;Name=yabR;Parent=BSGatlas-transcript-94,BSGatlas-transcript-95,BSGatlas-transcript-96,BSGatlas-transcript-97,BSGatlas-transcript-98,BSGatlas-transcript-99,BSGatlas-transcript-100,BSGatlas-transcript-101,BSGatlas-transcript-102,BSGatlas-transcript-103,BSGatlas-transcript-104,BSGatlas-transcript-105;comment="putative RNA degradation protein;polyribonucleotide nucleotidyltransferase orphosphorylase";ec="2.7.-.-";go="GO:0003723 RNA binding";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yabR";derives_from=BSGatlas-gene-86 basu168 BSGatlas UTR 70013 70078 . + . ID=BSGatlas-3'UTR-30;Parent=BSGatlas-transcript-95,BSGatlas-transcript-97,BSGatlas-transcript-99,BSGatlas-transcript-101,BSGatlas-transcript-103,BSGatlas-transcript-105;comment="3'UTR" basu168 BSGatlas UTR 70013 70028 . + . ID=BSGatlas-3'UTR-29;Parent=BSGatlas-transcript-94,BSGatlas-transcript-96,BSGatlas-transcript-98,BSGatlas-transcript-100,BSGatlas-transcript-102,BSGatlas-transcript-104;comment="3'UTR" basu168 BSGatlas transcript 70156 70257 . + . ID=BSGatlas-transcript-106;color=#FF9900;Parent=BSGatlas-gene-87;comment="Based on: BSGatlas" basu168 BSGatlas UTR 70156 70179 . + . ID=BSGatlas-5'UTR-50;Parent=BSGatlas-transcript-106;comment="5'UTR" basu168 BSGatlas gene 70180 70257 . + . ID=BSGatlas-gene-87;color=#FFFF00;Name=trnSL-Met1;locus_tag=BSU_tRNA_10,BSU_TRNA_10 basu168 BSGatlas tRNA 70180 70257 . + . ID=BSGatlas-gene-87_transcribed;color=#FFFF00;Name=trnSL-Met1;Parent=BSGatlas-transcript-106;comment="tRNA-Met";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Met1";derives_from=BSGatlas-gene-87 basu168 BSGatlas transcript 70266 70601 . + . ID=BSGatlas-transcript-108;color=#FF9900;Parent=BSGatlas-gene-88;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas transcript 70266 70386 . + . ID=BSGatlas-transcript-107;color=#FF9900;Parent=BSGatlas-gene-88;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas gene 70266 70338 . + . ID=BSGatlas-gene-88;color=#FFFF00;Name=trnSL-Glu1;locus_tag=BSU_tRNA_11,BSU_TRNA_11 basu168 BSGatlas tRNA 70266 70338 . + . ID=BSGatlas-gene-88_transcribed;color=#FFFF00;Name=trnSL-Glu1;Parent=BSGatlas-transcript-107,BSGatlas-transcript-108;comment="tRNA-Glu";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Glu1";derives_from=BSGatlas-gene-88 basu168 BSGatlas UTR 70339 70601 . + . ID=BSGatlas-3'UTR-32;Parent=BSGatlas-transcript-108;comment="3'UTR" basu168 BSGatlas UTR 70339 70386 . + . ID=BSGatlas-3'UTR-31;Parent=BSGatlas-transcript-107;comment="3'UTR" basu168 BSGatlas transcript 70509 78953 . + . ID=BSGatlas-transcript-110;color=#FF9900;Parent=BSGatlas-gene-89,BSGatlas-gene-91,BSGatlas-gene-92,BSGatlas-gene-93,BSGatlas-gene-94,BSGatlas-gene-95;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 70509 73021 . + . ID=BSGatlas-transcript-109;color=#FF9900;Parent=BSGatlas-gene-89;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 70509 70537 . + . ID=BSGatlas-5'UTR-51;Parent=BSGatlas-transcript-109,BSGatlas-transcript-110;comment="5'UTR" basu168 BSGatlas gene 70538 73021 . + . ID=BSGatlas-gene-89;color=#1E90FF;Name=spoIIE;locus_tag=BSU_00640,BSU00640 basu168 BSGatlas CDS 70538 73021 . + 0 ID=BSGatlas-gene-89_transcribed;color=#1E90FF;Name=spoIIE;Parent=BSGatlas-transcript-109,BSGatlas-transcript-110;comment="SpoIIAA-phosphate serine phosphatase";ec="3.1.3.16,EC-3.1.3.16";go="GO:0003824 catalytic activity,GO:0004721 phosphoprotein phosphatase activity,GO:0004722 protein serine/threonine phosphatase activity,GO:0005515 protein binding,GO:0005628 prospore membrane,GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0070262 peptidyl-serine dephosphorylation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="spoIIE,spoIIH,spoIIK";derives_from=BSGatlas-gene-89 basu168 BSGatlas gene 71190 71799 . - . ID=BSGatlas-gene-90;color=#8F1D1D;Name=S37;locus_tag=new_71190_71799_c basu168 BSGatlas transcript 71190 71799 . - . ID=BSGatlas-transcript-111;color=#B37924;Parent=BSGatlas-gene-90;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 71190 71799 . - . ID=BSGatlas-gene-90_transcribed;color=#8F1D1D;Name=S37;Parent=BSGatlas-transcript-111;synonyms="S37";derives_from=BSGatlas-gene-90 basu168 BSGatlas transcript 72031 78953 . + . ID=BSGatlas-transcript-112;color=#FF9900;Parent=BSGatlas-gene-91,BSGatlas-gene-92,BSGatlas-gene-93,BSGatlas-gene-94,BSGatlas-gene-95;comment="Based on: BSGatlas" basu168 BSGatlas UTR 72031 73105 . + . ID=BSGatlas-5'UTR-52;Parent=BSGatlas-transcript-112;comment="5'UTR" basu168 BSGatlas UTR 73022 73105 . + . ID=BSGatlas-internal_UTR-35;Parent=BSGatlas-transcript-110;comment="internal_UTR" basu168 BSGatlas transcript 73065 78953 . + . ID=BSGatlas-transcript-113;color=#FF9900;Parent=BSGatlas-gene-91,BSGatlas-gene-92,BSGatlas-gene-93,BSGatlas-gene-94,BSGatlas-gene-95;comment="Based on: BSGatlas" basu168 BSGatlas UTR 73065 73105 . + . ID=BSGatlas-5'UTR-53;Parent=BSGatlas-transcript-113;comment="5'UTR" basu168 BSGatlas gene 73106 73843 . + . ID=BSGatlas-gene-91;color=#1E90FF;Name=yabS;locus_tag=BSU_00650,BSU00650 basu168 BSGatlas CDS 73106 73843 . + 0 ID=BSGatlas-gene-91_transcribed;color=#1E90FF;Name=yabS;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="yabS";derives_from=BSGatlas-gene-91 basu168 BSGatlas gene 73809 74825 . + . ID=BSGatlas-gene-92;color=#1E90FF;Name=yabT;locus_tag=BSU_00660,BSU00660 basu168 BSGatlas CDS 73809 74825 . + 0 ID=BSGatlas-gene-92_transcribed;color=#1E90FF;Name=yabT;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113;comment="serine/threonine-protein kinase";ec="2.7.11.1,EC-2.7.11.21;EC-2.7.11.22;EC-2.7.11.13;EC-2.7.11.1;EC-2.7.11.17;EC-2.7.11.12";go="GO:0000166 nucleotide binding,GO:0004672 protein kinase activity,GO:0004674 protein serine/threonine kinase activity,GO:0005524 ATP binding,GO:0006468 protein phosphorylation,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups,GO:0030428 cell septum,GO:0036290 protein trans-autophosphorylation,GO:0042601 endospore-forming forespore";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yabT";derives_from=BSGatlas-gene-92 basu168 BSGatlas transcript 74385 78953 . + . ID=BSGatlas-transcript-114;color=#FF9900;Parent=BSGatlas-gene-93,BSGatlas-gene-94,BSGatlas-gene-95;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 74385 74928 . + . ID=BSGatlas-5'UTR-54;Parent=BSGatlas-transcript-114;comment="5'UTR" basu168 BSGatlas UTR 74826 74928 . + . ID=BSGatlas-internal_UTR-36;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113;comment="internal_UTR" basu168 BSGatlas transcript 74886 78953 . + . ID=BSGatlas-transcript-115;color=#FF9900;Parent=BSGatlas-gene-93,BSGatlas-gene-94,BSGatlas-gene-95;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 74886 74928 . + . ID=BSGatlas-5'UTR-55;Parent=BSGatlas-transcript-115;comment="5'UTR" basu168 BSGatlas gene 74929 76347 . + . ID=BSGatlas-gene-93;color=#1E90FF;Name=tilS;locus_tag=BSU_00670,BSU00670 basu168 BSGatlas CDS 74929 76347 . + 0 ID=BSGatlas-gene-93_transcribed;color=#1E90FF;Name=tilS;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113,BSGatlas-transcript-114,BSGatlas-transcript-115;comment="tRNA(ile2) lysidine synthetase";ec="6.3.4.19,EC-6.3.4.19";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006400 tRNA modification,GO:0008033 tRNA processing,GO:0016874 ligase activity,GO:0016879 ligase activity, forming carbon-nitrogen bonds";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="mesJ,tilS,yacA";derives_from=BSGatlas-gene-93 basu168 BSGatlas transcript 75749 78953 . + . ID=BSGatlas-transcript-116;color=#FF9900;Parent=BSGatlas-gene-94,BSGatlas-gene-95;comment="Based on: BSGatlas" basu168 BSGatlas UTR 75749 76343 . + . ID=BSGatlas-5'UTR-56;Parent=BSGatlas-transcript-116;comment="5'UTR" basu168 BSGatlas gene 76344 76886 . + . ID=BSGatlas-gene-94;color=#1E90FF;Name=hprT;locus_tag=BSU_00680,BSU00680 basu168 BSGatlas CDS 76344 76886 . + 0 ID=BSGatlas-gene-94_transcribed;color=#1E90FF;Name=hprT;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113,BSGatlas-transcript-114,BSGatlas-transcript-115,BSGatlas-transcript-116;comment="hypoxanthine-guanine phosphoribosyltransferase";ec="2.4.2.8,EC-2.4.2.8";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0004422 hypoxanthine phosphoribosyltransferase activity,GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0006166 purine ribonucleoside salvage,GO:0006168 adenine salvage,GO:0006178 guanine salvage,GO:0009116 nucleoside metabolic process,GO:0016740 transferase activity,GO:0016757 transferase activity, transferring glycosyl groups,GO:0032263 GMP salvage,GO:0032264 IMP salvage,GO:0046100 hypoxanthine metabolic process,GO:0046872 metal ion binding,GO:0052657 guanine phosphoribosyltransferase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.3 Purine salvage and interconversion,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 3.5 Targets of second messengers,SW 3.5.3 Targets of (p)ppGpp,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="hprT";derives_from=BSGatlas-gene-94 basu168 BSGatlas UTR 76887 76983 . + . ID=BSGatlas-internal_UTR-37;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113,BSGatlas-transcript-114,BSGatlas-transcript-115,BSGatlas-transcript-116;comment="internal_UTR" basu168 BSGatlas transcript 76954 78953 . + . ID=BSGatlas-transcript-117;color=#FF9900;Parent=BSGatlas-gene-95;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 76954 76983 . + . ID=BSGatlas-5'UTR-57;Parent=BSGatlas-transcript-117;comment="5'UTR" basu168 BSGatlas gene 76984 78897 . + . ID=BSGatlas-gene-95;color=#1E90FF;Name=ftsH;locus_tag=BSU_00690,BSU00690 basu168 BSGatlas CDS 76984 78897 . + 0 ID=BSGatlas-gene-95_transcribed;color=#1E90FF;Name=ftsH;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113,BSGatlas-transcript-114,BSGatlas-transcript-115,BSGatlas-transcript-116,BSGatlas-transcript-117;comment="ATP-dependent cytoplasmic membrane protease";ec="3.4.24.-";go="GO:0000166 nucleotide binding,GO:0004222 metalloendopeptidase activity,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006508 proteolysis,GO:0006950 response to stress,GO:0007049 cell cycle,GO:0008233 peptidase activity,GO:0008237 metallopeptidase activity,GO:0008270 zinc ion binding,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity,GO:0030163 protein catabolic process,GO:0030428 cell septum,GO:0043934 sporulation,GO:0046872 metal ion binding,GO:0051301 cell division";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.8 Cell division,SW 1.1.8.2 Other genes,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.7 Proteolysis,SW 3.3.7.4 Additional proteins involved in proteolysis,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.2 Biofilm formation,SW 4.1.2.4 Regulation,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 4.3.4 Heat shock proteins,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ftsH";derives_from=BSGatlas-gene-95 basu168 BSGatlas UTR 78898 78953 . + . ID=BSGatlas-3'UTR-33;Parent=BSGatlas-transcript-110,BSGatlas-transcript-112,BSGatlas-transcript-113,BSGatlas-transcript-114,BSGatlas-transcript-115,BSGatlas-transcript-116,BSGatlas-transcript-117;comment="3'UTR" basu168 BSGatlas transcript 79027 82742 . + . ID=BSGatlas-transcript-119;color=#FF9900;Parent=BSGatlas-gene-96,BSGatlas-gene-97,BSGatlas-gene-98,BSGatlas-gene-99;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 79027 80755 . + . ID=BSGatlas-transcript-118;color=#FF9900;Parent=BSGatlas-gene-96,BSGatlas-gene-97;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 79027 79091 . + . ID=BSGatlas-5'UTR-58;Parent=BSGatlas-transcript-118,BSGatlas-transcript-119;comment="5'UTR" basu168 BSGatlas gene 79092 79868 . + . ID=BSGatlas-gene-96;color=#1E90FF;Name=coaX;locus_tag=BSU_00700,BSU00700 basu168 BSGatlas CDS 79092 79868 . + 0 ID=BSGatlas-gene-96_transcribed;color=#1E90FF;Name=coaX;Parent=BSGatlas-transcript-118,BSGatlas-transcript-119;comment="pantothenate kinase type III";ec="2.7.1.33,EC-2.7.1.33";go="GO:0000166 nucleotide binding,GO:0004594 pantothenate kinase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0015937 coenzyme A biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0043169 cation binding,GO:0046872 metal ion binding";kegg_pathways="Metabolic pathways (ko01100),Pantothenate and CoA biosynthesis (ko00770)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.4 Biosynthesis of coenzyme A,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="coaX,yacB";derives_from=BSGatlas-gene-96 basu168 BSGatlas gene 79880 80755 . + . ID=BSGatlas-gene-97;color=#1E90FF;Name=yacC;locus_tag=BSU_00710,BSU00710 basu168 BSGatlas CDS 79880 80755 . + 0 ID=BSGatlas-gene-97_transcribed;color=#1E90FF;Name=yacC;Parent=BSGatlas-transcript-118,BSGatlas-transcript-119;comment="disulfide bond chaperone (heat shock proteinHSP33)";go="GO:0005737 cytoplasm,GO:0006457 protein folding,GO:0051082 unfolded protein binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.3 Chaperone/ protein folding/ based on similarity,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="hslO,yacC";derives_from=BSGatlas-gene-97 basu168 BSGatlas UTR 80756 80801 . + . ID=BSGatlas-internal_UTR-38;Parent=BSGatlas-transcript-119;comment="internal_UTR" basu168 BSGatlas gene 80802 81695 . + . ID=BSGatlas-gene-98;color=#1E90FF;Name=yacD;locus_tag=BSU_00720,BSU00720 basu168 BSGatlas CDS 80802 81695 . + 0 ID=BSGatlas-gene-98_transcribed;color=#1E90FF;Name=yacD;Parent=BSGatlas-transcript-119;comment="putative protein chaperone accessory lipoproteinfactor";go="GO:0000413 protein peptidyl-prolyl isomerization,GO:0003755 peptidyl-prolyl cis-trans isomerase activity,GO:0006457 protein folding,GO:0016853 isomerase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.6 Protein secretion/ based on similarity,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="yacD";derives_from=BSGatlas-gene-98 basu168 BSGatlas transcript 81448 82742 . + . ID=BSGatlas-transcript-120;color=#FF9900;Parent=BSGatlas-gene-99;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 81448 81770 . + . ID=BSGatlas-5'UTR-59;Parent=BSGatlas-transcript-120;comment="5'UTR" basu168 BSGatlas UTR 81696 81770 . + . ID=BSGatlas-internal_UTR-39;Parent=BSGatlas-transcript-119;comment="internal_UTR" basu168 BSGatlas transcript 81731 82742 . + . ID=BSGatlas-transcript-121;color=#FF9900;Parent=BSGatlas-gene-99;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 81731 81770 . + . ID=BSGatlas-5'UTR-60;Parent=BSGatlas-transcript-121;comment="5'UTR" basu168 BSGatlas gene 81771 82697 . + . ID=BSGatlas-gene-99;color=#1E90FF;Name=cysK;locus_tag=BSU_00730,BSU00730 basu168 BSGatlas CDS 81771 82697 . + 0 ID=BSGatlas-gene-99_transcribed;color=#1E90FF;Name=cysK;Parent=BSGatlas-transcript-119,BSGatlas-transcript-120,BSGatlas-transcript-121;comment="cysteine synthase";ec="2.5.1.47,2.5.1.47;4.4.1.1,EC-2.5.1.47";go="GO:0004124 cysteine synthase activity,GO:0006535 cysteine biosynthetic process from serine,GO:0008652 cellular amino acid biosynthetic process,GO:0016740 transferase activity,GO:0019344 cysteine biosynthetic process";kegg_pathways="Biosynthesis of amino acids (ko01230),Biosynthesis of secondary metabolites (ko01110),Carbon metabolism (ko01200),Cysteine and methionine metabolism (ko00270),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Sulfur metabolism (ko00920)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.9 Biosynthesis/ acquisition of cysteine,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 3.4.3 Trigger enzyme,SW 3.4.3.2 Trigger enzymes that control gene expression by protein-protein interaction with transcription factors";synonyms="cysK";derives_from=BSGatlas-gene-99 basu168 BSGatlas UTR 82698 82742 . + . ID=BSGatlas-3'UTR-34;Parent=BSGatlas-transcript-119,BSGatlas-transcript-120,BSGatlas-transcript-121;comment="3'UTR" basu168 BSGatlas transcript 82768 90282 . + . ID=BSGatlas-transcript-123;color=#FF9900;Parent=BSGatlas-gene-100,BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107,BSGatlas-gene-109;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 82768 88694 . + . ID=BSGatlas-transcript-122;color=#FF9900;Parent=BSGatlas-gene-100,BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107;comment="Based on: BSGatlas" basu168 BSGatlas UTR 82768 82863 . + . ID=BSGatlas-5'UTR-61;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123;comment="5'UTR" basu168 BSGatlas transcript 82831 90282 . + . ID=BSGatlas-transcript-125;color=#FF9900;Parent=BSGatlas-gene-100,BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107,BSGatlas-gene-109;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 82831 88694 . + . ID=BSGatlas-transcript-124;color=#FF9900;Parent=BSGatlas-gene-100,BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107;comment="Based on: BSGatlas" basu168 BSGatlas UTR 82831 82863 . + . ID=BSGatlas-5'UTR-62;Parent=BSGatlas-transcript-124,BSGatlas-transcript-125;comment="5'UTR" basu168 BSGatlas gene 82864 84276 . + . ID=BSGatlas-gene-100;color=#1E90FF;Name=pabB;locus_tag=BSU_00740,BSU00740 basu168 BSGatlas CDS 82864 84276 . + 0 ID=BSGatlas-gene-100_transcribed;color=#1E90FF;Name=pabB;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125;comment="4-amino-4-deoxychorismate synthase(para-aminobenzoate synthase)";ec="2.6.1.85";go="GO:0000287 magnesium ion binding,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0016833 oxo-acid-lyase activity,GO:0046654 tetrahydrofolate biosynthetic process,GO:0046656 folic acid biosynthetic process,GO:0046820 4-amino-4-deoxychorismate synthase activity";kegg_pathways="Folate biosynthesis (ko00790)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.5 Biosynthesis of folate";synonyms="pab,pabB";derives_from=BSGatlas-gene-100 basu168 BSGatlas transcript 83692 90282 . + . ID=BSGatlas-transcript-127;color=#FF9900;Parent=BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107,BSGatlas-gene-109;comment="Based on: BSGatlas" basu168 BSGatlas transcript 83692 88694 . + . ID=BSGatlas-transcript-126;color=#FF9900;Parent=BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107;comment="Based on: BSGatlas" basu168 BSGatlas UTR 83692 84289 . + . ID=BSGatlas-5'UTR-63;Parent=BSGatlas-transcript-126,BSGatlas-transcript-127;comment="5'UTR" basu168 BSGatlas transcript 84066 90282 . + . ID=BSGatlas-transcript-129;color=#FF9900;Parent=BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107,BSGatlas-gene-109;comment="Based on: BSGatlas" basu168 BSGatlas transcript 84066 88694 . + . ID=BSGatlas-transcript-128;color=#FF9900;Parent=BSGatlas-gene-101,BSGatlas-gene-102,BSGatlas-gene-103,BSGatlas-gene-104,BSGatlas-gene-105,BSGatlas-gene-106,BSGatlas-gene-107;comment="Based on: BSGatlas" basu168 BSGatlas UTR 84066 84289 . + . ID=BSGatlas-5'UTR-64;Parent=BSGatlas-transcript-128,BSGatlas-transcript-129;comment="5'UTR" basu168 BSGatlas gene 84290 84874 . + . ID=BSGatlas-gene-101;color=#1E90FF;Name=pabA;locus_tag=BSU_00750,BSU00750 basu168 BSGatlas CDS 84290 84874 . + 0 ID=BSGatlas-gene-101_transcribed;color=#1E90FF;Name=pabA;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="4-amino-4-deoxychorismate synthase; anthranilatesynthase (subunit II)";ec="2.6.1.85,2.6.1.85;4.1.3.27,EC-4.1.3.27";go="GO:0000162 tryptophan biosynthetic process,GO:0004049 anthranilate synthase activity,GO:0006541 glutamine metabolic process,GO:0008152 metabolic process,GO:0008652 cellular amino acid biosynthetic process,GO:0009073 aromatic amino acid family biosynthetic process,GO:0016740 transferase activity,GO:0016829 lyase activity,GO:0046654 tetrahydrofolate biosynthetic process,GO:0046656 folic acid biosynthetic process,GO:0046820 4-amino-4-deoxychorismate synthase activity";kegg_pathways="Folate biosynthesis (ko00790)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.13 Biosynthesis/ acquisition of aromatic amino acids,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.5 Biosynthesis of folate";synonyms="pabA,trpG,trpX";derives_from=BSGatlas-gene-101 basu168 BSGatlas gene 84874 85755 . + . ID=BSGatlas-gene-102;color=#1E90FF;Name=pabC;locus_tag=BSU_00760,BSU00760 basu168 BSGatlas CDS 84874 85755 . + 0 ID=BSGatlas-gene-102_transcribed;color=#1E90FF;Name=pabC;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="4-amino-4-deoxychorismate pyruvate-lyase";ec="4.1.3.38,EC-4.1.3.38";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0008696 4-amino-4-deoxychorismate lyase activity,GO:0016829 lyase activity,GO:0046654 tetrahydrofolate biosynthetic process,GO:0046656 folic acid biosynthetic process";kegg_pathways="Folate biosynthesis (ko00790)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.5 Biosynthesis of folate";synonyms="pabC";derives_from=BSGatlas-gene-102 basu168 BSGatlas gene 85737 86594 . + . ID=BSGatlas-gene-103;color=#1E90FF;Name=sul;locus_tag=BSU_00770,BSU00770 basu168 BSGatlas CDS 85737 86594 . + 0 ID=BSGatlas-gene-103_transcribed;color=#1E90FF;Name=sul;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="dihydropteroate synthase";ec="2.5.1.15,EC-2.5.1.15";go="GO:0004156 dihydropteroate synthase activity,GO:0009396 folic acid-containing compound biosynthetic process,GO:0016740 transferase activity,GO:0042558 pteridine-containing compound metabolic process,GO:0044237 cellular metabolic process,GO:0046654 tetrahydrofolate biosynthetic process,GO:0046656 folic acid biosynthetic process,GO:0046677 response to antibiotic,GO:0046872 metal ion binding";kegg_pathways="Folate biosynthesis (ko00790),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.5 Biosynthesis of folate,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="sul";derives_from=BSGatlas-gene-103 basu168 BSGatlas gene 86587 86949 . + . ID=BSGatlas-gene-104;color=#1E90FF;Name=folB;locus_tag=BSU_00780,BSU00780 basu168 BSGatlas CDS 86587 86949 . + 0 ID=BSGatlas-gene-104_transcribed;color=#1E90FF;Name=folB;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="dihydroneopterin aldolase";ec="4.1.2.25,EC-4.1.2.25";go="GO:0004150 dihydroneopterin aldolase activity,GO:0006760 folic acid-containing compound metabolic process,GO:0016829 lyase activity,GO:0046654 tetrahydrofolate biosynthetic process,GO:0046656 folic acid biosynthetic process";kegg_pathways="Folate biosynthesis (ko00790),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.5 Biosynthesis of folate,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="folA,folB,yacE";derives_from=BSGatlas-gene-104 basu168 BSGatlas gene 86946 87449 . + . ID=BSGatlas-gene-105;color=#1E90FF;Name=folK;locus_tag=BSU_00790,BSU00790 basu168 BSGatlas CDS 86946 87449 . + 0 ID=BSGatlas-gene-105_transcribed;color=#1E90FF;Name=folK;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="7,8-dihydro-6-hydroxymethylpterinpyrophosphokinase";ec="2.7.6.3,EC-2.7.6.3";go="GO:0000166 nucleotide binding,GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity,GO:0005524 ATP binding,GO:0009396 folic acid-containing compound biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0046654 tetrahydrofolate biosynthetic process,GO:0046656 folic acid biosynthetic process";kegg_pathways="Folate biosynthesis (ko00790),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.5 Biosynthesis of folate,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="folK";derives_from=BSGatlas-gene-105 basu168 BSGatlas gene 87401 87610 . + . ID=BSGatlas-gene-106;color=#1E90FF;Name=yazB;locus_tag=BSU_00800,BSU00800 basu168 BSGatlas CDS 87401 87610 . + 0 ID=BSGatlas-gene-106_transcribed;color=#1E90FF;Name=yazB;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="putative transcriptional regulator";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yazB";derives_from=BSGatlas-gene-106 basu168 BSGatlas UTR 87611 87633 . + . ID=BSGatlas-internal_UTR-40;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="internal_UTR" basu168 BSGatlas gene 87634 88635 . + . ID=BSGatlas-gene-107;color=#1E90FF;Name=yacF;locus_tag=BSU_00810,BSU00810 basu168 BSGatlas CDS 87634 88635 . + 0 ID=BSGatlas-gene-107_transcribed;color=#1E90FF;Name=yacF;Parent=BSGatlas-transcript-122,BSGatlas-transcript-123,BSGatlas-transcript-124,BSGatlas-transcript-125,BSGatlas-transcript-126,BSGatlas-transcript-127,BSGatlas-transcript-128,BSGatlas-transcript-129;comment="tRNA-dihydrouridine synthase B";ec="1.-.-.-,EC-1.1.1";go="GO:0002943 tRNA dihydrouridine synthesis,GO:0003824 catalytic activity,GO:0008033 tRNA processing,GO:0016491 oxidoreductase activity,GO:0017150 tRNA dihydrouridine synthase activity,GO:0050660 flavin adenine dinucleotide binding,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation";synonyms="dus1,dusB,yacF";derives_from=BSGatlas-gene-107 basu168 BSGatlas gene 88050 89566 . - . ID=BSGatlas-gene-108;color=#8F1D1D;Name=S41;locus_tag=new_88050_89566_c basu168 BSGatlas transcript 88050 89566 . - . ID=BSGatlas-transcript-130;color=#B37924;Parent=BSGatlas-gene-108;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 88050 89566 . - . ID=BSGatlas-gene-108_transcribed;color=#8F1D1D;Name=S41;Parent=BSGatlas-transcript-130;synonyms="S41";derives_from=BSGatlas-gene-108 basu168 BSGatlas UTR 88636 88726 . + . ID=BSGatlas-internal_UTR-41;Parent=BSGatlas-transcript-123,BSGatlas-transcript-125,BSGatlas-transcript-127,BSGatlas-transcript-129;comment="internal_UTR" basu168 BSGatlas UTR 88636 88694 . + . ID=BSGatlas-3'UTR-35;Parent=BSGatlas-transcript-122,BSGatlas-transcript-124,BSGatlas-transcript-126,BSGatlas-transcript-128;comment="3'UTR" basu168 BSGatlas transcript 88727 90282 . + . ID=BSGatlas-transcript-131;color=#FF9900;Parent=BSGatlas-gene-109;comment="Based on: SubtiWiki" basu168 BSGatlas gene 88727 90226 . + . ID=BSGatlas-gene-109;color=#1E90FF;Name=lysS;locus_tag=BSU_00820,BSU00820 basu168 BSGatlas CDS 88727 90226 . + 0 ID=BSGatlas-gene-109_transcribed;color=#1E90FF;Name=lysS;Parent=BSGatlas-transcript-123,BSGatlas-transcript-125,BSGatlas-transcript-127,BSGatlas-transcript-129,BSGatlas-transcript-131;comment="lysyl-tRNA synthetase";ec="6.1.1.6,EC-6.1.1.6";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0003676 nucleic acid binding,GO:0004812 aminoacyl-tRNA ligase activity,GO:0004824 lysine-tRNA ligase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006412 translation,GO:0006418 tRNA aminoacylation for protein translation,GO:0006430 lysyl-tRNA aminoacylation,GO:0016874 ligase activity,GO:0046872 metal ion binding";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="lysS";derives_from=BSGatlas-gene-109 basu168 BSGatlas UTR 90227 90282 . + . ID=BSGatlas-3'UTR-36;Parent=BSGatlas-transcript-123,BSGatlas-transcript-125,BSGatlas-transcript-127,BSGatlas-transcript-129,BSGatlas-transcript-131;comment="3'UTR" basu168 BSGatlas transcript 90318 96221 . + . ID=BSGatlas-transcript-132;color=#FF9900;Parent=BSGatlas-gene-110,BSGatlas-gene-111,BSGatlas-gene-112,BSGatlas-gene-113,BSGatlas-gene-114,BSGatlas-gene-115,BSGatlas-gene-116,BSGatlas-gene-117,BSGatlas-gene-118,BSGatlas-gene-119,BSGatlas-gene-120,BSGatlas-gene-121;comment="Based on: BsubCyc" basu168 BSGatlas UTR 90318 90535 . + . ID=BSGatlas-5'UTR-65;Parent=BSGatlas-transcript-132;comment="5'UTR" basu168 BSGatlas gene 90536 92089 . + . ID=BSGatlas-gene-110;color=#CC33FF;Name=rrnJ-16S;locus_tag=BSU_rRNA_6,BSU_RRNA_6 basu168 BSGatlas rRNA 90536 92089 . + . ID=BSGatlas-gene-110_transcribed;color=#CC33FF;Name=rrnJ-16S;Parent=BSGatlas-transcript-132;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnJ-16S";derives_from=BSGatlas-gene-110 basu168 BSGatlas UTR 92090 92252 . + . ID=BSGatlas-internal_UTR-42;Parent=BSGatlas-transcript-132;comment="internal_UTR" basu168 BSGatlas gene 92253 95181 . + . ID=BSGatlas-gene-111;color=#CC33FF;Name=rrnJ-23S;locus_tag=BSU_rRNA_7,BSU_RRNA_7 basu168 BSGatlas rRNA 92253 95181 . + . ID=BSGatlas-gene-111_transcribed;color=#CC33FF;Name=rrnJ-23S;Parent=BSGatlas-transcript-132;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnJ-23S";derives_from=BSGatlas-gene-111 basu168 BSGatlas UTR 95182 95235 . + . ID=BSGatlas-internal_UTR-43;Parent=BSGatlas-transcript-132;comment="internal_UTR" basu168 BSGatlas gene 95236 95354 . + . ID=BSGatlas-gene-112;color=#CC33FF;Name=rrnJ-5S;locus_tag=BSU_rRNA_8,BSU_RRNA_8 basu168 BSGatlas rRNA 95236 95354 . + . ID=BSGatlas-gene-112_transcribed;color=#CC33FF;Name=rrnJ-5S;Parent=BSGatlas-transcript-132;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnJ-5S";derives_from=BSGatlas-gene-112 basu168 BSGatlas UTR 95355 95373 . + . ID=BSGatlas-internal_UTR-44;Parent=BSGatlas-transcript-132;comment="internal_UTR" basu168 BSGatlas gene 95374 95450 . + . ID=BSGatlas-gene-113;color=#FFFF00;Name=trnJ-Val;locus_tag=BSU_tRNA_12,BSU_TRNA_12 basu168 BSGatlas tRNA 95374 95450 . + . ID=BSGatlas-gene-113_transcribed;color=#FFFF00;Name=trnJ-Val;Parent=BSGatlas-transcript-132;comment="tRNA-Val";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Val";derives_from=BSGatlas-gene-113 basu168 BSGatlas gene 95454 95530 . + . ID=BSGatlas-gene-114;color=#FFFF00;Name=trnJ-Thr;locus_tag=BSU_tRNA_13,BSU_TRNA_13 basu168 BSGatlas tRNA 95454 95530 . + . ID=BSGatlas-gene-114_transcribed;color=#FFFF00;Name=trnJ-Thr;Parent=BSGatlas-transcript-132;comment="tRNA-Thr";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Thr";derives_from=BSGatlas-gene-114 basu168 BSGatlas UTR 95531 95565 . + . ID=BSGatlas-internal_UTR-45;Parent=BSGatlas-transcript-132;comment="internal_UTR" basu168 BSGatlas gene 95566 95642 . + . ID=BSGatlas-gene-115;color=#FFFF00;Name=trnJ-Lys;locus_tag=BSU_tRNA_14,BSU_TRNA_14 basu168 BSGatlas tRNA 95566 95642 . + . ID=BSGatlas-gene-115_transcribed;color=#FFFF00;Name=trnJ-Lys;Parent=BSGatlas-transcript-132;comment="tRNA-Lys";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Lys";derives_from=BSGatlas-gene-115 basu168 BSGatlas gene 95648 95731 . + . ID=BSGatlas-gene-116;color=#FFFF00;Name=trnJ-Leu1;locus_tag=BSU_tRNA_15,BSU_TRNA_15 basu168 BSGatlas tRNA 95648 95731 . + . ID=BSGatlas-gene-116_transcribed;color=#FFFF00;Name=trnJ-Leu1;Parent=BSGatlas-transcript-132;comment="tRNA-Leu";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Leu1";derives_from=BSGatlas-gene-116 basu168 BSGatlas UTR 95732 95770 . + . ID=BSGatlas-internal_UTR-46;Parent=BSGatlas-transcript-132;comment="internal_UTR" basu168 BSGatlas gene 95771 95846 . + . ID=BSGatlas-gene-117;color=#FFFF00;Name=trnJ-Gly;locus_tag=BSU_tRNA_16,BSU_TRNA_16 basu168 BSGatlas tRNA 95771 95846 . + . ID=BSGatlas-gene-117_transcribed;color=#FFFF00;Name=trnJ-Gly;Parent=BSGatlas-transcript-132;comment="tRNA-Gly";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Gly";derives_from=BSGatlas-gene-117 basu168 BSGatlas gene 95860 95946 . + . ID=BSGatlas-gene-118;color=#FFFF00;Name=trnJ-Leu2;locus_tag=BSU_tRNA_17,BSU_TRNA_17 basu168 BSGatlas tRNA 95860 95946 . + . ID=BSGatlas-gene-118_transcribed;color=#FFFF00;Name=trnJ-Leu2;Parent=BSGatlas-transcript-132;comment="tRNA-Leu";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Leu2";derives_from=BSGatlas-gene-118 basu168 BSGatlas gene 95955 96032 . + . ID=BSGatlas-gene-119;color=#FFFF00;Name=trnJ-Arg;locus_tag=BSU_tRNA_18,BSU_TRNA_18 basu168 BSGatlas tRNA 95955 96032 . + . ID=BSGatlas-gene-119_transcribed;color=#FFFF00;Name=trnJ-Arg;Parent=BSGatlas-transcript-132;comment="tRNA-Arg";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Arg";derives_from=BSGatlas-gene-119 basu168 BSGatlas UTR 96033 96058 . + . ID=BSGatlas-internal_UTR-47;Parent=BSGatlas-transcript-132;comment="internal_UTR" basu168 BSGatlas gene 96059 96136 . + . ID=BSGatlas-gene-120;color=#FFFF00;Name=trnJ-Pro;locus_tag=BSU_tRNA_19,BSU_TRNA_19 basu168 BSGatlas tRNA 96059 96136 . + . ID=BSGatlas-gene-120_transcribed;color=#FFFF00;Name=trnJ-Pro;Parent=BSGatlas-transcript-132;comment="tRNA-Pro";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Pro";derives_from=BSGatlas-gene-120 basu168 BSGatlas gene 96145 96221 . + . ID=BSGatlas-gene-121;color=#FFFF00;Name=trnJ-Ala;locus_tag=BSU_tRNA_20,BSU_TRNA_20 basu168 BSGatlas tRNA 96145 96221 . + . ID=BSGatlas-gene-121_transcribed;color=#FFFF00;Name=trnJ-Ala;Parent=BSGatlas-transcript-132;comment="tRNA-Ala";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnJ-Ala";derives_from=BSGatlas-gene-121 basu168 BSGatlas gene 96392 97945 . + . ID=BSGatlas-gene-122;color=#CC33FF;Name=rrnW-16S;locus_tag=BSU_rRNA_9,BSU_RRNA_9 basu168 BSGatlas rRNA 96392 97945 . + . ID=BSGatlas-gene-122_transcribed;color=#CC33FF;Name=rrnW-16S;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnW-16S";derives_from=BSGatlas-gene-122 basu168 BSGatlas gene 98109 101037 . + . ID=BSGatlas-gene-123;color=#CC33FF;Name=rrnW-23S;locus_tag=BSU_rRNA_10,BSU_RRNA_10 basu168 BSGatlas rRNA 98109 101037 . + . ID=BSGatlas-gene-123_transcribed;color=#CC33FF;Name=rrnW-23S;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnW-23S";derives_from=BSGatlas-gene-123 basu168 BSGatlas gene 101092 101211 . + . ID=BSGatlas-gene-124;color=#CC33FF;Name=rrnW-5S;locus_tag=BSU_rRNA_11,BSU_RRNA_11 basu168 BSGatlas rRNA 101092 101211 . + . ID=BSGatlas-gene-124_transcribed;color=#CC33FF;Name=rrnW-5S;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnW-5S";derives_from=BSGatlas-gene-124 basu168 BSGatlas transcript 101291 108614 . + . ID=BSGatlas-transcript-134;color=#FF9900;Parent=BSGatlas-gene-125,BSGatlas-gene-126,BSGatlas-gene-127,BSGatlas-gene-128,BSGatlas-gene-129,BSGatlas-gene-130;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 101291 106021 . + . ID=BSGatlas-transcript-133;color=#FF9900;Parent=BSGatlas-gene-125,BSGatlas-gene-126,BSGatlas-gene-127,BSGatlas-gene-128;comment="Based on: BSGatlas" basu168 BSGatlas UTR 101291 101448 . + . ID=BSGatlas-5'UTR-66;Parent=BSGatlas-transcript-133,BSGatlas-transcript-134;comment="5'UTR" basu168 BSGatlas transcript 101360 108614 . + . ID=BSGatlas-transcript-136;color=#FF9900;Parent=BSGatlas-gene-125,BSGatlas-gene-126,BSGatlas-gene-127,BSGatlas-gene-128,BSGatlas-gene-129,BSGatlas-gene-130;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 101360 106021 . + . ID=BSGatlas-transcript-135;color=#FF9900;Parent=BSGatlas-gene-125,BSGatlas-gene-126,BSGatlas-gene-127,BSGatlas-gene-128;comment="Based on: BSGatlas" basu168 BSGatlas UTR 101360 101448 . + . ID=BSGatlas-5'UTR-67;Parent=BSGatlas-transcript-135,BSGatlas-transcript-136;comment="5'UTR" basu168 BSGatlas transcript 101409 108614 . + . ID=BSGatlas-transcript-138;color=#FF9900;Parent=BSGatlas-gene-125,BSGatlas-gene-126,BSGatlas-gene-127,BSGatlas-gene-128,BSGatlas-gene-129,BSGatlas-gene-130;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 101409 106021 . + . ID=BSGatlas-transcript-137;color=#FF9900;Parent=BSGatlas-gene-125,BSGatlas-gene-126,BSGatlas-gene-127,BSGatlas-gene-128;comment="Based on: BSGatlas" basu168 BSGatlas UTR 101409 101448 . + . ID=BSGatlas-5'UTR-68;Parent=BSGatlas-transcript-137,BSGatlas-transcript-138;comment="5'UTR" basu168 BSGatlas gene 101449 101913 . + . ID=BSGatlas-gene-125;color=#1E90FF;Name=ctsR;locus_tag=BSU_00830,BSU00830 basu168 BSGatlas CDS 101449 101913 . + 0 ID=BSGatlas-gene-125_transcribed;color=#1E90FF;Name=ctsR;Parent=BSGatlas-transcript-133,BSGatlas-transcript-134,BSGatlas-transcript-135,BSGatlas-transcript-136,BSGatlas-transcript-137,BSGatlas-transcript-138;comment="transcriptional regulator of class III stressgenes";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0006950 response to stress";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.7 Proteolysis,SW 3.3.7.4 Additional proteins involved in proteolysis,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.4 Heat shock proteins,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="ctsR,yacG";derives_from=BSGatlas-gene-125 basu168 BSGatlas gene 101927 102484 . + . ID=BSGatlas-gene-126;color=#1E90FF;Name=mcsA;locus_tag=BSU_00840,BSU00840 basu168 BSGatlas CDS 101927 102484 . + 0 ID=BSGatlas-gene-126_transcribed;color=#1E90FF;Name=mcsA;Parent=BSGatlas-transcript-133,BSGatlas-transcript-134,BSGatlas-transcript-135,BSGatlas-transcript-136,BSGatlas-transcript-137,BSGatlas-transcript-138;comment="activator of protein kinase McsB";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.4 Heat shock proteins,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="mcsA,yacH";derives_from=BSGatlas-gene-126 basu168 BSGatlas gene 102484 103575 . + . ID=BSGatlas-gene-127;color=#1E90FF;Name=mcsB;locus_tag=BSU_00850,BSU00850 basu168 BSGatlas CDS 102484 103575 . + 0 ID=BSGatlas-gene-127_transcribed;color=#1E90FF;Name=mcsB;Parent=BSGatlas-transcript-133,BSGatlas-transcript-134,BSGatlas-transcript-135,BSGatlas-transcript-136,BSGatlas-transcript-137,BSGatlas-transcript-138;comment="protein arginine kinase";ec="2.7.3.3,EC-2.7.14.1";go="GO:0000166 nucleotide binding,GO:0003824 catalytic activity,GO:0005524 ATP binding,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016775 phosphotransferase activity, nitrogenous group as acceptor,GO:0018109 peptidyl-arginine phosphorylation,GO:1990424 protein arginine kinase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.4 Heat shock proteins";synonyms="mcsB,yacI";derives_from=BSGatlas-gene-127 basu168 BSGatlas gene 103572 106004 . + . ID=BSGatlas-gene-128;color=#1E90FF;Name=clpC;locus_tag=BSU_00860,BSU00860 basu168 BSGatlas CDS 103572 106004 . + 0 ID=BSGatlas-gene-128_transcribed;color=#1E90FF;Name=clpC;Parent=BSGatlas-transcript-133,BSGatlas-transcript-134,BSGatlas-transcript-135,BSGatlas-transcript-136,BSGatlas-transcript-137,BSGatlas-transcript-138;comment="class III stress response-related ATPase, AAA+superfamily";go="GO:0000166 nucleotide binding,GO:0005515 protein binding,GO:0005524 ATP binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0017111 nucleoside-triphosphatase activity,GO:0019538 protein metabolic process,GO:0030420 establishment of competence for transformation";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.5 Cell wall/ other,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.7 Proteolysis,SW 3.3.7.4 Additional proteins involved in proteolysis,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.4 Heat shock proteins,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="clpC,mecB";derives_from=BSGatlas-gene-128 basu168 BSGatlas UTR 106005 106095 . + . ID=BSGatlas-internal_UTR-48;Parent=BSGatlas-transcript-134,BSGatlas-transcript-136,BSGatlas-transcript-138;comment="internal_UTR" basu168 BSGatlas UTR 106005 106021 . + . ID=BSGatlas-3'UTR-37;Parent=BSGatlas-transcript-133,BSGatlas-transcript-135,BSGatlas-transcript-137;comment="3'UTR" basu168 BSGatlas transcript 106096 108614 . + . ID=BSGatlas-transcript-139;color=#FF9900;Parent=BSGatlas-gene-129,BSGatlas-gene-130;comment="Based on: BSGatlas" basu168 BSGatlas gene 106096 107472 . + . ID=BSGatlas-gene-129;color=#1E90FF;Name=radA;locus_tag=BSU_00870,BSU00870 basu168 BSGatlas CDS 106096 107472 . + 0 ID=BSGatlas-gene-129_transcribed;color=#1E90FF;Name=radA;Parent=BSGatlas-transcript-134,BSGatlas-transcript-136,BSGatlas-transcript-138,BSGatlas-transcript-139;comment="DNA repair protein; 6-O-methylguanine-DNAmethyltransferase";ec="2.1.1.63,EC-2.1.1.63";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0003684 damaged DNA binding,GO:0005524 ATP binding,GO:0006259 DNA metabolic process,GO:0006281 DNA repair,GO:0006974 cellular response to DNA damage stimulus,GO:0008094 DNA-dependent ATPase activity,GO:0017111 nucleoside-triphosphatase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.3 Metabolism of signalling nucleotides,SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.4 Heat shock proteins";synonyms="radA,sms,yacJ";derives_from=BSGatlas-gene-129 basu168 BSGatlas transcript 107476 108614 . + . ID=BSGatlas-transcript-140;color=#FF9900;Parent=BSGatlas-gene-130;comment="Based on: SubtiWiki" basu168 BSGatlas gene 107476 108558 . + . ID=BSGatlas-gene-130;color=#1E90FF;Name=disA;locus_tag=BSU_00880,BSU00880 basu168 BSGatlas CDS 107476 108558 . + 0 ID=BSGatlas-gene-130_transcribed;color=#1E90FF;Name=disA;Parent=BSGatlas-transcript-134,BSGatlas-transcript-136,BSGatlas-transcript-138,BSGatlas-transcript-139,BSGatlas-transcript-140;comment="diadenylate cyclase; DNA integrity scanningprotein; cell cycle checkpoint DNA scanning protein";ec="2.7.7.85,EC-2.7.7.85";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0003684 damaged DNA binding,GO:0005524 ATP binding,GO:0006281 DNA repair,GO:0006974 cellular response to DNA damage stimulus,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0019932 second-messenger-mediated signaling,GO:0072421 detection of DNA damage stimulus involved in DNA damage checkpoint";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.8 Cell division,SW 1.1.8.2 Other genes,SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.3 Metabolism of signalling nucleotides,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.3 Sporulation/ other,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 4.3.4 Heat shock proteins";synonyms="disA,yacK";derives_from=BSGatlas-gene-130 basu168 BSGatlas UTR 108559 108614 . + . ID=BSGatlas-3'UTR-38;Parent=BSGatlas-transcript-134,BSGatlas-transcript-136,BSGatlas-transcript-138,BSGatlas-transcript-139,BSGatlas-transcript-140;comment="3'UTR" basu168 BSGatlas transcript 108598 110956 . + . ID=BSGatlas-transcript-141;color=#FF9900;Parent=BSGatlas-gene-131,BSGatlas-gene-132,BSGatlas-gene-133;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 108598 108673 . + . ID=BSGatlas-5'UTR-69;Parent=BSGatlas-transcript-141;comment="5'UTR" basu168 BSGatlas gene 108674 109774 . + . ID=BSGatlas-gene-131;color=#1E90FF;Name=yacL;locus_tag=BSU_00890,BSU00890 basu168 BSGatlas CDS 108674 109774 . + 0 ID=BSGatlas-gene-131_transcribed;color=#1E90FF;Name=yacL;Parent=BSGatlas-transcript-141;comment="putative membrane protein possibly involved inRNA binding";go="GO:0004518 nuclease activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0046872 metal ion binding,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="yacL";derives_from=BSGatlas-gene-131 basu168 BSGatlas gene 109789 110487 . + . ID=BSGatlas-gene-132;color=#1E90FF;Name=ispD;locus_tag=BSU_00900,BSU00900 basu168 BSGatlas CDS 109789 110487 . + 0 ID=BSGatlas-gene-132_transcribed;color=#1E90FF;Name=ispD;Parent=BSGatlas-transcript-141;comment="2-C-methyl-D-erythritol 4-phosphatecytidylyltransferase, nonmevalonate isoprenoid pathway";ec="2.7.7.60,EC-2.7.7.60";go="GO:0003824 catalytic activity,GO:0008299 isoprenoid biosynthetic process,GO:0016114 terpenoid biosynthetic process,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway,GO:0050518 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Terpenoid backbone biosynthesis (ko00900)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.2 Biosynthesis of lipids,SW 2.4.2.3 Biosynthesis of isoprenoids,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="ispD,yacM";derives_from=BSGatlas-gene-132 basu168 BSGatlas gene 110480 110956 . + . ID=BSGatlas-gene-133;color=#1E90FF;Name=ispF;locus_tag=BSU_00910,BSU00910 basu168 BSGatlas CDS 110480 110956 . + 0 ID=BSGatlas-gene-133_transcribed;color=#1E90FF;Name=ispF;Parent=BSGatlas-transcript-141;comment="2-C-methyl-D-erythritol-2,4-cyclodiphosphatesynthase";ec="4.6.1.12,EC-4.6.1.12";go="GO:0008299 isoprenoid biosynthetic process,GO:0008685 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity,GO:0016114 terpenoid biosynthetic process,GO:0016829 lyase activity,GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Terpenoid backbone biosynthesis (ko00900)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.2 Biosynthesis of lipids,SW 2.4.2.3 Biosynthesis of isoprenoids,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="ispF,yacN";derives_from=BSGatlas-gene-133 basu168 BSGatlas transcript 111003 116537 . + . ID=BSGatlas-transcript-143;color=#FF9900;Parent=BSGatlas-gene-134,BSGatlas-gene-135,BSGatlas-gene-136,BSGatlas-gene-137,BSGatlas-gene-138,BSGatlas-gene-139,BSGatlas-gene-140;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 111003 112766 . + . ID=BSGatlas-transcript-142;color=#FF9900;Parent=BSGatlas-gene-134,BSGatlas-gene-135;comment="Based on: BSGatlas" basu168 BSGatlas UTR 111003 111046 . + . ID=BSGatlas-5'UTR-70;Parent=BSGatlas-transcript-142,BSGatlas-transcript-143;comment="5'UTR" basu168 BSGatlas gene 111047 112498 . + . ID=BSGatlas-gene-134;color=#1E90FF;Name=gltX;locus_tag=BSU_00920,BSU00920 basu168 BSGatlas CDS 111047 112498 . + 0 ID=BSGatlas-gene-134_transcribed;color=#1E90FF;Name=gltX;Parent=BSGatlas-transcript-142,BSGatlas-transcript-143;comment="glutamyl-tRNA synthetase";ec="6.1.1.17,6.1.1.24;6.1.1.17,EC-6.1.1.17";go="GO:0000049 tRNA binding,GO:0000166 nucleotide binding,GO:0004812 aminoacyl-tRNA ligase activity,GO:0004818 glutamate-tRNA ligase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006412 translation,GO:0006418 tRNA aminoacylation for protein translation,GO:0006424 glutamyl-tRNA aminoacylation,GO:0016874 ligase activity,GO:0016876 NA,GO:0043039 tRNA aminoacylation,GO:0046872 metal ion binding";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970),Metabolic pathways (ko01100)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="gltX";derives_from=BSGatlas-gene-134 basu168 BSGatlas UTR 111999 112799 . + . ID=BSGatlas-5'UTR-71;comment="5'UTR" basu168 BSGatlas gene 112500 112731 . + . ID=BSGatlas-gene-135;color=#999999;Name=T-box basu168 BSGatlas riboswitch 112500 112731 . + . ID=BSGatlas-gene-135_transcribed;color=#999999;Name=T-box;Parent=BSGatlas-transcript-142,BSGatlas-transcript-143;derives_from=BSGatlas-gene-135 basu168 BSGatlas UTR 112732 112799 . + . ID=BSGatlas-internal_UTR-49;Parent=BSGatlas-transcript-143;comment="internal_UTR" basu168 BSGatlas UTR 112732 112766 . + . ID=BSGatlas-3'UTR-39;Parent=BSGatlas-transcript-142;comment="3'UTR" basu168 BSGatlas gene 112800 113453 . + . ID=BSGatlas-gene-136;color=#1E90FF;Name=cysE;locus_tag=BSU_00930,BSU00930 basu168 BSGatlas CDS 112800 113453 . + 0 ID=BSGatlas-gene-136_transcribed;color=#1E90FF;Name=cysE;Parent=BSGatlas-transcript-143;comment="serine O-acetyltransferase";ec="2.3.1.30,EC-2.3.1.30";go="GO:0005737 cytoplasm,GO:0006535 cysteine biosynthetic process from serine,GO:0008652 cellular amino acid biosynthetic process,GO:0009001 serine O-acetyltransferase activity,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups,GO:0019344 cysteine biosynthetic process";kegg_pathways="Biosynthesis of amino acids (ko01230),Biosynthesis of secondary metabolites (ko01110),Carbon metabolism (ko01200),Cysteine and methionine metabolism (ko00270),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Sulfur metabolism (ko00920)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.9 Biosynthesis/ acquisition of cysteine,SW 3 Information processing,SW 3.1 Genetics,SW 3.1.9 Newly identified competence genes";synonyms="cysA,cysE";derives_from=BSGatlas-gene-136 basu168 BSGatlas gene 113450 114850 . + . ID=BSGatlas-gene-137;color=#1E90FF;Name=cysS;locus_tag=BSU_00940,BSU00940 basu168 BSGatlas CDS 113450 114850 . + 0 ID=BSGatlas-gene-137_transcribed;color=#1E90FF;Name=cysS;Parent=BSGatlas-transcript-143;comment="dual cysteinyl-tRNA synthetase; cysteinepersulfide synthase";ec="6.1.1.16,EC-6.1.1.16";go="GO:0000166 nucleotide binding,GO:0004812 aminoacyl-tRNA ligase activity,GO:0004817 cysteine-tRNA ligase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0006412 translation,GO:0006418 tRNA aminoacylation for protein translation,GO:0006423 cysteinyl-tRNA aminoacylation,GO:0008270 zinc ion binding,GO:0016874 ligase activity,GO:0046872 metal ion binding";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="cysS,snpA";derives_from=BSGatlas-gene-137 basu168 BSGatlas gene 114854 115285 . + . ID=BSGatlas-gene-138;color=#1E90FF;Name=mrnC;locus_tag=BSU_00950,BSU00950 basu168 BSGatlas CDS 114854 115285 . + 0 ID=BSGatlas-gene-138_transcribed;color=#1E90FF;Name=mrnC;Parent=BSGatlas-transcript-143;comment="ribonuclease for 23S RNA maturation, mini-RNaseIII";go="GO:0003723 RNA binding,GO:0004518 nuclease activity,GO:0004519 endonuclease activity,GO:0004525 ribonuclease III activity,GO:0004540 ribonuclease activity,GO:0005737 cytoplasm,GO:0006364 rRNA processing,GO:0006396 RNA processing,GO:0016787 hydrolase activity,GO:0019843 rRNA binding,GO:0042254 ribosome biogenesis,GO:0090305 nucleic acid phosphodiester bond hydrolysis,GO:0090501 RNA phosphodiester bond hydrolysis,GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.4 RNases,SW 3.2.4.2 Endoribonucleases,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.2 rRNA modification and maturation";synonyms="mrnC,yazC";derives_from=BSGatlas-gene-138 basu168 BSGatlas gene 115269 116018 . + . ID=BSGatlas-gene-139;color=#1E90FF;Name=yacO;locus_tag=BSU_00960,BSU00960 basu168 BSGatlas CDS 115269 116018 . + 0 ID=BSGatlas-gene-139_transcribed;color=#1E90FF;Name=yacO;Parent=BSGatlas-transcript-143;comment="23S rRNA (Gm2251)-methyltransferase";ec="2.1.1.-,2.1.1.185";go="GO:0001510 RNA methylation,GO:0003723 RNA binding,GO:0006396 RNA processing,GO:0008168 methyltransferase activity,GO:0008173 RNA methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.2 rRNA modification and maturation";synonyms="rlmB,yacO";derives_from=BSGatlas-gene-139 basu168 BSGatlas gene 116025 116537 . + . ID=BSGatlas-gene-140;color=#1E90FF;Name=yacP;locus_tag=BSU_00970,BSU00970 basu168 BSGatlas CDS 116025 116537 . + 0 ID=BSGatlas-gene-140_transcribed;color=#1E90FF;Name=yacP;Parent=BSGatlas-transcript-143;comment="ribosome-dependent mRNA endonuclease";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.4 RNases,SW 3.2.4.2 Endoribonucleases";synonyms="rae1,yacP";derives_from=BSGatlas-gene-140 basu168 BSGatlas transcript 116575 117711 . + . ID=BSGatlas-transcript-145;color=#FF9900;Parent=BSGatlas-gene-141,BSGatlas-gene-142,BSGatlas-gene-143;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 116575 117256 . + . ID=BSGatlas-transcript-144;color=#FF9900;Parent=BSGatlas-gene-141;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 116575 116599 . + . ID=BSGatlas-5'UTR-72;Parent=BSGatlas-transcript-144,BSGatlas-transcript-145;comment="5'UTR" basu168 BSGatlas gene 116600 117256 . + . ID=BSGatlas-gene-141;color=#1E90FF;Name=sigH;locus_tag=BSU_00980,BSU00980 basu168 BSGatlas CDS 116600 117256 . + 0 ID=BSGatlas-gene-141_transcribed;color=#1E90FF;Name=sigH;Parent=BSGatlas-transcript-144,BSGatlas-transcript-145;comment="RNA polymerase sigma-30 factor (sigma(H))";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006352 DNA-templated transcription, initiation,GO:0006355 regulation of transcription, DNA-templated,GO:0016987 sigma factor activity,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.2 Sigma factors,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.1 Sigma factors";synonyms="sigH,spo0H";derives_from=BSGatlas-gene-141 basu168 BSGatlas UTR 117257 117348 . + . ID=BSGatlas-internal_UTR-50;Parent=BSGatlas-transcript-145;comment="internal_UTR" basu168 BSGatlas gene 117349 117498 . + . ID=BSGatlas-gene-142;color=#1E90FF;Name=rpmGB;locus_tag=BSU_00990,BSU00990 basu168 BSGatlas CDS 117349 117498 . + 0 ID=BSGatlas-gene-142_transcribed;color=#1E90FF;Name=rpmGB;Parent=BSGatlas-transcript-145;comment="ribosomal protein L33";go="GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA,GO:0046677 response to antibiotic";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins";synonyms="rpmG,rpmGB";derives_from=BSGatlas-gene-142 basu168 BSGatlas UTR 117499 117531 . + . ID=BSGatlas-internal_UTR-51;Parent=BSGatlas-transcript-145;comment="internal_UTR" basu168 BSGatlas gene 117532 117711 . + . ID=BSGatlas-gene-143;color=#1E90FF;Name=secE;locus_tag=BSU_01000,BSU01000 basu168 BSGatlas CDS 117532 117711 . + 0 ID=BSGatlas-gene-143_transcribed;color=#1E90FF;Name=secE;Parent=BSGatlas-transcript-145;comment="preprotein translocase subunit";go="GO:0005622 intracellular,GO:0005886 plasma membrane,GO:0006605 protein targeting,GO:0006810 transport,GO:0008565 protein transporter activity,GO:0009306 protein secretion,GO:0015031 protein transport,GO:0015450 P-P-bond-hydrolysis-driven protein transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0043952 protein transport by the Sec complex,GO:0065002 intracellular protein transmembrane transport";kegg_pathways="Bacterial secretion system (ko03070),Protein export (ko03060),Quorum sensing (ko02024)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.2 Membrane proteins";synonyms="secE";derives_from=BSGatlas-gene-143 basu168 BSGatlas gene 117890 118423 . + . ID=BSGatlas-gene-144;color=#1E90FF;Name=nusG;locus_tag=BSU_01010,BSU01010 basu168 BSGatlas CDS 117890 118423 . + 0 ID=BSGatlas-gene-144_transcribed;color=#1E90FF;Name=nusG;comment="RNA polymerase elongation pause factor";go="GO:0006351 transcription, DNA-templated,GO:0006353 DNA-templated transcription, termination,GO:0006354 DNA-templated transcription, elongation,GO:0006355 regulation of transcription, DNA-templated,GO:0031564 transcription antitermination,GO:0032784 regulation of DNA-templated transcription, elongation";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.3 Transcription elongation/ termination";synonyms="nusG";derives_from=BSGatlas-gene-144 basu168 BSGatlas transcript 118452 120978 . + . ID=BSGatlas-transcript-147;color=#FF9900;Parent=BSGatlas-gene-145,BSGatlas-gene-146,BSGatlas-gene-147,BSGatlas-gene-148,BSGatlas-gene-149;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 118452 120978 . + . ID=BSGatlas-transcript-148;color=#FF9900;Parent=BSGatlas-gene-145,BSGatlas-gene-146,BSGatlas-gene-147,BSGatlas-gene-148,BSGatlas-gene-149;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 118452 119995 . + . ID=BSGatlas-transcript-146;color=#FF9900;Parent=BSGatlas-gene-145,BSGatlas-gene-146,BSGatlas-gene-147;comment="Based on: BSGatlas" basu168 BSGatlas UTR 118452 118590 . + . ID=BSGatlas-5'UTR-73;Parent=BSGatlas-transcript-146,BSGatlas-transcript-147,BSGatlas-transcript-148;comment="5'UTR" basu168 BSGatlas gene 118591 119016 . + . ID=BSGatlas-gene-145;color=#1E90FF;Name=rplK;locus_tag=BSU_01020,BSU01020 basu168 BSGatlas CDS 118591 119016 . + 0 ID=BSGatlas-gene-145_transcribed;color=#1E90FF;Name=rplK;Parent=BSGatlas-transcript-146,BSGatlas-transcript-147,BSGatlas-transcript-148;comment="ribosomal protein L11 (BL11)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA,GO:0046677 response to antibiotic,GO:0070180 large ribosomal subunit rRNA binding";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.9 Newly identified competence genes,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.5 Universally conserved proteins";synonyms="relC,rplK,tsp";derives_from=BSGatlas-gene-145 basu168 BSGatlas UTR 119017 119110 . + . ID=BSGatlas-internal_UTR-52;Parent=BSGatlas-transcript-146,BSGatlas-transcript-147,BSGatlas-transcript-148;comment="internal_UTR" basu168 BSGatlas gene 119111 119809 . + . ID=BSGatlas-gene-146;color=#1E90FF;Name=rplA;locus_tag=BSU_01030,BSU01030 basu168 BSGatlas CDS 119111 119809 . + 0 ID=BSGatlas-gene-146_transcribed;color=#1E90FF;Name=rplA;Parent=BSGatlas-transcript-146,BSGatlas-transcript-147,BSGatlas-transcript-148;comment="ribosomal protein L1 (BL1)";go="GO:0000049 tRNA binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005515 protein binding,GO:0005840 ribosome,GO:0006412 translation,GO:0006417 regulation of translation,GO:0015934 large ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins";synonyms="rplA";derives_from=BSGatlas-gene-146 basu168 BSGatlas UTR 119810 119853 . + . ID=BSGatlas-internal_UTR-53;Parent=BSGatlas-transcript-146,BSGatlas-transcript-147,BSGatlas-transcript-148;comment="internal_UTR" basu168 BSGatlas gene 119854 119995 . + . ID=BSGatlas-gene-147;color=#999999;Name=L10-leader_ldlJ;locus_tag=BSU_misc_RNA_3,BSU_MISC_RNA_3 basu168 BSGatlas riboswitch 119854 119995 . + . ID=BSGatlas-gene-147_transcribed;color=#999999;Name=L10-leader_ldlJ;Parent=BSGatlas-transcript-146,BSGatlas-transcript-147,BSGatlas-transcript-148;comment="L10_leader";synonyms="BSU_misc_RNA_3";derives_from=BSGatlas-gene-147 basu168 BSGatlas UTR 119996 120060 . + . ID=BSGatlas-internal_UTR-54;Parent=BSGatlas-transcript-147,BSGatlas-transcript-148;comment="internal_UTR" basu168 BSGatlas transcript 120061 120978 . + . ID=BSGatlas-transcript-149;color=#FF9900;Parent=BSGatlas-gene-148,BSGatlas-gene-149;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 120061 120978 . + . ID=BSGatlas-transcript-150;color=#FF9900;Parent=BSGatlas-gene-148,BSGatlas-gene-149;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 120061 120561 . + . ID=BSGatlas-gene-148;color=#1E90FF;Name=rplJ;locus_tag=BSU_01040,BSU01040 basu168 BSGatlas CDS 120061 120561 . + 0 ID=BSGatlas-gene-148_transcribed;color=#1E90FF;Name=rplJ;Parent=BSGatlas-transcript-147,BSGatlas-transcript-148,BSGatlas-transcript-149,BSGatlas-transcript-150;comment="ribosomal protein L10 (BL5)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005622 intracellular,GO:0005840 ribosome,GO:0006412 translation,GO:0006950 response to stress,GO:0019843 rRNA binding,GO:0030529 NA,GO:0042254 ribosome biogenesis,GO:0070180 large ribosomal subunit rRNA binding";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rplJ";derives_from=BSGatlas-gene-148 basu168 BSGatlas UTR 120562 120606 . + . ID=BSGatlas-internal_UTR-55;Parent=BSGatlas-transcript-147,BSGatlas-transcript-148,BSGatlas-transcript-149,BSGatlas-transcript-150;comment="internal_UTR" basu168 BSGatlas gene 120607 120978 . + . ID=BSGatlas-gene-149;color=#1E90FF;Name=rplL;locus_tag=BSU_01050,BSU01050 basu168 BSGatlas CDS 120607 120978 . + 0 ID=BSGatlas-gene-149_transcribed;color=#1E90FF;Name=rplL;Parent=BSGatlas-transcript-147,BSGatlas-transcript-148,BSGatlas-transcript-149,BSGatlas-transcript-150;comment="ribosomal protein L12 (BL9)";go="GO:0003735 structural constituent of ribosome,GO:0005515 protein binding,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rplL";derives_from=BSGatlas-gene-149 basu168 BSGatlas gene 121068 121673 . + . ID=BSGatlas-gene-150;color=#1E90FF;Name=ybxB;locus_tag=BSU_01060,BSU01060 basu168 BSGatlas CDS 121068 121673 . + 0 ID=BSGatlas-gene-150_transcribed;color=#1E90FF;Name=ybxB;comment="23S rRNA m2G1835 methyltransferase";ec="2.1.1.174";go="GO:0008168 methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybaA,ybxB";derives_from=BSGatlas-gene-150 basu168 BSGatlas transcript 121706 129161 . + . ID=BSGatlas-transcript-152;color=#FF9900;Parent=BSGatlas-gene-151,BSGatlas-gene-152;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 121706 125500 . + . ID=BSGatlas-transcript-151;color=#FF9900;Parent=BSGatlas-gene-151;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 121706 121918 . + . ID=BSGatlas-5'UTR-74;Parent=BSGatlas-transcript-151,BSGatlas-transcript-152;comment="5'UTR" basu168 BSGatlas gene 121919 125500 . + . ID=BSGatlas-gene-151;color=#1E90FF;Name=rpoB;locus_tag=BSU_01070,BSU01070 basu168 BSGatlas CDS 121919 125500 . + 0 ID=BSGatlas-gene-151_transcribed;color=#1E90FF;Name=rpoB;Parent=BSGatlas-transcript-151,BSGatlas-transcript-152;comment="RNA polymerase (beta subunit)";ec="2.7.7.6";go="GO:0003677 DNA binding,GO:0003899 DNA-directed 5'-3' RNA polymerase activity,GO:0006351 transcription, DNA-templated,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0032549 ribonucleoside binding,GO:0046677 response to antibiotic";kegg_pathways="RNA polymerase (ko03020)";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.1 RNA polymerase,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="rpoB";derives_from=BSGatlas-gene-151 basu168 BSGatlas UTR 125501 125561 . + . ID=BSGatlas-internal_UTR-56;Parent=BSGatlas-transcript-152;comment="internal_UTR" basu168 BSGatlas gene 125562 129161 . + . ID=BSGatlas-gene-152;color=#1E90FF;Name=rpoC;locus_tag=BSU_01080,BSU01080 basu168 BSGatlas CDS 125562 129161 . + 0 ID=BSGatlas-gene-152_transcribed;color=#1E90FF;Name=rpoC;Parent=BSGatlas-transcript-152;comment="RNA polymerase (beta' subunit)";ec="2.7.7.6";go="GO:0000428 DNA-directed RNA polymerase complex,GO:0003677 DNA binding,GO:0003899 DNA-directed 5'-3' RNA polymerase activity,GO:0005515 protein binding,GO:0006351 transcription, DNA-templated,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0046677 response to antibiotic";kegg_pathways="RNA polymerase (ko03020)";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.1 RNA polymerase,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="rpoC";derives_from=BSGatlas-gene-152 basu168 BSGatlas transcript 129285 134089 . + . ID=BSGatlas-transcript-153;color=#FF9900;Parent=BSGatlas-gene-153,BSGatlas-gene-154,BSGatlas-gene-155,BSGatlas-gene-156,BSGatlas-gene-157;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 129285 129339 . + . ID=BSGatlas-5'UTR-75;Parent=BSGatlas-transcript-153;comment="5'UTR" basu168 BSGatlas gene 129340 129588 . + . ID=BSGatlas-gene-153;color=#1E90FF;Name=rplGB;locus_tag=BSU_01090,BSU01090 basu168 BSGatlas CDS 129340 129588 . + 0 ID=BSGatlas-gene-153_transcribed;color=#1E90FF;Name=rplGB;Parent=BSGatlas-transcript-153;comment="K-turn RNA binding protein; alternativeribosomal protein L7A";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005737 cytoplasm,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins";synonyms="ktuS,rplGB,rpmXB,ybaB,ybxF";derives_from=BSGatlas-gene-153 basu168 BSGatlas UTR 129589 129701 . + . ID=BSGatlas-internal_UTR-57;Parent=BSGatlas-transcript-153;comment="internal_UTR" basu168 BSGatlas gene 129702 130118 . + . ID=BSGatlas-gene-154;color=#1E90FF;Name=rpsL;locus_tag=BSU_01100,BSU01100 basu168 BSGatlas CDS 129702 130118 . + 0 ID=BSGatlas-gene-154_transcribed;color=#1E90FF;Name=rpsL;Parent=BSGatlas-transcript-153;comment="ribosomal protein S12 (BS12)";go="GO:0000049 tRNA binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015935 small ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA,GO:0046677 response to antibiotic";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="fun,rpsL,strA";derives_from=BSGatlas-gene-154 basu168 BSGatlas UTR 130119 130159 . + . ID=BSGatlas-internal_UTR-58;Parent=BSGatlas-transcript-153;comment="internal_UTR" basu168 BSGatlas gene 130160 130630 . + . ID=BSGatlas-gene-155;color=#1E90FF;Name=rpsG;locus_tag=BSU_01110,BSU01110 basu168 BSGatlas CDS 130160 130630 . + 0 ID=BSGatlas-gene-155_transcribed;color=#1E90FF;Name=rpsG;Parent=BSGatlas-transcript-153;comment="ribosomal protein S7 (BS7)";go="GO:0000049 tRNA binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015935 small ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.5 Universally conserved proteins";synonyms="rpsG";derives_from=BSGatlas-gene-155 basu168 BSGatlas UTR 130631 130683 . + . ID=BSGatlas-internal_UTR-59;Parent=BSGatlas-transcript-153;comment="internal_UTR" basu168 BSGatlas gene 130684 132762 . + . ID=BSGatlas-gene-156;color=#1E90FF;Name=fusA;locus_tag=BSU_01120,BSU01120 basu168 BSGatlas CDS 130684 132762 . + 0 ID=BSGatlas-gene-156_transcribed;color=#1E90FF;Name=fusA;Parent=BSGatlas-transcript-153;comment="elongation factor G";go="GO:0000166 nucleotide binding,GO:0003746 translation elongation factor activity,GO:0003924 GTPase activity,GO:0005525 GTP binding,GO:0005622 intracellular,GO:0005737 cytoplasm,GO:0006412 translation,GO:0006414 translational elongation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.11 Translation factors,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.4.6 Phosphorylation on a Thr residue,SW 6.4.7 Phosphorylation on a Tyr residue";synonyms="fus,fusA";derives_from=BSGatlas-gene-156 basu168 BSGatlas UTR 132763 132881 . + . ID=BSGatlas-internal_UTR-60;Parent=BSGatlas-transcript-153;comment="internal_UTR" basu168 BSGatlas gene 132882 134072 . + . ID=BSGatlas-gene-157;color=#1E90FF;Name=tufA;locus_tag=BSU_01130,BSU01130 basu168 BSGatlas CDS 132882 134072 . + 0 ID=BSGatlas-gene-157_transcribed;color=#1E90FF;Name=tufA;Parent=BSGatlas-transcript-153;comment="elongation factor Tu";ec="3.6.5.3";go="GO:0000166 nucleotide binding,GO:0003746 translation elongation factor activity,GO:0003924 GTPase activity,GO:0005525 GTP binding,GO:0005622 intracellular,GO:0005737 cytoplasm,GO:0006412 translation,GO:0006414 translational elongation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.11 Translation factors,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.4.7 Phosphorylation on a Tyr residue,SW 6.4.8 Phosphorylation on either a Ser, Thr or Tyr residue";synonyms="tufA";derives_from=BSGatlas-gene-157 basu168 BSGatlas UTR 134073 134089 . + . ID=BSGatlas-3'UTR-40;Parent=BSGatlas-transcript-153;comment="3'UTR" basu168 BSGatlas transcript 134136 135127 . + . ID=BSGatlas-transcript-154;color=#FF9900;Parent=BSGatlas-gene-158;comment="Based on: BSGatlas" basu168 BSGatlas UTR 134136 134170 . + . ID=BSGatlas-5'UTR-76;Parent=BSGatlas-transcript-154;comment="5'UTR" basu168 BSGatlas gene 134171 135127 . + . ID=BSGatlas-gene-158;color=#1E90FF;Name=ybaC;locus_tag=BSU_01140,BSU01140 basu168 BSGatlas CDS 134171 135127 . + 0 ID=BSGatlas-gene-158_transcribed;color=#1E90FF;Name=ybaC;Parent=BSGatlas-transcript-154;comment="putative proline iminopeptidase";ec="3.4.11.5,EC-3.4.11.5";go="GO:0004177 aminopeptidase activity,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ybaC";derives_from=BSGatlas-gene-158 basu168 BSGatlas transcript 135170 150339 . + . ID=BSGatlas-transcript-155;color=#FF9900;Parent=BSGatlas-gene-160,BSGatlas-gene-161,BSGatlas-gene-162,BSGatlas-gene-163,BSGatlas-gene-164,BSGatlas-gene-165,BSGatlas-gene-166,BSGatlas-gene-167,BSGatlas-gene-168,BSGatlas-gene-169,BSGatlas-gene-170,BSGatlas-gene-171,BSGatlas-gene-172,BSGatlas-gene-173,BSGatlas-gene-174,BSGatlas-gene-175,BSGatlas-gene-176,BSGatlas-gene-177,BSGatlas-gene-178,BSGatlas-gene-179,BSGatlas-gene-180,BSGatlas-gene-181,BSGatlas-gene-182,BSGatlas-gene-183,BSGatlas-gene-184,BSGatlas-gene-185,BSGatlas-gene-186,BSGatlas-gene-187,BSGatlas-gene-188,BSGatlas-gene-189,BSGatlas-gene-190;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 135170 135363 . + . ID=BSGatlas-5'UTR-77;Parent=BSGatlas-transcript-155;comment="5'UTR" basu168 BSGatlas gene 135238 135321 . + . ID=BSGatlas-gene-159;color=#999999;Name=S10 leader basu168 BSGatlas riboswitch 135238 135321 . + . ID=BSGatlas-gene-159_transcribed;color=#999999;Name=S10 leader;derives_from=BSGatlas-gene-159 basu168 BSGatlas gene 135364 135672 . + . ID=BSGatlas-gene-160;color=#1E90FF;Name=rpsJ;locus_tag=BSU_01150,BSU01150 basu168 BSGatlas CDS 135364 135672 . + 0 ID=BSGatlas-gene-160_transcribed;color=#1E90FF;Name=rpsJ;Parent=BSGatlas-transcript-155;comment="ribosomal protein S10 (BS13); transcriptionantitermination factor";go="GO:0000049 tRNA binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.5 Universally conserved proteins";synonyms="rpsJ,tetA";derives_from=BSGatlas-gene-160 basu168 BSGatlas UTR 135673 135711 . + . ID=BSGatlas-internal_UTR-61;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 135712 136341 . + . ID=BSGatlas-gene-161;color=#1E90FF;Name=rplC;locus_tag=BSU_01160,BSU01160 basu168 BSGatlas CDS 135712 136341 . + 0 ID=BSGatlas-gene-161_transcribed;color=#1E90FF;Name=rplC;Parent=BSGatlas-transcript-155;comment="ribosomal protein L3 (BL3)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006364 rRNA processing,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA,GO:2000234 positive regulation of rRNA processing";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rplC";derives_from=BSGatlas-gene-161 basu168 BSGatlas UTR 136342 136368 . + . ID=BSGatlas-internal_UTR-62;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 136369 136992 . + . ID=BSGatlas-gene-162;color=#1E90FF;Name=rplD;locus_tag=BSU_01170,BSU01170 basu168 BSGatlas CDS 136369 136992 . + 0 ID=BSGatlas-gene-162_transcribed;color=#1E90FF;Name=rplD;Parent=BSGatlas-transcript-155;comment="ribosomal protein L4";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rplD";derives_from=BSGatlas-gene-162 basu168 BSGatlas gene 136992 137279 . + . ID=BSGatlas-gene-163;color=#1E90FF;Name=rplW;locus_tag=BSU_01180,BSU01180 basu168 BSGatlas CDS 136992 137279 . + 0 ID=BSGatlas-gene-163_transcribed;color=#1E90FF;Name=rplW;Parent=BSGatlas-transcript-155;comment="ribosomal protein L23";go="GO:0000166 nucleotide binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="rplW";derives_from=BSGatlas-gene-163 basu168 BSGatlas UTR 137280 137310 . + . ID=BSGatlas-internal_UTR-63;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 137311 138144 . + . ID=BSGatlas-gene-164;color=#1E90FF;Name=rplB;locus_tag=BSU_01190,BSU01190 basu168 BSGatlas CDS 137311 138144 . + 0 ID=BSGatlas-gene-164_transcribed;color=#1E90FF;Name=rplB;Parent=BSGatlas-transcript-155;comment="ribosomal protein L2 (BL2)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005622 intracellular,GO:0005840 ribosome,GO:0006412 translation,GO:0015934 large ribosomal subunit,GO:0016740 transferase activity,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rplB";derives_from=BSGatlas-gene-164 basu168 BSGatlas UTR 138145 138201 . + . ID=BSGatlas-internal_UTR-64;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 138202 138480 . + . ID=BSGatlas-gene-165;color=#1E90FF;Name=rpsS;locus_tag=BSU_01200,BSU01200 basu168 BSGatlas CDS 138202 138480 . + 0 ID=BSGatlas-gene-165_transcribed;color=#1E90FF;Name=rpsS;Parent=BSGatlas-transcript-155;comment="ribosomal protein S19 (BS19)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015935 small ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rpsS";derives_from=BSGatlas-gene-165 basu168 BSGatlas UTR 138481 138496 . + . ID=BSGatlas-internal_UTR-65;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 138497 138838 . + . ID=BSGatlas-gene-166;color=#1E90FF;Name=rplV;locus_tag=BSU_01210,BSU01210 basu168 BSGatlas CDS 138497 138838 . + 0 ID=BSGatlas-gene-166_transcribed;color=#1E90FF;Name=rplV;Parent=BSGatlas-transcript-155;comment="ribosomal protein L22 (BL17)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015934 large ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="rplV";derives_from=BSGatlas-gene-166 basu168 BSGatlas gene 138842 139498 . + . ID=BSGatlas-gene-167;color=#1E90FF;Name=rpsC;locus_tag=BSU_01220,BSU01220 basu168 BSGatlas CDS 138842 139498 . + 0 ID=BSGatlas-gene-167_transcribed;color=#1E90FF;Name=rpsC;Parent=BSGatlas-transcript-155;comment="ribosomal protein S3 (BS3)";go="GO:0003723 RNA binding,GO:0003729 mRNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015935 small ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rpsC";derives_from=BSGatlas-gene-167 basu168 BSGatlas gene 139500 139934 . + . ID=BSGatlas-gene-168;color=#1E90FF;Name=rplP;locus_tag=BSU_01230,BSU01230 basu168 BSGatlas CDS 139500 139934 . + 0 ID=BSGatlas-gene-168_transcribed;color=#1E90FF;Name=rplP;Parent=BSGatlas-transcript-155;comment="ribosomal protein L16";go="GO:0000049 tRNA binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rplP";derives_from=BSGatlas-gene-168 basu168 BSGatlas gene 139924 140124 . + . ID=BSGatlas-gene-169;color=#1E90FF;Name=rpmC;locus_tag=BSU_01240,BSU01240 basu168 BSGatlas CDS 139924 140124 . + 0 ID=BSGatlas-gene-169_transcribed;color=#1E90FF;Name=rpmC;Parent=BSGatlas-transcript-155;comment="ribosomal protein L29";go="GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins";synonyms="rpmC";derives_from=BSGatlas-gene-169 basu168 BSGatlas UTR 140125 140146 . + . ID=BSGatlas-internal_UTR-66;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 140147 140410 . + . ID=BSGatlas-gene-170;color=#1E90FF;Name=rpsQ;locus_tag=BSU_01250,BSU01250 basu168 BSGatlas CDS 140147 140410 . + 0 ID=BSGatlas-gene-170_transcribed;color=#1E90FF;Name=rpsQ;Parent=BSGatlas-transcript-155;comment="ribosomal protein S17 (BS16)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rpsQ";derives_from=BSGatlas-gene-170 basu168 BSGatlas UTR 140411 140450 . + . ID=BSGatlas-internal_UTR-67;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 140451 140819 . + . ID=BSGatlas-gene-171;color=#1E90FF;Name=rplN;locus_tag=BSU_01260,BSU01260 basu168 BSGatlas CDS 140451 140819 . + 0 ID=BSGatlas-gene-171_transcribed;color=#1E90FF;Name=rplN;Parent=BSGatlas-transcript-155;comment="ribosomal protein L14";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015934 large ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.5 Universally conserved proteins";synonyms="rplN";derives_from=BSGatlas-gene-171 basu168 BSGatlas UTR 140820 140856 . + . ID=BSGatlas-internal_UTR-68;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 140857 141168 . + . ID=BSGatlas-gene-172;color=#1E90FF;Name=rplX;locus_tag=BSU_01270,BSU01270 basu168 BSGatlas CDS 140857 141168 . + 0 ID=BSGatlas-gene-172_transcribed;color=#1E90FF;Name=rplX;Parent=BSGatlas-transcript-155;comment="ribosomal protein L24 (BL23)";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rplX";derives_from=BSGatlas-gene-172 basu168 BSGatlas UTR 141169 141194 . + . ID=BSGatlas-internal_UTR-69;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 141195 141734 . + . ID=BSGatlas-gene-173;color=#1E90FF;Name=rplE;locus_tag=BSU_01280,BSU01280 basu168 BSGatlas CDS 141195 141734 . + 0 ID=BSGatlas-gene-173_transcribed;color=#1E90FF;Name=rplE;Parent=BSGatlas-transcript-155;comment="ribosomal protein L5 (BL6)";go="GO:0000049 tRNA binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005622 intracellular,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rplE";derives_from=BSGatlas-gene-173 basu168 BSGatlas UTR 141735 141756 . + . ID=BSGatlas-internal_UTR-70;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 141757 141942 . + . ID=BSGatlas-gene-174;color=#1E90FF;Name=rpsN;locus_tag=BSU_01290,BSU01290 basu168 BSGatlas CDS 141757 141942 . + 0 ID=BSGatlas-gene-174_transcribed;color=#1E90FF;Name=rpsN;Parent=BSGatlas-transcript-155;comment="ribosomal protein S14";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0008270 zinc ion binding,GO:0019843 rRNA binding,GO:0030529 NA,GO:0046872 metal ion binding";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="rpsN";derives_from=BSGatlas-gene-174 basu168 BSGatlas UTR 141943 141973 . + . ID=BSGatlas-internal_UTR-71;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 141974 142372 . + . ID=BSGatlas-gene-175;color=#1E90FF;Name=rpsH;locus_tag=BSU_01300,BSU01300 basu168 BSGatlas CDS 141974 142372 . + 0 ID=BSGatlas-gene-175_transcribed;color=#1E90FF;Name=rpsH;Parent=BSGatlas-transcript-155;comment="ribosomal protein S8 (BS8)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.5 Universally conserved proteins";synonyms="rpsH";derives_from=BSGatlas-gene-175 basu168 BSGatlas UTR 142373 142401 . + . ID=BSGatlas-internal_UTR-72;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 142402 142941 . + . ID=BSGatlas-gene-176;color=#1E90FF;Name=rplF;locus_tag=BSU_01310,BSU01310 basu168 BSGatlas CDS 142402 142941 . + 0 ID=BSGatlas-gene-176_transcribed;color=#1E90FF;Name=rplF;Parent=BSGatlas-transcript-155;comment="ribosomal protein L6 (BL8)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005515 protein binding,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rplF";derives_from=BSGatlas-gene-176 basu168 BSGatlas UTR 142942 142973 . + . ID=BSGatlas-internal_UTR-73;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 142974 143336 . + . ID=BSGatlas-gene-177;color=#1E90FF;Name=rplR;locus_tag=BSU_01320,BSU01320 basu168 BSGatlas CDS 142974 143336 . + 0 ID=BSGatlas-gene-177_transcribed;color=#1E90FF;Name=rplR;Parent=BSGatlas-transcript-155;comment="ribosomal protein L18";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006364 rRNA processing,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rplR";derives_from=BSGatlas-gene-177 basu168 BSGatlas UTR 143337 143360 . + . ID=BSGatlas-internal_UTR-74;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 143361 143861 . + . ID=BSGatlas-gene-178;color=#1E90FF;Name=rpsE;locus_tag=BSU_01330,BSU01330 basu168 BSGatlas CDS 143361 143861 . + 0 ID=BSGatlas-gene-178_transcribed;color=#1E90FF;Name=rpsE;Parent=BSGatlas-transcript-155;comment="ribosomal protein S5";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015935 small ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA,GO:0046677 response to antibiotic";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="rpsE";derives_from=BSGatlas-gene-178 basu168 BSGatlas gene 143875 144054 . + . ID=BSGatlas-gene-179;color=#1E90FF;Name=rpmD;locus_tag=BSU_01340,BSU01340 basu168 BSGatlas CDS 143875 144054 . + 0 ID=BSGatlas-gene-179_transcribed;color=#1E90FF;Name=rpmD;Parent=BSGatlas-transcript-155;comment="ribosomal protein L30 (BL27)";go="GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015934 large ribosomal subunit,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rpmD";derives_from=BSGatlas-gene-179 basu168 BSGatlas UTR 144055 144084 . + . ID=BSGatlas-internal_UTR-75;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas transcript 144085 147273 . + . ID=BSGatlas-transcript-156;color=#FF9900;Parent=BSGatlas-gene-180,BSGatlas-gene-181,BSGatlas-gene-182,BSGatlas-gene-183;comment="Based on: SubtiWiki" basu168 BSGatlas gene 144085 144525 . + . ID=BSGatlas-gene-180;color=#1E90FF;Name=rplO;locus_tag=BSU_01350,BSU01350 basu168 BSGatlas CDS 144085 144525 . + 0 ID=BSGatlas-gene-180_transcribed;color=#1E90FF;Name=rplO;Parent=BSGatlas-transcript-155,BSGatlas-transcript-156;comment="ribosomal protein L15";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0015934 large ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins";synonyms="rplO";derives_from=BSGatlas-gene-180 basu168 BSGatlas gene 144527 145822 . + . ID=BSGatlas-gene-181;color=#1E90FF;Name=secY;locus_tag=BSU_01360,BSU01360 basu168 BSGatlas CDS 144527 145822 . + 0 ID=BSGatlas-gene-181_transcribed;color=#1E90FF;Name=secY;Parent=BSGatlas-transcript-155,BSGatlas-transcript-156;comment="preprotein translocase subunit";go="GO:0005622 intracellular,GO:0005886 plasma membrane,GO:0006605 protein targeting,GO:0006810 transport,GO:0015031 protein transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0043952 protein transport by the Sec complex,GO:0065002 intracellular protein transmembrane transport";kegg_pathways="Bacterial secretion system (ko03070),Protein export (ko03060),Quorum sensing (ko02024)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.2 Membrane proteins,SW 6.5 Universally conserved proteins";synonyms="secY";derives_from=BSGatlas-gene-181 basu168 BSGatlas UTR 145823 145876 . + . ID=BSGatlas-internal_UTR-76;Parent=BSGatlas-transcript-155,BSGatlas-transcript-156;comment="internal_UTR" basu168 BSGatlas gene 145877 146530 . + . ID=BSGatlas-gene-182;color=#1E90FF;Name=adk;locus_tag=BSU_01370,BSU01370 basu168 BSGatlas CDS 145877 146530 . + 0 ID=BSGatlas-gene-182_transcribed;color=#1E90FF;Name=adk;Parent=BSGatlas-transcript-155,BSGatlas-transcript-156;comment="adenylate kinase";ec="2.7.4.3,EC-2.7.4.3";go="GO:0000166 nucleotide binding,GO:0004017 adenylate kinase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006139 nucleobase-containing compound metabolic process,GO:0009165 nucleotide biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016776 phosphotransferase activity, phosphate group as acceptor,GO:0019205 nucleobase-containing compound kinase activity,GO:0044209 AMP salvage,GO:0046872 metal ion binding,GO:0046939 nucleotide phosphorylation";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230),Thiamine metabolism (ko00730)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="adk";derives_from=BSGatlas-gene-182 basu168 BSGatlas gene 146527 147273 . + . ID=BSGatlas-gene-183;color=#1E90FF;Name=map;locus_tag=BSU_01380,BSU01380 basu168 BSGatlas CDS 146527 147273 . + 0 ID=BSGatlas-gene-183_transcribed;color=#1E90FF;Name=map;Parent=BSGatlas-transcript-155,BSGatlas-transcript-156;comment="methionine aminopeptidase";ec="3.4.11.18,EC-3.4.11.18";go="GO:0004177 aminopeptidase activity,GO:0005737 cytoplasm,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008235 metalloexopeptidase activity,GO:0016787 hydrolase activity,GO:0046872 metal ion binding,GO:0070006 metalloaminopeptidase activity,GO:0070084 protein initiator methionine removal";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.12 Translation/ other,SW 3.3.4 Protein modification,SW 3.3.4.1 Protein maturation";synonyms="map,mapA";derives_from=BSGatlas-gene-183 basu168 BSGatlas UTR 147274 147311 . + . ID=BSGatlas-internal_UTR-77;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 147312 147536 . + . ID=BSGatlas-gene-184;color=#1E90FF;Name=ybzG;locus_tag=BSU_01389,BSU01389 basu168 BSGatlas CDS 147312 147536 . + 0 ID=BSGatlas-gene-184_transcribed;color=#1E90FF;Name=ybzG;Parent=BSGatlas-transcript-155;comment="putative ribosome binding protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybzG";derives_from=BSGatlas-gene-184 basu168 BSGatlas UTR 147537 147584 . + . ID=BSGatlas-internal_UTR-78;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 147585 147803 . + . ID=BSGatlas-gene-185;color=#1E90FF;Name=infA;locus_tag=BSU_01390,BSU01390 basu168 BSGatlas CDS 147585 147803 . + 0 ID=BSGatlas-gene-185_transcribed;color=#1E90FF;Name=infA;Parent=BSGatlas-transcript-155;comment="initiation factor IF-I";go="GO:0003743 translation initiation factor activity,GO:0005737 cytoplasm,GO:0006412 translation,GO:0006413 translational initiation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.11 Translation factors,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.7 Phosphorylation on a Tyr residue";synonyms="infA";derives_from=BSGatlas-gene-185 basu168 BSGatlas UTR 147804 147836 . + . ID=BSGatlas-internal_UTR-79;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 147837 147950 . + . ID=BSGatlas-gene-186;color=#1E90FF;Name=rpmJ;locus_tag=BSU_01400,BSU01400 basu168 BSGatlas CDS 147837 147950 . + 0 ID=BSGatlas-gene-186_transcribed;color=#1E90FF;Name=rpmJ;Parent=BSGatlas-transcript-155;comment="ribosomal protein L36 (ribosomal protein B)";go="GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins";synonyms="rpmJ,rpmX";derives_from=BSGatlas-gene-186 basu168 BSGatlas UTR 147951 147972 . + . ID=BSGatlas-internal_UTR-80;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 147973 148338 . + . ID=BSGatlas-gene-187;color=#1E90FF;Name=rpsM;locus_tag=BSU_01410,BSU01410 basu168 BSGatlas CDS 147973 148338 . + 0 ID=BSGatlas-gene-187_transcribed;color=#1E90FF;Name=rpsM;Parent=BSGatlas-transcript-155;comment="ribosomal protein S13";go="GO:0000049 tRNA binding,GO:0003676 nucleic acid binding,GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005622 intracellular,GO:0005829 cytosol,GO:0005840 ribosome,GO:0006412 translation,GO:0015935 small ribosomal subunit,GO:0019843 rRNA binding,GO:0030529 NA,GO:0042254 ribosome biogenesis";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.5 Universally conserved proteins";synonyms="rpsM";derives_from=BSGatlas-gene-187 basu168 BSGatlas UTR 148339 148358 . + . ID=BSGatlas-internal_UTR-81;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 148359 148754 . + . ID=BSGatlas-gene-188;color=#1E90FF;Name=rpsK;locus_tag=BSU_01420,BSU01420 basu168 BSGatlas CDS 148359 148754 . + 0 ID=BSGatlas-gene-188_transcribed;color=#1E90FF;Name=rpsK;Parent=BSGatlas-transcript-155;comment="ribosomal protein S11 (BS11)";go="GO:0003723 RNA binding,GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0019843 rRNA binding,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rpsK";derives_from=BSGatlas-gene-188 basu168 BSGatlas UTR 148755 148930 . + . ID=BSGatlas-internal_UTR-82;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 148931 149875 . + . ID=BSGatlas-gene-189;color=#1E90FF;Name=rpoA;locus_tag=BSU_01430,BSU01430 basu168 BSGatlas CDS 148931 149875 . + 0 ID=BSGatlas-gene-189_transcribed;color=#1E90FF;Name=rpoA;Parent=BSGatlas-transcript-155;comment="RNA polymerase (alpha subunit)";ec="2.7.7.6";go="GO:0003677 DNA binding,GO:0003899 DNA-directed 5'-3' RNA polymerase activity,GO:0005515 protein binding,GO:0006351 transcription, DNA-templated,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0046983 protein dimerization activity";kegg_pathways="RNA polymerase (ko03020)";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.1 RNA polymerase,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rpoA";derives_from=BSGatlas-gene-189 basu168 BSGatlas UTR 149876 149952 . + . ID=BSGatlas-internal_UTR-83;Parent=BSGatlas-transcript-155;comment="internal_UTR" basu168 BSGatlas gene 149953 150315 . + . ID=BSGatlas-gene-190;color=#1E90FF;Name=rplQ;locus_tag=BSU_01440,BSU01440 basu168 BSGatlas CDS 149953 150315 . + 0 ID=BSGatlas-gene-190_transcribed;color=#1E90FF;Name=rplQ;Parent=BSGatlas-transcript-155;comment="ribosomal protein L17 (BL15)";go="GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rplQ";derives_from=BSGatlas-gene-190 basu168 BSGatlas UTR 150316 150339 . + . ID=BSGatlas-3'UTR-41;Parent=BSGatlas-transcript-155;comment="3'UTR" basu168 BSGatlas gene 150443 151288 . + . ID=BSGatlas-gene-191;color=#1E90FF;Name=ybxA;locus_tag=BSU_01450,BSU01450 basu168 BSGatlas CDS 150443 151288 . + 0 ID=BSGatlas-gene-191_transcribed;color=#1E90FF;Name=ybxA;comment="energizing coupling factor of ABC influxtransporter (ATP-binding protein)";ec="3.6.3.-";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.3 ECF transporter,SW 1.2.3.1 The general components of the ECF transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ecfA1,ybaD,ybxA";derives_from=BSGatlas-gene-191 basu168 BSGatlas gene 151303 152133 . + . ID=BSGatlas-gene-192;color=#1E90FF;Name=ybaE;locus_tag=BSU_01460,BSU01460 basu168 BSGatlas CDS 151303 152133 . + 0 ID=BSGatlas-gene-192_transcribed;color=#1E90FF;Name=ybaE;comment="energizing coupling factor of ABC influxtransporter (ATP-binding protein)";ec="3.6.3.-";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.3 ECF transporter,SW 1.2.3.1 The general components of the ECF transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ecfA2,ybaE";derives_from=BSGatlas-gene-192 basu168 BSGatlas gene 152130 152927 . + . ID=BSGatlas-gene-193;color=#1E90FF;Name=ybaF;locus_tag=BSU_01470,BSU01470 basu168 BSGatlas CDS 152130 152927 . + 0 ID=BSGatlas-gene-193_transcribed;color=#1E90FF;Name=ybaF;comment="component of the influx ECF transporters";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.3 ECF transporter,SW 1.2.3.1 The general components of the ECF transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ecfT,ybaF";derives_from=BSGatlas-gene-193 basu168 BSGatlas transcript 152937 154692 . + . ID=BSGatlas-transcript-157;color=#FF9900;Parent=BSGatlas-gene-194,BSGatlas-gene-196,BSGatlas-gene-197,BSGatlas-gene-198;comment="Based on: SubtiWiki" basu168 BSGatlas gene 152937 153680 . + . ID=BSGatlas-gene-194;color=#1E90FF;Name=truA;locus_tag=BSU_01480,BSU01480 basu168 BSGatlas CDS 152937 153680 . + 0 ID=BSGatlas-gene-194_transcribed;color=#1E90FF;Name=truA;Parent=BSGatlas-transcript-157;comment="tRNA pseudouridine (38-40) synthase";ec="5.4.99.12,EC-4.2.1.70;EC-5.4.99.12";go="GO:0001522 pseudouridine synthesis,GO:0003723 RNA binding,GO:0008033 tRNA processing,GO:0009982 pseudouridine synthase activity,GO:0016853 isomerase activity,GO:0031119 tRNA pseudouridine synthesis";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation,SW 6 Groups of genes,SW 6.5 Universally conserved proteins";synonyms="truA,ybaH";derives_from=BSGatlas-gene-194 basu168 BSGatlas transcript 153039 153529 . - . ID=BSGatlas-transcript-158;color=#B37924;Parent=BSGatlas-gene-195;comment="Based on: BSGatlas" basu168 BSGatlas gene 153039 153507 . - . ID=BSGatlas-gene-195;color=#8F1D1D;Name=S58;locus_tag=new_153039_153507_c basu168 BSGatlas ncRNA 153039 153507 . - . ID=BSGatlas-gene-195_transcribed;color=#8F1D1D;Name=S58;Parent=BSGatlas-transcript-158;synonyms="S58";derives_from=BSGatlas-gene-195 basu168 BSGatlas UTR 153508 153529 . - . ID=BSGatlas-5'UTR-78;Parent=BSGatlas-transcript-158;comment="5'UTR" basu168 BSGatlas UTR 153681 153735 . + . ID=BSGatlas-internal_UTR-84;Parent=BSGatlas-transcript-157;comment="internal_UTR" basu168 BSGatlas transcript 153725 154692 . + . ID=BSGatlas-transcript-159;color=#FF9900;Parent=BSGatlas-gene-197,BSGatlas-gene-198;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 153725 153841 . + . ID=BSGatlas-5'UTR-79;Parent=BSGatlas-transcript-159;comment="5'UTR" basu168 BSGatlas gene 153736 153793 . + . ID=BSGatlas-gene-196;color=#999999;Name=ldlM;locus_tag=BSU_misc_RNA_4,BSU_MISC_RNA_4 basu168 BSGatlas riboswitch 153736 153793 . + . ID=BSGatlas-gene-196_transcribed;color=#999999;Name=ldlM;Parent=BSGatlas-transcript-157;comment="putative L13_leader";synonyms="ldlM,NA";derives_from=BSGatlas-gene-196 basu168 BSGatlas UTR 153794 153841 . + . ID=BSGatlas-internal_UTR-85;Parent=BSGatlas-transcript-157;comment="internal_UTR" basu168 BSGatlas gene 153842 154279 . + . ID=BSGatlas-gene-197;color=#1E90FF;Name=rplM;locus_tag=BSU_01490,BSU01490 basu168 BSGatlas CDS 153842 154279 . + 0 ID=BSGatlas-gene-197_transcribed;color=#1E90FF;Name=rplM;Parent=BSGatlas-transcript-157,BSGatlas-transcript-159;comment="ribosomal protein L13";go="GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="rplM";derives_from=BSGatlas-gene-197 basu168 BSGatlas UTR 154280 154299 . + . ID=BSGatlas-internal_UTR-86;Parent=BSGatlas-transcript-157,BSGatlas-transcript-159;comment="internal_UTR" basu168 BSGatlas gene 154300 154692 . + . ID=BSGatlas-gene-198;color=#1E90FF;Name=rpsI;locus_tag=BSU_01500,BSU01500 basu168 BSGatlas CDS 154300 154692 . + 0 ID=BSGatlas-gene-198_transcribed;color=#1E90FF;Name=rpsI;Parent=BSGatlas-transcript-157,BSGatlas-transcript-159;comment="ribosomal protein S9";go="GO:0003735 structural constituent of ribosome,GO:0005840 ribosome,GO:0006412 translation,GO:0030529 NA";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.4 Ribosomal proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="rpsI";derives_from=BSGatlas-gene-198 basu168 BSGatlas transcript 154838 155923 . + . ID=BSGatlas-transcript-160;color=#FF9900;Parent=BSGatlas-gene-199;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 154838 155155 . + . ID=BSGatlas-5'UTR-80;Parent=BSGatlas-transcript-160;comment="5'UTR" basu168 BSGatlas transcript 155121 155923 . + . ID=BSGatlas-transcript-161;color=#FF9900;Parent=BSGatlas-gene-199;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 155121 155155 . + . ID=BSGatlas-5'UTR-81;Parent=BSGatlas-transcript-161;comment="5'UTR" basu168 BSGatlas gene 155156 155923 . + . ID=BSGatlas-gene-199;color=#1E90FF;Name=ybaJ;locus_tag=BSU_01510,BSU01510 basu168 BSGatlas CDS 155156 155923 . + 0 ID=BSGatlas-gene-199_transcribed;color=#1E90FF;Name=ybaJ;Parent=BSGatlas-transcript-160,BSGatlas-transcript-161;comment="putative methyltransferase";go="GO:0008152 metabolic process,GO:0008168 methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybaJ";derives_from=BSGatlas-gene-199 basu168 BSGatlas transcript 156089 157347 . + . ID=BSGatlas-transcript-162;color=#FF9900;Parent=BSGatlas-gene-200,BSGatlas-gene-201;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 156089 156108 . + . ID=BSGatlas-5'UTR-82;Parent=BSGatlas-transcript-162;comment="5'UTR" basu168 BSGatlas gene 156109 156552 . + . ID=BSGatlas-gene-200;color=#1E90FF;Name=ybaK;locus_tag=BSU_01520,BSU01520 basu168 BSGatlas CDS 156109 156552 . + 0 ID=BSGatlas-gene-200_transcribed;color=#1E90FF;Name=ybaK;Parent=BSGatlas-transcript-162;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="ybaK,ybxH";derives_from=BSGatlas-gene-200 basu168 BSGatlas UTR 156553 156611 . + . ID=BSGatlas-internal_UTR-87;Parent=BSGatlas-transcript-162;comment="internal_UTR" basu168 BSGatlas transcript 156588 157347 . + . ID=BSGatlas-transcript-163;color=#FF9900;Parent=BSGatlas-gene-201;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 156588 156611 . + . ID=BSGatlas-5'UTR-83;Parent=BSGatlas-transcript-163;comment="5'UTR" basu168 BSGatlas gene 156612 157325 . + . ID=BSGatlas-gene-201;color=#1E90FF;Name=cwlD;locus_tag=BSU_01530,BSU01530 basu168 BSGatlas CDS 156612 157325 . + 0 ID=BSGatlas-gene-201_transcribed;color=#1E90FF;Name=cwlD;Parent=BSGatlas-transcript-162,BSGatlas-transcript-163;comment="N-acetylmuramoyl-L-alanine amidase";ec="3.5.1.28,EC-3.5.1.28;EC-3.4.24.32";go="GO:0005576 extracellular region,GO:0008745 N-acetylmuramoyl-L-alanine amidase activity,GO:0009253 peptidoglycan catabolic process,GO:0016787 hydrolase activity";kegg_pathways="Cationic antimicrobial peptide (CAMP) resistance (ko01503)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.5 Cell wall/ other,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="cwlD";derives_from=BSGatlas-gene-201 basu168 BSGatlas UTR 157326 157347 . + . ID=BSGatlas-3'UTR-42;Parent=BSGatlas-transcript-162,BSGatlas-transcript-163;comment="3'UTR" basu168 BSGatlas transcript 157370 158479 . + . ID=BSGatlas-transcript-164;color=#FF9900;Parent=BSGatlas-gene-202;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 157370 157420 . + . ID=BSGatlas-5'UTR-84;Parent=BSGatlas-transcript-164;comment="5'UTR" basu168 BSGatlas gene 157421 158479 . + . ID=BSGatlas-gene-202;color=#1E90FF;Name=salA;locus_tag=BSU_01540,BSU01540 basu168 BSGatlas CDS 157421 158479 . + 0 ID=BSGatlas-gene-202_transcribed;color=#1E90FF;Name=salA;Parent=BSGatlas-transcript-164;comment="phosphorylation-dependent (Y327) transcriptionalregulator";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0045892 negative regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 3.4.6 Transition state regulators";synonyms="salA,ybaL,ybxI";derives_from=BSGatlas-gene-202 basu168 BSGatlas transcript 158467 159100 . - . ID=BSGatlas-transcript-166;color=#B37924;Parent=BSGatlas-gene-203;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 158467 158514 . - . ID=BSGatlas-3'UTR-44;Parent=BSGatlas-transcript-166;comment="3'UTR" basu168 BSGatlas gene 158515 159072 . - . ID=BSGatlas-gene-203;color=#3474B3;Name=gerD;locus_tag=BSU_01550,BSU01550 basu168 BSGatlas CDS 158515 159072 . - 0 ID=BSGatlas-gene-203_transcribed;color=#3474B3;Name=gerD;Parent=BSGatlas-transcript-166;comment="lipoprotein factor mediating clustering ofgermination proteins";go="GO:0005886 plasma membrane,GO:0009847 spore germination,GO:0016020 membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.4 Germination,SW 4.2.4.2 Additional germination proteins,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gerD";derives_from=BSGatlas-gene-203 basu168 BSGatlas UTR 159073 159100 . - . ID=BSGatlas-5'UTR-85;Parent=BSGatlas-transcript-166;comment="5'UTR" basu168 BSGatlas gene 159182 159778 . + . ID=BSGatlas-gene-204;color=#1E90FF;Name=kbaA;locus_tag=BSU_01560,BSU01560 basu168 BSGatlas transcript 159182 159778 . + . ID=BSGatlas-transcript-168;color=#FF9900;Parent=BSGatlas-gene-204;comment="Based on: BsubCyc" basu168 BSGatlas CDS 159182 159778 . + 0 ID=BSGatlas-gene-204_transcribed;color=#1E90FF;Name=kbaA;Parent=BSGatlas-transcript-168;comment="inner membrane protein involved in activation ofthe KinB signaling pathway to sporulation";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0045881 positive regulation of sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.7 phosphorelay,SW 3.4.7.2 Proteins controlling the activity of the kinases,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay,SW 4.2.2.2 Proteins controlling the activity of the kinases,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="kbaA,ybaM,ybxC";derives_from=BSGatlas-gene-204 basu168 BSGatlas transcript 159586 160581 . - . ID=BSGatlas-transcript-169;color=#B37924;Parent=BSGatlas-gene-205;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 159586 159778 . - . ID=BSGatlas-3'UTR-46;Parent=BSGatlas-transcript-169;comment="3'UTR" basu168 BSGatlas gene 159779 160543 . - . ID=BSGatlas-gene-205;color=#3474B3;Name=pdaB;locus_tag=BSU_01570,BSU01570 basu168 BSGatlas CDS 159779 160543 . - 0 ID=BSGatlas-gene-205_transcribed;color=#3474B3;Name=pdaB;Parent=BSGatlas-transcript-169;comment="polysaccharide deacetylase involved insporulation";go="GO:0003824 catalytic activity,GO:0005975 carbohydrate metabolic process,GO:0016787 hydrolase activity,GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0042763 intracellular immature spore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="pdaB,ybaN,ybxG";derives_from=BSGatlas-gene-205 basu168 BSGatlas UTR 160544 160581 . - . ID=BSGatlas-5'UTR-86;Parent=BSGatlas-transcript-169;comment="5'UTR" basu168 BSGatlas transcript 160675 162445 . + . ID=BSGatlas-transcript-170;color=#FF9900;Parent=BSGatlas-gene-206;comment="Based on: BSGatlas" basu168 BSGatlas UTR 160675 160892 . + . ID=BSGatlas-5'UTR-87;Parent=BSGatlas-transcript-170;comment="5'UTR" basu168 BSGatlas gene 160893 162445 . + . ID=BSGatlas-gene-206;color=#CC33FF;Name=rrnI-16S;locus_tag=BSU_rRNA_23,BSU_RRNA_23 basu168 BSGatlas rRNA 160893 162445 . + . ID=BSGatlas-gene-206_transcribed;color=#CC33FF;Name=rrnI-16S;Parent=BSGatlas-transcript-170;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnI-16S";derives_from=BSGatlas-gene-206 basu168 BSGatlas gene 162609 165535 . + . ID=BSGatlas-gene-207;color=#CC33FF;Name=rrnI-23S;locus_tag=BSU_rRNA_14,BSU_RRNA_14 basu168 BSGatlas rRNA 162609 165535 . + . ID=BSGatlas-gene-207_transcribed;color=#CC33FF;Name=rrnI-23S;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnI-23S";derives_from=BSGatlas-gene-207 basu168 BSGatlas gene 165590 165707 . + . ID=BSGatlas-gene-208;color=#CC33FF;Name=rrnI-5S;locus_tag=BSU_rRNA_15,BSU_RRNA_15 basu168 BSGatlas rRNA 165590 165707 . + . ID=BSGatlas-gene-208_transcribed;color=#CC33FF;Name=rrnI-5S;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnI-5S";derives_from=BSGatlas-gene-208 basu168 BSGatlas gene 165753 165825 . + . ID=BSGatlas-gene-209;color=#FFFF00;Name=trnI-Asn;locus_tag=BSU_tRNA_23,BSU_TRNA_23 basu168 BSGatlas tRNA 165753 165825 . + . ID=BSGatlas-gene-209_transcribed;color=#FFFF00;Name=trnI-Asn;comment="tRNA-Asn";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnH,trnI-Asn";derives_from=BSGatlas-gene-209 basu168 BSGatlas gene 165829 165902 . + . ID=BSGatlas-gene-210;color=#FFFF00;Name=trnI-Thr;locus_tag=BSU_tRNA_24,BSU_TRNA_24 basu168 BSGatlas tRNA 165829 165902 . + . ID=BSGatlas-gene-210_transcribed;color=#FFFF00;Name=trnI-Thr;comment="tRNA-Thr";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnH,trnI-Thr";derives_from=BSGatlas-gene-210 basu168 BSGatlas gene 165958 166033 . + . ID=BSGatlas-gene-211;color=#FFFF00;Name=trnI-Gly;locus_tag=BSU_tRNA_25,BSU_TRNA_25 basu168 BSGatlas tRNA 165958 166033 . + . ID=BSGatlas-gene-211_transcribed;color=#FFFF00;Name=trnI-Gly;comment="tRNA-Gly";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnH,trnI-Gly";derives_from=BSGatlas-gene-211 basu168 BSGatlas gene 166063 166140 . + . ID=BSGatlas-gene-212;color=#FFFF00;Name=trnI-Arg;locus_tag=BSU_tRNA_26,BSU_TRNA_26 basu168 BSGatlas tRNA 166063 166140 . + . ID=BSGatlas-gene-212_transcribed;color=#FFFF00;Name=trnI-Arg;comment="tRNA-Arg";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnH,trnI-Arg";derives_from=BSGatlas-gene-212 basu168 BSGatlas gene 166167 166244 . + . ID=BSGatlas-gene-213;color=#FFFF00;Name=trnI-Pro;locus_tag=BSU_tRNA_27,BSU_TRNA_27 basu168 BSGatlas tRNA 166167 166244 . + . ID=BSGatlas-gene-213_transcribed;color=#FFFF00;Name=trnI-Pro;comment="tRNA-Pro";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnH,trnI-Pro";derives_from=BSGatlas-gene-213 basu168 BSGatlas gene 166252 166328 . + . ID=BSGatlas-gene-214;color=#FFFF00;Name=trnI-Ala;locus_tag=BSU_tRNA_28,BSU_TRNA_28 basu168 BSGatlas tRNA 166252 166328 . + . ID=BSGatlas-gene-214_transcribed;color=#FFFF00;Name=trnI-Ala;comment="tRNA-Ala";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnH,trnI-Ala";derives_from=BSGatlas-gene-214 basu168 BSGatlas gene 166500 168053 . + . ID=BSGatlas-gene-215;color=#CC33FF;Name=rrnH-16S;locus_tag=BSU_rRNA_16,BSU_RRNA_16 basu168 BSGatlas rRNA 166500 168053 . + . ID=BSGatlas-gene-215_transcribed;color=#CC33FF;Name=rrnH-16S;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnH-16S";derives_from=BSGatlas-gene-215 basu168 BSGatlas gene 168217 171141 . + . ID=BSGatlas-gene-216;color=#CC33FF;Name=rrnH-23S;locus_tag=BSU_rRNA_29,BSU_RRNA_29 basu168 BSGatlas rRNA 168217 171141 . + . ID=BSGatlas-gene-216_transcribed;color=#CC33FF;Name=rrnH-23S;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnH-23S";derives_from=BSGatlas-gene-216 basu168 BSGatlas gene 171196 171314 . + . ID=BSGatlas-gene-217;color=#CC33FF;Name=rrnH-5S;locus_tag=BSU_rRNA_24,BSU_RRNA_24 basu168 BSGatlas rRNA 171196 171314 . + . ID=BSGatlas-gene-217_transcribed;color=#CC33FF;Name=rrnH-5S;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnH-5S";derives_from=BSGatlas-gene-217 basu168 BSGatlas gene 171498 173049 . + . ID=BSGatlas-gene-218;color=#CC33FF;Name=rrnG-16S;locus_tag=BSU_rRNA_25,BSU_RRNA_25 basu168 BSGatlas rRNA 171498 173049 . + . ID=BSGatlas-gene-218_transcribed;color=#CC33FF;Name=rrnG-16S;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnG-16S";derives_from=BSGatlas-gene-218 basu168 BSGatlas gene 173213 176141 . + . ID=BSGatlas-gene-219;color=#CC33FF;Name=rrnG-23S;locus_tag=BSU_rRNA_27,BSU_RRNA_27 basu168 BSGatlas rRNA 173213 176141 . + . ID=BSGatlas-gene-219_transcribed;color=#CC33FF;Name=rrnG-23S;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnG-23S";derives_from=BSGatlas-gene-219 basu168 BSGatlas gene 176196 176315 . + . ID=BSGatlas-gene-220;color=#CC33FF;Name=rrnG-5S;locus_tag=BSU_rRNA_28,BSU_RRNA_28 basu168 BSGatlas rRNA 176196 176315 . + . ID=BSGatlas-gene-220_transcribed;color=#CC33FF;Name=rrnG-5S;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnG-5S";derives_from=BSGatlas-gene-220 basu168 BSGatlas transcript 176926 178519 . + . ID=BSGatlas-transcript-171;color=#FF9900;Parent=BSGatlas-gene-221;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 176926 177082 . + . ID=BSGatlas-5'UTR-88;Parent=BSGatlas-transcript-171;comment="5'UTR" basu168 BSGatlas gene 177083 178519 . + . ID=BSGatlas-gene-221;color=#1E90FF;Name=ybaR;locus_tag=BSU_01580,BSU01580 basu168 BSGatlas CDS 177083 178519 . + 0 ID=BSGatlas-gene-221_transcribed;color=#1E90FF;Name=ybaR;Parent=BSGatlas-transcript-171;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0008271 secondary active sulfate transmembrane transporter activity,GO:0008272 sulfate transport,GO:0015116 sulfate transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport,GO:1902358 sulfate transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.4 Transporter for organic acids,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybaR";derives_from=BSGatlas-gene-221 basu168 BSGatlas transcript 178598 179585 . + . ID=BSGatlas-transcript-172;color=#FF9900;Parent=BSGatlas-gene-222;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 178598 178664 . + . ID=BSGatlas-5'UTR-89;Parent=BSGatlas-transcript-172;comment="5'UTR" basu168 BSGatlas gene 178665 179585 . + . ID=BSGatlas-gene-222;color=#1E90FF;Name=ybaS;locus_tag=BSU_01590,BSU01590 basu168 BSGatlas CDS 178665 179585 . + 0 ID=BSGatlas-gene-222_transcribed;color=#1E90FF;Name=ybaS;Parent=BSGatlas-transcript-172;comment="putative sodium dependent transporter";go="GO:0005886 plasma membrane,GO:0006869 lipid transport,GO:0008508 bile acid:sodium symporter activity,GO:0015721 bile acid and bile salt transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0035725 sodium ion transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybaS";derives_from=BSGatlas-gene-222 basu168 BSGatlas transcript 179576 183364 . - . ID=BSGatlas-transcript-175;color=#B37924;Parent=BSGatlas-gene-226,BSGatlas-gene-225,BSGatlas-gene-224,BSGatlas-gene-223;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 179576 183361 . - . ID=BSGatlas-transcript-174;color=#B37924;Parent=BSGatlas-gene-226,BSGatlas-gene-225,BSGatlas-gene-224,BSGatlas-gene-223;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 179576 183358 . - . ID=BSGatlas-transcript-173;color=#B37924;Parent=BSGatlas-gene-226,BSGatlas-gene-225,BSGatlas-gene-224,BSGatlas-gene-223;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 179576 179594 . - . ID=BSGatlas-3'UTR-47;Parent=BSGatlas-transcript-173,BSGatlas-transcript-174,BSGatlas-transcript-175;comment="3'UTR" basu168 BSGatlas gene 179595 180347 . - . ID=BSGatlas-gene-223;color=#3474B3;Name=ybbA;locus_tag=BSU_01600,BSU01600 basu168 BSGatlas CDS 179595 180347 . - 0 ID=BSGatlas-gene-223_transcribed;color=#3474B3;Name=ybbA;Parent=BSGatlas-transcript-173,BSGatlas-transcript-174,BSGatlas-transcript-175;comment="iron-chelator (enterobactin family) esterase";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.3 Acquisition of iron / Other,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.1 Acquisition of iron / Other";synonyms="ybbA";derives_from=BSGatlas-gene-223 basu168 BSGatlas gene 180344 181354 . - . ID=BSGatlas-gene-224;color=#3474B3;Name=feuC;locus_tag=BSU_01610,BSU01610 basu168 BSGatlas CDS 180344 181354 . - 0 ID=BSGatlas-gene-224_transcribed;color=#3474B3;Name=feuC;Parent=BSGatlas-transcript-173,BSGatlas-transcript-174,BSGatlas-transcript-175;comment="iron-uptake protein";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055072 iron ion homeostasis";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="feuC";derives_from=BSGatlas-gene-224 basu168 BSGatlas gene 181347 182351 . - . ID=BSGatlas-gene-225;color=#3474B3;Name=feuB;locus_tag=BSU_01620,BSU01620 basu168 BSGatlas CDS 181347 182351 . - 0 ID=BSGatlas-gene-225_transcribed;color=#3474B3;Name=feuB;Parent=BSGatlas-transcript-173,BSGatlas-transcript-174,BSGatlas-transcript-175;comment="ferri-bacillibactin permease";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055072 iron ion homeostasis";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="feuB";derives_from=BSGatlas-gene-225 basu168 BSGatlas UTR 182352 182369 . - . ID=BSGatlas-internal_UTR-88;Parent=BSGatlas-transcript-173,BSGatlas-transcript-174,BSGatlas-transcript-175;comment="internal_UTR" basu168 BSGatlas gene 182370 183323 . - . ID=BSGatlas-gene-226;color=#3474B3;Name=feuA;locus_tag=BSU_01630,BSU01630 basu168 BSGatlas CDS 182370 183323 . - 0 ID=BSGatlas-gene-226_transcribed;color=#3474B3;Name=feuA;Parent=BSGatlas-transcript-173,BSGatlas-transcript-174,BSGatlas-transcript-175;comment="ferri-bacillibactin-binding lipoprotein";go="GO:0005737 cytoplasm,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0016020 membrane,GO:0055072 iron ion homeostasis";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.2 Membrane proteins";synonyms="feuA";derives_from=BSGatlas-gene-226 basu168 BSGatlas UTR 183324 183364 . - . ID=BSGatlas-5'UTR-92;Parent=BSGatlas-transcript-175;comment="5'UTR" basu168 BSGatlas UTR 183324 183361 . - . ID=BSGatlas-5'UTR-91;Parent=BSGatlas-transcript-174;comment="5'UTR" basu168 BSGatlas UTR 183324 183358 . - . ID=BSGatlas-5'UTR-90;Parent=BSGatlas-transcript-173;comment="5'UTR" basu168 BSGatlas transcript 183414 185056 . - . ID=BSGatlas-transcript-176;color=#B37924;Parent=BSGatlas-gene-227;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 183414 185003 . - . ID=BSGatlas-gene-227;color=#3474B3;Name=btr;locus_tag=BSU_01640,BSU01640 basu168 BSGatlas CDS 183414 185003 . - 0 ID=BSGatlas-gene-227_transcribed;color=#3474B3;Name=btr;Parent=BSGatlas-transcript-176;comment="transcriptional activator (AraC/XylS family) ofsynthesis and uptake of the siderophore bacillibactin";go="GO:0000986 bacterial-type proximal promoter sequence-specific DNA binding,GO:0001140 transcriptional activator activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding,GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding,GO:2000144 positive regulation of DNA-templated transcription, initiation";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.3 Acquisition of iron / Other,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.1 Acquisition of iron / Other,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="btr,ybbB,yzbC";derives_from=BSGatlas-gene-227 basu168 BSGatlas UTR 185004 185056 . - . ID=BSGatlas-5'UTR-93;Parent=BSGatlas-transcript-176;comment="5'UTR" basu168 BSGatlas transcript 185143 193009 . - . ID=BSGatlas-transcript-177;color=#B37924;Parent=BSGatlas-gene-233,BSGatlas-gene-232,BSGatlas-gene-231,BSGatlas-gene-230,BSGatlas-gene-229,BSGatlas-gene-228;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 185143 185193 . - . ID=BSGatlas-3'UTR-48;Parent=BSGatlas-transcript-177;comment="3'UTR" basu168 BSGatlas transcript 185194 193009 . - . ID=BSGatlas-transcript-178;color=#B37924;Parent=BSGatlas-gene-233,BSGatlas-gene-232,BSGatlas-gene-231,BSGatlas-gene-230,BSGatlas-gene-229,BSGatlas-gene-228;comment="Based on: SubtiWiki" basu168 BSGatlas gene 185194 186438 . - . ID=BSGatlas-gene-228;color=#3474B3;Name=ybbC;locus_tag=BSU_01650,BSU01650 basu168 BSGatlas CDS 185194 186438 . - 0 ID=BSGatlas-gene-228_transcribed;color=#3474B3;Name=ybbC;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="ybbC,yzbB";derives_from=BSGatlas-gene-228 basu168 BSGatlas gene 186452 188380 . - . ID=BSGatlas-gene-229;color=#3474B3;Name=nagZ;locus_tag=BSU_01660,BSU01660 basu168 BSGatlas CDS 186452 188380 . - 0 ID=BSGatlas-gene-229_transcribed;color=#3474B3;Name=nagZ;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="N-acetylglucosaminidase lipoprotein";ec="3.2.1.52,EC-3.2.1.52";go="GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0005886 plasma membrane,GO:0005975 carbohydrate metabolic process,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),beta-Lactam resistance (ko01501),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components";synonyms="nagZ,ybbD,yzbA";derives_from=BSGatlas-gene-229 basu168 BSGatlas UTR 188381 188407 . - . ID=BSGatlas-internal_UTR-89;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="internal_UTR" basu168 BSGatlas gene 188408 189733 . - . ID=BSGatlas-gene-230;color=#3474B3;Name=amiE;locus_tag=BSU_01670,BSU01670 basu168 BSGatlas CDS 188408 189733 . - 0 ID=BSGatlas-gene-230_transcribed;color=#3474B3;Name=amiE;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="amidase hydrolyzing N-acetylmuramyl-L-Ala bondof MurNAc peptides";kegg_pathways="Peptidoglycan biosynthesis (ko00550)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components";synonyms="amiE,ybbE";derives_from=BSGatlas-gene-230 basu168 BSGatlas UTR 189734 189789 . - . ID=BSGatlas-internal_UTR-90;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="internal_UTR" basu168 BSGatlas gene 189790 191157 . - . ID=BSGatlas-gene-231;color=#3474B3;Name=murP;locus_tag=BSU_01680,BSU01680 basu168 BSGatlas CDS 189790 191157 . - 0 ID=BSGatlas-gene-231_transcribed;color=#3474B3;Name=murP;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="N-acetylmuramic acid PTS permease-MurP subunit";ec="2.7.1.192,2.7.1.69,EC-2.7.1.69";go="GO:0005351 carbohydrate:proton symporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015992 NA,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport";kegg_pathways="Phosphotransferase system (PTS) (ko02060),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.17 Utilization of amino sugars,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.3 Utilization of amino sugars,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue";synonyms="murP,ybbF";derives_from=BSGatlas-gene-231 basu168 BSGatlas UTR 191158 191182 . - . ID=BSGatlas-internal_UTR-91;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="internal_UTR" basu168 BSGatlas gene 191183 192034 . - . ID=BSGatlas-gene-232;color=#3474B3;Name=murR;locus_tag=BSU_01690,BSU01690 basu168 BSGatlas CDS 191183 192034 . - 0 ID=BSGatlas-gene-232_transcribed;color=#3474B3;Name=murR;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="transcriptional regulator MurR-N-acetylmuramicacid";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005975 carbohydrate metabolic process,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0030246 carbohydrate binding";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.17 Utilization of amino sugars,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.3 Utilization of amino sugars,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="murR,ybbH";derives_from=BSGatlas-gene-232 basu168 BSGatlas UTR 192035 192050 . - . ID=BSGatlas-internal_UTR-92;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="internal_UTR" basu168 BSGatlas gene 192051 192965 . - . ID=BSGatlas-gene-233;color=#3474B3;Name=murQ;locus_tag=BSU_01700,BSU01700 basu168 BSGatlas CDS 192051 192965 . - 0 ID=BSGatlas-gene-233_transcribed;color=#3474B3;Name=murQ;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="D-lactyl ether N-acetylmuramic-6-phosphate acidetherase";ec="4.2.1.126";go="GO:0005975 carbohydrate metabolic process,GO:0006040 amino sugar metabolic process,GO:0016829 lyase activity,GO:0016835 carbon-oxygen lyase activity,GO:0030246 carbohydrate binding,GO:0046348 amino sugar catabolic process,GO:0097173 N-acetylmuramic acid catabolic process";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.17 Utilization of amino sugars,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.3 Utilization of amino sugars,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="murQ,ybbI";derives_from=BSGatlas-gene-233 basu168 BSGatlas UTR 192966 193009 . - . ID=BSGatlas-5'UTR-94;Parent=BSGatlas-transcript-177,BSGatlas-transcript-178;comment="5'UTR" basu168 BSGatlas gene 193075 193557 . - . ID=BSGatlas-gene-234;color=#3474B3;Name=ybbJ;locus_tag=BSU_01710,BSU01710 basu168 BSGatlas CDS 193075 193557 . - 0 ID=BSGatlas-gene-234_transcribed;color=#3474B3;Name=ybbJ;comment="putative acyltransferase";go="GO:0008080 N-acetyltransferase activity,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybbJ";derives_from=BSGatlas-gene-234 basu168 BSGatlas transcript 193570 194072 . - . ID=BSGatlas-transcript-179;color=#B37924;Parent=BSGatlas-gene-235;comment="Based on: BSGatlas" basu168 BSGatlas gene 193570 194025 . - . ID=BSGatlas-gene-235;color=#3474B3;Name=ybbK;locus_tag=BSU_01720,BSU01720 basu168 BSGatlas CDS 193570 194025 . - 0 ID=BSGatlas-gene-235_transcribed;color=#3474B3;Name=ybbK;Parent=BSGatlas-transcript-179;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybbK";derives_from=BSGatlas-gene-235 basu168 BSGatlas UTR 194026 194072 . - . ID=BSGatlas-5'UTR-95;Parent=BSGatlas-transcript-179;comment="5'UTR" basu168 BSGatlas transcript 194178 194661 . + . ID=BSGatlas-transcript-180;color=#FF9900;Parent=BSGatlas-gene-236,BSGatlas-gene-237,BSGatlas-gene-238,BSGatlas-gene-239,BSGatlas-gene-240;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 194178 194203 . + . ID=BSGatlas-5'UTR-96;Parent=BSGatlas-transcript-180;comment="5'UTR" basu168 BSGatlas gene 194204 194279 . + . ID=BSGatlas-gene-236;color=#FFFF00;Name=trnSL-Glu2;locus_tag=BSU_tRNA_75,BSU_TRNA_75 basu168 BSGatlas tRNA 194204 194279 . + . ID=BSGatlas-gene-236_transcribed;color=#FFFF00;Name=trnSL-Glu2;Parent=BSGatlas-transcript-180;comment="tRNA-Glu";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Glu2";derives_from=BSGatlas-gene-236 basu168 BSGatlas gene 194282 194358 . + . ID=BSGatlas-gene-237;color=#FFFF00;Name=trnSL-Val1;locus_tag=BSU_tRNA_78,BSU_TRNA_78 basu168 BSGatlas tRNA 194282 194358 . + . ID=BSGatlas-gene-237_transcribed;color=#FFFF00;Name=trnSL-Val1;Parent=BSGatlas-transcript-180;comment="tRNA-Val";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Val1";derives_from=BSGatlas-gene-237 basu168 BSGatlas gene 194362 194435 . + . ID=BSGatlas-gene-238;color=#FFFF00;Name=trnSL-Thr1;locus_tag=BSU_tRNA_76,BSU_TRNA_76 basu168 BSGatlas tRNA 194362 194435 . + . ID=BSGatlas-gene-238_transcribed;color=#FFFF00;Name=trnSL-Thr1;Parent=BSGatlas-transcript-180;comment="tRNA-Thr";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Thr1";derives_from=BSGatlas-gene-238 basu168 BSGatlas UTR 194436 194456 . + . ID=BSGatlas-internal_UTR-93;Parent=BSGatlas-transcript-180;comment="internal_UTR" basu168 BSGatlas gene 194457 194542 . + . ID=BSGatlas-gene-239;color=#FFFF00;Name=trnSL-Tyr1;locus_tag=BSU_tRNA_77,BSU_TRNA_77 basu168 BSGatlas tRNA 194457 194542 . + . ID=BSGatlas-gene-239_transcribed;color=#FFFF00;Name=trnSL-Tyr1;Parent=BSGatlas-transcript-180;comment="tRNA-Tyr";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Tyr1";derives_from=BSGatlas-gene-239 basu168 BSGatlas gene 194546 194621 . + . ID=BSGatlas-gene-240;color=#FFFF00;Name=trnSL-Gln2;locus_tag=BSU_tRNA_74,BSU_TRNA_74 basu168 BSGatlas tRNA 194546 194621 . + . ID=BSGatlas-gene-240_transcribed;color=#FFFF00;Name=trnSL-Gln2;Parent=BSGatlas-transcript-180;comment="tRNA-Gln";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnSL-Gln2";derives_from=BSGatlas-gene-240 basu168 BSGatlas UTR 194622 194661 . + . ID=BSGatlas-3'UTR-49;Parent=BSGatlas-transcript-180;comment="3'UTR" basu168 BSGatlas transcript 194788 196088 . + . ID=BSGatlas-transcript-181;color=#FF9900;Parent=BSGatlas-gene-241,BSGatlas-gene-242;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 194788 194848 . + . ID=BSGatlas-5'UTR-97;Parent=BSGatlas-transcript-181;comment="5'UTR" basu168 BSGatlas transcript 194821 196088 . + . ID=BSGatlas-transcript-182;color=#FF9900;Parent=BSGatlas-gene-241,BSGatlas-gene-242;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 194821 194848 . + . ID=BSGatlas-5'UTR-98;Parent=BSGatlas-transcript-182;comment="5'UTR" basu168 BSGatlas gene 194849 195412 . + . ID=BSGatlas-gene-241;color=#1E90FF;Name=sigW;locus_tag=BSU_01730,BSU01730 basu168 BSGatlas CDS 194849 195412 . + 0 ID=BSGatlas-gene-241_transcribed;color=#1E90FF;Name=sigW;Parent=BSGatlas-transcript-181,BSGatlas-transcript-182;comment="RNA polymerase ECF(extracytoplasmicfunction)-type sigma factor W";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006352 DNA-templated transcription, initiation,GO:0006355 regulation of transcription, DNA-templated,GO:0006950 response to stress,GO:0016987 sigma factor activity";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.2 Sigma factors,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.1 Sigma factors,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="sigW,ybbL";derives_from=BSGatlas-gene-241 basu168 BSGatlas gene 195426 196052 . + . ID=BSGatlas-gene-242;color=#1E90FF;Name=rsiW;locus_tag=BSU_01740,BSU01740 basu168 BSGatlas CDS 195426 196052 . + 0 ID=BSGatlas-gene-242_transcribed;color=#1E90FF;Name=rsiW;Parent=BSGatlas-transcript-181,BSGatlas-transcript-182;comment="anti-sigma(W) factor";go="GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0006950 response to stress,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="rsiW,ybbM";derives_from=BSGatlas-gene-242 basu168 BSGatlas UTR 196053 196088 . + . ID=BSGatlas-3'UTR-50;Parent=BSGatlas-transcript-181,BSGatlas-transcript-182;comment="3'UTR" basu168 BSGatlas transcript 196132 202079 . + . ID=BSGatlas-transcript-184;color=#FF9900;Parent=BSGatlas-gene-243,BSGatlas-gene-244,BSGatlas-gene-245,BSGatlas-gene-246,BSGatlas-gene-247;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 196132 199860 . + . ID=BSGatlas-transcript-183;color=#FF9900;Parent=BSGatlas-gene-243,BSGatlas-gene-244,BSGatlas-gene-245;comment="Based on: BsubCyc" basu168 BSGatlas UTR 196132 196212 . + . ID=BSGatlas-5'UTR-99;Parent=BSGatlas-transcript-183,BSGatlas-transcript-184;comment="5'UTR" basu168 BSGatlas gene 196213 197034 . + . ID=BSGatlas-gene-243;color=#1E90FF;Name=cdaA;locus_tag=BSU_01750,BSU01750 basu168 BSGatlas CDS 196213 197034 . + 0 ID=BSGatlas-gene-243_transcribed;color=#1E90FF;Name=cdaA;Parent=BSGatlas-transcript-183,BSGatlas-transcript-184;comment="diadenylate cyclase";ec="2.7.7.85,EC-2.7.7.85";go="GO:0005515 protein binding,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.3 Metabolism of signalling nucleotides,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="cdaA,ybbP,ybbQ";derives_from=BSGatlas-gene-243 basu168 BSGatlas gene 197027 198478 . + . ID=BSGatlas-gene-244;color=#1E90FF;Name=cdaR;locus_tag=BSU_01760,BSU01760 basu168 BSGatlas CDS 197027 198478 . + 0 ID=BSGatlas-gene-244_transcribed;color=#1E90FF;Name=cdaR;Parent=BSGatlas-transcript-183,BSGatlas-transcript-184;comment="regulator of diadenylate cyclase activity";go="GO:0005515 protein binding";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.3 Metabolism of signalling nucleotides";synonyms="cdaR,ybbR";derives_from=BSGatlas-gene-244 basu168 BSGatlas UTR 198479 198496 . + . ID=BSGatlas-internal_UTR-94;Parent=BSGatlas-transcript-183,BSGatlas-transcript-184;comment="internal_UTR" basu168 BSGatlas gene 198497 199843 . + . ID=BSGatlas-gene-245;color=#1E90FF;Name=glmM;locus_tag=BSU_01770,BSU01770 basu168 BSGatlas CDS 198497 199843 . + 0 ID=BSGatlas-gene-245_transcribed;color=#1E90FF;Name=glmM;Parent=BSGatlas-transcript-183,BSGatlas-transcript-184;comment="phosphoglucosamine mutase";ec="5.4.2.10,EC-5.4.2.10";go="GO:0000287 magnesium ion binding,GO:0005829 cytosol,GO:0005975 carbohydrate metabolic process,GO:0006048 UDP-N-acetylglucosamine biosynthetic process,GO:0008966 phosphoglucosamine mutase activity,GO:0016853 isomerase activity,GO:0016868 intramolecular transferase activity, phosphotransferases,GO:0046872 metal ion binding";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="glmM,ybbT";derives_from=BSGatlas-gene-245 basu168 BSGatlas UTR 199844 200015 . + . ID=BSGatlas-internal_UTR-95;Parent=BSGatlas-transcript-184;comment="internal_UTR" basu168 BSGatlas UTR 199844 199860 . + . ID=BSGatlas-3'UTR-51;Parent=BSGatlas-transcript-183;comment="3'UTR" basu168 BSGatlas transcript 199878 202079 . + . ID=BSGatlas-transcript-185;color=#FF9900;Parent=BSGatlas-gene-247;comment="Based on: BsubCyc" basu168 BSGatlas UTR 199878 200276 . + . ID=BSGatlas-5'UTR-100;Parent=BSGatlas-transcript-185;comment="5'UTR" basu168 BSGatlas transcript 199957 202079 . + . ID=BSGatlas-transcript-186;color=#FF9900;Parent=BSGatlas-gene-247;comment="Based on: BsubCyc" basu168 BSGatlas UTR 199957 200276 . + . ID=BSGatlas-5'UTR-101;Parent=BSGatlas-transcript-186;comment="5'UTR" basu168 BSGatlas transcript 200014 202079 . + . ID=BSGatlas-transcript-187;color=#FF9900;Parent=BSGatlas-gene-247;comment="Based on: BsubCyc" basu168 BSGatlas UTR 200014 200276 . + . ID=BSGatlas-5'UTR-102;Parent=BSGatlas-transcript-187;comment="5'UTR" basu168 BSGatlas gene 200016 200187 . + . ID=BSGatlas-gene-246;color=#999999;Name=glmS ribozyme;locus_tag=BSU_misc_RNA_5 basu168 BSGatlas riboswitch 200016 200187 . + . ID=BSGatlas-gene-246_transcribed;color=#999999;Name=glmS ribozyme;Parent=BSGatlas-transcript-184;comment="riboswitch and ribozyme (GlmS-glucosamine-6-P)";synonyms="glmS ribozyme,NA";derives_from=BSGatlas-gene-246 basu168 BSGatlas UTR 200188 200276 . + . ID=BSGatlas-internal_UTR-96;Parent=BSGatlas-transcript-184;comment="internal_UTR" basu168 BSGatlas gene 200277 202079 . + . ID=BSGatlas-gene-247;color=#1E90FF;Name=glmS;locus_tag=BSU_01780,BSU01780 basu168 BSGatlas CDS 200277 202079 . + 0 ID=BSGatlas-gene-247_transcribed;color=#1E90FF;Name=glmS;Parent=BSGatlas-transcript-184,BSGatlas-transcript-185,BSGatlas-transcript-186,BSGatlas-transcript-187;comment="L-glutamine-D-fructose-6-phosphateamidotransferase";ec="2.6.1.16,EC-2.6.1.16";go="GO:0004360 glutamine-fructose-6-phosphate transaminase (isomerizing) activity,GO:0005737 cytoplasm,GO:0005975 carbohydrate metabolic process,GO:0006541 glutamine metabolic process,GO:0008152 metabolic process,GO:0008483 transaminase activity,GO:0016051 carbohydrate biosynthetic process,GO:0016740 transferase activity,GO:0030246 carbohydrate binding";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Amino sugar and nucleotide sugar metabolism (ko00520),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="gcaA,glmS,ybxD";derives_from=BSGatlas-gene-247 basu168 BSGatlas gene 202126 202266 . + . ID=BSGatlas-gene-248;color=#1E90FF;Name=ybbU;locus_tag=BSU_01790 basu168 BSGatlas CDS 202126 202266 . + 0 ID=BSGatlas-gene-248_transcribed;color=#1E90FF;Name=ybbU;comment="hypothetical protein";synonyms="NA,ybbU";derives_from=BSGatlas-gene-248 basu168 BSGatlas transcript 202547 203507 . - . ID=BSGatlas-transcript-4836;color=#B37924;Parent=BSGatlas-gene-249;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 202547 203458 . - . ID=BSGatlas-gene-249;color=#3474B3;Name=alkA;locus_tag=BSU_01800,BSU01800 basu168 BSGatlas CDS 202547 203458 . - 0 ID=BSGatlas-gene-249_transcribed;color=#3474B3;Name=alkA;Parent=BSGatlas-transcript-4836;comment="DNA-3-methyladenine glycosylase; prophage 1region";ec="3.2.2.21,EC-3.2.2.21";go="GO:0003684 damaged DNA binding,GO:0003824 catalytic activity,GO:0003905 alkylbase DNA N-glycosylase activity,GO:0006281 DNA repair,GO:0006284 base-excision repair,GO:0006289 nucleotide-excision repair,GO:0006974 cellular response to DNA damage stimulus,GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity,GO:0008725 DNA-3-methyladenine glycosylase activity,GO:0016787 hydrolase activity,GO:0043916 DNA-7-methylguanine glycosylase activity,GO:0052821 DNA-7-methyladenine glycosylase activity,GO:0052822 DNA-3-methylguanine glycosylase activity";kegg_pathways="Base excision repair (ko03410)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1";synonyms="alkA";derives_from=BSGatlas-gene-249 basu168 BSGatlas UTR 203459 203507 . - . ID=BSGatlas-5'UTR-103;Parent=BSGatlas-transcript-4836;comment="5'UTR" basu168 BSGatlas transcript 203608 204890 . + . ID=BSGatlas-transcript-189;color=#FF9900;Parent=BSGatlas-gene-250,BSGatlas-gene-251;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 203608 203728 . + . ID=BSGatlas-5'UTR-104;Parent=BSGatlas-transcript-189;comment="5'UTR" basu168 BSGatlas gene 203729 204364 . + . ID=BSGatlas-gene-250;color=#1E90FF;Name=adaA;locus_tag=BSU_01810,BSU01810 basu168 BSGatlas CDS 203729 204364 . + 0 ID=BSGatlas-gene-250_transcribed;color=#1E90FF;Name=adaA;Parent=BSGatlas-transcript-189;comment="methylphosphotriester-DNA alkyltransferase andtranscriptional regulator (AraC/XylS family)";ec="2.1.1.63,EC-2.1.1.63";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006281 DNA repair,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0006974 cellular response to DNA damage stimulus,GO:0008168 methyltransferase activity,GO:0008270 zinc ion binding,GO:0016740 transferase activity,GO:0032259 methylation,GO:0043565 sequence-specific DNA binding,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 3.4.3 Trigger enzyme,SW 3.4.3.3 Trigger enzymes that act directly as transcription factors by binding DNA,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1";synonyms="adaA";derives_from=BSGatlas-gene-250 basu168 BSGatlas gene 204351 204890 . + . ID=BSGatlas-gene-251;color=#1E90FF;Name=adaB;locus_tag=BSU_01820,BSU01820 basu168 BSGatlas CDS 204351 204890 . + 0 ID=BSGatlas-gene-251_transcribed;color=#1E90FF;Name=adaB;Parent=BSGatlas-transcript-189;comment="O6-methylguanine-DNA methyltransferase; prophage1 region";ec="2.1.1.63,EC-2.1.1.63";go="GO:0003824 catalytic activity,GO:0003908 methylated-DNA-[protein]-cysteine S-methyltransferase activity,GO:0006281 DNA repair,GO:0006974 cellular response to DNA damage stimulus,GO:0008168 methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1";synonyms="adaB";derives_from=BSGatlas-gene-251 basu168 BSGatlas transcript 204977 205308 . + . ID=BSGatlas-transcript-191;color=#FF9900;Parent=BSGatlas-gene-252;comment="Based on: BSGatlas" basu168 BSGatlas gene 204977 205210 . + . ID=BSGatlas-gene-252;color=#CC0000;Name=S72;locus_tag=new_204977_205210 basu168 BSGatlas transcript 204977 205210 . + . ID=BSGatlas-transcript-190;color=#FF9900;Parent=BSGatlas-gene-252;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 204977 205210 . + . ID=BSGatlas-gene-252_transcribed;color=#CC0000;Name=S72;Parent=BSGatlas-transcript-190,BSGatlas-transcript-191;synonyms="S72";derives_from=BSGatlas-gene-252 basu168 BSGatlas UTR 205211 205308 . + . ID=BSGatlas-3'UTR-1654;Parent=BSGatlas-transcript-191;comment="3'UTR" basu168 BSGatlas transcript 205409 210946 . + . ID=BSGatlas-transcript-192;color=#FF9900;Parent=BSGatlas-gene-253,BSGatlas-gene-254,BSGatlas-gene-255,BSGatlas-gene-256,BSGatlas-gene-257;comment="Based on: SubtiWiki" basu168 BSGatlas gene 205409 206926 . + . ID=BSGatlas-gene-253;color=#1E90FF;Name=ndhF;locus_tag=BSU_01830,BSU01830 basu168 BSGatlas CDS 205409 206926 . + 0 ID=BSGatlas-gene-253_transcribed;color=#1E90FF;Name=ndhF;Parent=BSGatlas-transcript-192;comment="putative NADH dehydrogenase; prophage 1 region";ec="1.6.-.-";go="GO:0005886 plasma membrane,GO:0008137 NADH dehydrogenase (ubiquinone) activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016491 oxidoreductase activity,GO:0048038 quinone binding,GO:0050136 NADH dehydrogenase (quinone) activity,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Oxidative phosphorylation (ko00190)";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.2 Respiration,SW 2.1.2.4 Respiration/ other,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ndhF,ybxE";derives_from=BSGatlas-gene-253 basu168 BSGatlas gene 206941 209556 . + . ID=BSGatlas-gene-254;color=#1E90FF;Name=ybcC;locus_tag=BSU_01845,BSU01845 basu168 BSGatlas CDS 206941 209556 . + 0 ID=BSGatlas-gene-254_transcribed;color=#1E90FF;Name=ybcC;Parent=BSGatlas-transcript-192;comment="conserved transmembrane protein coupled toNADH-ubiquinone oxidoreductase chain 5 homolog; prophage 1region";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybcC,ybcD";derives_from=BSGatlas-gene-254 basu168 BSGatlas UTR 209557 209632 . + . ID=BSGatlas-internal_UTR-97;Parent=BSGatlas-transcript-192;comment="internal_UTR" basu168 BSGatlas gene 209633 210160 . + . ID=BSGatlas-gene-255;color=#1E90FF;Name=ybcF;locus_tag=BSU_01860,BSU01860 basu168 BSGatlas CDS 209633 210160 . + 0 ID=BSGatlas-gene-255_transcribed;color=#1E90FF;Name=ybcF;Parent=BSGatlas-transcript-192;comment="putative enzyme; prophage 1 region";ec="EC-4.2.1.1";go="GO:0004089 carbonate dehydratase activity,GO:0008152 metabolic process,GO:0008270 zinc ion binding";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ybcF";derives_from=BSGatlas-gene-255 basu168 BSGatlas UTR 210161 210223 . + . ID=BSGatlas-internal_UTR-98;Parent=BSGatlas-transcript-192;comment="internal_UTR" basu168 BSGatlas gene 210224 210514 . + . ID=BSGatlas-gene-256;color=#1E90FF;Name=ybcH;locus_tag=BSU_01870,BSU01870 basu168 BSGatlas CDS 210224 210514 . + 0 ID=BSGatlas-gene-256_transcribed;color=#1E90FF;Name=ybcH;Parent=BSGatlas-transcript-192;comment="conserved protein of unknown function; prophage1 region";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybcH";derives_from=BSGatlas-gene-256 basu168 BSGatlas UTR 210515 210571 . + . ID=BSGatlas-internal_UTR-99;Parent=BSGatlas-transcript-192;comment="internal_UTR" basu168 BSGatlas gene 210572 210946 . + . ID=BSGatlas-gene-257;color=#1E90FF;Name=ybcI;locus_tag=BSU_01880,BSU01880 basu168 BSGatlas CDS 210572 210946 . + 0 ID=BSGatlas-gene-257_transcribed;color=#1E90FF;Name=ybcI;Parent=BSGatlas-transcript-192;comment="conserved hypothetical protein; prophage 1region";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybcI";derives_from=BSGatlas-gene-257 basu168 BSGatlas transcript 211414 211746 . + . ID=BSGatlas-transcript-193;color=#FF9900;Parent=BSGatlas-gene-258;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 211414 211428 . + . ID=BSGatlas-5'UTR-105;Parent=BSGatlas-transcript-193;comment="5'UTR" basu168 BSGatlas gene 211429 211731 . + . ID=BSGatlas-gene-258;color=#1E90FF;Name=ybzH;locus_tag=BSU_01889,BSU01889 basu168 BSGatlas CDS 211429 211731 . + 0 ID=BSGatlas-gene-258_transcribed;color=#1E90FF;Name=ybzH;Parent=BSGatlas-transcript-193;comment="putative transcriptional regulator (ArsRfamily); prophage 1 region";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1";synonyms="ybzH";derives_from=BSGatlas-gene-258 basu168 BSGatlas UTR 211732 211746 . + . ID=BSGatlas-3'UTR-54;Parent=BSGatlas-transcript-193;comment="3'UTR" basu168 BSGatlas transcript 211859 213086 . + . ID=BSGatlas-transcript-195;color=#FF9900;Parent=BSGatlas-gene-259;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 211859 213031 . + . ID=BSGatlas-gene-259;color=#1E90FF;Name=ybcL;locus_tag=BSU_01890,BSU01890 basu168 BSGatlas transcript 211859 213031 . + . ID=BSGatlas-transcript-194;color=#FF9900;Parent=BSGatlas-gene-259;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas CDS 211859 213031 . + 0 ID=BSGatlas-gene-259_transcribed;color=#1E90FF;Name=ybcL;Parent=BSGatlas-transcript-194,BSGatlas-transcript-195;comment="putative efflux transporter; prophage 1 region";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybcL";derives_from=BSGatlas-gene-259 basu168 BSGatlas UTR 213032 213086 . + . ID=BSGatlas-3'UTR-55;Parent=BSGatlas-transcript-195;comment="3'UTR" basu168 BSGatlas gene 213155 213469 . + . ID=BSGatlas-gene-260;color=#1E90FF;Name=ybcM;locus_tag=BSU_01900,BSU01900 basu168 BSGatlas transcript 213155 213469 . + . ID=BSGatlas-transcript-196;color=#FF9900;Parent=BSGatlas-gene-260;comment="Based on: BSGatlas" basu168 BSGatlas CDS 213155 213469 . + 0 ID=BSGatlas-gene-260_transcribed;color=#1E90FF;Name=ybcM;Parent=BSGatlas-transcript-196;comment="putative enzyme";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Amino sugar and nucleotide sugar metabolism (ko00520),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybcM";derives_from=BSGatlas-gene-260 basu168 BSGatlas transcript 213888 220119 . + . ID=BSGatlas-transcript-198;color=#FF9900;Parent=BSGatlas-gene-261,BSGatlas-gene-262,BSGatlas-gene-263,BSGatlas-gene-264,BSGatlas-gene-265,BSGatlas-gene-266,BSGatlas-gene-267;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 213888 214163 . + . ID=BSGatlas-transcript-197;color=#FF9900;Parent=BSGatlas-gene-261;comment="Based on: BSGatlas" basu168 BSGatlas UTR 213888 213940 . + . ID=BSGatlas-5'UTR-106;Parent=BSGatlas-transcript-197,BSGatlas-transcript-198;comment="5'UTR" basu168 BSGatlas gene 213941 214108 . + . ID=BSGatlas-gene-261;color=#1E90FF;Name=skfA;locus_tag=BSU_01910,BSU01910 basu168 BSGatlas CDS 213941 214108 . + 0 ID=BSGatlas-gene-261_transcribed;color=#1E90FF;Name=skfA;Parent=BSGatlas-transcript-197,BSGatlas-transcript-198;comment="sporulation killing factor A";go="GO:0005576 extracellular region,GO:0042742 defense response to bacterium";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1";synonyms="skfA,ybcO";derives_from=BSGatlas-gene-261 basu168 BSGatlas UTR 214109 214174 . + . ID=BSGatlas-internal_UTR-100;Parent=BSGatlas-transcript-198;comment="internal_UTR" basu168 BSGatlas UTR 214109 214163 . + . ID=BSGatlas-3'UTR-56;Parent=BSGatlas-transcript-197;comment="3'UTR" basu168 BSGatlas gene 214175 215407 . + . ID=BSGatlas-gene-262;color=#1E90FF;Name=skfB;locus_tag=BSU_01920,BSU01920 basu168 BSGatlas CDS 214175 215407 . + 0 ID=BSGatlas-gene-262_transcribed;color=#1E90FF;Name=skfB;Parent=BSGatlas-transcript-198;comment="synthesis of sporulation killing factor A";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0046872 metal ion binding,GO:0051536 iron-sulfur cluster binding,GO:0051539 4 iron, 4 sulfur cluster binding";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1";synonyms="skfB,ybcP,ybcQ";derives_from=BSGatlas-gene-262 basu168 BSGatlas gene 215404 216894 . + . ID=BSGatlas-gene-263;color=#1E90FF;Name=skfC;locus_tag=BSU_01935,BSU01935 basu168 BSGatlas CDS 215404 216894 . + 0 ID=BSGatlas-gene-263_transcribed;color=#1E90FF;Name=skfC;Parent=BSGatlas-transcript-198;comment="sporulation killing factor biosynthesis andexport";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1";synonyms="skfC,skfD,ybcS,ybcT";derives_from=BSGatlas-gene-263 basu168 BSGatlas transcript 216321 220119 . + . ID=BSGatlas-transcript-199;color=#FF9900;Parent=BSGatlas-gene-264,BSGatlas-gene-265,BSGatlas-gene-266,BSGatlas-gene-267;comment="Based on: BSGatlas" basu168 BSGatlas UTR 216321 216912 . + . ID=BSGatlas-5'UTR-107;Parent=BSGatlas-transcript-199;comment="5'UTR" basu168 BSGatlas UTR 216895 216912 . + . ID=BSGatlas-internal_UTR-101;Parent=BSGatlas-transcript-198;comment="internal_UTR" basu168 BSGatlas gene 216913 217632 . + . ID=BSGatlas-gene-264;color=#1E90FF;Name=skfE;locus_tag=BSU_01950,BSU01950 basu168 BSGatlas CDS 216913 217632 . + 0 ID=BSGatlas-gene-264_transcribed;color=#1E90FF;Name=skfE;Parent=BSGatlas-transcript-198,BSGatlas-transcript-199;comment="sporulation killing factor biosynthesis andexport; ABC transporter (binding protein)";ec="3.6.3.25";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008152 metabolic process,GO:0015419 ATPase-coupled sulfate transmembrane transporter activity,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity,GO:1902358 sulfate transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.3 Export of peptides,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="skfE,ybdA";derives_from=BSGatlas-gene-264 basu168 BSGatlas UTR 217633 217696 . + . ID=BSGatlas-internal_UTR-102;Parent=BSGatlas-transcript-198,BSGatlas-transcript-199;comment="internal_UTR" basu168 BSGatlas gene 217697 219040 . + . ID=BSGatlas-gene-265;color=#1E90FF;Name=skfF;locus_tag=BSU_01960,BSU01960 basu168 BSGatlas CDS 217697 219040 . + 0 ID=BSGatlas-gene-265_transcribed;color=#1E90FF;Name=skfF;Parent=BSGatlas-transcript-198,BSGatlas-transcript-199;comment="sporulation killing factor biosynthesis andexport; ABC transporter (permease)";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.3 Export of peptides,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="skfF,ybdB";derives_from=BSGatlas-gene-265 basu168 BSGatlas UTR 219041 219086 . + . ID=BSGatlas-internal_UTR-103;Parent=BSGatlas-transcript-198,BSGatlas-transcript-199;comment="internal_UTR" basu168 BSGatlas gene 219087 219602 . + . ID=BSGatlas-gene-266;color=#1E90FF;Name=skfG;locus_tag=BSU_01970,BSU01970 basu168 BSGatlas CDS 219087 219602 . + 0 ID=BSGatlas-gene-266_transcribed;color=#1E90FF;Name=skfG;Parent=BSGatlas-transcript-198,BSGatlas-transcript-199;comment="sporulation killing factor biosynthesis andexport";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="skfG,ybdD";derives_from=BSGatlas-gene-266 basu168 BSGatlas gene 219607 220032 . + . ID=BSGatlas-gene-267;color=#1E90FF;Name=skfH;locus_tag=BSU_01980,BSU01980 basu168 BSGatlas CDS 219607 220032 . + 0 ID=BSGatlas-gene-267_transcribed;color=#1E90FF;Name=skfH;Parent=BSGatlas-transcript-198,BSGatlas-transcript-199;comment="sibling killing effect; sporulation killingfactor biosynthesis and export";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.4 Prophage 1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="skfH,ybdE";derives_from=BSGatlas-gene-267 basu168 BSGatlas UTR 220033 220119 . + . ID=BSGatlas-3'UTR-57;Parent=BSGatlas-transcript-198,BSGatlas-transcript-199;comment="3'UTR" basu168 BSGatlas gene 220279 221256 . + . ID=BSGatlas-gene-268;color=#1E90FF;Name=ybdG;locus_tag=BSU_01990,BSU01990 basu168 BSGatlas CDS 220279 221256 . + 0 ID=BSGatlas-gene-268_transcribed;color=#1E90FF;Name=ybdG;comment="putative hydrolase/transferase";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ybdG";derives_from=BSGatlas-gene-268 basu168 BSGatlas gene 221258 221929 . + . ID=BSGatlas-gene-269;color=#1E90FF;Name=ybdJ;locus_tag=BSU_02000,BSU02000 basu168 BSGatlas CDS 221258 221929 . + 0 ID=BSGatlas-gene-269_transcribed;color=#1E90FF;Name=ybdJ;comment="two-component system response regulator [YbdK]";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="ybdJ";derives_from=BSGatlas-gene-269 basu168 BSGatlas transcript 221861 222912 . + . ID=BSGatlas-transcript-200;color=#FF9900;Parent=BSGatlas-gene-270;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 221861 221949 . + . ID=BSGatlas-5'UTR-108;Parent=BSGatlas-transcript-200;comment="5'UTR" basu168 BSGatlas gene 221950 222912 . + . ID=BSGatlas-gene-270;color=#1E90FF;Name=ybdK;locus_tag=BSU_02010,BSU02010 basu168 BSGatlas CDS 221950 222912 . + 0 ID=BSGatlas-gene-270_transcribed;color=#1E90FF;Name=ybdK;Parent=BSGatlas-transcript-200;comment="two-component system sensor histidine kinase[YbdJ]";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0004871 NA,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="ybdK";derives_from=BSGatlas-gene-270 basu168 BSGatlas transcript 222945 223234 . + . ID=BSGatlas-transcript-201;color=#FF9900;Parent=BSGatlas-gene-271;comment="Based on: BSGatlas" basu168 BSGatlas UTR 222945 222970 . + . ID=BSGatlas-5'UTR-109;Parent=BSGatlas-transcript-201;comment="5'UTR" basu168 BSGatlas gene 222971 223234 . + . ID=BSGatlas-gene-271;color=#1E90FF;Name=ybzI;locus_tag=BSU_02019,BSU02019 basu168 BSGatlas CDS 222971 223234 . + 0 ID=BSGatlas-gene-271_transcribed;color=#1E90FF;Name=ybzI;Parent=BSGatlas-transcript-201;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybzI";derives_from=BSGatlas-gene-271 basu168 BSGatlas transcript 223219 224181 . - . ID=BSGatlas-transcript-202;color=#B37924;Parent=BSGatlas-gene-272;comment="Based on: BSGatlas" basu168 BSGatlas gene 223219 223989 . - . ID=BSGatlas-gene-272;color=#3474B3;Name=prkD;locus_tag=BSU_02030,BSU02030 basu168 BSGatlas CDS 223219 223989 . - 0 ID=BSGatlas-gene-272_transcribed;color=#3474B3;Name=prkD;Parent=BSGatlas-transcript-202;comment="putative protein kinase";ec="2.7.11.-,2.7.11.1,EC-2.7.11.21;EC-2.7.11.22;EC-2.7.11.13;EC-2.7.11.1;EC-2.7.11.17;EC-2.7.11.12";go="GO:0000166 nucleotide binding,GO:0004672 protein kinase activity,GO:0004674 protein serine/threonine kinase activity,GO:0005524 ATP binding,GO:0006468 protein phosphorylation,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.6 Phosphorylation on a Thr residue";synonyms="prkD,ybdM";derives_from=BSGatlas-gene-272 basu168 BSGatlas UTR 223990 224181 . - . ID=BSGatlas-5'UTR-110;Parent=BSGatlas-transcript-202;comment="5'UTR" basu168 BSGatlas transcript 224075 224970 . - . ID=BSGatlas-transcript-203;color=#B37924;Parent=BSGatlas-gene-273;comment="Based on: SubtiWiki" basu168 BSGatlas gene 224075 224932 . - . ID=BSGatlas-gene-273;color=#3474B3;Name=ybdN;locus_tag=BSU_02040,BSU02040 basu168 BSGatlas CDS 224075 224932 . - 0 ID=BSGatlas-gene-273_transcribed;color=#3474B3;Name=ybdN;Parent=BSGatlas-transcript-203;comment="putative phage protein; prophage region 1";subtiwiki_category="SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.7 Proteins of unknown function";synonyms="ybdN";derives_from=BSGatlas-gene-273 basu168 BSGatlas UTR 224933 224970 . - . ID=BSGatlas-5'UTR-111;Parent=BSGatlas-transcript-203;comment="5'UTR" basu168 BSGatlas transcript 225023 226289 . + . ID=BSGatlas-transcript-204;color=#FF9900;Parent=BSGatlas-gene-274;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 225023 225063 . + . ID=BSGatlas-5'UTR-112;Parent=BSGatlas-transcript-204;comment="5'UTR" basu168 BSGatlas gene 225064 226248 . + . ID=BSGatlas-gene-274;color=#1E90FF;Name=ybdO;locus_tag=BSU_02050,BSU02050 basu168 BSGatlas CDS 225064 226248 . + 0 ID=BSGatlas-gene-274_transcribed;color=#1E90FF;Name=ybdO;Parent=BSGatlas-transcript-204;comment="putative phage protein; prophage region 1";subtiwiki_category="SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.7 Proteins of unknown function";synonyms="ybdO";derives_from=BSGatlas-gene-274 basu168 BSGatlas UTR 226249 226289 . + . ID=BSGatlas-3'UTR-58;Parent=BSGatlas-transcript-204;comment="3'UTR" basu168 BSGatlas transcript 226436 227999 . + . ID=BSGatlas-transcript-205;color=#FF9900;Parent=BSGatlas-gene-275;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 226436 226565 . + . ID=BSGatlas-5'UTR-113;Parent=BSGatlas-transcript-205;comment="5'UTR" basu168 BSGatlas gene 226566 227954 . + . ID=BSGatlas-gene-275;color=#1E90FF;Name=ybxG;locus_tag=BSU_02060,BSU02060 basu168 BSGatlas CDS 226566 227954 . + 0 ID=BSGatlas-gene-275_transcribed;color=#1E90FF;Name=ybxG;Parent=BSGatlas-transcript-205;comment="putative amino acid permease";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0015171 amino acid transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.6 Biosynthesis/ acquisition of lysine/ threonine,SW 2.3.1.8 Biosynthesis/ acquisition of serine/ glycine/ alanine,SW 2.3.2 Utilization of amino acids,SW 2.3.2.8 Utilization of threonine/ glycine,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybdP,ybxG";derives_from=BSGatlas-gene-275 basu168 BSGatlas UTR 227955 227999 . + . ID=BSGatlas-3'UTR-59;Parent=BSGatlas-transcript-205;comment="3'UTR" basu168 BSGatlas transcript 228021 228557 . + . ID=BSGatlas-transcript-206;color=#FF9900;Parent=BSGatlas-gene-276,BSGatlas-gene-277;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 228021 228065 . + . ID=BSGatlas-5'UTR-114;Parent=BSGatlas-transcript-206;comment="5'UTR" basu168 BSGatlas gene 228066 228314 . + . ID=BSGatlas-gene-276;color=#1E90FF;Name=csgA;locus_tag=BSU_02070,BSU02070 basu168 BSGatlas CDS 228066 228314 . + 0 ID=BSGatlas-gene-276_transcribed;color=#1E90FF;Name=csgA;Parent=BSGatlas-transcript-206;comment="sporulation-specific SASP protein";go="GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.4 Germination,SW 4.2.4.2 Additional germination proteins";synonyms="csgA";derives_from=BSGatlas-gene-276 basu168 BSGatlas transcript 228230 229382 . - . ID=BSGatlas-transcript-207;color=#B37924;Parent=BSGatlas-gene-278;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 228230 228548 . - . ID=BSGatlas-3'UTR-60;Parent=BSGatlas-transcript-207;comment="3'UTR" basu168 BSGatlas UTR 228315 228330 . + . ID=BSGatlas-internal_UTR-104;Parent=BSGatlas-transcript-206;comment="internal_UTR" basu168 BSGatlas gene 228331 228522 . + . ID=BSGatlas-gene-277;color=#1E90FF;Name=ybxH;locus_tag=BSU_02080,BSU02080 basu168 BSGatlas CDS 228331 228522 . + 0 ID=BSGatlas-gene-277_transcribed;color=#1E90FF;Name=ybxH;Parent=BSGatlas-transcript-206;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="ybxH";derives_from=BSGatlas-gene-277 basu168 BSGatlas UTR 228523 228557 . + . ID=BSGatlas-3'UTR-61;Parent=BSGatlas-transcript-206;comment="3'UTR" basu168 BSGatlas gene 228549 229352 . - . ID=BSGatlas-gene-278;color=#3474B3;Name=ybxI;locus_tag=BSU_02090,BSU02090 basu168 BSGatlas CDS 228549 229352 . - 0 ID=BSGatlas-gene-278_transcribed;color=#3474B3;Name=ybxI;Parent=BSGatlas-transcript-207;comment="exported beta-lactamase";ec="3.5.2.6,EC-3.5.2.6";go="GO:0008658 penicillin binding,GO:0008800 beta-lactamase activity,GO:0016787 hydrolase activity,GO:0017001 antibiotic catabolic process,GO:0046677 response to antibiotic";kegg_pathways="beta-Lactam resistance (ko01501)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="ybdS,ybxI";derives_from=BSGatlas-gene-278 basu168 BSGatlas UTR 229353 229382 . - . ID=BSGatlas-5'UTR-115;Parent=BSGatlas-transcript-207;comment="5'UTR" basu168 BSGatlas transcript 229493 230826 . + . ID=BSGatlas-transcript-208;color=#FF9900;Parent=BSGatlas-gene-279;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 229493 229524 . + . ID=BSGatlas-5'UTR-116;Parent=BSGatlas-transcript-208;comment="5'UTR" basu168 BSGatlas transcript 229525 230826 . + . ID=BSGatlas-transcript-209;color=#FF9900;Parent=BSGatlas-gene-279;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 229525 230778 . + . ID=BSGatlas-gene-279;color=#1E90FF;Name=cypC;locus_tag=BSU_02100,BSU02100 basu168 BSGatlas CDS 229525 230778 . + 0 ID=BSGatlas-gene-279_transcribed;color=#1E90FF;Name=cypC;Parent=BSGatlas-transcript-208,BSGatlas-transcript-209;comment="fatty acid beta-hydroxylating cytochrome P450";ec="1.11.2.4";go="GO:0000303 response to superoxide,GO:0004497 monooxygenase activity,GO:0005506 iron ion binding,GO:0016491 oxidoreductase activity,GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,GO:0020037 heme binding,GO:0042542 response to hydrogen peroxide,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.3 Electron transport/ other,SW 2.4 Lipid metabolism,SW 2.4.3 Lipid metabolism/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="cypC,ybdT";derives_from=BSGatlas-gene-279 basu168 BSGatlas transcript 230772 231118 . - . ID=BSGatlas-transcript-210;color=#B37924;Parent=BSGatlas-gene-280;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 230772 230818 . - . ID=BSGatlas-3'UTR-62;Parent=BSGatlas-transcript-210;comment="3'UTR" basu168 BSGatlas UTR 230779 230826 . + . ID=BSGatlas-3'UTR-63;Parent=BSGatlas-transcript-208,BSGatlas-transcript-209;comment="3'UTR" basu168 BSGatlas gene 230819 231079 . - . ID=BSGatlas-gene-280;color=#3474B3;Name=ybyB;locus_tag=BSU_02110,BSU02110 basu168 BSGatlas CDS 230819 231079 . - 0 ID=BSGatlas-gene-280_transcribed;color=#3474B3;Name=ybyB;Parent=BSGatlas-transcript-210;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="ybyB";derives_from=BSGatlas-gene-280 basu168 BSGatlas UTR 231080 231118 . - . ID=BSGatlas-5'UTR-117;Parent=BSGatlas-transcript-210;comment="5'UTR" basu168 BSGatlas transcript 231288 233018 . + . ID=BSGatlas-transcript-212;color=#FF9900;Parent=BSGatlas-gene-281;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 231288 232967 . + . ID=BSGatlas-transcript-211;color=#FF9900;Parent=BSGatlas-gene-281;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 231288 231347 . + . ID=BSGatlas-5'UTR-118;Parent=BSGatlas-transcript-211,BSGatlas-transcript-212;comment="5'UTR" basu168 BSGatlas gene 231348 232967 . + . ID=BSGatlas-gene-281;color=#1E90FF;Name=aimA;locus_tag=BSU_02120,BSU02120 basu168 BSGatlas CDS 231348 232967 . + 0 ID=BSGatlas-gene-281_transcribed;color=#1E90FF;Name=aimA;Parent=BSGatlas-transcript-211,BSGatlas-transcript-212;comment="putative H+/amino acid transporter";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0015171 amino acid transmembrane transporter activity,GO:0015293 symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.8 Biosynthesis/ acquisition of serine/ glycine/ alanine,SW 2.3.2 Utilization of amino acids,SW 2.3.2.7 Utilization of alanine/ serine,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="aimA,ybeC";derives_from=BSGatlas-gene-281 basu168 BSGatlas transcript 232967 235483 . - . ID=BSGatlas-transcript-215;color=#B37924;Parent=BSGatlas-gene-283,BSGatlas-gene-282;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 232967 235401 . - . ID=BSGatlas-transcript-214;color=#B37924;Parent=BSGatlas-gene-283,BSGatlas-gene-282;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 232967 233928 . - . ID=BSGatlas-transcript-213;color=#B37924;Parent=BSGatlas-gene-282;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 232967 233013 . - . ID=BSGatlas-3'UTR-64;Parent=BSGatlas-transcript-213,BSGatlas-transcript-214,BSGatlas-transcript-215;comment="3'UTR" basu168 BSGatlas UTR 232968 233018 . + . ID=BSGatlas-3'UTR-65;Parent=BSGatlas-transcript-212;comment="3'UTR" basu168 BSGatlas gene 233014 233895 . - . ID=BSGatlas-gene-282;color=#3474B3;Name=glpQ;locus_tag=BSU_02130,BSU02130 basu168 BSGatlas CDS 233014 233895 . - 0 ID=BSGatlas-gene-282_transcribed;color=#3474B3;Name=glpQ;Parent=BSGatlas-transcript-213,BSGatlas-transcript-214,BSGatlas-transcript-215;comment="secreted glycerophosphoryl diesterphosphodiesterase";ec="3.1.4.46,EC-3.1.4.46";go="GO:0006071 glycerol metabolic process,GO:0006629 lipid metabolic process,GO:0008081 phosphoric diester hydrolase activity,GO:0008889 glycerophosphodiester phosphodiesterase activity,GO:0016787 hydrolase activity,GO:0046872 metal ion binding,GO:0070399 wall teichoic acid catabolic process";kegg_pathways="Glycerophospholipid metabolism (ko00564)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.3 Utilization of glycerol/ glycerol-3-phosphate,SW 2.4 Lipid metabolism,SW 2.4.1 Utilization of lipids,SW 2.4.1.1 Utilization of phospholipids,SW 2.6 Additional metabolic pathways,SW 2.6.3 Phosphate metabolism,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="glpQ,ybeD";derives_from=BSGatlas-gene-282 basu168 BSGatlas UTR 233896 233993 . - . ID=BSGatlas-internal_UTR-105;Parent=BSGatlas-transcript-214,BSGatlas-transcript-215;comment="internal_UTR" basu168 BSGatlas UTR 233896 233928 . - . ID=BSGatlas-5'UTR-119;Parent=BSGatlas-transcript-213;comment="5'UTR" basu168 BSGatlas transcript 233994 235483 . - . ID=BSGatlas-transcript-217;color=#B37924;Parent=BSGatlas-gene-283;comment="Based on: DBTBS" basu168 BSGatlas transcript 233994 235401 . - . ID=BSGatlas-transcript-216;color=#B37924;Parent=BSGatlas-gene-283;comment="Based on: DBTBS" basu168 BSGatlas gene 233994 235328 . - . ID=BSGatlas-gene-283;color=#3474B3;Name=glpT;locus_tag=BSU_02140,BSU02140 basu168 BSGatlas CDS 233994 235328 . - 0 ID=BSGatlas-gene-283_transcribed;color=#3474B3;Name=glpT;Parent=BSGatlas-transcript-214,BSGatlas-transcript-215,BSGatlas-transcript-216,BSGatlas-transcript-217;comment="sn-glycerol-3-phosphate permease";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006071 glycerol metabolic process,GO:0006810 transport,GO:0015169 glycerol-3-phosphate transmembrane transporter activity,GO:0015791 polyol transport,GO:0015794 glycerol-3-phosphate transmembrane transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034220 ion transmembrane transport,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.3 Carbohydrate transporter,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.3 Utilization of glycerol/ glycerol-3-phosphate,SW 2.4 Lipid metabolism,SW 2.4.1 Utilization of lipids,SW 2.4.1.1 Utilization of phospholipids,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="glpT,ybeE";derives_from=BSGatlas-gene-283 basu168 BSGatlas gene 234998 235624 . + . ID=BSGatlas-gene-284;color=#CC0000;Name=S81;locus_tag=new_234998_235624 basu168 BSGatlas transcript 234998 235624 . + . ID=BSGatlas-transcript-218;color=#FF9900;Parent=BSGatlas-gene-284;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 234998 235624 . + . ID=BSGatlas-gene-284_transcribed;color=#CC0000;Name=S81;Parent=BSGatlas-transcript-218;synonyms="S81";derives_from=BSGatlas-gene-284 basu168 BSGatlas UTR 235329 235483 . - . ID=BSGatlas-5'UTR-121;Parent=BSGatlas-transcript-215,BSGatlas-transcript-217;comment="5'UTR" basu168 BSGatlas UTR 235329 235401 . - . ID=BSGatlas-5'UTR-120;Parent=BSGatlas-transcript-214,BSGatlas-transcript-216;comment="5'UTR" basu168 BSGatlas gene 235390 235481 . - . ID=BSGatlas-gene-285;color=#6B6B6B;Name=glpP dependent leader basu168 BSGatlas transcript 235390 235481 . - . ID=BSGatlas-transcript-219;color=#B37924;Parent=BSGatlas-gene-285;comment="Based on: BSGatlas" basu168 BSGatlas riboswitch 235390 235481 . - . ID=BSGatlas-gene-285_transcribed;color=#6B6B6B;Name=glpP dependent leader;Parent=BSGatlas-transcript-219;derives_from=BSGatlas-gene-285 basu168 BSGatlas transcript 235625 238129 . + . ID=BSGatlas-transcript-220;color=#FF9900;Parent=BSGatlas-gene-286,BSGatlas-gene-287,BSGatlas-gene-288;comment="Based on: SubtiWiki" basu168 BSGatlas gene 235625 235873 . + . ID=BSGatlas-gene-286;color=#1E90FF;Name=ybeF;locus_tag=BSU_02150,BSU02150 basu168 BSGatlas CDS 235625 235873 . + 0 ID=BSGatlas-gene-286_transcribed;color=#1E90FF;Name=ybeF;Parent=BSGatlas-transcript-220;comment="conserved protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybeF";derives_from=BSGatlas-gene-286 basu168 BSGatlas UTR 235874 235964 . + . ID=BSGatlas-internal_UTR-106;Parent=BSGatlas-transcript-220;comment="internal_UTR" basu168 BSGatlas transcript 235904 238129 . + . ID=BSGatlas-transcript-221;color=#FF9900;Parent=BSGatlas-gene-287,BSGatlas-gene-288;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 235904 235964 . + . ID=BSGatlas-5'UTR-122;Parent=BSGatlas-transcript-221;comment="5'UTR" basu168 BSGatlas gene 235965 236882 . + . ID=BSGatlas-gene-287;color=#1E90FF;Name=ybfA;locus_tag=BSU_02160,BSU02160 basu168 BSGatlas CDS 235965 236882 . + 0 ID=BSGatlas-gene-287_transcribed;color=#1E90FF;Name=ybfA;Parent=BSGatlas-transcript-220,BSGatlas-transcript-221;comment="putative transcriptional regulator withacetyltransferase domain";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0008080 N-acetyltransferase activity,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybfA";derives_from=BSGatlas-gene-287 basu168 BSGatlas gene 236879 238129 . + . ID=BSGatlas-gene-288;color=#1E90FF;Name=ybfB;locus_tag=BSU_02170,BSU02170 basu168 BSGatlas CDS 236879 238129 . + 0 ID=BSGatlas-gene-288_transcribed;color=#1E90FF;Name=ybfB;Parent=BSGatlas-transcript-220,BSGatlas-transcript-221;comment="putative carboxylate transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ybfB";derives_from=BSGatlas-gene-288 basu168 BSGatlas transcript 238164 241889 . - . ID=BSGatlas-transcript-223;color=#B37924;Parent=BSGatlas-gene-292,BSGatlas-gene-291,BSGatlas-gene-290,BSGatlas-gene-289;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 238164 238569 . - . ID=BSGatlas-transcript-222;color=#B37924;Parent=BSGatlas-gene-290,BSGatlas-gene-289;comment="Based on: BSGatlas" basu168 BSGatlas gene 238164 238448 . - . ID=BSGatlas-gene-289;color=#3474B3;Name=ybfE;locus_tag=BSU_02180,BSU02180 basu168 BSGatlas CDS 238164 238448 . - 0 ID=BSGatlas-gene-289_transcribed;color=#3474B3;Name=ybfE;Parent=BSGatlas-transcript-222,BSGatlas-transcript-223;comment="conserved protein of unknown function(C-terminal end)";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ybfE";derives_from=BSGatlas-gene-289 basu168 BSGatlas gene 238354 238476 . - . ID=BSGatlas-gene-290;color=#3474B3;Name=ybfEn;locus_tag=BSU_02181 basu168 BSGatlas CDS 238354 238476 . - 0 ID=BSGatlas-gene-290_transcribed;color=#3474B3;Name=ybfEn;Parent=BSGatlas-transcript-222,BSGatlas-transcript-223;comment="conserved protein of unknown function YbfE(N-terminal fragment)";synonyms="NA,ybfEn";derives_from=BSGatlas-gene-290 basu168 BSGatlas UTR 238477 238643 . - . ID=BSGatlas-internal_UTR-107;Parent=BSGatlas-transcript-223;comment="internal_UTR" basu168 BSGatlas UTR 238477 238569 . - . ID=BSGatlas-5'UTR-123;Parent=BSGatlas-transcript-222;comment="5'UTR" basu168 BSGatlas gene 238644 239555 . - . ID=BSGatlas-gene-291;color=#3474B3;Name=ybfF;locus_tag=BSU_02190,BSU02190 basu168 BSGatlas CDS 238644 239555 . - 0 ID=BSGatlas-gene-291_transcribed;color=#3474B3;Name=ybfF;Parent=BSGatlas-transcript-223;comment="conserved protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ybfF";derives_from=BSGatlas-gene-291 basu168 BSGatlas UTR 239556 239643 . - . ID=BSGatlas-internal_UTR-108;Parent=BSGatlas-transcript-223;comment="internal_UTR" basu168 BSGatlas gene 239644 241842 . - . ID=BSGatlas-gene-292;color=#3474B3;Name=ybfG;locus_tag=BSU_02200,BSU02200 basu168 BSGatlas CDS 239644 241842 . - 0 ID=BSGatlas-gene-292_transcribed;color=#3474B3;Name=ybfG;Parent=BSGatlas-transcript-223;comment="putative pepdidoglycan binding protein";go="GO:0005886 plasma membrane,GO:0005975 carbohydrate metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.6 Cell wall/ other/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybfG";derives_from=BSGatlas-gene-292 basu168 BSGatlas UTR 241843 241889 . - . ID=BSGatlas-5'UTR-124;Parent=BSGatlas-transcript-223;comment="5'UTR" basu168 BSGatlas transcript 241917 243695 . - . ID=BSGatlas-transcript-224;color=#B37924;Parent=BSGatlas-gene-294,BSGatlas-gene-293;comment="Based on: SubtiWiki" basu168 BSGatlas gene 241917 242837 . - . ID=BSGatlas-gene-293;color=#3474B3;Name=ybfH;locus_tag=BSU_02210,BSU02210 basu168 BSGatlas CDS 241917 242837 . - 0 ID=BSGatlas-gene-293_transcribed;color=#3474B3;Name=ybfH;Parent=BSGatlas-transcript-224;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ybfH";derives_from=BSGatlas-gene-293 basu168 BSGatlas gene 242834 243661 . - . ID=BSGatlas-gene-294;color=#3474B3;Name=ybfI;locus_tag=BSU_02220,BSU02220 basu168 BSGatlas CDS 242834 243661 . - 0 ID=BSGatlas-gene-294_transcribed;color=#3474B3;Name=ybfI;Parent=BSGatlas-transcript-224;comment="putative transcriptional regulator (AraC/XylSfamily, cupin family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ybfI";derives_from=BSGatlas-gene-294 basu168 BSGatlas UTR 243662 243695 . - . ID=BSGatlas-5'UTR-125;Parent=BSGatlas-transcript-224;comment="5'UTR" basu168 BSGatlas transcript 243871 245095 . + . ID=BSGatlas-transcript-225;color=#FF9900;Parent=BSGatlas-gene-295;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 243871 243891 . + . ID=BSGatlas-5'UTR-126;Parent=BSGatlas-transcript-225;comment="5'UTR" basu168 BSGatlas gene 243892 245046 . + . ID=BSGatlas-gene-295;color=#1E90FF;Name=purT;locus_tag=BSU_02230,BSU02230 basu168 BSGatlas CDS 243892 245046 . + 0 ID=BSGatlas-gene-295_transcribed;color=#1E90FF;Name=purT;Parent=BSGatlas-transcript-225;comment="phosphoribosylglycinamide formyltransferase 2";ec="2.1.2.-,EC-2.1.2";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0003824 catalytic activity,GO:0004644 phosphoribosylglycinamide formyltransferase activity,GO:0005524 ATP binding,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0008152 metabolic process,GO:0009152 purine ribonucleotide biosynthetic process,GO:0016740 transferase activity,GO:0043815 phosphoribosylglycinamide formyltransferase 2 activity,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),One carbon pool by folate (ko00670),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purT";derives_from=BSGatlas-gene-295 basu168 BSGatlas UTR 245047 245095 . + . ID=BSGatlas-3'UTR-66;Parent=BSGatlas-transcript-225;comment="3'UTR" basu168 BSGatlas transcript 245121 246492 . + . ID=BSGatlas-transcript-227;color=#FF9900;Parent=BSGatlas-gene-296,BSGatlas-gene-297;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 245121 246131 . + . ID=BSGatlas-transcript-226;color=#FF9900;Parent=BSGatlas-gene-296;comment="Based on: BsubCyc" basu168 BSGatlas UTR 245121 245189 . + . ID=BSGatlas-5'UTR-127;Parent=BSGatlas-transcript-226,BSGatlas-transcript-227;comment="5'UTR" basu168 BSGatlas transcript 245190 246492 . + . ID=BSGatlas-transcript-229;color=#FF9900;Parent=BSGatlas-gene-296,BSGatlas-gene-297;comment="Based on: SubtiWiki" basu168 BSGatlas gene 245190 246131 . + . ID=BSGatlas-gene-296;color=#1E90FF;Name=mpr;locus_tag=BSU_02240,BSU02240 basu168 BSGatlas transcript 245190 246131 . + . ID=BSGatlas-transcript-228;color=#FF9900;Parent=BSGatlas-gene-296;comment="Based on: BsubCyc" basu168 BSGatlas CDS 245190 246131 . + 0 ID=BSGatlas-gene-296_transcribed;color=#1E90FF;Name=mpr;Parent=BSGatlas-transcript-226,BSGatlas-transcript-227,BSGatlas-transcript-228,BSGatlas-transcript-229;comment="extracellular glutamyl-endopeptidase";ec="3.4.21.-";go="GO:0003824 catalytic activity,GO:0004252 serine-type endopeptidase activity,GO:0005576 extracellular region,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008236 serine-type peptidase activity,GO:0016787 hydrolase activity";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.5 Utilization of proteins,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.7 Proteolysis,SW 3.3.7.2 Extracellular feeding proteases,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="mpr";derives_from=BSGatlas-gene-296 basu168 BSGatlas gene 246094 246492 . + . ID=BSGatlas-gene-297;color=#1E90FF;Name=ybfJ;locus_tag=BSU_02250,BSU02250 basu168 BSGatlas CDS 246094 246492 . + 0 ID=BSGatlas-gene-297_transcribed;color=#1E90FF;Name=ybfJ;Parent=BSGatlas-transcript-227,BSGatlas-transcript-229;comment="putative lipoprotein";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="ybfJ";derives_from=BSGatlas-gene-297 basu168 BSGatlas transcript 246583 249585 . + . ID=BSGatlas-transcript-231;color=#FF9900;Parent=BSGatlas-gene-298,BSGatlas-gene-299,BSGatlas-gene-300,BSGatlas-gene-301;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 246583 249540 . + . ID=BSGatlas-transcript-230;color=#FF9900;Parent=BSGatlas-gene-298,BSGatlas-gene-299,BSGatlas-gene-300,BSGatlas-gene-301;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 246583 246657 . + . ID=BSGatlas-5'UTR-128;Parent=BSGatlas-transcript-230,BSGatlas-transcript-231;comment="5'UTR" basu168 BSGatlas transcript 246658 249585 . + . ID=BSGatlas-transcript-233;color=#FF9900;Parent=BSGatlas-gene-298,BSGatlas-gene-299,BSGatlas-gene-300,BSGatlas-gene-301;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 246658 249540 . + . ID=BSGatlas-transcript-232;color=#FF9900;Parent=BSGatlas-gene-298,BSGatlas-gene-299,BSGatlas-gene-300,BSGatlas-gene-301;comment="Based on: SubtiWiki" basu168 BSGatlas gene 246658 247548 . + . ID=BSGatlas-gene-298;color=#1E90FF;Name=ybfK;locus_tag=BSU_02260,BSU02260 basu168 BSGatlas CDS 246658 247548 . + 0 ID=BSGatlas-gene-298_transcribed;color=#1E90FF;Name=ybfK;Parent=BSGatlas-transcript-230,BSGatlas-transcript-231,BSGatlas-transcript-232,BSGatlas-transcript-233;comment="enantioselective carboxylesterase";ec="3.1.1.1,EC-3.1.1.1";go="GO:0005737 cytoplasm,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0052689 carboxylic ester hydrolase activity";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.1 Utilization of lipids,SW 2.4.1.4 Utilization of lipids/ other";synonyms="cesB,ybfK";derives_from=BSGatlas-gene-298 basu168 BSGatlas UTR 247549 247743 . + . ID=BSGatlas-internal_UTR-109;Parent=BSGatlas-transcript-230,BSGatlas-transcript-231,BSGatlas-transcript-232,BSGatlas-transcript-233;comment="internal_UTR" basu168 BSGatlas transcript 247711 249585 . + . ID=BSGatlas-transcript-235;color=#FF9900;Parent=BSGatlas-gene-299,BSGatlas-gene-300,BSGatlas-gene-301;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas transcript 247711 249540 . + . ID=BSGatlas-transcript-234;color=#FF9900;Parent=BSGatlas-gene-299,BSGatlas-gene-300,BSGatlas-gene-301;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 247711 247743 . + . ID=BSGatlas-5'UTR-129;Parent=BSGatlas-transcript-234,BSGatlas-transcript-235;comment="5'UTR" basu168 BSGatlas gene 247744 248277 . + . ID=BSGatlas-gene-299;color=#1E90FF;Name=pssA;locus_tag=BSU_02270,BSU02270 basu168 BSGatlas CDS 247744 248277 . + 0 ID=BSGatlas-gene-299_transcribed;color=#1E90FF;Name=pssA;Parent=BSGatlas-transcript-230,BSGatlas-transcript-231,BSGatlas-transcript-232,BSGatlas-transcript-233,BSGatlas-transcript-234,BSGatlas-transcript-235;comment="phosphatidylserine synthase";ec="2.7.8.8,EC-2.7.8.8";go="GO:0003882 CDP-diacylglycerol-serine O-phosphatidyltransferase activity,GO:0005886 plasma membrane,GO:0006629 lipid metabolic process,GO:0008654 phospholipid biosynthetic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016740 transferase activity,GO:0016780 phosphotransferase activity, for other substituted phosphate groups";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Glycerophospholipid metabolism (ko00564),Glycine serine and threonine metabolism (ko00260),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.2 Biosynthesis of lipids,SW 2.4.2.2 Biosynthesis of phospholipids,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="pss,pssA";derives_from=BSGatlas-gene-299 basu168 BSGatlas gene 248268 248756 . + . ID=BSGatlas-gene-300;color=#1E90FF;Name=ybfM;locus_tag=BSU_02280,BSU02280 basu168 BSGatlas CDS 248268 248756 . + 0 ID=BSGatlas-gene-300_transcribed;color=#1E90FF;Name=ybfM;Parent=BSGatlas-transcript-230,BSGatlas-transcript-231,BSGatlas-transcript-232,BSGatlas-transcript-233,BSGatlas-transcript-234,BSGatlas-transcript-235;comment="putative membrane phosphatase";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ybfM";derives_from=BSGatlas-gene-300 basu168 BSGatlas gene 248749 249540 . + . ID=BSGatlas-gene-301;color=#1E90FF;Name=psd;locus_tag=BSU_02290,BSU02290 basu168 BSGatlas CDS 248749 249540 . + 0 ID=BSGatlas-gene-301_transcribed;color=#1E90FF;Name=psd;Parent=BSGatlas-transcript-230,BSGatlas-transcript-231,BSGatlas-transcript-232,BSGatlas-transcript-233,BSGatlas-transcript-234,BSGatlas-transcript-235;comment="phosphatidylserine decarboxylase; 32 kDaprecursor processed into a 29 kDa protein";ec="4.1.1.65,EC-4.1.1.65";go="GO:0004609 phosphatidylserine decarboxylase activity,GO:0005886 plasma membrane,GO:0006629 lipid metabolic process,GO:0006646 phosphatidylethanolamine biosynthetic process,GO:0008654 phospholipid biosynthetic process,GO:0016020 membrane,GO:0016829 lyase activity,GO:0016831 carboxy-lyase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Glycerophospholipid metabolism (ko00564),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.2 Biosynthesis of lipids,SW 2.4.2.2 Biosynthesis of phospholipids,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="psd";derives_from=BSGatlas-gene-301 basu168 BSGatlas UTR 249541 249585 . + . ID=BSGatlas-3'UTR-67;Parent=BSGatlas-transcript-231,BSGatlas-transcript-233,BSGatlas-transcript-235;comment="3'UTR" basu168 BSGatlas gene 249595 249873 . + . ID=BSGatlas-gene-302;color=#1E90FF;Name=ybfN;locus_tag=BSU_02300,BSU02300 basu168 BSGatlas CDS 249595 249873 . + 0 ID=BSGatlas-gene-302_transcribed;color=#1E90FF;Name=ybfN;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ybfN";derives_from=BSGatlas-gene-302 basu168 BSGatlas transcript 249934 253501 . + . ID=BSGatlas-transcript-238;color=#FF9900;Parent=BSGatlas-gene-303,BSGatlas-gene-304,BSGatlas-gene-305;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 249934 252314 . + . ID=BSGatlas-transcript-237;color=#FF9900;Parent=BSGatlas-gene-303,BSGatlas-gene-304;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 249934 251361 . + . ID=BSGatlas-transcript-236;color=#FF9900;Parent=BSGatlas-gene-303;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 249934 249978 . + . ID=BSGatlas-5'UTR-130;Parent=BSGatlas-transcript-236,BSGatlas-transcript-237,BSGatlas-transcript-238;comment="5'UTR" basu168 BSGatlas gene 249979 251319 . + . ID=BSGatlas-gene-303;color=#1E90FF;Name=ybfO;locus_tag=BSU_02310,BSU02310 basu168 BSGatlas CDS 249979 251319 . + 0 ID=BSGatlas-gene-303_transcribed;color=#1E90FF;Name=ybfO;Parent=BSGatlas-transcript-236,BSGatlas-transcript-237,BSGatlas-transcript-238;comment="putative exported hydrolase";ec="3.-.-.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0046677 response to antibiotic";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.11 Efp-dependent proteins,SW 6.12 Secreted proteins";synonyms="ybfO";derives_from=BSGatlas-gene-303 basu168 BSGatlas UTR 251320 251426 . + . ID=BSGatlas-internal_UTR-110;Parent=BSGatlas-transcript-237,BSGatlas-transcript-238;comment="internal_UTR" basu168 BSGatlas UTR 251320 251361 . + . ID=BSGatlas-3'UTR-68;Parent=BSGatlas-transcript-236;comment="3'UTR" basu168 BSGatlas transcript 251385 253501 . + . ID=BSGatlas-transcript-239;color=#FF9900;Parent=BSGatlas-gene-304,BSGatlas-gene-305;comment="Based on: BSGatlas" basu168 BSGatlas UTR 251385 251426 . + . ID=BSGatlas-5'UTR-131;Parent=BSGatlas-transcript-239;comment="5'UTR" basu168 BSGatlas gene 251427 252314 . + . ID=BSGatlas-gene-304;color=#1E90FF;Name=ybfP;locus_tag=BSU_02320,BSU02320 basu168 BSGatlas CDS 251427 252314 . + 0 ID=BSGatlas-gene-304_transcribed;color=#1E90FF;Name=ybfP;Parent=BSGatlas-transcript-237,BSGatlas-transcript-238,BSGatlas-transcript-239;comment="putative transcriptional regulator (AraC/XylSfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="ybfP";derives_from=BSGatlas-gene-304 basu168 BSGatlas UTR 252315 252513 . + . ID=BSGatlas-internal_UTR-111;Parent=BSGatlas-transcript-238,BSGatlas-transcript-239;comment="internal_UTR" basu168 BSGatlas transcript 252460 253501 . + . ID=BSGatlas-transcript-240;color=#FF9900;Parent=BSGatlas-gene-305;comment="Based on: BSGatlas" basu168 BSGatlas UTR 252460 252513 . + . ID=BSGatlas-5'UTR-132;Parent=BSGatlas-transcript-240;comment="5'UTR" basu168 BSGatlas gene 252514 253482 . + . ID=BSGatlas-gene-305;color=#1E90FF;Name=ybfQ;locus_tag=BSU_02330,BSU02330 basu168 BSGatlas CDS 252514 253482 . + 0 ID=BSGatlas-gene-305_transcribed;color=#1E90FF;Name=ybfQ;Parent=BSGatlas-transcript-238,BSGatlas-transcript-239,BSGatlas-transcript-240;comment="putative enzyme with rhodanese domain";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="ybfQ";derives_from=BSGatlas-gene-305 basu168 BSGatlas UTR 253483 253501 . + . ID=BSGatlas-3'UTR-69;Parent=BSGatlas-transcript-238,BSGatlas-transcript-239,BSGatlas-transcript-240;comment="3'UTR" basu168 BSGatlas transcript 253496 254849 . - . ID=BSGatlas-transcript-242;color=#B37924;Parent=BSGatlas-gene-306;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 253496 254805 . - . ID=BSGatlas-transcript-241;color=#B37924;Parent=BSGatlas-gene-306;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 253496 253517 . - . ID=BSGatlas-3'UTR-70;Parent=BSGatlas-transcript-241,BSGatlas-transcript-242;comment="3'UTR" basu168 BSGatlas gene 253518 254762 . - . ID=BSGatlas-gene-306;color=#3474B3;Name=gltP;locus_tag=BSU_02340,BSU02340 basu168 BSGatlas CDS 253518 254762 . - 0 ID=BSGatlas-gene-306_transcribed;color=#3474B3;Name=gltP;Parent=BSGatlas-transcript-241,BSGatlas-transcript-242;comment="proton/glutamate symport protein";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006835 dicarboxylic acid transport,GO:0015293 symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0017153 sodium:dicarboxylate symporter activity,GO:0035725 sodium ion transmembrane transport,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.6 Dicarboxylate/amino acid:cation symporter,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gltP";derives_from=BSGatlas-gene-306 basu168 BSGatlas UTR 254763 254849 . - . ID=BSGatlas-5'UTR-134;Parent=BSGatlas-transcript-242;comment="5'UTR" basu168 BSGatlas UTR 254763 254805 . - . ID=BSGatlas-5'UTR-133;Parent=BSGatlas-transcript-241;comment="5'UTR" basu168 BSGatlas transcript 254907 258596 . - . ID=BSGatlas-transcript-244;color=#B37924;Parent=BSGatlas-gene-308,BSGatlas-gene-307;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 254907 257635 . - . ID=BSGatlas-transcript-243;color=#B37924;Parent=BSGatlas-gene-308,BSGatlas-gene-307;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 254907 256802 . - . ID=BSGatlas-gene-307;color=#3474B3;Name=gamP;locus_tag=BSU_02350,BSU02350 basu168 BSGatlas CDS 254907 256802 . - 0 ID=BSGatlas-gene-307_transcribed;color=#3474B3;Name=gamP;Parent=BSGatlas-transcript-243,BSGatlas-transcript-244;comment="phosphotransferase system (PTS)glucosamine-specific enzyme IICBA component";ec="2.7.1.193,2.7.1.69";go="GO:0005351 carbohydrate:proton symporter activity,GO:0005355 glucose transmembrane transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015758 NA,GO:0015992 NA,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport,GO:0035428 NA";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Phosphotransferase system (PTS) (ko02060)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.17 Utilization of amino sugars,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.3 Utilization of amino sugars,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue,SW 6.4.4 Phosphorylation on a His residue";synonyms="gamP,ybfS,yzfA";derives_from=BSGatlas-gene-307 basu168 BSGatlas transcript 256685 258849 . + . ID=BSGatlas-transcript-245;color=#FF9900;Parent=BSGatlas-gene-309,BSGatlas-gene-310;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 256685 257790 . + . ID=BSGatlas-5'UTR-135;Parent=BSGatlas-transcript-245;comment="5'UTR" basu168 BSGatlas UTR 256803 256822 . - . ID=BSGatlas-internal_UTR-112;Parent=BSGatlas-transcript-243,BSGatlas-transcript-244;comment="internal_UTR" basu168 BSGatlas gene 256823 257572 . - . ID=BSGatlas-gene-308;color=#3474B3;Name=gamA;locus_tag=BSU_02360,BSU02360 basu168 BSGatlas CDS 256823 257572 . - 0 ID=BSGatlas-gene-308_transcribed;color=#3474B3;Name=gamA;Parent=BSGatlas-transcript-243,BSGatlas-transcript-244;comment="glucosamine-6-phosphate deaminase";ec="3.5.99.6,EC-3.5.99.6";go="GO:0004342 glucosamine-6-phosphate deaminase activity,GO:0005975 carbohydrate metabolic process,GO:0006043 glucosamine catabolic process,GO:0006044 N-acetylglucosamine metabolic process,GO:0006046 N-acetylglucosamine catabolic process,GO:0016787 hydrolase activity,GO:0019262 N-acetylneuraminate catabolic process";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.17 Utilization of amino sugars,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.3 Utilization of amino sugars";synonyms="gamA,nagBB,ybfT";derives_from=BSGatlas-gene-308 basu168 BSGatlas UTR 257573 258596 . - . ID=BSGatlas-5'UTR-138;Parent=BSGatlas-transcript-244;comment="5'UTR" basu168 BSGatlas UTR 257573 257635 . - . ID=BSGatlas-5'UTR-137;Parent=BSGatlas-transcript-243;comment="5'UTR" basu168 BSGatlas transcript 257750 258849 . + . ID=BSGatlas-transcript-247;color=#FF9900;Parent=BSGatlas-gene-309,BSGatlas-gene-310;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 257750 257790 . + . ID=BSGatlas-5'UTR-139;Parent=BSGatlas-transcript-247;comment="5'UTR" basu168 BSGatlas gene 257791 258498 . + . ID=BSGatlas-gene-309;color=#1E90FF;Name=gamR;locus_tag=BSU_02370,BSU02370 basu168 BSGatlas CDS 257791 258498 . + 0 ID=BSGatlas-gene-309_transcribed;color=#1E90FF;Name=gamR;Parent=BSGatlas-transcript-245,BSGatlas-transcript-247;comment="transcriptional regulator-GlcN6P (GntR family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0045892 negative regulation of transcription, DNA-templated";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.3 Utilization of cell wall components,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.17 Utilization of amino sugars,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.3 Utilization of amino sugars,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="gamR,ybgA";derives_from=BSGatlas-gene-309 basu168 BSGatlas transcript 258492 258849 . + . ID=BSGatlas-transcript-248;color=#FF9900;Parent=BSGatlas-gene-310;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 258492 258531 . + . ID=BSGatlas-5'UTR-140;Parent=BSGatlas-transcript-248;comment="5'UTR" basu168 BSGatlas UTR 258499 258531 . + . ID=BSGatlas-internal_UTR-113;Parent=BSGatlas-transcript-245,BSGatlas-transcript-247;comment="internal_UTR" basu168 BSGatlas gene 258532 258807 . + . ID=BSGatlas-gene-310;color=#1E90FF;Name=ybgB;locus_tag=BSU_02380,BSU02380 basu168 BSGatlas CDS 258532 258807 . + 0 ID=BSGatlas-gene-310_transcribed;color=#1E90FF;Name=ybgB;Parent=BSGatlas-transcript-245,BSGatlas-transcript-247,BSGatlas-transcript-248;comment="conserved protein of unknown function (B.subtilis-specific)";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.18 Toxins, antitoxins and immunity against toxins/ based on similarity,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ybgB";derives_from=BSGatlas-gene-310 basu168 BSGatlas UTR 258808 258849 . + . ID=BSGatlas-3'UTR-71;Parent=BSGatlas-transcript-245,BSGatlas-transcript-247,BSGatlas-transcript-248;comment="3'UTR" basu168 BSGatlas transcript 258889 260134 . + . ID=BSGatlas-transcript-249;color=#FF9900;Parent=BSGatlas-gene-311;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 258889 259015 . + . ID=BSGatlas-5'UTR-141;Parent=BSGatlas-transcript-249;comment="5'UTR" basu168 BSGatlas gene 259016 260086 . + . ID=BSGatlas-gene-311;color=#1E90FF;Name=ybgE;locus_tag=BSU_02390,BSU02390 basu168 BSGatlas CDS 259016 260086 . + 0 ID=BSGatlas-gene-311_transcribed;color=#1E90FF;Name=ybgE;Parent=BSGatlas-transcript-249;comment="isoleucine-valine aminotransferase / aromaticamino acid aminotransferase";ec="2.6.1.42,EC-2.6.1.6;EC-2.6.1.42;EC-2.6.1.42";go="GO:0003824 catalytic activity,GO:0004084 branched-chain-amino-acid transaminase activity,GO:0008152 metabolic process,GO:0008483 transaminase activity,GO:0008652 cellular amino acid biosynthetic process,GO:0009081 branched-chain amino acid metabolic process,GO:0009082 branched-chain amino acid biosynthetic process,GO:0009097 isoleucine biosynthetic process,GO:0009098 leucine biosynthetic process,GO:0009099 valine biosynthetic process,GO:0016740 transferase activity,GO:0052654 L-leucine transaminase activity,GO:0052655 L-valine transaminase activity,GO:0052656 L-isoleucine transaminase activity";kegg_pathways="2-Oxocarboxylic acid metabolism (ko01210),Biosynthesis of amino acids (ko01230),Biosynthesis of secondary metabolites (ko01110),Cysteine and methionine metabolism (ko00270),Metabolic pathways (ko01100),Pantothenate and CoA biosynthesis (ko00770),Valine leucine and isoleucine biosynthesis (ko00290),Valine leucine and isoleucine degradation (ko00280)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.12 Biosynthesis/ acquisition of branched-chain amino acids";synonyms="mtnF,ybgE";derives_from=BSGatlas-gene-311 basu168 BSGatlas UTR 260087 260134 . + . ID=BSGatlas-3'UTR-72;Parent=BSGatlas-transcript-249;comment="3'UTR" basu168 BSGatlas transcript 260123 262658 . - . ID=BSGatlas-transcript-251;color=#B37924;Parent=BSGatlas-gene-313,BSGatlas-gene-312;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 260123 261647 . - . ID=BSGatlas-transcript-250;color=#B37924;Parent=BSGatlas-gene-312;comment="Based on: SubtiWiki" basu168 BSGatlas gene 260123 261535 . - . ID=BSGatlas-gene-312;color=#3474B3;Name=ybgF;locus_tag=BSU_02400,BSU02400 basu168 BSGatlas CDS 260123 261535 . - 0 ID=BSGatlas-gene-312_transcribed;color=#3474B3;Name=ybgF;Parent=BSGatlas-transcript-250,BSGatlas-transcript-251;comment="putative aminoacid permease";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0015171 amino acid transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="hutM,ybgF";derives_from=BSGatlas-gene-312 basu168 BSGatlas UTR 261536 261655 . - . ID=BSGatlas-internal_UTR-114;Parent=BSGatlas-transcript-251;comment="internal_UTR" basu168 BSGatlas UTR 261536 261647 . - . ID=BSGatlas-5'UTR-142;Parent=BSGatlas-transcript-250;comment="5'UTR" basu168 BSGatlas transcript 261568 262658 . - . ID=BSGatlas-transcript-252;color=#B37924;Parent=BSGatlas-gene-313;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 261568 261655 . - . ID=BSGatlas-3'UTR-73;Parent=BSGatlas-transcript-252;comment="3'UTR" basu168 BSGatlas gene 261656 262603 . - . ID=BSGatlas-gene-313;color=#3474B3;Name=ybgG;locus_tag=BSU_02410,BSU02410 basu168 BSGatlas CDS 261656 262603 . - 0 ID=BSGatlas-gene-313_transcribed;color=#3474B3;Name=ybgG;Parent=BSGatlas-transcript-251,BSGatlas-transcript-252;comment="homocysteine methylase using (R,S)AdoMet";ec="2.1.1.10,EC-2.1.1;EC-2.1.1.10";go="GO:0008168 methyltransferase activity,GO:0008652 cellular amino acid biosynthetic process,GO:0008898 S-adenosylmethionine-homocysteine S-methyltransferase activity,GO:0009086 methionine biosynthetic process,GO:0016740 transferase activity,GO:0032259 methylation,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Cysteine and methionine metabolism (ko00270),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.11 Biosynthesis/ acquisition of methionine/ S-adenosylmethionine/ based on similarity";synonyms="ybgG";derives_from=BSGatlas-gene-313 basu168 BSGatlas UTR 262604 262658 . - . ID=BSGatlas-5'UTR-143;Parent=BSGatlas-transcript-251,BSGatlas-transcript-252;comment="5'UTR" basu168 BSGatlas transcript 262684 265269 . - . ID=BSGatlas-transcript-253;color=#B37924;Parent=BSGatlas-gene-315,BSGatlas-gene-314;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 262684 262731 . - . ID=BSGatlas-3'UTR-74;Parent=BSGatlas-transcript-253;comment="3'UTR" basu168 BSGatlas gene 262732 264168 . - . ID=BSGatlas-gene-314;color=#3474B3;Name=glnT;locus_tag=BSU_02420,BSU02420 basu168 BSGatlas CDS 262732 264168 . - 0 ID=BSGatlas-gene-314_transcribed;color=#3474B3;Name=glnT;Parent=BSGatlas-transcript-253;comment="glutamine transporter";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006814 sodium ion transport,GO:0006865 amino acid transport,GO:0015293 symporter activity,GO:0015655 alanine:sodium symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0032328 alanine transport,GO:0035725 sodium ion transmembrane transport,GO:0055085 transmembrane transport";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.1 Solute:sodium symporter family,SW 1.2.4.1.3 Alanine or glycine cation symporter family,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.1 Biosynthesis/ acquisition of glutamate/ glutamine/ ammonium assimilation,SW 2.3.2 Utilization of amino acids,SW 2.3.2.1 Utilization of glutamine/ glutamate,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="glnT,ybgH";derives_from=BSGatlas-gene-314 basu168 BSGatlas UTR 264169 264190 . - . ID=BSGatlas-internal_UTR-115;Parent=BSGatlas-transcript-253;comment="internal_UTR" basu168 BSGatlas gene 264191 265174 . - . ID=BSGatlas-gene-315;color=#3474B3;Name=glsA;locus_tag=BSU_02430,BSU02430 basu168 BSGatlas CDS 264191 265174 . - 0 ID=BSGatlas-gene-315_transcribed;color=#3474B3;Name=glsA;Parent=BSGatlas-transcript-253;comment="glutaminase";ec="3.5.1.2,EC-3.5.1.38;EC-3.5.1.2";go="GO:0004359 glutaminase activity,GO:0006541 glutamine metabolic process,GO:0016787 hydrolase activity";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Arginine biosynthesis (ko00220),D-Glutamine and D-glutamate metabolism (ko00471),Metabolic pathways (ko01100),Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.1 Utilization of glutamine/ glutamate";synonyms="glsA,ybgJ";derives_from=BSGatlas-gene-315 basu168 BSGatlas UTR 265175 265269 . - . ID=BSGatlas-5'UTR-144;Parent=BSGatlas-transcript-253;comment="5'UTR" basu168 BSGatlas transcript 265279 267663 . + . ID=BSGatlas-transcript-254;color=#FF9900;Parent=BSGatlas-gene-316,BSGatlas-gene-317;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 265279 265475 . + . ID=BSGatlas-5'UTR-145;Parent=BSGatlas-transcript-254;comment="5'UTR" basu168 BSGatlas gene 265476 266708 . + . ID=BSGatlas-gene-316;color=#1E90FF;Name=glnK;locus_tag=BSU_02440,BSU02440 basu168 BSGatlas CDS 265476 266708 . + 0 ID=BSGatlas-gene-316_transcribed;color=#1E90FF;Name=glnK;Parent=BSGatlas-transcript-254;comment="two-component sensor histidine kinase [GlnL] forglutamine degradation";ec="2.7.13.3";go="GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0005515 protein binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups,GO:0018106 peptidyl-histidine phosphorylation";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.1 Biosynthesis/ acquisition of glutamate/ glutamine/ ammonium assimilation,SW 2.3.2 Utilization of amino acids,SW 2.3.2.1 Utilization of glutamine/ glutamate,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="glnK,ycbA,yzgA";derives_from=BSGatlas-gene-316 basu168 BSGatlas gene 266719 267663 . + . ID=BSGatlas-gene-317;color=#1E90FF;Name=glnL;locus_tag=BSU_02450,BSU02450 basu168 BSGatlas CDS 266719 267663 . + 0 ID=BSGatlas-gene-317_transcribed;color=#1E90FF;Name=glnL;Parent=BSGatlas-transcript-254;comment="two-component response regulator [GlnJ] forglutamine utilisation";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.1 Biosynthesis/ acquisition of glutamate/ glutamine/ ammonium assimilation,SW 2.3.2 Utilization of amino acids,SW 2.3.2.1 Utilization of glutamine/ glutamate,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="glnL,ycbB,yzgB";derives_from=BSGatlas-gene-317 basu168 BSGatlas transcript 267772 276758 . + . ID=BSGatlas-transcript-256;color=#FF9900;Parent=BSGatlas-gene-318,BSGatlas-gene-319,BSGatlas-gene-320,BSGatlas-gene-321,BSGatlas-gene-322,BSGatlas-gene-323,BSGatlas-gene-325;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 267772 273954 . + . ID=BSGatlas-transcript-255;color=#FF9900;Parent=BSGatlas-gene-318,BSGatlas-gene-319,BSGatlas-gene-320,BSGatlas-gene-321,BSGatlas-gene-322;comment="Based on: BSGatlas" basu168 BSGatlas transcript 267772 273938 . + . ID=BSGatlas-transcript-4855;color=#FF9900;Parent=BSGatlas-gene-318,BSGatlas-gene-319,BSGatlas-gene-320,BSGatlas-gene-321,BSGatlas-gene-322;comment="Based on: BSGatlas" basu168 BSGatlas UTR 267772 267889 . + . ID=BSGatlas-5'UTR-146;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="5'UTR" basu168 BSGatlas gene 267890 268816 . + . ID=BSGatlas-gene-318;color=#1E90FF;Name=ycbC;locus_tag=BSU_02460,BSU02460 basu168 BSGatlas CDS 267890 268816 . + 0 ID=BSGatlas-gene-318_transcribed;color=#1E90FF;Name=ycbC;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="5-dehydro-4-deoxyglucarate dehydratase";ec="4.2.1.41,EC-4.2.1.41";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016052 carbohydrate catabolic process,GO:0016829 lyase activity,GO:0019394 glucarate catabolic process,GO:0042838 D-glucarate catabolic process,GO:0047448 5-dehydro-4-deoxyglucarate dehydratase activity";kegg_pathways="Ascorbate and aldarate metabolism (ko00053),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.14 Utilization of glucarate/galactarate";synonyms="ycbC";derives_from=BSGatlas-gene-318 basu168 BSGatlas UTR 268817 268845 . + . ID=BSGatlas-internal_UTR-116;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="internal_UTR" basu168 BSGatlas gene 268846 270312 . + . ID=BSGatlas-gene-319;color=#1E90FF;Name=ycbD;locus_tag=BSU_02470,BSU02470 basu168 BSGatlas CDS 268846 270312 . + 0 ID=BSGatlas-gene-319_transcribed;color=#1E90FF;Name=ycbD;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="2,5-dioxovalerate dehydrogenase(alpha-ketoglutaric semialdehyde dehydrogenase)";ec="1.2.1.26,1.2.1.3,EC-1.2.1";go="GO:0004029 aldehyde dehydrogenase (NAD) activity,GO:0006068 ethanol catabolic process,GO:0016491 oxidoreductase activity,GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Pentose and glucuronate interconversions (ko00040)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.14 Utilization of glucarate/galactarate";synonyms="ycbD";derives_from=BSGatlas-gene-319 basu168 BSGatlas UTR 270313 270395 . + . ID=BSGatlas-internal_UTR-117;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="internal_UTR" basu168 BSGatlas gene 270396 271763 . + . ID=BSGatlas-gene-320;color=#1E90FF;Name=ycbE;locus_tag=BSU_02480,BSU02480 basu168 BSGatlas CDS 270396 271763 . + 0 ID=BSGatlas-gene-320_transcribed;color=#1E90FF;Name=ycbE;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="glucarate transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.3 Carbohydrate transporter,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.14 Utilization of glucarate/galactarate,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gudP,ycbE";derives_from=BSGatlas-gene-320 basu168 BSGatlas UTR 271764 271799 . + . ID=BSGatlas-internal_UTR-118;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="internal_UTR" basu168 BSGatlas gene 271800 273167 . + . ID=BSGatlas-gene-321;color=#1E90FF;Name=ycbF;locus_tag=BSU_02490,BSU02490 basu168 BSGatlas CDS 271800 273167 . + 0 ID=BSGatlas-gene-321_transcribed;color=#1E90FF;Name=ycbF;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="glucarate dehydratase";ec="4.2.1.40,EC-4.2.1.40";go="GO:0000287 magnesium ion binding,GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0008872 glucarate dehydratase activity,GO:0016829 lyase activity,GO:0019394 glucarate catabolic process,GO:0042838 D-glucarate catabolic process,GO:0046872 metal ion binding";kegg_pathways="Ascorbate and aldarate metabolism (ko00053),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.14 Utilization of glucarate/galactarate";synonyms="gudD,ycbF";derives_from=BSGatlas-gene-321 basu168 BSGatlas UTR 273168 273236 . + . ID=BSGatlas-internal_UTR-119;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256;comment="internal_UTR" basu168 BSGatlas transcript 273206 273954 . + . ID=BSGatlas-transcript-257;color=#FF9900;Parent=BSGatlas-gene-322;comment="Based on: BSGatlas" basu168 BSGatlas transcript 273206 273938 . + . ID=BSGatlas-transcript-4856;color=#FF9900;Parent=BSGatlas-gene-322;comment="Based on: BSGatlas" basu168 BSGatlas UTR 273206 273236 . + . ID=BSGatlas-5'UTR-147;Parent=BSGatlas-transcript-4856,BSGatlas-transcript-257;comment="5'UTR" basu168 BSGatlas gene 273237 273938 . + . ID=BSGatlas-gene-322;color=#1E90FF;Name=ycbG;locus_tag=BSU_02500,BSU02500 basu168 BSGatlas CDS 273237 273938 . + 0 ID=BSGatlas-gene-322_transcribed;color=#1E90FF;Name=ycbG;Parent=BSGatlas-transcript-4855,BSGatlas-transcript-255,BSGatlas-transcript-256,BSGatlas-transcript-4856,BSGatlas-transcript-257;comment="transcriptional regulator (GntR family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.14 Utilization of glucarate/galactarate,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="ycbG";derives_from=BSGatlas-gene-322 basu168 BSGatlas UTR 273939 274028 . + . ID=BSGatlas-internal_UTR-120;Parent=BSGatlas-transcript-256;comment="internal_UTR" basu168 BSGatlas UTR 273939 273954 . + . ID=BSGatlas-3'UTR-75;Parent=BSGatlas-transcript-255,BSGatlas-transcript-257;comment="3'UTR" basu168 BSGatlas gene 274029 275561 . + . ID=BSGatlas-gene-323;color=#1E90FF;Name=ycbH;locus_tag=BSU_02510,BSU02510 basu168 BSGatlas CDS 274029 275561 . + 0 ID=BSGatlas-gene-323_transcribed;color=#1E90FF;Name=ycbH;Parent=BSGatlas-transcript-256;comment="D-galactarate dehydratase";ec="4.2.1.42,EC-4.2.1.42";go="GO:0008867 galactarate dehydratase activity,GO:0016829 lyase activity,GO:0016836 hydro-lyase activity,GO:0046392 galactarate catabolic process";kegg_pathways="Ascorbate and aldarate metabolism (ko00053),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.14 Utilization of glucarate/galactarate";synonyms="garD,ycbH";derives_from=BSGatlas-gene-323 basu168 BSGatlas UTR 275562 275837 . + . ID=BSGatlas-internal_UTR-1127;Parent=BSGatlas-transcript-256;comment="internal_UTR" basu168 BSGatlas UTR 275603 275837 . + . ID=BSGatlas-5'UTR-2842;comment="5'UTR" basu168 BSGatlas gene 275838 276758 . + . ID=BSGatlas-gene-325;color=#1E90FF;Name=ycbJ;locus_tag=BSU_02520,BSU02520 basu168 BSGatlas CDS 275838 276758 . + 0 ID=BSGatlas-gene-325_transcribed;color=#1E90FF;Name=ycbJ;Parent=BSGatlas-transcript-256;comment="putative phosphotransferase";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity";synonyms="ycbJ";derives_from=BSGatlas-gene-325 basu168 BSGatlas transcript 276798 278348 . + . ID=BSGatlas-transcript-259;color=#FF9900;Parent=BSGatlas-gene-327,BSGatlas-gene-328;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 276798 277408 . + . ID=BSGatlas-transcript-258;color=#FF9900;Parent=BSGatlas-gene-327;comment="Based on: BSGatlas" basu168 BSGatlas UTR 276798 277159 . + . ID=BSGatlas-5'UTR-148;Parent=BSGatlas-transcript-258,BSGatlas-transcript-259;comment="5'UTR" basu168 BSGatlas transcript 276814 277089 . + . ID=BSGatlas-transcript-260;color=#FF9900;Parent=BSGatlas-gene-326;comment="Based on: BSGatlas" basu168 BSGatlas gene 276814 277062 . + . ID=BSGatlas-gene-326;color=#999999;Name=T-box_tboW;locus_tag=BSU_misc_RNA_6,BSU_MISC_RNA_6 basu168 BSGatlas riboswitch 276814 277062 . + . ID=BSGatlas-gene-326_transcribed;color=#999999;Name=T-box_tboW;Parent=BSGatlas-transcript-260;comment="T-box riboswitch specific of tryptophan tRNAligase";synonyms="BSU_misc_RNA_6";derives_from=BSGatlas-gene-326 basu168 BSGatlas UTR 277063 277089 . + . ID=BSGatlas-3'UTR-76;Parent=BSGatlas-transcript-260;comment="3'UTR" basu168 BSGatlas gene 277160 277321 . + . ID=BSGatlas-gene-327;color=#1E90FF;Name=rtpA;locus_tag=BSU_02530,BSU02530 basu168 BSGatlas CDS 277160 277321 . + 0 ID=BSGatlas-gene-327_transcribed;color=#1E90FF;Name=rtpA;Parent=BSGatlas-transcript-258,BSGatlas-transcript-259;comment="anti-TRAP regulator";go="GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0031072 heat shock protein binding,GO:0051082 unfolded protein binding";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.13 Biosynthesis/ acquisition of aromatic amino acids,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.7 Control of transcription factor (other than two-component system)";synonyms="rtpA,yczA";derives_from=BSGatlas-gene-327 basu168 BSGatlas transcript 277298 278348 . + . ID=BSGatlas-transcript-261;color=#FF9900;Parent=BSGatlas-gene-328;comment="Based on: BSGatlas" basu168 BSGatlas UTR 277298 277341 . + . ID=BSGatlas-5'UTR-149;Parent=BSGatlas-transcript-261;comment="5'UTR" basu168 BSGatlas UTR 277322 277408 . + . ID=BSGatlas-3'UTR-77;Parent=BSGatlas-transcript-258;comment="3'UTR" basu168 BSGatlas UTR 277322 277341 . + . ID=BSGatlas-internal_UTR-123;Parent=BSGatlas-transcript-259;comment="internal_UTR" basu168 BSGatlas gene 277342 278280 . + . ID=BSGatlas-gene-328;color=#1E90FF;Name=ycbK;locus_tag=BSU_02540,BSU02540 basu168 BSGatlas CDS 277342 278280 . + 0 ID=BSGatlas-gene-328_transcribed;color=#1E90FF;Name=ycbK;Parent=BSGatlas-transcript-259,BSGatlas-transcript-261;comment="putative tryptophan or indole exporter";go="GO:0000303 response to superoxide,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0042542 response to hydrogen peroxide";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycbK";derives_from=BSGatlas-gene-328 basu168 BSGatlas UTR 278281 278348 . + . ID=BSGatlas-3'UTR-78;Parent=BSGatlas-transcript-259,BSGatlas-transcript-261;comment="3'UTR" basu168 BSGatlas transcript 278308 281731 . + . ID=BSGatlas-transcript-263;color=#FF9900;Parent=BSGatlas-gene-329,BSGatlas-gene-330,BSGatlas-gene-331,BSGatlas-gene-332;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 278308 279994 . + . ID=BSGatlas-transcript-262;color=#FF9900;Parent=BSGatlas-gene-329,BSGatlas-gene-330;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 278308 278376 . + . ID=BSGatlas-5'UTR-150;Parent=BSGatlas-transcript-262,BSGatlas-transcript-263;comment="5'UTR" basu168 BSGatlas gene 278377 279057 . + . ID=BSGatlas-gene-329;color=#1E90FF;Name=ycbL;locus_tag=BSU_02550,BSU02550 basu168 BSGatlas CDS 278377 279057 . + 0 ID=BSGatlas-gene-329_transcribed;color=#1E90FF;Name=ycbL;Parent=BSGatlas-transcript-262,BSGatlas-transcript-263;comment="two-component response regulator [YcbM]";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="ycbL";derives_from=BSGatlas-gene-329 basu168 BSGatlas gene 279059 279994 . + . ID=BSGatlas-gene-330;color=#1E90FF;Name=ycbM;locus_tag=BSU_02560,BSU02560 basu168 BSGatlas CDS 279059 279994 . + 0 ID=BSGatlas-gene-330_transcribed;color=#1E90FF;Name=ycbM;Parent=BSGatlas-transcript-262,BSGatlas-transcript-263;comment="two-component sensor histidine kinase [YcbL]";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0004871 NA,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="ycbM";derives_from=BSGatlas-gene-330 basu168 BSGatlas UTR 279995 280085 . + . ID=BSGatlas-internal_UTR-124;Parent=BSGatlas-transcript-263;comment="internal_UTR" basu168 BSGatlas gene 280086 281009 . + . ID=BSGatlas-gene-331;color=#1E90FF;Name=ycbN;locus_tag=BSU_02570,BSU02570 basu168 BSGatlas CDS 280086 281009 . + 0 ID=BSGatlas-gene-331_transcribed;color=#1E90FF;Name=ycbN;Parent=BSGatlas-transcript-263;comment="putative ABC efflux transporter (ATP-bindingprotein)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.6 Exporters of unknown function";synonyms="ycbN";derives_from=BSGatlas-gene-331 basu168 BSGatlas UTR 281010 281027 . + . ID=BSGatlas-internal_UTR-125;Parent=BSGatlas-transcript-263;comment="internal_UTR" basu168 BSGatlas gene 281028 281714 . + . ID=BSGatlas-gene-332;color=#1E90FF;Name=ycbO;locus_tag=BSU_02580,BSU02580 basu168 BSGatlas CDS 281028 281714 . + 0 ID=BSGatlas-gene-332_transcribed;color=#1E90FF;Name=ycbO;Parent=BSGatlas-transcript-263;comment="putative Na+-driven exporter";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ycbO";derives_from=BSGatlas-gene-332 basu168 BSGatlas gene 281675 281809 . - . ID=BSGatlas-gene-333;color=#3474B3;locus_tag=BSU_02585 basu168 BSGatlas CDS 281675 281809 . - 0 ID=BSGatlas-gene-333_transcribed;color=#3474B3;comment="hypothetical protein";synonyms="BSU_02585,NA";derives_from=BSGatlas-gene-333 basu168 BSGatlas UTR 281715 281731 . + . ID=BSGatlas-3'UTR-80;Parent=BSGatlas-transcript-263;comment="3'UTR" basu168 BSGatlas transcript 281769 283231 . - . ID=BSGatlas-transcript-267;color=#B37924;Parent=BSGatlas-gene-334;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 281769 282445 . - . ID=BSGatlas-transcript-266;color=#B37924;Parent=BSGatlas-gene-334;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 281769 282200 . - . ID=BSGatlas-transcript-265;color=#B37924;Parent=BSGatlas-gene-334;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 281769 282155 . - . ID=BSGatlas-gene-334;color=#3474B3;Name=ycbP;locus_tag=BSU_02590,BSU02590 basu168 BSGatlas CDS 281769 282155 . - 0 ID=BSGatlas-gene-334_transcribed;color=#3474B3;Name=ycbP;Parent=BSGatlas-transcript-265,BSGatlas-transcript-266,BSGatlas-transcript-267;comment="putative inner integral membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycbP";derives_from=BSGatlas-gene-334 basu168 BSGatlas UTR 282156 283231 . - . ID=BSGatlas-5'UTR-153;Parent=BSGatlas-transcript-267;comment="5'UTR" basu168 BSGatlas UTR 282156 282445 . - . ID=BSGatlas-5'UTR-152;Parent=BSGatlas-transcript-266;comment="5'UTR" basu168 BSGatlas UTR 282156 282200 . - . ID=BSGatlas-5'UTR-151;Parent=BSGatlas-transcript-265;comment="5'UTR" basu168 BSGatlas transcript 282446 282941 . + . ID=BSGatlas-transcript-270;color=#FF9900;Parent=BSGatlas-gene-335;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 282446 282897 . + . ID=BSGatlas-transcript-269;color=#FF9900;Parent=BSGatlas-gene-335;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 282446 282468 . + . ID=BSGatlas-5'UTR-155;Parent=BSGatlas-transcript-269,BSGatlas-transcript-270;comment="5'UTR" basu168 BSGatlas gene 282469 282897 . + . ID=BSGatlas-gene-335;color=#1E90FF;Name=cwlJ;locus_tag=BSU_02600,BSU02600 basu168 BSGatlas CDS 282469 282897 . + 0 ID=BSGatlas-gene-335_transcribed;color=#1E90FF;Name=cwlJ;Parent=BSGatlas-transcript-269,BSGatlas-transcript-270;comment="spore cortex cell wall hydrolase";go="GO:0005576 extracellular region,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.5 Cell wall/ other,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.3 Class III,SW 4.2.4 Germination,SW 4.2.4.2 Additional germination proteins";synonyms="cwlJ,ycbQ";derives_from=BSGatlas-gene-335 basu168 BSGatlas UTR 282898 282941 . + . ID=BSGatlas-3'UTR-81;Parent=BSGatlas-transcript-270;comment="3'UTR" basu168 BSGatlas transcript 282963 283776 . + . ID=BSGatlas-transcript-272;color=#FF9900;Parent=BSGatlas-gene-336;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 282963 283734 . + . ID=BSGatlas-transcript-271;color=#FF9900;Parent=BSGatlas-gene-336;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 282963 283002 . + . ID=BSGatlas-5'UTR-156;Parent=BSGatlas-transcript-271,BSGatlas-transcript-272;comment="5'UTR" basu168 BSGatlas gene 283003 283734 . + . ID=BSGatlas-gene-336;color=#1E90FF;Name=ycbR;locus_tag=BSU_02610,BSU02610 basu168 BSGatlas CDS 283003 283734 . + 0 ID=BSGatlas-gene-336_transcribed;color=#1E90FF;Name=ycbR;Parent=BSGatlas-transcript-271,BSGatlas-transcript-272;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.12 Resistance against toxic metals/ based on similarity";synonyms="ycbR";derives_from=BSGatlas-gene-336 basu168 BSGatlas UTR 283735 283776 . + . ID=BSGatlas-3'UTR-82;Parent=BSGatlas-transcript-272;comment="3'UTR" basu168 BSGatlas gene 283816 283992 . + . ID=BSGatlas-gene-337;color=#1E90FF;Name=yczK;locus_tag=BSU_02619,BSU02619 basu168 BSGatlas CDS 283816 283992 . + 0 ID=BSGatlas-gene-337_transcribed;color=#1E90FF;Name=yczK;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yczK";derives_from=BSGatlas-gene-337 basu168 BSGatlas transcript 283984 286776 . + . ID=BSGatlas-transcript-274;color=#FF9900;Parent=BSGatlas-gene-338,BSGatlas-gene-339,BSGatlas-gene-340;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 283984 285762 . + . ID=BSGatlas-transcript-273;color=#FF9900;Parent=BSGatlas-gene-338;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 283984 284010 . + . ID=BSGatlas-5'UTR-157;Parent=BSGatlas-transcript-273,BSGatlas-transcript-274;comment="5'UTR" basu168 BSGatlas gene 284011 285762 . + . ID=BSGatlas-gene-338;color=#1E90FF;Name=phoD;locus_tag=BSU_02620,BSU02620 basu168 BSGatlas CDS 284011 285762 . + 0 ID=BSGatlas-gene-338_transcribed;color=#1E90FF;Name=phoD;Parent=BSGatlas-transcript-273,BSGatlas-transcript-274;comment="secreted phosphodiesterase (endo-hydrolysis atnon-specific sites throughout the cell wall teichoic acidpolymer)";ec="3.1.3.1,3.1.4.46,EC-3.1.3.1";go="GO:0004035 alkaline phosphatase activity,GO:0005509 calcium ion binding,GO:0006950 response to stress,GO:0008152 metabolic process,GO:0008199 ferric iron binding,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity,GO:0070399 wall teichoic acid catabolic process";kegg_pathways="Folate biosynthesis (ko00790),Metabolic pathways (ko01100),Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.3 Phosphate metabolism,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="phoD,ycbS";derives_from=BSGatlas-gene-338 basu168 BSGatlas gene 285775 285987 . + . ID=BSGatlas-gene-339;color=#1E90FF;Name=tatAD;locus_tag=BSU_02630,BSU02630 basu168 BSGatlas CDS 285775 285987 . + 0 ID=BSGatlas-gene-339_transcribed;color=#1E90FF;Name=tatAD;Parent=BSGatlas-transcript-274;comment="component of the twin-arginine pre-proteintranslocation pathway";go="GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0005886 plasma membrane,GO:0005887 integral component of plasma membrane,GO:0006810 transport,GO:0008320 protein transmembrane transporter activity,GO:0008565 protein transporter activity,GO:0009306 protein secretion,GO:0015031 protein transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0033281 TAT protein transport complex,GO:0043953 protein transport by the Tat complex";kegg_pathways="Bacterial secretion system (ko03070),Protein export (ko03060)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.3 Phosphate metabolism,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tatAD,yczB";derives_from=BSGatlas-gene-339 basu168 BSGatlas UTR 285988 286047 . + . ID=BSGatlas-internal_UTR-126;Parent=BSGatlas-transcript-274;comment="internal_UTR" basu168 BSGatlas gene 286048 286776 . + . ID=BSGatlas-gene-340;color=#1E90FF;Name=tatCD;locus_tag=BSU_02640,BSU02640 basu168 BSGatlas CDS 286048 286776 . + 0 ID=BSGatlas-gene-340_transcribed;color=#1E90FF;Name=tatCD;Parent=BSGatlas-transcript-274;comment="component of the twin-arginine pre-proteintranslocation pathway";go="GO:0005886 plasma membrane,GO:0005887 integral component of plasma membrane,GO:0006810 transport,GO:0008320 protein transmembrane transporter activity,GO:0015031 protein transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0033281 TAT protein transport complex,GO:0043953 protein transport by the Tat complex";kegg_pathways="Bacterial secretion system (ko03070),Protein export (ko03060)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.3 Phosphate metabolism,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tatCD,ycbT";derives_from=BSGatlas-gene-340 basu168 BSGatlas transcript 286773 287449 . - . ID=BSGatlas-transcript-4859;color=#B37924;Parent=BSGatlas-gene-341;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 286773 287420 . - . ID=BSGatlas-gene-341;color=#3474B3;Name=pcp;locus_tag=BSU_02650,BSU02650 basu168 BSGatlas CDS 286773 287420 . - 0 ID=BSGatlas-gene-341_transcribed;color=#3474B3;Name=pcp;Parent=BSGatlas-transcript-4859;comment="pyrrolidone-carboxylate (pyroglutamate)peptidase";ec="3.4.11.8,3.4.19.3,EC-3.4.19.3";go="GO:0005737 cytoplasm,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008234 cysteine-type peptidase activity,GO:0016787 hydrolase activity,GO:0016920 pyroglutamyl-peptidase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.8 Protein modification/ other";synonyms="pcp";derives_from=BSGatlas-gene-341 basu168 BSGatlas UTR 287421 287449 . - . ID=BSGatlas-5'UTR-158;Parent=BSGatlas-transcript-4859;comment="5'UTR" basu168 BSGatlas transcript 287471 288659 . + . ID=BSGatlas-transcript-277;color=#FF9900;Parent=BSGatlas-gene-342;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 287471 287498 . + . ID=BSGatlas-5'UTR-160;Parent=BSGatlas-transcript-277;comment="5'UTR" basu168 BSGatlas gene 287499 288611 . + . ID=BSGatlas-gene-342;color=#1E90FF;Name=ycbU;locus_tag=BSU_02660,BSU02660 basu168 BSGatlas CDS 287499 288611 . + 0 ID=BSGatlas-gene-342_transcribed;color=#1E90FF;Name=ycbU;Parent=BSGatlas-transcript-277;comment="putative lyase (PLP-dependent)";ec="EC-2.8.1.7";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0008483 transaminase activity,GO:0016740 transferase activity,GO:0030170 pyridoxal phosphate binding";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ycbU";derives_from=BSGatlas-gene-342 basu168 BSGatlas transcript 288607 290740 . - . ID=BSGatlas-transcript-278;color=#B37924;Parent=BSGatlas-gene-344,BSGatlas-gene-343;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 288607 288652 . - . ID=BSGatlas-3'UTR-84;Parent=BSGatlas-transcript-278;comment="3'UTR" basu168 BSGatlas UTR 288612 288659 . + . ID=BSGatlas-3'UTR-85;Parent=BSGatlas-transcript-277;comment="3'UTR" basu168 BSGatlas gene 288653 290092 . - . ID=BSGatlas-gene-343;color=#3474B3;Name=lmrB;locus_tag=BSU_02670,BSU02670 basu168 BSGatlas CDS 288653 290092 . - 0 ID=BSGatlas-gene-343_transcribed;color=#3474B3;Name=lmrB;Parent=BSGatlas-transcript-278;comment="flavonoid efflux transporter; drug-exportprotein";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0046677 response to antibiotic,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lmrB,yccA";derives_from=BSGatlas-gene-343 basu168 BSGatlas UTR 290093 290131 . - . ID=BSGatlas-internal_UTR-127;Parent=BSGatlas-transcript-278;comment="internal_UTR" basu168 BSGatlas gene 290132 290698 . - . ID=BSGatlas-gene-344;color=#3474B3;Name=lmrA;locus_tag=BSU_02680,BSU02680 basu168 BSGatlas CDS 290132 290698 . - 0 ID=BSGatlas-gene-344_transcribed;color=#3474B3;Name=lmrA;Parent=BSGatlas-transcript-278;comment="transcriptional repressor of lmrAB and yxaGHoperons (flavonoid and antibiotic resistance)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics";synonyms="lin-2,lmrA,yccB";derives_from=BSGatlas-gene-344 basu168 BSGatlas UTR 290699 290740 . - . ID=BSGatlas-5'UTR-161;Parent=BSGatlas-transcript-278;comment="5'UTR" basu168 BSGatlas transcript 290888 292081 . + . ID=BSGatlas-transcript-280;color=#FF9900;Parent=BSGatlas-gene-345;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 290888 292042 . + . ID=BSGatlas-transcript-279;color=#FF9900;Parent=BSGatlas-gene-345;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 290888 290914 . + . ID=BSGatlas-5'UTR-162;Parent=BSGatlas-transcript-279,BSGatlas-transcript-280;comment="5'UTR" basu168 BSGatlas gene 290915 292042 . + . ID=BSGatlas-gene-345;color=#1E90FF;Name=ansZ;locus_tag=BSU_02690,BSU02690 basu168 BSGatlas CDS 290915 292042 . + 0 ID=BSGatlas-gene-345_transcribed;color=#1E90FF;Name=ansZ;Parent=BSGatlas-transcript-279,BSGatlas-transcript-280;comment="L-asparaginase 2 (putative lipoprotein)";ec="3.5.1.1";go="GO:0004067 asparaginase activity,GO:0006520 cellular amino acid metabolic process,GO:0006528 asparagine metabolic process,GO:0016787 hydrolase activity";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Biosynthesis of secondary metabolites (ko01110),Cyanoamino acid metabolism (ko00460),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.6 Utilization of asparagine/ aspartate";synonyms="ansZ,yccC";derives_from=BSGatlas-gene-345 basu168 BSGatlas UTR 292043 292081 . + . ID=BSGatlas-3'UTR-86;Parent=BSGatlas-transcript-280;comment="3'UTR" basu168 BSGatlas transcript 292159 292895 . + . ID=BSGatlas-transcript-281;color=#FF9900;Parent=BSGatlas-gene-346;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 292159 292204 . + . ID=BSGatlas-5'UTR-163;Parent=BSGatlas-transcript-281;comment="5'UTR" basu168 BSGatlas gene 292205 292843 . + . ID=BSGatlas-gene-346;color=#1E90FF;Name=lip;locus_tag=BSU_02700,BSU02700 basu168 BSGatlas CDS 292205 292843 . + 0 ID=BSGatlas-gene-346_transcribed;color=#1E90FF;Name=lip;Parent=BSGatlas-transcript-281;comment="secreted alkaliphilic lipase";ec="3.1.1.3,EC-3.1.1.3";go="GO:0004806 triglyceride lipase activity,GO:0005576 extracellular region,GO:0006629 lipid metabolic process,GO:0016042 lipid catabolic process,GO:0016787 hydrolase activity";kegg_pathways="Glycerolipid metabolism (ko00561),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.1 Utilization of lipids,SW 2.4.1.4 Utilization of lipids/ other,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="lip,lipA";derives_from=BSGatlas-gene-346 basu168 BSGatlas UTR 292844 292895 . + . ID=BSGatlas-3'UTR-87;Parent=BSGatlas-transcript-281;comment="3'UTR" basu168 BSGatlas transcript 292881 293301 . - . ID=BSGatlas-transcript-282;color=#B37924;Parent=BSGatlas-gene-347;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 292881 293264 . - . ID=BSGatlas-gene-347;color=#3474B3;Name=yczC;locus_tag=BSU_02710,BSU02710 basu168 BSGatlas CDS 292881 293264 . - 0 ID=BSGatlas-gene-347_transcribed;color=#3474B3;Name=yczC;Parent=BSGatlas-transcript-282;comment="putative integral membrane protein of unknownfunction";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yczC";derives_from=BSGatlas-gene-347 basu168 BSGatlas UTR 293265 293301 . - . ID=BSGatlas-5'UTR-164;Parent=BSGatlas-transcript-282;comment="5'UTR" basu168 BSGatlas transcript 293466 294591 . + . ID=BSGatlas-transcript-283;color=#FF9900;Parent=BSGatlas-gene-348;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 293466 293498 . + . ID=BSGatlas-5'UTR-165;Parent=BSGatlas-transcript-283;comment="5'UTR" basu168 BSGatlas gene 293499 294575 . + . ID=BSGatlas-gene-348;color=#1E90FF;Name=yccF;locus_tag=BSU_02720,BSU02720 basu168 BSGatlas CDS 293499 294575 . + 0 ID=BSGatlas-gene-348_transcribed;color=#1E90FF;Name=yccF;Parent=BSGatlas-transcript-283;comment="conserved protein of unknown function";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0005524 ATP binding";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yccF";derives_from=BSGatlas-gene-348 basu168 BSGatlas transcript 294570 296315 . - . ID=BSGatlas-transcript-285;color=#B37924;Parent=BSGatlas-gene-350,BSGatlas-gene-349;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 294570 295571 . - . ID=BSGatlas-transcript-284;color=#B37924;Parent=BSGatlas-gene-349;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 294570 294614 . - . ID=BSGatlas-3'UTR-88;Parent=BSGatlas-transcript-284,BSGatlas-transcript-285;comment="3'UTR" basu168 BSGatlas UTR 294576 294591 . + . ID=BSGatlas-3'UTR-89;Parent=BSGatlas-transcript-283;comment="3'UTR" basu168 BSGatlas transcript 294615 296315 . - . ID=BSGatlas-transcript-287;color=#B37924;Parent=BSGatlas-gene-350,BSGatlas-gene-349;comment="Based on: SubtiWiki" basu168 BSGatlas gene 294615 295571 . - . ID=BSGatlas-gene-349;color=#3474B3;Name=natK;locus_tag=BSU_02730,BSU02730 basu168 BSGatlas transcript 294615 295571 . - . ID=BSGatlas-transcript-286;color=#B37924;Parent=BSGatlas-gene-349;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas CDS 294615 295571 . - 0 ID=BSGatlas-gene-349_transcribed;color=#3474B3;Name=natK;Parent=BSGatlas-transcript-284,BSGatlas-transcript-285,BSGatlas-transcript-286,BSGatlas-transcript-287;comment="two-component sensor histidine kinase [NatR]";go="GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0018106 peptidyl-histidine phosphorylation,GO:0031975 envelope";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="natK,yccG";derives_from=BSGatlas-gene-349 basu168 BSGatlas transcript 295584 296315 . - . ID=BSGatlas-transcript-288;color=#B37924;Parent=BSGatlas-gene-350;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas gene 295584 296285 . - . ID=BSGatlas-gene-350;color=#3474B3;Name=natR;locus_tag=BSU_02740,BSU02740 basu168 BSGatlas CDS 295584 296285 . - 0 ID=BSGatlas-gene-350_transcribed;color=#3474B3;Name=natR;Parent=BSGatlas-transcript-285,BSGatlas-transcript-287,BSGatlas-transcript-288;comment="two-component response regulator [NatK]";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.2 Sodium uptake/ export,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="natR,yccH";derives_from=BSGatlas-gene-350 basu168 BSGatlas UTR 296286 296315 . - . ID=BSGatlas-5'UTR-166;Parent=BSGatlas-transcript-285,BSGatlas-transcript-287,BSGatlas-transcript-288;comment="5'UTR" basu168 BSGatlas transcript 296394 298374 . + . ID=BSGatlas-transcript-289;color=#FF9900;Parent=BSGatlas-gene-351,BSGatlas-gene-352;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 296394 296428 . + . ID=BSGatlas-5'UTR-167;Parent=BSGatlas-transcript-289;comment="5'UTR" basu168 BSGatlas gene 296429 297169 . + . ID=BSGatlas-gene-351;color=#1E90FF;Name=natA;locus_tag=BSU_02750,BSU02750 basu168 BSGatlas CDS 296429 297169 . + 0 ID=BSGatlas-gene-351_transcribed;color=#1E90FF;Name=natA;Parent=BSGatlas-transcript-289;comment="Na+ ABC efflux transporter (ATP-bindingprotein)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0006811 ion transport,GO:0006814 sodium ion transport,GO:0008152 metabolic process,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";kegg_pathways="ABC transporters (ko02010),Two-component system (ko02020)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.5 Export of ions,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.2 Sodium uptake/ export,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="natA";derives_from=BSGatlas-gene-351 basu168 BSGatlas gene 297170 298330 . + . ID=BSGatlas-gene-352;color=#1E90FF;Name=natB;locus_tag=BSU_02760,BSU02760 basu168 BSGatlas CDS 297170 298330 . + 0 ID=BSGatlas-gene-352_transcribed;color=#1E90FF;Name=natB;Parent=BSGatlas-transcript-289;comment="Na+ ABC efflux transporter (permease)";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006814 sodium ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="ABC transporters (ko02010),Two-component system (ko02020)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.5 Export of ions,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.2 Sodium uptake/ export,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="natB";derives_from=BSGatlas-gene-352 basu168 BSGatlas UTR 298331 298374 . + . ID=BSGatlas-3'UTR-90;Parent=BSGatlas-transcript-289;comment="3'UTR" basu168 BSGatlas transcript 298401 299437 . + . ID=BSGatlas-transcript-290;color=#FF9900;Parent=BSGatlas-gene-353;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 298401 298465 . + . ID=BSGatlas-5'UTR-168;Parent=BSGatlas-transcript-290;comment="5'UTR" basu168 BSGatlas gene 298466 299398 . + . ID=BSGatlas-gene-353;color=#1E90FF;Name=yccK;locus_tag=BSU_02770,BSU02770 basu168 BSGatlas CDS 298466 299398 . + 0 ID=BSGatlas-gene-353_transcribed;color=#1E90FF;Name=yccK;Parent=BSGatlas-transcript-290;comment="putative ion channel associated aldo-ketoreductase";ec="1.-.-.-";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters";synonyms="yccK,yzaE";derives_from=BSGatlas-gene-353 basu168 BSGatlas transcript 299393 300502 . - . ID=BSGatlas-transcript-291;color=#B37924;Parent=BSGatlas-gene-354;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 299393 299437 . - . ID=BSGatlas-3'UTR-91;Parent=BSGatlas-transcript-291;comment="3'UTR" basu168 BSGatlas UTR 299399 299437 . + . ID=BSGatlas-3'UTR-92;Parent=BSGatlas-transcript-290;comment="3'UTR" basu168 BSGatlas gene 299438 300502 . - . ID=BSGatlas-gene-354;color=#3474B3;Name=ycdA;locus_tag=BSU_02780,BSU02780 basu168 BSGatlas CDS 299438 300502 . - 0 ID=BSGatlas-gene-354_transcribed;color=#3474B3;Name=ycdA;Parent=BSGatlas-transcript-291;comment="lipoprotein involved in swarming behaviour";go="GO:0005615 extracellular space,GO:0005886 plasma membrane,GO:0016020 membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.1 Motility and chemotaxis,SW 4.1.1.4 Motility and chemotaxis/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycdA";derives_from=BSGatlas-gene-354 basu168 BSGatlas gene 300522 300681 . - . ID=BSGatlas-gene-355;color=#6B6B6B;Name=TERMseq-predicted-riboswitch basu168 BSGatlas riboswitch 300522 300681 . - . ID=BSGatlas-gene-355_transcribed;color=#6B6B6B;Name=TERMseq-predicted-riboswitch;derives_from=BSGatlas-gene-355 basu168 BSGatlas transcript 300525 300698 . - . ID=BSGatlas-transcript-292;color=#B37924;Parent=BSGatlas-gene-356;comment="Based on: BSGatlas" basu168 BSGatlas gene 300525 300656 . - . ID=BSGatlas-gene-356;color=#3474B3;locus_tag=BSU_02785 basu168 BSGatlas CDS 300525 300656 . - 0 ID=BSGatlas-gene-356_transcribed;color=#3474B3;Parent=BSGatlas-transcript-292;comment="hypothetical protein";synonyms="BSU_02785,NA";derives_from=BSGatlas-gene-356 basu168 BSGatlas UTR 300657 300698 . - . ID=BSGatlas-5'UTR-169;Parent=BSGatlas-transcript-292;comment="5'UTR" basu168 BSGatlas transcript 300830 302391 . + . ID=BSGatlas-transcript-294;color=#FF9900;Parent=BSGatlas-gene-357;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 300830 302248 . + . ID=BSGatlas-gene-357;color=#1E90FF;Name=ycdB;locus_tag=BSU_02790,BSU02790 basu168 BSGatlas CDS 300830 302248 . + 0 ID=BSGatlas-gene-357_transcribed;color=#1E90FF;Name=ycdB;Parent=BSGatlas-transcript-294;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ycdB";derives_from=BSGatlas-gene-357 basu168 BSGatlas UTR 302249 302391 . + . ID=BSGatlas-3'UTR-93;Parent=BSGatlas-transcript-294;comment="3'UTR" basu168 BSGatlas transcript 302355 303796 . + . ID=BSGatlas-transcript-295;color=#FF9900;Parent=BSGatlas-gene-358;comment="Based on: BSGatlas" basu168 BSGatlas UTR 302355 302434 . + . ID=BSGatlas-5'UTR-171;Parent=BSGatlas-transcript-295;comment="5'UTR" basu168 BSGatlas gene 302435 303796 . + . ID=BSGatlas-gene-358;color=#1E90FF;Name=ycdC;locus_tag=BSU_02800,BSU02800 basu168 BSGatlas CDS 302435 303796 . + 0 ID=BSGatlas-gene-358_transcribed;color=#1E90FF;Name=ycdC;Parent=BSGatlas-transcript-295;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ycdC";derives_from=BSGatlas-gene-358 basu168 BSGatlas transcript 303804 304390 . - . ID=BSGatlas-transcript-296;color=#B37924;Parent=BSGatlas-gene-359;comment="Based on: BsubCyc" basu168 BSGatlas gene 303804 304307 . - . ID=BSGatlas-gene-359;color=#3474B3;Name=cwlK;locus_tag=BSU_02810,BSU02810 basu168 BSGatlas CDS 303804 304307 . - 0 ID=BSGatlas-gene-359_transcribed;color=#3474B3;Name=cwlK;Parent=BSGatlas-transcript-296;comment="murein L,D:-endopeptidase";ec="3.4.-.-,EC-3.4";go="GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.1 Autolysis,SW 1.1.3.4 Endopeptidases,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="cwlK,ycdD";derives_from=BSGatlas-gene-359 basu168 BSGatlas UTR 304308 304390 . - . ID=BSGatlas-5'UTR-172;Parent=BSGatlas-transcript-296;comment="5'UTR" basu168 BSGatlas transcript 304379 305595 . + . ID=BSGatlas-transcript-297;color=#FF9900;Parent=BSGatlas-gene-360;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 304379 304429 . + . ID=BSGatlas-5'UTR-173;Parent=BSGatlas-transcript-297;comment="5'UTR" basu168 BSGatlas gene 304430 305551 . + . ID=BSGatlas-gene-360;color=#1E90FF;Name=rapJ;locus_tag=BSU_02820,BSU02820 basu168 BSGatlas CDS 304430 305551 . + 0 ID=BSGatlas-gene-360_transcribed;color=#1E90FF;Name=rapJ;Parent=BSGatlas-transcript-297;comment="response regulator aspartate phosphatase";go="GO:0004721 phosphoprotein phosphatase activity,GO:0008152 metabolic process,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.2 Response regulator aspartate phosphatase";synonyms="rapJ,ycdE";derives_from=BSGatlas-gene-360 basu168 BSGatlas UTR 305552 305595 . + . ID=BSGatlas-3'UTR-94;Parent=BSGatlas-transcript-297;comment="3'UTR" basu168 BSGatlas transcript 305616 308163 . + . ID=BSGatlas-transcript-299;color=#FF9900;Parent=BSGatlas-gene-361,BSGatlas-gene-362;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 305616 308144 . + . ID=BSGatlas-transcript-298;color=#FF9900;Parent=BSGatlas-gene-361,BSGatlas-gene-362;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 305616 305657 . + . ID=BSGatlas-5'UTR-174;Parent=BSGatlas-transcript-298,BSGatlas-transcript-299;comment="5'UTR" basu168 BSGatlas gene 305658 306434 . + . ID=BSGatlas-gene-361;color=#1E90FF;Name=ycdF;locus_tag=BSU_02830,BSU02830 basu168 BSGatlas CDS 305658 306434 . + 0 ID=BSGatlas-gene-361_transcribed;color=#1E90FF;Name=ycdF;Parent=BSGatlas-transcript-298,BSGatlas-transcript-299;comment="putative oxidoreductase";ec="1.1.1.-,1.1.1.47";go="GO:0006950 response to stress,GO:0008152 metabolic process,GO:0016491 oxidoreductase activity,GO:0047936 glucose 1-dehydrogenase [NAD(P)] activity,GO:0055114 oxidation-reduction process";kegg_pathways="Carbon metabolism (ko01200),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Pentose phosphate pathway (ko00030)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ycdF";derives_from=BSGatlas-gene-361 basu168 BSGatlas UTR 306435 306458 . + . ID=BSGatlas-internal_UTR-128;Parent=BSGatlas-transcript-298,BSGatlas-transcript-299;comment="internal_UTR" basu168 BSGatlas gene 306459 308144 . + . ID=BSGatlas-gene-362;color=#1E90FF;Name=ycdG;locus_tag=BSU_02840,BSU02840 basu168 BSGatlas CDS 306459 308144 . + 0 ID=BSGatlas-gene-362_transcribed;color=#1E90FF;Name=ycdG;Parent=BSGatlas-transcript-298,BSGatlas-transcript-299;comment="putative oligo-carbohydrate hydrolase";ec="3.2.1.10";go="GO:0003824 catalytic activity,GO:0004574 oligo-1,6-glucosidase activity,GO:0005737 cytoplasm,GO:0005975 carbohydrate metabolic process,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0043169 cation binding";kegg_pathways="Galactose metabolism (ko00052),Metabolic pathways (ko01100),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ycdG";derives_from=BSGatlas-gene-362 basu168 BSGatlas UTR 308145 308163 . + . ID=BSGatlas-3'UTR-95;Parent=BSGatlas-transcript-299;comment="3'UTR" basu168 BSGatlas transcript 308272 310889 . + . ID=BSGatlas-transcript-303;color=#FF9900;Parent=BSGatlas-gene-363,BSGatlas-gene-364,BSGatlas-gene-365;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 308272 309291 . + . ID=BSGatlas-transcript-302;color=#FF9900;Parent=BSGatlas-gene-363;comment="Based on: BSGatlas" basu168 BSGatlas UTR 308272 308331 . + . ID=BSGatlas-5'UTR-176;Parent=BSGatlas-transcript-302,BSGatlas-transcript-303;comment="5'UTR" basu168 BSGatlas gene 308332 309291 . + . ID=BSGatlas-gene-363;color=#1E90FF;Name=znuA;locus_tag=BSU_02850,BSU02850 basu168 BSGatlas CDS 308332 309291 . + 0 ID=BSGatlas-gene-363_transcribed;color=#1E90FF;Name=znuA;Parent=BSGatlas-transcript-302,BSGatlas-transcript-303;comment="Zn(II)-binding lipoprotein";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006829 zinc ion transport,GO:0007155 cell adhesion,GO:0016020 membrane,GO:0030001 metal ion transport,GO:0046872 metal ion binding";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.6 Uptake of ions,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.3 Zinc,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="adcA,ycdH,znuA";derives_from=BSGatlas-gene-363 basu168 BSGatlas transcript 308911 310889 . + . ID=BSGatlas-transcript-304;color=#FF9900;Parent=BSGatlas-gene-364,BSGatlas-gene-365;comment="Based on: BSGatlas" basu168 BSGatlas UTR 308911 309346 . + . ID=BSGatlas-5'UTR-177;Parent=BSGatlas-transcript-304;comment="5'UTR" basu168 BSGatlas UTR 309292 309346 . + . ID=BSGatlas-internal_UTR-129;Parent=BSGatlas-transcript-303;comment="internal_UTR" basu168 BSGatlas gene 309347 310042 . + . ID=BSGatlas-gene-364;color=#1E90FF;Name=znuC;locus_tag=BSU_02860,BSU02860 basu168 BSGatlas CDS 309347 310042 . + 0 ID=BSGatlas-gene-364_transcribed;color=#1E90FF;Name=znuC;Parent=BSGatlas-transcript-303,BSGatlas-transcript-304;comment="Zn(II) transporter (ATP-binding protein)";ec="3.6.3.-";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006829 zinc ion transport,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.6 Uptake of ions,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.3 Zinc,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="adcC,ycdI,znuC";derives_from=BSGatlas-gene-364 basu168 BSGatlas gene 310000 310842 . + . ID=BSGatlas-gene-365;color=#1E90FF;Name=znuB;locus_tag=BSU_02870,BSU02870 basu168 BSGatlas CDS 310000 310842 . + 0 ID=BSGatlas-gene-365_transcribed;color=#1E90FF;Name=znuB;Parent=BSGatlas-transcript-303,BSGatlas-transcript-304;comment="high affinity Zn(II) ABC transporter (permease)";go="GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006829 zinc ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0042626 ATPase activity, coupled to transmembrane movement of substances,GO:0055085 transmembrane transport";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.6 Uptake of ions,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.3 Zinc,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="adcB,yceA,znuB";derives_from=BSGatlas-gene-365 basu168 BSGatlas UTR 310843 310889 . + . ID=BSGatlas-3'UTR-96;Parent=BSGatlas-transcript-303,BSGatlas-transcript-304;comment="3'UTR" basu168 BSGatlas transcript 310880 311915 . - . ID=BSGatlas-transcript-305;color=#B37924;Parent=BSGatlas-gene-366;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 310880 311875 . - . ID=BSGatlas-gene-366;color=#3474B3;Name=yceB;locus_tag=BSU_02880,BSU02880 basu168 BSGatlas CDS 310880 311875 . - 0 ID=BSGatlas-gene-366_transcribed;color=#3474B3;Name=yceB;Parent=BSGatlas-transcript-305;comment="putative luciferase-like monooxygenase";go="GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yceB";derives_from=BSGatlas-gene-366 basu168 BSGatlas transcript 311859 317651 . + . ID=BSGatlas-transcript-308;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370,BSGatlas-gene-371,BSGatlas-gene-372;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 311859 317603 . + . ID=BSGatlas-transcript-307;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370,BSGatlas-gene-371,BSGatlas-gene-372;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 311859 314798 . + . ID=BSGatlas-transcript-306;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 311859 312158 . + . ID=BSGatlas-5'UTR-178;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308;comment="5'UTR" basu168 BSGatlas UTR 311876 311915 . - . ID=BSGatlas-5'UTR-179;Parent=BSGatlas-transcript-305;comment="5'UTR" basu168 BSGatlas transcript 312067 317651 . + . ID=BSGatlas-transcript-311;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370,BSGatlas-gene-371,BSGatlas-gene-372;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 312067 317603 . + . ID=BSGatlas-transcript-310;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370,BSGatlas-gene-371,BSGatlas-gene-372;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 312067 314798 . + . ID=BSGatlas-transcript-309;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 312067 312158 . + . ID=BSGatlas-5'UTR-180;Parent=BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311;comment="5'UTR" basu168 BSGatlas transcript 312080 317651 . + . ID=BSGatlas-transcript-314;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370,BSGatlas-gene-371,BSGatlas-gene-372;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 312080 317603 . + . ID=BSGatlas-transcript-313;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370,BSGatlas-gene-371,BSGatlas-gene-372;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 312080 314798 . + . ID=BSGatlas-transcript-312;color=#FF9900;Parent=BSGatlas-gene-367,BSGatlas-gene-368,BSGatlas-gene-369,BSGatlas-gene-370;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 312080 312158 . + . ID=BSGatlas-5'UTR-181;Parent=BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="5'UTR" basu168 BSGatlas gene 312159 312758 . + . ID=BSGatlas-gene-367;color=#1E90FF;Name=yceC;locus_tag=BSU_02890,BSU02890 basu168 BSGatlas CDS 312159 312758 . + 0 ID=BSGatlas-gene-367_transcribed;color=#1E90FF;Name=yceC;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="putative stress adaptation protein (telluriteresistance)";go="GO:0005737 cytoplasm,GO:0006950 response to stress";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.12 Resistance against toxic metals/ based on similarity,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="yceC";derives_from=BSGatlas-gene-367 basu168 BSGatlas UTR 312759 312779 . + . ID=BSGatlas-internal_UTR-130;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="internal_UTR" basu168 BSGatlas gene 312780 313361 . + . ID=BSGatlas-gene-368;color=#1E90FF;Name=yceD;locus_tag=BSU_02900,BSU02900 basu168 BSGatlas CDS 312780 313361 . + 0 ID=BSGatlas-gene-368_transcribed;color=#1E90FF;Name=yceD;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="putative stress adaptation protein (telluriteresistance)";go="GO:0006950 response to stress";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.12 Resistance against toxic metals/ based on similarity,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yceD";derives_from=BSGatlas-gene-368 basu168 BSGatlas UTR 313362 313395 . + . ID=BSGatlas-internal_UTR-131;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="internal_UTR" basu168 BSGatlas gene 313396 313974 . + . ID=BSGatlas-gene-369;color=#1E90FF;Name=yceE;locus_tag=BSU_02910,BSU02910 basu168 BSGatlas CDS 313396 313974 . + 0 ID=BSGatlas-gene-369_transcribed;color=#1E90FF;Name=yceE;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="putative stress adaptation protein (telluriteresistance)";go="GO:0006950 response to stress";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.12 Resistance against toxic metals/ based on similarity,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="yceE";derives_from=BSGatlas-gene-369 basu168 BSGatlas UTR 313975 314024 . + . ID=BSGatlas-internal_UTR-132;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="internal_UTR" basu168 BSGatlas gene 314025 314798 . + . ID=BSGatlas-gene-370;color=#1E90FF;Name=yceF;locus_tag=BSU_02920,BSU02920 basu168 BSGatlas CDS 314025 314798 . + 0 ID=BSGatlas-gene-370_transcribed;color=#1E90FF;Name=yceF;Parent=BSGatlas-transcript-306,BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-309,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-312,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="putative stress adaptation transporter(tellurite resistance)";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.2 Manganese,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yceF";derives_from=BSGatlas-gene-370 basu168 BSGatlas UTR 314799 314882 . + . ID=BSGatlas-internal_UTR-133;Parent=BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="internal_UTR" basu168 BSGatlas gene 314883 316496 . + . ID=BSGatlas-gene-371;color=#1E90FF;Name=yceG;locus_tag=BSU_02930,BSU02930 basu168 BSGatlas CDS 314883 316496 . + 0 ID=BSGatlas-gene-371_transcribed;color=#1E90FF;Name=yceG;Parent=BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="putative toxic compound adaptation protein(tellurite resistance)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="yceG";derives_from=BSGatlas-gene-371 basu168 BSGatlas gene 316512 317603 . + . ID=BSGatlas-gene-372;color=#1E90FF;Name=yceH;locus_tag=BSU_02940,BSU02940 basu168 BSGatlas CDS 316512 317603 . + 0 ID=BSGatlas-gene-372_transcribed;color=#1E90FF;Name=yceH;Parent=BSGatlas-transcript-307,BSGatlas-transcript-308,BSGatlas-transcript-310,BSGatlas-transcript-311,BSGatlas-transcript-313,BSGatlas-transcript-314;comment="putative reactive oxygen species resistanceprotein";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="yceH";derives_from=BSGatlas-gene-372 basu168 BSGatlas UTR 317604 317651 . + . ID=BSGatlas-3'UTR-97;Parent=BSGatlas-transcript-308,BSGatlas-transcript-311,BSGatlas-transcript-314;comment="3'UTR" basu168 BSGatlas transcript 317687 318927 . + . ID=BSGatlas-transcript-315;color=#FF9900;Parent=BSGatlas-gene-373;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 317687 317724 . + . ID=BSGatlas-5'UTR-182;Parent=BSGatlas-transcript-315;comment="5'UTR" basu168 BSGatlas gene 317725 318927 . + . ID=BSGatlas-gene-373;color=#1E90FF;Name=niaP;locus_tag=BSU_02950,BSU02950 basu168 BSGatlas CDS 317725 318927 . + 0 ID=BSGatlas-gene-373_transcribed;color=#1E90FF;Name=niaP;Parent=BSGatlas-transcript-315;comment="niacin permease";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.7 Transporter for cofactors,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.11 Biosynthesis of NAD(P),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="niaP,yceI";derives_from=BSGatlas-gene-373 basu168 BSGatlas gene 319011 319078 . + . ID=BSGatlas-gene-374;color=#00FF00;Name=Bacillaceae-1 basu168 BSGatlas sRNA 319011 319078 . + . ID=BSGatlas-gene-374_transcribed;color=#00FF00;Name=Bacillaceae-1;derives_from=BSGatlas-gene-374 basu168 BSGatlas gene 319180 320352 . - . ID=BSGatlas-gene-375;color=#3474B3;Name=yceJ;locus_tag=BSU_02960,BSU02960 basu168 BSGatlas transcript 319180 320352 . - . ID=BSGatlas-transcript-316;color=#B37924;Parent=BSGatlas-gene-375;comment="Based on: BSGatlas" basu168 BSGatlas CDS 319180 320352 . - 0 ID=BSGatlas-gene-375_transcribed;color=#3474B3;Name=yceJ;Parent=BSGatlas-transcript-316;comment="putative carbohydrate transporter (possiblyexporter)";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yceJ";derives_from=BSGatlas-gene-375 basu168 BSGatlas gene 320421 320723 . - . ID=BSGatlas-gene-376;color=#3474B3;Name=yceK;locus_tag=BSU_02970,BSU02970 basu168 BSGatlas transcript 320421 320723 . - . ID=BSGatlas-transcript-317;color=#B37924;Parent=BSGatlas-gene-376;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas CDS 320421 320723 . - 0 ID=BSGatlas-gene-376_transcribed;color=#3474B3;Name=yceK;Parent=BSGatlas-transcript-317;comment="putative transcriptional regulator (ArsRfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yceK";derives_from=BSGatlas-gene-376 basu168 BSGatlas transcript 320952 324042 . + . ID=BSGatlas-transcript-319;color=#FF9900;Parent=BSGatlas-gene-377,BSGatlas-gene-378,BSGatlas-gene-379;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 320952 324000 . + . ID=BSGatlas-transcript-318;color=#FF9900;Parent=BSGatlas-gene-377,BSGatlas-gene-378,BSGatlas-gene-379;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 320952 321012 . + . ID=BSGatlas-5'UTR-183;Parent=BSGatlas-transcript-318,BSGatlas-transcript-319;comment="5'UTR" basu168 BSGatlas transcript 320989 324042 . + . ID=BSGatlas-transcript-321;color=#FF9900;Parent=BSGatlas-gene-377,BSGatlas-gene-378,BSGatlas-gene-379;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 320989 324000 . + . ID=BSGatlas-transcript-320;color=#FF9900;Parent=BSGatlas-gene-377,BSGatlas-gene-378,BSGatlas-gene-379;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 320989 321012 . + . ID=BSGatlas-5'UTR-184;Parent=BSGatlas-transcript-320,BSGatlas-transcript-321;comment="5'UTR" basu168 BSGatlas transcript 320990 324042 . + . ID=BSGatlas-transcript-323;color=#FF9900;Parent=BSGatlas-gene-377,BSGatlas-gene-378,BSGatlas-gene-379;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 320990 324000 . + . ID=BSGatlas-transcript-322;color=#FF9900;Parent=BSGatlas-gene-377,BSGatlas-gene-378,BSGatlas-gene-379;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 320990 321012 . + . ID=BSGatlas-5'UTR-185;Parent=BSGatlas-transcript-322,BSGatlas-transcript-323;comment="5'UTR" basu168 BSGatlas gene 321013 322269 . + . ID=BSGatlas-gene-377;color=#1E90FF;Name=opuAA;locus_tag=BSU_02980,BSU02980 basu168 BSGatlas CDS 321013 322269 . + 0 ID=BSGatlas-gene-377_transcribed;color=#1E90FF;Name=opuAA;Parent=BSGatlas-transcript-318,BSGatlas-transcript-319,BSGatlas-transcript-320,BSGatlas-transcript-321,BSGatlas-transcript-322,BSGatlas-transcript-323;comment="L-proline betaine and betonicine ABC transporter(ATP-binding protein)";ec="3.6.3.32";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0006865 amino acid transport,GO:0008152 metabolic process,GO:0015418 quaternary-ammonium-compound-transporting ATPase activity,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity,GO:0030554 adenyl nucleotide binding,GO:0031460 glycine betaine transport,GO:0055085 transmembrane transport";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.4 Uptake of compatible solutes for osmoprotection,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.6 Coping with hyper-osmotic stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="opuAA";derives_from=BSGatlas-gene-377 basu168 BSGatlas gene 322271 323119 . + . ID=BSGatlas-gene-378;color=#1E90FF;Name=opuAB;locus_tag=BSU_02990,BSU02990 basu168 BSGatlas CDS 322271 323119 . + 0 ID=BSGatlas-gene-378_transcribed;color=#1E90FF;Name=opuAB;Parent=BSGatlas-transcript-318,BSGatlas-transcript-319,BSGatlas-transcript-320,BSGatlas-transcript-321,BSGatlas-transcript-322,BSGatlas-transcript-323;comment="L-proline betaine and betonicine ABC transporter(permease)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.4 Uptake of compatible solutes for osmoprotection,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.6 Coping with hyper-osmotic stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="opuAB";derives_from=BSGatlas-gene-378 basu168 BSGatlas gene 323119 324000 . + . ID=BSGatlas-gene-379;color=#1E90FF;Name=opuAC;locus_tag=BSU_03000,BSU03000 basu168 BSGatlas CDS 323119 324000 . + 0 ID=BSGatlas-gene-379_transcribed;color=#1E90FF;Name=opuAC;Parent=BSGatlas-transcript-318,BSGatlas-transcript-319,BSGatlas-transcript-320,BSGatlas-transcript-321,BSGatlas-transcript-322,BSGatlas-transcript-323;comment="L-proline betaine and betonicine ABC transporterABC transporter (glycine betaine-binding lipoprotein)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0016020 membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.4 Uptake of compatible solutes for osmoprotection,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.6 Coping with hyper-osmotic stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="opuAC";derives_from=BSGatlas-gene-379 basu168 BSGatlas transcript 323994 325266 . - . ID=BSGatlas-transcript-324;color=#B37924;Parent=BSGatlas-gene-380;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 323994 324037 . - . ID=BSGatlas-3'UTR-98;Parent=BSGatlas-transcript-324;comment="3'UTR" basu168 BSGatlas UTR 324001 324042 . + . ID=BSGatlas-3'UTR-99;Parent=BSGatlas-transcript-319,BSGatlas-transcript-321,BSGatlas-transcript-323;comment="3'UTR" basu168 BSGatlas gene 324038 325189 . - . ID=BSGatlas-gene-380;color=#3474B3;Name=amhX;locus_tag=BSU_03010,BSU03010 basu168 BSGatlas CDS 324038 325189 . - 0 ID=BSGatlas-gene-380_transcribed;color=#3474B3;Name=amhX;Parent=BSGatlas-transcript-324;comment="putative amidohydrolase";ec="3.5.1.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="amhX";derives_from=BSGatlas-gene-380 basu168 BSGatlas UTR 325190 325266 . - . ID=BSGatlas-5'UTR-186;Parent=BSGatlas-transcript-324;comment="5'UTR" basu168 BSGatlas transcript 325280 326818 . + . ID=BSGatlas-transcript-325;color=#FF9900;Parent=BSGatlas-gene-381;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 325280 325338 . + . ID=BSGatlas-5'UTR-187;Parent=BSGatlas-transcript-325;comment="5'UTR" basu168 BSGatlas gene 325339 326772 . + . ID=BSGatlas-gene-381;color=#1E90FF;Name=ycgA;locus_tag=BSU_03020,BSU03020 basu168 BSGatlas CDS 325339 326772 . + 0 ID=BSGatlas-gene-381_transcribed;color=#1E90FF;Name=ycgA;Parent=BSGatlas-transcript-325;comment="putative branched chain amino acid permease";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ycgA";derives_from=BSGatlas-gene-381 basu168 BSGatlas transcript 326116 329661 . + . ID=BSGatlas-transcript-327;color=#FF9900;Parent=BSGatlas-gene-382,BSGatlas-gene-383;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 326116 327469 . + . ID=BSGatlas-transcript-326;color=#FF9900;Parent=BSGatlas-gene-382;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 326116 326887 . + . ID=BSGatlas-5'UTR-188;Parent=BSGatlas-transcript-326,BSGatlas-transcript-327;comment="5'UTR" basu168 BSGatlas UTR 326773 326818 . + . ID=BSGatlas-3'UTR-100;Parent=BSGatlas-transcript-325;comment="3'UTR" basu168 BSGatlas transcript 326846 329661 . + . ID=BSGatlas-transcript-329;color=#FF9900;Parent=BSGatlas-gene-382,BSGatlas-gene-383;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 326846 327469 . + . ID=BSGatlas-transcript-328;color=#FF9900;Parent=BSGatlas-gene-382;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 326846 326887 . + . ID=BSGatlas-5'UTR-189;Parent=BSGatlas-transcript-328,BSGatlas-transcript-329;comment="5'UTR" basu168 BSGatlas gene 326888 327469 . + . ID=BSGatlas-gene-382;color=#1E90FF;Name=ycgB;locus_tag=BSU_03030,BSU03030 basu168 BSGatlas CDS 326888 327469 . + 0 ID=BSGatlas-gene-382_transcribed;color=#1E90FF;Name=ycgB;Parent=BSGatlas-transcript-326,BSGatlas-transcript-327,BSGatlas-transcript-328,BSGatlas-transcript-329;comment="putative integral inner membrane protein ofunknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ycgB";derives_from=BSGatlas-gene-382 basu168 BSGatlas transcript 327282 329661 . + . ID=BSGatlas-transcript-330;color=#FF9900;Parent=BSGatlas-gene-383;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 327282 327617 . + . ID=BSGatlas-5'UTR-190;Parent=BSGatlas-transcript-330;comment="5'UTR" basu168 BSGatlas UTR 327470 327617 . + . ID=BSGatlas-internal_UTR-134;Parent=BSGatlas-transcript-327,BSGatlas-transcript-329;comment="internal_UTR" basu168 BSGatlas transcript 327497 329661 . + . ID=BSGatlas-transcript-331;color=#FF9900;Parent=BSGatlas-gene-383;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 327497 327617 . + . ID=BSGatlas-5'UTR-191;Parent=BSGatlas-transcript-331;comment="5'UTR" basu168 BSGatlas gene 327618 329597 . + . ID=BSGatlas-gene-383;color=#1E90FF;Name=amyE;locus_tag=BSU_03040,BSU03040 basu168 BSGatlas CDS 327618 329597 . + 0 ID=BSGatlas-gene-383_transcribed;color=#1E90FF;Name=amyE;Parent=BSGatlas-transcript-327,BSGatlas-transcript-329,BSGatlas-transcript-330,BSGatlas-transcript-331;comment="alpha-amylase";ec="3.2.1.1,EC-3.2.1.1;EC-3.2.1";go="GO:0003824 catalytic activity,GO:0004556 alpha-amylase activity,GO:0005576 extracellular region,GO:0005975 carbohydrate metabolic process,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0043169 cation binding,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.23 Utilization of starch/ maltodextrin,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="amyA,amyE";derives_from=BSGatlas-gene-383 basu168 BSGatlas UTR 329598 329661 . + . ID=BSGatlas-3'UTR-101;Parent=BSGatlas-transcript-327,BSGatlas-transcript-329,BSGatlas-transcript-330,BSGatlas-transcript-331;comment="3'UTR" basu168 BSGatlas transcript 329715 332445 . + . ID=BSGatlas-transcript-333;color=#FF9900;Parent=BSGatlas-gene-384,BSGatlas-gene-385;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 329715 330799 . + . ID=BSGatlas-transcript-332;color=#FF9900;Parent=BSGatlas-gene-384;comment="Based on: BSGatlas" basu168 BSGatlas UTR 329715 329773 . + . ID=BSGatlas-5'UTR-192;Parent=BSGatlas-transcript-332,BSGatlas-transcript-333;comment="5'UTR" basu168 BSGatlas gene 329774 330739 . + . ID=BSGatlas-gene-384;color=#1E90FF;Name=ldh;locus_tag=BSU_03050,BSU03050 basu168 BSGatlas CDS 329774 330739 . + 0 ID=BSGatlas-gene-384_transcribed;color=#1E90FF;Name=ldh;Parent=BSGatlas-transcript-332,BSGatlas-transcript-333;comment="L-lactate dehydrogenase";ec="1.1.1.27,EC-1.1.1.27";go="GO:0003824 catalytic activity,GO:0004459 L-lactate dehydrogenase activity,GO:0005737 cytoplasm,GO:0005975 carbohydrate metabolic process,GO:0006096 glycolytic process,GO:0016491 oxidoreductase activity,GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,GO:0044262 cellular carbohydrate metabolic process,GO:0055114 oxidation-reduction process";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Cysteine and methionine metabolism (ko00270),Glycolysis / Gluconeogenesis (ko00010),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Propanoate metabolism (ko00640),Pyruvate metabolism (ko00620)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.1 Carbon core metabolism,SW 2.2.1.5 Overflow metabolism,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.7 Phosphorylation on a Tyr residue";synonyms="lctE,ldh";derives_from=BSGatlas-gene-384 basu168 BSGatlas UTR 330740 330799 . + . ID=BSGatlas-3'UTR-102;Parent=BSGatlas-transcript-332;comment="3'UTR" basu168 BSGatlas UTR 330740 330770 . + . ID=BSGatlas-internal_UTR-135;Parent=BSGatlas-transcript-333;comment="internal_UTR" basu168 BSGatlas gene 330771 332396 . + . ID=BSGatlas-gene-385;color=#1E90FF;Name=lctP;locus_tag=BSU_03060,BSU03060 basu168 BSGatlas CDS 330771 332396 . + 0 ID=BSGatlas-gene-385_transcribed;color=#1E90FF;Name=lctP;Parent=BSGatlas-transcript-333;comment="L-lactate permease";go="GO:0005886 plasma membrane,GO:0005887 integral component of plasma membrane,GO:0006810 transport,GO:0015129 lactate transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0035873 lactate transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.4 Transporter for organic acids,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.1 Carbon core metabolism,SW 2.2.1.5 Overflow metabolism,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lctP,ycgC";derives_from=BSGatlas-gene-385 basu168 BSGatlas transcript 332391 334062 . - . ID=BSGatlas-transcript-335;color=#B37924;Parent=BSGatlas-gene-386;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 332391 332440 . - . ID=BSGatlas-3'UTR-103;Parent=BSGatlas-transcript-335;comment="3'UTR" basu168 BSGatlas UTR 332397 332445 . + . ID=BSGatlas-3'UTR-104;Parent=BSGatlas-transcript-333;comment="3'UTR" basu168 BSGatlas transcript 332441 334062 . - . ID=BSGatlas-transcript-337;color=#B37924;Parent=BSGatlas-gene-386;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas gene 332441 333979 . - . ID=BSGatlas-gene-386;color=#3474B3;Name=mdr;locus_tag=BSU_03070,BSU03070 basu168 BSGatlas CDS 332441 333979 . - 0 ID=BSGatlas-gene-386_transcribed;color=#3474B3;Name=mdr;Parent=BSGatlas-transcript-335,BSGatlas-transcript-337;comment="multidrug-efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0046677 response to antibiotic,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.11 Other exporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="bmr3,mdr,ycgD";derives_from=BSGatlas-gene-386 basu168 BSGatlas UTR 333980 334062 . - . ID=BSGatlas-5'UTR-193;Parent=BSGatlas-transcript-335,BSGatlas-transcript-337;comment="5'UTR" basu168 BSGatlas transcript 334027 336123 . + . ID=BSGatlas-transcript-338;color=#FF9900;Parent=BSGatlas-gene-387,BSGatlas-gene-388,BSGatlas-gene-389;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 334027 334091 . + . ID=BSGatlas-5'UTR-194;Parent=BSGatlas-transcript-338;comment="5'UTR" basu168 BSGatlas gene 334092 334556 . + . ID=BSGatlas-gene-387;color=#1E90FF;Name=ycgE;locus_tag=BSU_03080,BSU03080 basu168 BSGatlas CDS 334092 334556 . + 0 ID=BSGatlas-gene-387_transcribed;color=#1E90FF;Name=ycgE;Parent=BSGatlas-transcript-338;comment="putative transcriptional regulator";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ycgE";derives_from=BSGatlas-gene-387 basu168 BSGatlas UTR 334557 334629 . + . ID=BSGatlas-internal_UTR-136;Parent=BSGatlas-transcript-338;comment="internal_UTR" basu168 BSGatlas transcript 334600 336123 . + . ID=BSGatlas-transcript-339;color=#FF9900;Parent=BSGatlas-gene-388,BSGatlas-gene-389;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 334600 334629 . + . ID=BSGatlas-5'UTR-195;Parent=BSGatlas-transcript-339;comment="5'UTR" basu168 BSGatlas gene 334630 335259 . + . ID=BSGatlas-gene-388;color=#1E90FF;Name=ycgF;locus_tag=BSU_03090,BSU03090 basu168 BSGatlas CDS 334630 335259 . + 0 ID=BSGatlas-gene-388_transcribed;color=#1E90FF;Name=ycgF;Parent=BSGatlas-transcript-338,BSGatlas-transcript-339;comment="putative aminoacid export permease";go="GO:0005886 plasma membrane,GO:0006865 amino acid transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycgF";derives_from=BSGatlas-gene-388 basu168 BSGatlas UTR 335260 335328 . + . ID=BSGatlas-internal_UTR-137;Parent=BSGatlas-transcript-338,BSGatlas-transcript-339;comment="internal_UTR" basu168 BSGatlas transcript 335301 336123 . + . ID=BSGatlas-transcript-340;color=#FF9900;Parent=BSGatlas-gene-389;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 335301 335328 . + . ID=BSGatlas-5'UTR-196;Parent=BSGatlas-transcript-340;comment="5'UTR" basu168 BSGatlas gene 335329 336090 . + . ID=BSGatlas-gene-389;color=#1E90FF;Name=ycgG;locus_tag=BSU_03100,BSU03100 basu168 BSGatlas CDS 335329 336090 . + 0 ID=BSGatlas-gene-389_transcribed;color=#1E90FF;Name=ycgG;Parent=BSGatlas-transcript-338,BSGatlas-transcript-339,BSGatlas-transcript-340;comment="conserved protein of unknown function (similarto phage protein)";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="ycgG";derives_from=BSGatlas-gene-389 basu168 BSGatlas UTR 336091 336123 . + . ID=BSGatlas-3'UTR-106;Parent=BSGatlas-transcript-338,BSGatlas-transcript-339,BSGatlas-transcript-340;comment="3'UTR" basu168 BSGatlas transcript 336092 337469 . - . ID=BSGatlas-transcript-4882;color=#B37924;Parent=BSGatlas-gene-390;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 336092 337432 . - . ID=BSGatlas-gene-390;color=#3474B3;Name=ycgH;locus_tag=BSU_03110,BSU03110 basu168 BSGatlas CDS 336092 337432 . - 0 ID=BSGatlas-gene-390_transcribed;color=#3474B3;Name=ycgH;Parent=BSGatlas-transcript-4882;comment="putative amino acid transporter";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0015171 amino acid transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycgH";derives_from=BSGatlas-gene-390 basu168 BSGatlas UTR 337433 337469 . - . ID=BSGatlas-5'UTR-197;Parent=BSGatlas-transcript-4882;comment="5'UTR" basu168 BSGatlas transcript 337525 338158 . + . ID=BSGatlas-transcript-342;color=#FF9900;Parent=BSGatlas-gene-391;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 337525 337561 . + . ID=BSGatlas-5'UTR-198;Parent=BSGatlas-transcript-342;comment="5'UTR" basu168 BSGatlas gene 337562 338158 . + . ID=BSGatlas-gene-391;color=#1E90FF;Name=ycgI;locus_tag=BSU_03120,BSU03120 basu168 BSGatlas CDS 337562 338158 . + 0 ID=BSGatlas-gene-391_transcribed;color=#1E90FF;Name=ycgI;Parent=BSGatlas-transcript-342;comment="xenotiotic metabolite methyltransferase";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="ycgI";derives_from=BSGatlas-gene-391 basu168 BSGatlas transcript 338204 339150 . + . ID=BSGatlas-transcript-344;color=#FF9900;Parent=BSGatlas-gene-392;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 338204 339106 . + . ID=BSGatlas-transcript-343;color=#FF9900;Parent=BSGatlas-gene-392;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 338204 338287 . + . ID=BSGatlas-5'UTR-199;Parent=BSGatlas-transcript-343,BSGatlas-transcript-344;comment="5'UTR" basu168 BSGatlas transcript 338255 339150 . + . ID=BSGatlas-transcript-346;color=#FF9900;Parent=BSGatlas-gene-392;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 338255 339106 . + . ID=BSGatlas-transcript-345;color=#FF9900;Parent=BSGatlas-gene-392;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 338255 338287 . + . ID=BSGatlas-5'UTR-200;Parent=BSGatlas-transcript-345,BSGatlas-transcript-346;comment="5'UTR" basu168 BSGatlas gene 338288 339106 . + . ID=BSGatlas-gene-392;color=#1E90FF;Name=nadE;locus_tag=BSU_03130,BSU03130 basu168 BSGatlas CDS 338288 339106 . + 0 ID=BSGatlas-gene-392_transcribed;color=#1E90FF;Name=nadE;Parent=BSGatlas-transcript-343,BSGatlas-transcript-344,BSGatlas-transcript-345,BSGatlas-transcript-346;comment="ammonium-dependent NAD+ synthetase";ec="6.3.1.5";go="GO:0000166 nucleotide binding,GO:0003952 NAD+ synthase (glutamine-hydrolyzing) activity,GO:0005524 ATP binding,GO:0006950 response to stress,GO:0008795 NAD+ synthase activity,GO:0009435 NAD biosynthetic process,GO:0016874 ligase activity,GO:0030435 sporulation resulting in formation of a cellular spore";kegg_pathways="Metabolic pathways (ko01100),Nicotinate and nicotinamide metabolism (ko00760)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.11 Biosynthesis of NAD(P),SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="gsp-81,nadE,outB,tscBGH";derives_from=BSGatlas-gene-392 basu168 BSGatlas transcript 339102 339779 . - . ID=BSGatlas-transcript-348;color=#B37924;Parent=BSGatlas-gene-393;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 339102 339155 . - . ID=BSGatlas-3'UTR-108;Parent=BSGatlas-transcript-348;comment="3'UTR" basu168 BSGatlas UTR 339107 339150 . + . ID=BSGatlas-3'UTR-109;Parent=BSGatlas-transcript-344,BSGatlas-transcript-346;comment="3'UTR" basu168 BSGatlas transcript 339141 339779 . - . ID=BSGatlas-transcript-349;color=#B37924;Parent=BSGatlas-gene-393;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 339141 339155 . - . ID=BSGatlas-3'UTR-110;Parent=BSGatlas-transcript-349;comment="3'UTR" basu168 BSGatlas gene 339156 339749 . - . ID=BSGatlas-gene-393;color=#3474B3;Name=tmrB;locus_tag=BSU_03140,BSU03140 basu168 BSGatlas CDS 339156 339749 . - 0 ID=BSGatlas-gene-393_transcribed;color=#3474B3;Name=tmrB;Parent=BSGatlas-transcript-348,BSGatlas-transcript-349;comment="ATP-binding tunicamycin resistance protein";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0046677 response to antibiotic";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tmrB";derives_from=BSGatlas-gene-393 basu168 BSGatlas UTR 339750 339779 . - . ID=BSGatlas-5'UTR-201;Parent=BSGatlas-transcript-348,BSGatlas-transcript-349;comment="5'UTR" basu168 BSGatlas gene 339807 339955 . - . ID=BSGatlas-gene-394;color=#8F1D1D;Name=S111;locus_tag=new_339807_339955_c basu168 BSGatlas transcript 339807 339955 . - . ID=BSGatlas-transcript-350;color=#B37924;Parent=BSGatlas-gene-394;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 339807 339955 . - . ID=BSGatlas-gene-394_transcribed;color=#8F1D1D;Name=S111;Parent=BSGatlas-transcript-350;synonyms="S111";derives_from=BSGatlas-gene-394 basu168 BSGatlas transcript 339881 340622 . + . ID=BSGatlas-transcript-351;color=#FF9900;Parent=BSGatlas-gene-395;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 339881 340024 . + . ID=BSGatlas-5'UTR-202;Parent=BSGatlas-transcript-351;comment="5'UTR" basu168 BSGatlas transcript 339989 340622 . + . ID=BSGatlas-transcript-352;color=#FF9900;Parent=BSGatlas-gene-395;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 339989 340024 . + . ID=BSGatlas-5'UTR-203;Parent=BSGatlas-transcript-352;comment="5'UTR" basu168 BSGatlas gene 340025 340585 . + . ID=BSGatlas-gene-395;color=#1E90FF;Name=aroK;locus_tag=BSU_03150,BSU03150 basu168 BSGatlas CDS 340025 340585 . + 0 ID=BSGatlas-gene-395_transcribed;color=#1E90FF;Name=aroK;Parent=BSGatlas-transcript-351,BSGatlas-transcript-352;comment="shikimate kinase";ec="2.7.1.71,EC-2.7.1.71";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0004765 shikimate kinase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0008652 cellular amino acid biosynthetic process,GO:0009073 aromatic amino acid family biosynthetic process,GO:0009423 chorismate biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of amino acids (ko01230),Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Phenylalanine tyrosine and tryptophan biosynthesis (ko00400)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.13 Biosynthesis/ acquisition of aromatic amino acids,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="aroI,aroK";derives_from=BSGatlas-gene-395 basu168 BSGatlas UTR 340586 340622 . + . ID=BSGatlas-3'UTR-111;Parent=BSGatlas-transcript-351,BSGatlas-transcript-352;comment="3'UTR" basu168 BSGatlas transcript 340613 341412 . - . ID=BSGatlas-transcript-353;color=#B37924;Parent=BSGatlas-gene-396;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 340613 341374 . - . ID=BSGatlas-gene-396;color=#3474B3;Name=ycgJ;locus_tag=BSU_03160,BSU03160 basu168 BSGatlas CDS 340613 341374 . - 0 ID=BSGatlas-gene-396_transcribed;color=#3474B3;Name=ycgJ;Parent=BSGatlas-transcript-353;comment="xenotiotic metabolite methyltransferase";ec="2.1.1.-";go="GO:0008168 methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ycgJ";derives_from=BSGatlas-gene-396 basu168 BSGatlas UTR 341375 341412 . - . ID=BSGatlas-5'UTR-204;Parent=BSGatlas-transcript-353;comment="5'UTR" basu168 BSGatlas transcript 341441 344360 . + . ID=BSGatlas-transcript-355;color=#FF9900;Parent=BSGatlas-gene-397,BSGatlas-gene-398,BSGatlas-gene-399;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 341441 343543 . + . ID=BSGatlas-transcript-354;color=#FF9900;Parent=BSGatlas-gene-397,BSGatlas-gene-398;comment="Based on: BSGatlas" basu168 BSGatlas UTR 341441 341491 . + . ID=BSGatlas-5'UTR-205;Parent=BSGatlas-transcript-354,BSGatlas-transcript-355;comment="5'UTR" basu168 BSGatlas gene 341492 342466 . + . ID=BSGatlas-gene-397;color=#1E90FF;Name=ycgK;locus_tag=BSU_03170,BSU03170 basu168 BSGatlas CDS 341492 342466 . + 0 ID=BSGatlas-gene-397_transcribed;color=#1E90FF;Name=ycgK;Parent=BSGatlas-transcript-354,BSGatlas-transcript-355;comment="putative transcriptional regulator (LysRfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ycgK";derives_from=BSGatlas-gene-397 basu168 BSGatlas UTR 342467 342537 . + . ID=BSGatlas-internal_UTR-138;Parent=BSGatlas-transcript-354,BSGatlas-transcript-355;comment="internal_UTR" basu168 BSGatlas transcript 342538 344360 . + . ID=BSGatlas-transcript-357;color=#FF9900;Parent=BSGatlas-gene-398,BSGatlas-gene-399;comment="Based on: BSGatlas" basu168 BSGatlas transcript 342538 343543 . + . ID=BSGatlas-transcript-356;color=#FF9900;Parent=BSGatlas-gene-398;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 342538 343494 . + . ID=BSGatlas-gene-398;color=#1E90FF;Name=cah;locus_tag=BSU_03180,BSU03180 basu168 BSGatlas CDS 342538 343494 . + 0 ID=BSGatlas-gene-398_transcribed;color=#1E90FF;Name=cah;Parent=BSGatlas-transcript-354,BSGatlas-transcript-355,BSGatlas-transcript-356,BSGatlas-transcript-357;comment="promiscuous acetyl xylan esterase-cephalosporinC deacetylase";ec="3.1.1.41,3.1.1.41;3.1.1.72";go="GO:0000272 polysaccharide catabolic process,GO:0005737 cytoplasm,GO:0005975 carbohydrate metabolic process,GO:0016787 hydrolase activity,GO:0030245 cellulose catabolic process,GO:0046555 acetylxylan esterase activity,GO:0047739 cephalosporin-C deacetylase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Penicillin and cephalosporin biosynthesis (ko00311)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics";synonyms="cah";derives_from=BSGatlas-gene-398 basu168 BSGatlas UTR 343495 343577 . + . ID=BSGatlas-internal_UTR-139;Parent=BSGatlas-transcript-355,BSGatlas-transcript-357;comment="internal_UTR" basu168 BSGatlas UTR 343495 343543 . + . ID=BSGatlas-3'UTR-112;Parent=BSGatlas-transcript-354,BSGatlas-transcript-356;comment="3'UTR" basu168 BSGatlas gene 343578 344360 . + . ID=BSGatlas-gene-399;color=#1E90FF;Name=ycgL;locus_tag=BSU_03190,BSU03190 basu168 BSGatlas transcript 343578 344360 . + . ID=BSGatlas-transcript-358;color=#FF9900;Parent=BSGatlas-gene-399;comment="Based on: BSGatlas" basu168 BSGatlas CDS 343578 344360 . + 0 ID=BSGatlas-gene-399_transcribed;color=#1E90FF;Name=ycgL;Parent=BSGatlas-transcript-355,BSGatlas-transcript-357,BSGatlas-transcript-358;comment="conserved protein of unknown function";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="ycgL";derives_from=BSGatlas-gene-399 basu168 BSGatlas transcript 344499 348571 . + . ID=BSGatlas-transcript-360;color=#FF9900;Parent=BSGatlas-gene-400,BSGatlas-gene-401,BSGatlas-gene-402;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 344499 347065 . + . ID=BSGatlas-transcript-359;color=#FF9900;Parent=BSGatlas-gene-400,BSGatlas-gene-401;comment="Based on: BsubCyc" basu168 BSGatlas UTR 344499 344550 . + . ID=BSGatlas-5'UTR-206;Parent=BSGatlas-transcript-359,BSGatlas-transcript-360;comment="5'UTR" basu168 BSGatlas gene 344551 345462 . + . ID=BSGatlas-gene-400;color=#1E90FF;Name=putB;locus_tag=BSU_03200,BSU03200 basu168 BSGatlas CDS 344551 345462 . + 0 ID=BSGatlas-gene-400_transcribed;color=#1E90FF;Name=putB;Parent=BSGatlas-transcript-359,BSGatlas-transcript-360;comment="proline oxidase";ec="1.5.5.2,1.5.99.8,EC-1.5.5.2";go="GO:0004657 proline dehydrogenase activity,GO:0006537 glutamate biosynthetic process,GO:0006560 proline metabolic process,GO:0006562 proline catabolic process,GO:0010133 proline catabolic process to glutamate,GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";kegg_pathways="Arginine and proline metabolism (ko00330),Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.2 Utilization of proline";synonyms="putB,ycgM";derives_from=BSGatlas-gene-400 basu168 BSGatlas UTR 345463 345478 . + . ID=BSGatlas-internal_UTR-140;Parent=BSGatlas-transcript-359,BSGatlas-transcript-360;comment="internal_UTR" basu168 BSGatlas gene 345479 347026 . + . ID=BSGatlas-gene-401;color=#1E90FF;Name=putC;locus_tag=BSU_03210,BSU03210 basu168 BSGatlas CDS 345479 347026 . + 0 ID=BSGatlas-gene-401_transcribed;color=#1E90FF;Name=putC;Parent=BSGatlas-transcript-359,BSGatlas-transcript-360;comment="1-pyrroline-5-carboxylate dehydrogenase";ec="1.2.1.88,1.5.1.12";go="GO:0003842 1-pyrroline-5-carboxylate dehydrogenase activity,GO:0006537 glutamate biosynthetic process,GO:0006561 proline biosynthetic process,GO:0008152 metabolic process,GO:0010133 proline catabolic process to glutamate,GO:0016491 oxidoreductase activity,GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor,GO:0055114 oxidation-reduction process";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Arginine and proline metabolism (ko00330),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.2 Utilization of proline";synonyms="putC,ycgN";derives_from=BSGatlas-gene-401 basu168 BSGatlas transcript 346478 348571 . + . ID=BSGatlas-transcript-361;color=#FF9900;Parent=BSGatlas-gene-402;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 346478 347149 . + . ID=BSGatlas-5'UTR-207;Parent=BSGatlas-transcript-361;comment="5'UTR" basu168 BSGatlas transcript 346589 348571 . + . ID=BSGatlas-transcript-362;color=#FF9900;Parent=BSGatlas-gene-402;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 346589 347149 . + . ID=BSGatlas-5'UTR-208;Parent=BSGatlas-transcript-362;comment="5'UTR" basu168 BSGatlas UTR 347027 347149 . + . ID=BSGatlas-internal_UTR-141;Parent=BSGatlas-transcript-360;comment="internal_UTR" basu168 BSGatlas UTR 347027 347065 . + . ID=BSGatlas-3'UTR-113;Parent=BSGatlas-transcript-359;comment="3'UTR" basu168 BSGatlas transcript 347029 348571 . + . ID=BSGatlas-transcript-363;color=#FF9900;Parent=BSGatlas-gene-402;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 347029 347149 . + . ID=BSGatlas-5'UTR-209;Parent=BSGatlas-transcript-363;comment="5'UTR" basu168 BSGatlas gene 347150 348571 . + . ID=BSGatlas-gene-402;color=#1E90FF;Name=putP;locus_tag=BSU_03220,BSU03220 basu168 BSGatlas CDS 347150 348571 . + 0 ID=BSGatlas-gene-402_transcribed;color=#1E90FF;Name=putP;Parent=BSGatlas-transcript-360,BSGatlas-transcript-361,BSGatlas-transcript-362,BSGatlas-transcript-363;comment="proline permease";go="GO:0005215 transporter activity,GO:0005298 proline:sodium symporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006814 sodium ion transport,GO:0015293 symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0031402 sodium ion binding,GO:0035524 proline transmembrane transport,GO:0035725 sodium ion transmembrane transport,GO:0055085 transmembrane transport,GO:1902475 L-alpha-amino acid transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.1 Solute:sodium symporter family,SW 1.2.4.1.7 Sodium-solute symporter,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.2 Biosynthesis/ acquisition of proline,SW 2.3.2 Utilization of amino acids,SW 2.3.2.2 Utilization of proline,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="putP,ycgO";derives_from=BSGatlas-gene-402 basu168 BSGatlas gene 347670 349525 . - . ID=BSGatlas-gene-403;color=#8F1D1D;Name=S117;locus_tag=new_347670_349525_c basu168 BSGatlas transcript 347670 349525 . - . ID=BSGatlas-transcript-364;color=#B37924;Parent=BSGatlas-gene-403;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 347670 349525 . - . ID=BSGatlas-gene-403_transcribed;color=#8F1D1D;Name=S117;Parent=BSGatlas-transcript-364;synonyms="S117";derives_from=BSGatlas-gene-403 basu168 BSGatlas transcript 348694 349959 . + . ID=BSGatlas-transcript-365;color=#FF9900;Parent=BSGatlas-gene-404;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 348694 348723 . + . ID=BSGatlas-5'UTR-210;Parent=BSGatlas-transcript-365;comment="5'UTR" basu168 BSGatlas gene 348724 349959 . + . ID=BSGatlas-gene-404;color=#1E90FF;Name=putR;locus_tag=BSU_03230,BSU03230 basu168 BSGatlas CDS 348724 349959 . + 0 ID=BSGatlas-gene-404_transcribed;color=#1E90FF;Name=putR;Parent=BSGatlas-transcript-365;comment="transcriptional activator of proline degradationoperon";go="GO:0001140 transcriptional activator activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding,GO:0016597 amino acid binding,GO:2000144 positive regulation of DNA-templated transcription, initiation,GO:2000216 positive regulation of proline metabolic process";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.2 Utilization of proline,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="prcR,putR,ycgP";derives_from=BSGatlas-gene-404 basu168 BSGatlas transcript 349921 352803 . - . ID=BSGatlas-transcript-368;color=#B37924;Parent=BSGatlas-gene-407,BSGatlas-gene-406,BSGatlas-gene-405;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 349921 352735 . - . ID=BSGatlas-transcript-367;color=#B37924;Parent=BSGatlas-gene-407,BSGatlas-gene-406,BSGatlas-gene-405;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 349921 351794 . - . ID=BSGatlas-transcript-366;color=#B37924;Parent=BSGatlas-gene-406,BSGatlas-gene-405;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 349921 349995 . - . ID=BSGatlas-3'UTR-114;Parent=BSGatlas-transcript-366,BSGatlas-transcript-367,BSGatlas-transcript-368;comment="3'UTR" basu168 BSGatlas transcript 349996 352803 . - . ID=BSGatlas-transcript-371;color=#B37924;Parent=BSGatlas-gene-407,BSGatlas-gene-406,BSGatlas-gene-405;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 349996 352735 . - . ID=BSGatlas-transcript-370;color=#B37924;Parent=BSGatlas-gene-407,BSGatlas-gene-406,BSGatlas-gene-405;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 349996 351794 . - . ID=BSGatlas-transcript-369;color=#B37924;Parent=BSGatlas-gene-406,BSGatlas-gene-405;comment="Based on: SubtiWiki" basu168 BSGatlas gene 349996 350853 . - . ID=BSGatlas-gene-405;color=#3474B3;Name=ycgQ;locus_tag=BSU_03240,BSU03240 basu168 BSGatlas CDS 349996 350853 . - 0 ID=BSGatlas-gene-405_transcribed;color=#3474B3;Name=ycgQ;Parent=BSGatlas-transcript-366,BSGatlas-transcript-367,BSGatlas-transcript-368,BSGatlas-transcript-369,BSGatlas-transcript-370,BSGatlas-transcript-371;comment="conserved protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycgQ";derives_from=BSGatlas-gene-405 basu168 BSGatlas gene 350858 351742 . - . ID=BSGatlas-gene-406;color=#3474B3;Name=ycgR;locus_tag=BSU_03250,BSU03250 basu168 BSGatlas CDS 350858 351742 . - 0 ID=BSGatlas-gene-406_transcribed;color=#3474B3;Name=ycgR;Parent=BSGatlas-transcript-366,BSGatlas-transcript-367,BSGatlas-transcript-368,BSGatlas-transcript-369,BSGatlas-transcript-370,BSGatlas-transcript-371;comment="putative permease";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycgR";derives_from=BSGatlas-gene-406 basu168 BSGatlas UTR 351743 351841 . - . ID=BSGatlas-internal_UTR-142;Parent=BSGatlas-transcript-367,BSGatlas-transcript-368,BSGatlas-transcript-370,BSGatlas-transcript-371;comment="internal_UTR" basu168 BSGatlas UTR 351743 351794 . - . ID=BSGatlas-5'UTR-211;Parent=BSGatlas-transcript-366,BSGatlas-transcript-369;comment="5'UTR" basu168 BSGatlas gene 351842 352696 . - . ID=BSGatlas-gene-407;color=#3474B3;Name=ycgS;locus_tag=BSU_03260,BSU03260 basu168 BSGatlas CDS 351842 352696 . - 0 ID=BSGatlas-gene-407_transcribed;color=#3474B3;Name=ycgS;Parent=BSGatlas-transcript-367,BSGatlas-transcript-368,BSGatlas-transcript-370,BSGatlas-transcript-371;comment="putative aromatic hydrocarbon hydrolase";ec="3.7.1.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ycgS";derives_from=BSGatlas-gene-407 basu168 BSGatlas UTR 352697 352803 . - . ID=BSGatlas-5'UTR-213;Parent=BSGatlas-transcript-368,BSGatlas-transcript-371;comment="5'UTR" basu168 BSGatlas UTR 352697 352735 . - . ID=BSGatlas-5'UTR-212;Parent=BSGatlas-transcript-367,BSGatlas-transcript-370;comment="5'UTR" basu168 BSGatlas transcript 352794 353929 . + . ID=BSGatlas-transcript-372;color=#FF9900;Parent=BSGatlas-gene-408;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 352794 352857 . + . ID=BSGatlas-5'UTR-214;Parent=BSGatlas-transcript-372;comment="5'UTR" basu168 BSGatlas gene 352858 353868 . + . ID=BSGatlas-gene-408;color=#1E90FF;Name=ycgT;locus_tag=BSU_03270,BSU03270 basu168 BSGatlas CDS 352858 353868 . + 0 ID=BSGatlas-gene-408_transcribed;color=#1E90FF;Name=ycgT;Parent=BSGatlas-transcript-372;comment="Fur-regulated NADPH:ferredoxin oxidoreductase";ec="1.18.1.-;1.8.1.-,EC-1.8.1.9";go="GO:0004324 ferredoxin-NADP+ reductase activity,GO:0016491 oxidoreductase activity,GO:0050660 flavin adenine dinucleotide binding,GO:0050661 NADP binding,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.4 Electron transport/ other/ based on similarity";synonyms="ycgT";derives_from=BSGatlas-gene-408 basu168 BSGatlas transcript 353856 362797 . - . ID=BSGatlas-transcript-375;color=#B37924;Parent=BSGatlas-gene-413,BSGatlas-gene-412,BSGatlas-gene-411,BSGatlas-gene-410,BSGatlas-gene-409;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 353856 358211 . - . ID=BSGatlas-transcript-374;color=#B37924;Parent=BSGatlas-gene-411,BSGatlas-gene-410,BSGatlas-gene-409;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 353856 355732 . - . ID=BSGatlas-transcript-373;color=#B37924;Parent=BSGatlas-gene-410,BSGatlas-gene-409;comment="Based on: BSGatlas" basu168 BSGatlas UTR 353856 353899 . - . ID=BSGatlas-3'UTR-115;Parent=BSGatlas-transcript-373,BSGatlas-transcript-374,BSGatlas-transcript-375;comment="3'UTR" basu168 BSGatlas UTR 353869 353929 . + . ID=BSGatlas-3'UTR-116;Parent=BSGatlas-transcript-372;comment="3'UTR" basu168 BSGatlas gene 353900 355351 . - . ID=BSGatlas-gene-409;color=#3474B3;Name=nasF;locus_tag=BSU_03280,BSU03280 basu168 BSGatlas CDS 353900 355351 . - 0 ID=BSGatlas-gene-409_transcribed;color=#3474B3;Name=nasF;Parent=BSGatlas-transcript-373,BSGatlas-transcript-374,BSGatlas-transcript-375;comment="uroporphyrin-III C-methyltransferase";ec="2.1.1.107";go="GO:0004851 uroporphyrin-III C-methyltransferase activity,GO:0004852 uroporphyrinogen-III synthase activity,GO:0006779 porphyrin-containing compound biosynthetic process,GO:0008152 metabolic process,GO:0008168 methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation,GO:0033014 tetrapyrrole biosynthetic process,GO:0043115 precorrin-2 dehydrogenase activity,GO:0055114 oxidation-reduction process";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Porphyrin and chlorophyll metabolism (ko00860)";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.2 Respiration,SW 2.1.2.2 Anaerobic respiration,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.1 Utilization of nitrate/ nitrite";synonyms="nasBE,nasF";derives_from=BSGatlas-gene-409 basu168 BSGatlas UTR 355352 355411 . - . ID=BSGatlas-internal_UTR-143;Parent=BSGatlas-transcript-373,BSGatlas-transcript-374,BSGatlas-transcript-375;comment="internal_UTR" basu168 BSGatlas gene 355412 355732 . - . ID=BSGatlas-gene-410;color=#3474B3;Name=nasE;locus_tag=BSU_03290,BSU03290 basu168 BSGatlas CDS 355412 355732 . - 0 ID=BSGatlas-gene-410_transcribed;color=#3474B3;Name=nasE;Parent=BSGatlas-transcript-373,BSGatlas-transcript-374,BSGatlas-transcript-375;comment="assimilatory nitrite reductase subunit";ec="1.7.1.4";go="GO:0005737 cytoplasm,GO:0008942 nitrite reductase [NAD(P)H] activity,GO:0016491 oxidoreductase activity,GO:0042128 nitrate assimilation,GO:0046872 metal ion binding,GO:0051536 iron-sulfur cluster binding,GO:0051537 2 iron, 2 sulfur cluster binding,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Nitrogen metabolism (ko00910)";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.2 Respiration,SW 2.1.2.2 Anaerobic respiration,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.1 Utilization of nitrate/ nitrite";synonyms="nasBD,nasE,nirD";derives_from=BSGatlas-gene-410 basu168 BSGatlas UTR 355733 355763 . - . ID=BSGatlas-internal_UTR-144;Parent=BSGatlas-transcript-374,BSGatlas-transcript-375;comment="internal_UTR" basu168 BSGatlas gene 355764 358181 . - . ID=BSGatlas-gene-411;color=#3474B3;Name=nasD;locus_tag=BSU_03300,BSU03300 basu168 BSGatlas CDS 355764 358181 . - 0 ID=BSGatlas-gene-411_transcribed;color=#3474B3;Name=nasD;Parent=BSGatlas-transcript-374,BSGatlas-transcript-375;comment="assimilatory nitrite reductase subunit";ec="1.7.1.4";go="GO:0008942 nitrite reductase [NAD(P)H] activity,GO:0016491 oxidoreductase activity,GO:0020037 heme binding,GO:0042128 nitrate assimilation,GO:0046872 metal ion binding,GO:0050660 flavin adenine dinucleotide binding,GO:0050661 NADP binding,GO:0051536 iron-sulfur cluster binding,GO:0051539 4 iron, 4 sulfur cluster binding,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Nitrogen metabolism (ko00910)";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.2 Respiration,SW 2.1.2.2 Anaerobic respiration,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.1 Utilization of nitrate/ nitrite";synonyms="nasBC,nasD,nirB";derives_from=BSGatlas-gene-411 basu168 BSGatlas UTR 358182 358302 . - . ID=BSGatlas-internal_UTR-145;Parent=BSGatlas-transcript-375;comment="internal_UTR" basu168 BSGatlas UTR 358182 358211 . - . ID=BSGatlas-5'UTR-215;Parent=BSGatlas-transcript-374;comment="5'UTR" basu168 BSGatlas gene 358303 360435 . - . ID=BSGatlas-gene-412;color=#3474B3;Name=nasC;locus_tag=BSU_03310,BSU03310 basu168 BSGatlas CDS 358303 360435 . - 0 ID=BSGatlas-gene-412_transcribed;color=#3474B3;Name=nasC;Parent=BSGatlas-transcript-375;comment="assimilatory nitrate reductase (catalyticsubunit)";ec="1.7.99.4";go="GO:0008940 nitrate reductase activity,GO:0009055 electron transfer activity,GO:0016491 oxidoreductase activity,GO:0016651 oxidoreductase activity, acting on NAD(P)H,GO:0019333 denitrification pathway,GO:0030151 molybdenum ion binding,GO:0042128 nitrate assimilation,GO:0045333 cellular respiration,GO:0046872 metal ion binding,GO:0051536 iron-sulfur cluster binding,GO:0051539 4 iron, 4 sulfur cluster binding,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Nitrogen metabolism (ko00910)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.1 Utilization of nitrate/ nitrite";synonyms="narB,nasBB,nasC";derives_from=BSGatlas-gene-412 basu168 BSGatlas gene 360442 362757 . - . ID=BSGatlas-gene-413;color=#3474B3;Name=nasB;locus_tag=BSU_03320,BSU03320 basu168 BSGatlas CDS 360442 362757 . - 0 ID=BSGatlas-gene-413_transcribed;color=#3474B3;Name=nasB;Parent=BSGatlas-transcript-375;comment="assimilatory nitrate reductase (electrontransfer subunit NasB)";ec="1.7.1.3";go="GO:0008940 nitrate reductase activity,GO:0008942 nitrite reductase [NAD(P)H] activity,GO:0016491 oxidoreductase activity,GO:0020037 heme binding,GO:0042128 nitrate assimilation,GO:0050660 flavin adenine dinucleotide binding,GO:0050661 NADP binding,GO:0051536 iron-sulfur cluster binding,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Nitrogen metabolism (ko00910)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.1 Utilization of nitrate/ nitrite";synonyms="nasB,nasBA";derives_from=BSGatlas-gene-413 basu168 BSGatlas UTR 362758 362797 . - . ID=BSGatlas-5'UTR-216;Parent=BSGatlas-transcript-375;comment="5'UTR" basu168 BSGatlas transcript 362897 364187 . + . ID=BSGatlas-transcript-376;color=#FF9900;Parent=BSGatlas-gene-414;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 362897 362936 . + . ID=BSGatlas-5'UTR-217;Parent=BSGatlas-transcript-376;comment="5'UTR" basu168 BSGatlas gene 362937 364142 . + . ID=BSGatlas-gene-414;color=#1E90FF;Name=nasA;locus_tag=BSU_03330,BSU03330 basu168 BSGatlas CDS 362937 364142 . + 0 ID=BSGatlas-gene-414_transcribed;color=#1E90FF;Name=nasA;Parent=BSGatlas-transcript-376;comment="putative nitrate transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0015112 nitrate transmembrane transporter activity,GO:0015113 nitrite transmembrane transporter activity,GO:0015706 nitrate transport,GO:0015707 nitrite transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034220 ion transmembrane transport,GO:0042128 nitrate assimilation,GO:0055085 transmembrane transport";kegg_pathways="Nitrogen metabolism (ko00910)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.8 Uptake of other small ions,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.1 Utilization of nitrate/ nitrite,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="nasA";derives_from=BSGatlas-gene-414 basu168 BSGatlas UTR 364143 364187 . + . ID=BSGatlas-3'UTR-117;Parent=BSGatlas-transcript-376;comment="3'UTR" basu168 BSGatlas transcript 364221 367298 . + . ID=BSGatlas-transcript-377;color=#FF9900;Parent=BSGatlas-gene-415,BSGatlas-gene-416,BSGatlas-gene-417,BSGatlas-gene-418;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 364221 364258 . + . ID=BSGatlas-5'UTR-218;Parent=BSGatlas-transcript-377;comment="5'UTR" basu168 BSGatlas gene 364259 365173 . + . ID=BSGatlas-gene-415;color=#1E90FF;Name=folEB;locus_tag=BSU_03340,BSU03340 basu168 BSGatlas CDS 364259 365173 . + 0 ID=BSGatlas-gene-415_transcribed;color=#1E90FF;Name=folEB;Parent=BSGatlas-transcript-377;comment="GTP cyclohydrolase I";ec="3.5.4.16,EC-3.5.4.16";go="GO:0003934 GTP cyclohydrolase I activity,GO:0016787 hydrolase activity,GO:0035998 7,8-dihydroneopterin 3'-triphosphate biosynthetic process";kegg_pathways="Folate biosynthesis (ko00790),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.5 Biosynthesis of folate,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation";synonyms="folE2,folEB,yciA";derives_from=BSGatlas-gene-415 basu168 BSGatlas gene 365170 365754 . + . ID=BSGatlas-gene-416;color=#1E90FF;Name=yciB;locus_tag=BSU_03350,BSU03350 basu168 BSGatlas CDS 365170 365754 . + 0 ID=BSGatlas-gene-416_transcribed;color=#1E90FF;Name=yciB;Parent=BSGatlas-transcript-377;comment="putative Zn(2+)-dependent division lipoprotein(schizosome)";go="GO:0005886 plasma membrane,GO:0008360 regulation of cell shape,GO:0009252 peptidoglycan biosynthetic process,GO:0016020 membrane,GO:0016740 transferase activity,GO:0016757 transferase activity, transferring glycosyl groups,GO:0016787 hydrolase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yciB";derives_from=BSGatlas-gene-416 basu168 BSGatlas UTR 365755 365849 . + . ID=BSGatlas-internal_UTR-146;Parent=BSGatlas-transcript-377;comment="internal_UTR" basu168 BSGatlas transcript 365802 367298 . + . ID=BSGatlas-transcript-378;color=#FF9900;Parent=BSGatlas-gene-417,BSGatlas-gene-418;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 365802 365849 . + . ID=BSGatlas-5'UTR-219;Parent=BSGatlas-transcript-378;comment="5'UTR" basu168 BSGatlas gene 365850 366035 . + . ID=BSGatlas-gene-417;color=#1E90FF;Name=yczL;locus_tag=BSU_03359,BSU03359 basu168 BSGatlas CDS 365850 366035 . + 0 ID=BSGatlas-gene-417_transcribed;color=#1E90FF;Name=yczL;Parent=BSGatlas-transcript-377,BSGatlas-transcript-378;comment="hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yczL";derives_from=BSGatlas-gene-417 basu168 BSGatlas UTR 366036 366062 . + . ID=BSGatlas-internal_UTR-147;Parent=BSGatlas-transcript-377,BSGatlas-transcript-378;comment="internal_UTR" basu168 BSGatlas gene 366063 367256 . + . ID=BSGatlas-gene-418;color=#1E90FF;Name=zagA;locus_tag=BSU_03360,BSU03360 basu168 BSGatlas CDS 366063 367256 . + 0 ID=BSGatlas-gene-418_transcribed;color=#1E90FF;Name=zagA;Parent=BSGatlas-transcript-377,BSGatlas-transcript-378;comment="zinc metallochaperone with NTPase activity";go="GO:0000166 nucleotide binding,GO:0005525 GTP binding,GO:0044459 plasma membrane part";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.3 Zinc,SW 3 Information processing,SW 3.5 Targets of second messengers,SW 3.5.4 Targets of ZTP,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="yciC,zagA";derives_from=BSGatlas-gene-418 basu168 BSGatlas UTR 367257 367298 . + . ID=BSGatlas-3'UTR-118;Parent=BSGatlas-transcript-377,BSGatlas-transcript-378;comment="3'UTR" basu168 BSGatlas transcript 367289 368892 . - . ID=BSGatlas-transcript-379;color=#B37924;Parent=BSGatlas-gene-420,BSGatlas-gene-419;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 367289 367304 . - . ID=BSGatlas-3'UTR-119;Parent=BSGatlas-transcript-379;comment="3'UTR" basu168 BSGatlas gene 367305 367985 . - . ID=BSGatlas-gene-419;color=#3474B3;Name=yckA;locus_tag=BSU_03370,BSU03370 basu168 BSGatlas CDS 367305 367985 . - 0 ID=BSGatlas-gene-419_transcribed;color=#3474B3;Name=yckA;Parent=BSGatlas-transcript-379;comment="aminoacid ABC transporter (permease subunit)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yckA";derives_from=BSGatlas-gene-419 basu168 BSGatlas gene 367995 368858 . - . ID=BSGatlas-gene-420;color=#3474B3;Name=yckB;locus_tag=BSU_03380,BSU03380 basu168 BSGatlas CDS 367995 368858 . - 0 ID=BSGatlas-gene-420_transcribed;color=#3474B3;Name=yckB;Parent=BSGatlas-transcript-379;comment="amino acid ABC transporter (binding lipoproteinsubunit)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0030288 outer membrane-bounded periplasmic space";kegg_pathways="ABC transporters (ko02010),Flagellar assembly (ko02040)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yckB";derives_from=BSGatlas-gene-420 basu168 BSGatlas UTR 368859 368892 . - . ID=BSGatlas-5'UTR-220;Parent=BSGatlas-transcript-379;comment="5'UTR" basu168 BSGatlas transcript 368964 369217 . + . ID=BSGatlas-transcript-380;color=#FF9900;Parent=BSGatlas-gene-421;comment="Based on: BSGatlas" basu168 BSGatlas UTR 368964 369019 . + . ID=BSGatlas-5'UTR-221;Parent=BSGatlas-transcript-380;comment="5'UTR" basu168 BSGatlas gene 369020 369217 . + . ID=BSGatlas-gene-421;color=#1E90FF;locus_tag=BSU_03385 basu168 BSGatlas CDS 369020 369217 . + 0 ID=BSGatlas-gene-421_transcribed;color=#1E90FF;Parent=BSGatlas-transcript-380;comment="hypothetical protein";synonyms="BSU_03385,NA";derives_from=BSGatlas-gene-421 basu168 BSGatlas transcript 369188 369716 . + . ID=BSGatlas-transcript-381;color=#FF9900;Parent=BSGatlas-gene-422;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 369188 369235 . + . ID=BSGatlas-5'UTR-222;Parent=BSGatlas-transcript-381;comment="5'UTR" basu168 BSGatlas gene 369236 369691 . + . ID=BSGatlas-gene-422;color=#1E90FF;Name=yckC;locus_tag=BSU_03390,BSU03390 basu168 BSGatlas CDS 369236 369691 . + 0 ID=BSGatlas-gene-422_transcribed;color=#1E90FF;Name=yckC;Parent=BSGatlas-transcript-381;comment="conserved integral membrane protein of unknownfunction";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yckC";derives_from=BSGatlas-gene-422 basu168 BSGatlas UTR 369692 369716 . + . ID=BSGatlas-3'UTR-120;Parent=BSGatlas-transcript-381;comment="3'UTR" basu168 BSGatlas transcript 369746 370150 . + . ID=BSGatlas-transcript-382;color=#FF9900;Parent=BSGatlas-gene-423;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 369746 369772 . + . ID=BSGatlas-5'UTR-223;Parent=BSGatlas-transcript-382;comment="5'UTR" basu168 BSGatlas gene 369773 370105 . + . ID=BSGatlas-gene-423;color=#1E90FF;Name=yckD;locus_tag=BSU_03400,BSU03400 basu168 BSGatlas CDS 369773 370105 . + 0 ID=BSGatlas-gene-423_transcribed;color=#1E90FF;Name=yckD;Parent=BSGatlas-transcript-382;comment="putative exported protein";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="yckD";derives_from=BSGatlas-gene-423 basu168 BSGatlas UTR 370106 370150 . + . ID=BSGatlas-3'UTR-121;Parent=BSGatlas-transcript-382;comment="3'UTR" basu168 BSGatlas transcript 370218 371736 . + . ID=BSGatlas-transcript-383;color=#FF9900;Parent=BSGatlas-gene-424;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 370218 370258 . + . ID=BSGatlas-5'UTR-224;Parent=BSGatlas-transcript-383;comment="5'UTR" basu168 BSGatlas gene 370259 371692 . + . ID=BSGatlas-gene-424;color=#1E90FF;Name=yckE;locus_tag=BSU_03410,BSU03410 basu168 BSGatlas CDS 370259 371692 . + 0 ID=BSGatlas-gene-424_transcribed;color=#1E90FF;Name=yckE;Parent=BSGatlas-transcript-383;comment="aryl-phospho-beta-d-glucosidase";ec="3.2.1.86,EC-3.2.1.21";go="GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0005975 carbohydrate metabolic process,GO:0008152 metabolic process,GO:0008706 6-phospho-beta-glucosidase activity,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds";kegg_pathways="Glycolysis / Gluconeogenesis (ko00010),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.18 Utilization of beta-glucosides";synonyms="bglC,yckE";derives_from=BSGatlas-gene-424 basu168 BSGatlas transcript 371269 372846 . - . ID=BSGatlas-transcript-386;color=#B37924;Parent=BSGatlas-gene-426,BSGatlas-gene-425;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 371269 372626 . - . ID=BSGatlas-transcript-385;color=#B37924;Parent=BSGatlas-gene-426,BSGatlas-gene-425;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 371269 372164 . - . ID=BSGatlas-transcript-384;color=#B37924;Parent=BSGatlas-gene-425;comment="Based on: BSGatlas" basu168 BSGatlas UTR 371269 371728 . - . ID=BSGatlas-3'UTR-122;Parent=BSGatlas-transcript-384,BSGatlas-transcript-385,BSGatlas-transcript-386;comment="3'UTR" basu168 BSGatlas transcript 371681 372846 . - . ID=BSGatlas-transcript-389;color=#B37924;Parent=BSGatlas-gene-426,BSGatlas-gene-425;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 371681 372626 . - . ID=BSGatlas-transcript-388;color=#B37924;Parent=BSGatlas-gene-426,BSGatlas-gene-425;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 371681 372164 . - . ID=BSGatlas-transcript-387;color=#B37924;Parent=BSGatlas-gene-425;comment="Based on: BSGatlas" basu168 BSGatlas UTR 371681 371728 . - . ID=BSGatlas-3'UTR-123;Parent=BSGatlas-transcript-387,BSGatlas-transcript-388,BSGatlas-transcript-389;comment="3'UTR" basu168 BSGatlas UTR 371693 371736 . + . ID=BSGatlas-3'UTR-124;Parent=BSGatlas-transcript-383;comment="3'UTR" basu168 BSGatlas gene 371729 372127 . - . ID=BSGatlas-gene-425;color=#3474B3;Name=nin;locus_tag=BSU_03420,BSU03420 basu168 BSGatlas CDS 371729 372127 . - 0 ID=BSGatlas-gene-425_transcribed;color=#3474B3;Name=nin;Parent=BSGatlas-transcript-384,BSGatlas-transcript-385,BSGatlas-transcript-386,BSGatlas-transcript-387,BSGatlas-transcript-388,BSGatlas-transcript-389;comment="inhibitor of the DNA degrading activity of NucA(competence)";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0030420 establishment of competence for transformation";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.7 Genetic competence,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.3 Genetic competence,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="comJ,nin";derives_from=BSGatlas-gene-425 basu168 BSGatlas UTR 372128 372164 . - . ID=BSGatlas-5'UTR-225;Parent=BSGatlas-transcript-384,BSGatlas-transcript-387;comment="5'UTR" basu168 BSGatlas UTR 372128 372153 . - . ID=BSGatlas-internal_UTR-148;Parent=BSGatlas-transcript-385,BSGatlas-transcript-386,BSGatlas-transcript-388,BSGatlas-transcript-389;comment="internal_UTR" basu168 BSGatlas gene 372154 372603 . - . ID=BSGatlas-gene-426;color=#3474B3;Name=nucA;locus_tag=BSU_03430,BSU03430 basu168 BSGatlas CDS 372154 372603 . - 0 ID=BSGatlas-gene-426_transcribed;color=#3474B3;Name=nucA;Parent=BSGatlas-transcript-385,BSGatlas-transcript-386,BSGatlas-transcript-388,BSGatlas-transcript-389;comment="endonuclease";go="GO:0004518 nuclease activity,GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016787 hydrolase activity,GO:0030420 establishment of competence for transformation,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.7 Genetic competence,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.3 Genetic competence,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="comI,nucA";derives_from=BSGatlas-gene-426 basu168 BSGatlas UTR 372604 372846 . - . ID=BSGatlas-5'UTR-227;Parent=BSGatlas-transcript-386,BSGatlas-transcript-389;comment="5'UTR" basu168 BSGatlas UTR 372604 372626 . - . ID=BSGatlas-5'UTR-226;Parent=BSGatlas-transcript-385,BSGatlas-transcript-388;comment="5'UTR" basu168 BSGatlas transcript 372771 374531 . - . ID=BSGatlas-transcript-390;color=#B37924;Parent=BSGatlas-gene-427;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 372771 374492 . - . ID=BSGatlas-gene-427;color=#3474B3;Name=tlpC;locus_tag=BSU_03440,BSU03440 basu168 BSGatlas CDS 372771 374492 . - 0 ID=BSGatlas-gene-427_transcribed;color=#3474B3;Name=tlpC;Parent=BSGatlas-transcript-390;comment="methyl-accepting chemotaxis protein (plantcolonization)";go="GO:0004871 NA,GO:0005886 plasma membrane,GO:0006935 chemotaxis,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="Bacterial chemotaxis (ko02030),Two-component system (ko02020)";subtiwiki_category="SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.1 Motility and chemotaxis,SW 4.1.1.1 Signal transduction in motility and chemotaxis,SW 4.1.1.1.4 Membrane-bound chemoreceptors,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tlpC";derives_from=BSGatlas-gene-427 basu168 BSGatlas UTR 374493 374531 . - . ID=BSGatlas-5'UTR-228;Parent=BSGatlas-transcript-390;comment="5'UTR" basu168 BSGatlas transcript 374557 375839 . - . ID=BSGatlas-transcript-391;color=#B37924;Parent=BSGatlas-gene-429,BSGatlas-gene-428;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 374557 374602 . - . ID=BSGatlas-3'UTR-125;Parent=BSGatlas-transcript-391;comment="3'UTR" basu168 BSGatlas gene 374603 375160 . - . ID=BSGatlas-gene-428;color=#3474B3;Name=hxlB;locus_tag=BSU_03450,BSU03450 basu168 BSGatlas CDS 374603 375160 . - 0 ID=BSGatlas-gene-428_transcribed;color=#3474B3;Name=hxlB;Parent=BSGatlas-transcript-391;comment="6-phospho-3-hexuloisomerase (PHI)";ec="5.3.1.27,EC-5.3.1.27";go="GO:0005975 carbohydrate metabolic process,GO:0009636 response to toxic substance,GO:0016853 isomerase activity,GO:0019647 formaldehyde assimilation via ribulose monophosphate cycle,GO:0030246 carbohydrate binding";kegg_pathways="Biosynthesis of amino acids (ko01230),Carbon metabolism (ko01200),Metabolic pathways (ko01100),Methane metabolism (ko00680),Microbial metabolism in diverse environments (ko01120),Pentose phosphate pathway (ko00030)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="hxlB,yckF";derives_from=BSGatlas-gene-428 basu168 BSGatlas gene 375166 375798 . - . ID=BSGatlas-gene-429;color=#3474B3;Name=hxlA;locus_tag=BSU_03460,BSU03460 basu168 BSGatlas CDS 375166 375798 . - 0 ID=BSGatlas-gene-429_transcribed;color=#3474B3;Name=hxlA;Parent=BSGatlas-transcript-391;comment="3-hexulose-6-phosphate synthase (HPS)";ec="4.1.2.43,EC-4.1.2.43";go="GO:0003824 catalytic activity,GO:0004590 orotidine-5'-phosphate decarboxylase activity,GO:0005975 carbohydrate metabolic process,GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process,GO:0006730 one-carbon metabolic process,GO:0008152 metabolic process,GO:0009636 response to toxic substance,GO:0016829 lyase activity,GO:0019647 formaldehyde assimilation via ribulose monophosphate cycle,GO:0043801 hexulose-6-phosphate synthase activity";kegg_pathways="Biosynthesis of amino acids (ko01230),Carbon metabolism (ko01200),Metabolic pathways (ko01100),Methane metabolism (ko00680),Microbial metabolism in diverse environments (ko01120),Pentose phosphate pathway (ko00030)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="hxlA,yckG";derives_from=BSGatlas-gene-429 basu168 BSGatlas UTR 375799 375839 . - . ID=BSGatlas-5'UTR-229;Parent=BSGatlas-transcript-391;comment="5'UTR" basu168 BSGatlas transcript 375946 376430 . + . ID=BSGatlas-transcript-392;color=#FF9900;Parent=BSGatlas-gene-430;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 375946 376031 . + . ID=BSGatlas-5'UTR-230;Parent=BSGatlas-transcript-392;comment="5'UTR" basu168 BSGatlas gene 376032 376394 . + . ID=BSGatlas-gene-430;color=#1E90FF;Name=hxlR;locus_tag=BSU_03470,BSU03470 basu168 BSGatlas CDS 376032 376394 . + 0 ID=BSGatlas-gene-430_transcribed;color=#1E90FF;Name=hxlR;Parent=BSGatlas-transcript-392;comment="positive regulator of hxlAB expression(formaldehyde sensing)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="hxlR,yckH";derives_from=BSGatlas-gene-430 basu168 BSGatlas UTR 376395 376430 . + . ID=BSGatlas-3'UTR-126;Parent=BSGatlas-transcript-392;comment="3'UTR" basu168 BSGatlas transcript 376678 403160 . + . ID=BSGatlas-transcript-394;color=#FF9900;Parent=BSGatlas-gene-432,BSGatlas-gene-433,BSGatlas-gene-434,BSGatlas-gene-435,BSGatlas-gene-436;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 376678 376967 . + . ID=BSGatlas-5'UTR-2843;Parent=BSGatlas-transcript-394;comment="5'UTR" basu168 BSGatlas gene 376968 387731 . + . ID=BSGatlas-gene-432;color=#1E90FF;Name=srfAA;locus_tag=BSU_03480,BSU03480 basu168 BSGatlas CDS 376968 387731 . + 0 ID=BSGatlas-gene-432_transcribed;color=#1E90FF;Name=srfAA;Parent=BSGatlas-transcript-394;comment="surfactin synthetase";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016874 ligase activity,GO:0017000 antibiotic biosynthetic process,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0031177 phosphopantetheine binding";kegg_pathways="Nonribosomal peptide structures (ko01054),Quorum sensing (ko02024)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.6 Miscellaneous metabolic pathways,SW 2.6.6.1 Biosynthesis of antibacterial compounds,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.4 Swarming,SW 4.3 Coping with stress,SW 4.3.15 Biosynthesis of antibacterial compounds,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="comL,srfAA";derives_from=BSGatlas-gene-432 basu168 BSGatlas gene 387744 398495 . + . ID=BSGatlas-gene-433;color=#1E90FF;Name=srfAB;locus_tag=BSU_03490,BSU03490 basu168 BSGatlas CDS 387744 398495 . + 0 ID=BSGatlas-gene-433_transcribed;color=#1E90FF;Name=srfAB;Parent=BSGatlas-transcript-394;comment="surfactin synthetase";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016874 ligase activity,GO:0017000 antibiotic biosynthetic process,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0031177 phosphopantetheine binding";kegg_pathways="Nonribosomal peptide structures (ko01054),Quorum sensing (ko02024)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.6 Miscellaneous metabolic pathways,SW 2.6.6.1 Biosynthesis of antibacterial compounds,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.4 Swarming,SW 4.3 Coping with stress,SW 4.3.15 Biosynthesis of antibacterial compounds,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="comL,srfAB";derives_from=BSGatlas-gene-433 basu168 BSGatlas gene 390880 391020 . + . ID=BSGatlas-gene-434;color=#1E90FF;Name=comS;locus_tag=BSU_03500,BSU03500 basu168 BSGatlas CDS 390880 391020 . + 0 ID=BSGatlas-gene-434_transcribed;color=#1E90FF;Name=comS;Parent=BSGatlas-transcript-394;comment="regulator of genetic competence";go="GO:0030420 establishment of competence for transformation";kegg_pathways="Quorum sensing (ko02024),Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.7 Genetic competence,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.3 Genetic competence,SW 6 Groups of genes,SW 6.8 Short peptides";synonyms="comS";derives_from=BSGatlas-gene-434 basu168 BSGatlas UTR 398496 398531 . + . ID=BSGatlas-internal_UTR-149;Parent=BSGatlas-transcript-394;comment="internal_UTR" basu168 BSGatlas gene 398532 402359 . + . ID=BSGatlas-gene-435;color=#1E90FF;Name=srfAC;locus_tag=BSU_03510,BSU03510 basu168 BSGatlas CDS 398532 402359 . + 0 ID=BSGatlas-gene-435_transcribed;color=#1E90FF;Name=srfAC;Parent=BSGatlas-transcript-394;comment="surfactin synthetase";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0009058 biosynthetic process,GO:0016788 hydrolase activity, acting on ester bonds,GO:0016874 ligase activity,GO:0017000 antibiotic biosynthetic process,GO:0030435 sporulation resulting in formation of a cellular spore";kegg_pathways="Nonribosomal peptide structures (ko01054),Quorum sensing (ko02024)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.6 Miscellaneous metabolic pathways,SW 2.6.6.1 Biosynthesis of antibacterial compounds,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.4 Swarming,SW 4.3 Coping with stress,SW 4.3.15 Biosynthesis of antibacterial compounds,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="comL,srfAC";derives_from=BSGatlas-gene-435 basu168 BSGatlas UTR 402360 402387 . + . ID=BSGatlas-internal_UTR-150;Parent=BSGatlas-transcript-394;comment="internal_UTR" basu168 BSGatlas gene 402388 403116 . + . ID=BSGatlas-gene-436;color=#1E90FF;Name=srfAD;locus_tag=BSU_03520,BSU03520 basu168 BSGatlas CDS 402388 403116 . + 0 ID=BSGatlas-gene-436_transcribed;color=#1E90FF;Name=srfAD;Parent=BSGatlas-transcript-394;comment="surfactin synthetase";go="GO:0005737 cytoplasm,GO:0006950 response to stress,GO:0009058 biosynthetic process,GO:0016787 hydrolase activity,GO:0016788 hydrolase activity, acting on ester bonds,GO:0017000 antibiotic biosynthetic process,GO:0030435 sporulation resulting in formation of a cellular spore";kegg_pathways="Quorum sensing (ko02024)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.6 Miscellaneous metabolic pathways,SW 2.6.6.1 Biosynthesis of antibacterial compounds,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.4 Swarming,SW 4.3 Coping with stress,SW 4.3.15 Biosynthesis of antibacterial compounds";synonyms="comL,srfAD";derives_from=BSGatlas-gene-436 basu168 BSGatlas UTR 403117 403160 . + . ID=BSGatlas-3'UTR-127;Parent=BSGatlas-transcript-394;comment="3'UTR" basu168 BSGatlas transcript 403164 404485 . + . ID=BSGatlas-transcript-395;color=#FF9900;Parent=BSGatlas-gene-437;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 403164 403216 . + . ID=BSGatlas-5'UTR-231;Parent=BSGatlas-transcript-395;comment="5'UTR" basu168 BSGatlas gene 403217 404443 . + . ID=BSGatlas-gene-437;color=#1E90FF;Name=ycxA;locus_tag=BSU_03530,BSU03530 basu168 BSGatlas CDS 403217 404443 . + 0 ID=BSGatlas-gene-437_transcribed;color=#1E90FF;Name=ycxA;Parent=BSGatlas-transcript-395;comment="surfactin exporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 6 Groups of genes,SW 6.11 Efp-dependent proteins,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ycxA";derives_from=BSGatlas-gene-437 basu168 BSGatlas transcript 404431 406053 . - . ID=BSGatlas-transcript-398;color=#B37924;Parent=BSGatlas-gene-439,BSGatlas-gene-438;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 404431 405046 . - . ID=BSGatlas-transcript-397;color=#B37924;Parent=BSGatlas-gene-438;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 404431 405015 . - . ID=BSGatlas-transcript-396;color=#B37924;Parent=BSGatlas-gene-438;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 404431 404457 . - . ID=BSGatlas-3'UTR-128;Parent=BSGatlas-transcript-396,BSGatlas-transcript-397,BSGatlas-transcript-398;comment="3'UTR" basu168 BSGatlas UTR 404444 404485 . + . ID=BSGatlas-3'UTR-129;Parent=BSGatlas-transcript-395;comment="3'UTR" basu168 BSGatlas gene 404458 405015 . - . ID=BSGatlas-gene-438;color=#3474B3;Name=ycxB;locus_tag=BSU_03540,BSU03540 basu168 BSGatlas CDS 404458 405015 . - 0 ID=BSGatlas-gene-438_transcribed;color=#3474B3;Name=ycxB;Parent=BSGatlas-transcript-396,BSGatlas-transcript-397,BSGatlas-transcript-398;comment="hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ycxB";derives_from=BSGatlas-gene-438 basu168 BSGatlas UTR 405016 405068 . - . ID=BSGatlas-internal_UTR-151;Parent=BSGatlas-transcript-398;comment="internal_UTR" basu168 BSGatlas UTR 405016 405046 . - . ID=BSGatlas-5'UTR-232;Parent=BSGatlas-transcript-397;comment="5'UTR" basu168 BSGatlas gene 405069 406007 . - . ID=BSGatlas-gene-439;color=#3474B3;Name=ycxC;locus_tag=BSU_03550,BSU03550 basu168 BSGatlas CDS 405069 406007 . - 0 ID=BSGatlas-gene-439_transcribed;color=#3474B3;Name=ycxC;Parent=BSGatlas-transcript-398;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ycxC";derives_from=BSGatlas-gene-439 basu168 BSGatlas UTR 406008 406053 . - . ID=BSGatlas-5'UTR-233;Parent=BSGatlas-transcript-398;comment="5'UTR" basu168 BSGatlas gene 406131 407465 . + . ID=BSGatlas-gene-440;color=#1E90FF;Name=ycxD;locus_tag=BSU_03560,BSU03560 basu168 BSGatlas transcript 406131 407465 . + . ID=BSGatlas-transcript-399;color=#FF9900;Parent=BSGatlas-gene-440;comment="Based on: BsubCyc" basu168 BSGatlas CDS 406131 407465 . + 0 ID=BSGatlas-gene-440_transcribed;color=#1E90FF;Name=ycxD;Parent=BSGatlas-transcript-399;comment="putative PLP-dependent transcriptionalregulator";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0003824 catalytic activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0008483 transaminase activity,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0030170 pyridoxal phosphate binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ycxD";derives_from=BSGatlas-gene-440 basu168 BSGatlas gene 407460 407627 . - . ID=BSGatlas-gene-441;color=#3474B3;Name=sfp/1;locus_tag=BSU_03569 basu168 BSGatlas CDS 407460 407627 . - 0 ID=BSGatlas-gene-441_transcribed;color=#3474B3;Name=sfp/1;comment="C-terminal part of 4'-phosphopantetheinyltransferase (Surfactin synthetase-activating enzyme)";ec="2.7.8.-";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.6 Miscellaneous metabolic pathways,SW 2.6.6.1 Biosynthesis of antibacterial compounds,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.2 Biofilm formation,SW 4.1.2.5 Other proteins required for biofilm formation,SW 4.3 Coping with stress,SW 4.3.15 Biosynthesis of antibacterial compounds,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="sfp,sfp/1";derives_from=BSGatlas-gene-441 basu168 BSGatlas transcript 407638 408174 . - . ID=BSGatlas-transcript-400;color=#B37924;Parent=BSGatlas-gene-442;comment="Based on: BSGatlas" basu168 BSGatlas gene 407638 408135 . - . ID=BSGatlas-gene-442;color=#3474B3;Name=sfp/2;locus_tag=BSU_03570 basu168 BSGatlas CDS 407638 408135 . - 0 ID=BSGatlas-gene-442_transcribed;color=#3474B3;Name=sfp/2;Parent=BSGatlas-transcript-400;comment="N-terminal part of 4'-phosphopantetheinyltransferase (surfactin synthetase-activating enzyme)";ec="2.7.8.-";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.6 Miscellaneous metabolic pathways,SW 2.6.6.1 Biosynthesis of antibacterial compounds,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.2 Biofilm formation,SW 4.1.2.5 Other proteins required for biofilm formation,SW 4.3 Coping with stress,SW 4.3.15 Biosynthesis of antibacterial compounds,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="sfp,sfp/2";derives_from=BSGatlas-gene-442 basu168 BSGatlas UTR 408136 408174 . - . ID=BSGatlas-5'UTR-234;Parent=BSGatlas-transcript-400;comment="5'UTR" basu168 BSGatlas transcript 408204 408919 . - . ID=BSGatlas-transcript-401;color=#B37924;Parent=BSGatlas-gene-443;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 408204 408239 . - . ID=BSGatlas-3'UTR-130;Parent=BSGatlas-transcript-401;comment="3'UTR" basu168 BSGatlas gene 408240 408887 . - . ID=BSGatlas-gene-443;color=#3474B3;Name=yczE;locus_tag=BSU_03580,BSU03580 basu168 BSGatlas CDS 408240 408887 . - 0 ID=BSGatlas-gene-443_transcribed;color=#3474B3;Name=yczE;Parent=BSGatlas-transcript-401;comment="integral inner membrane protein regulatingantibiotic production";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yczE";derives_from=BSGatlas-gene-443 basu168 BSGatlas UTR 408888 408919 . - . ID=BSGatlas-5'UTR-235;Parent=BSGatlas-transcript-401;comment="5'UTR" basu168 BSGatlas transcript 409122 411523 . - . ID=BSGatlas-transcript-403;color=#B37924;Parent=BSGatlas-gene-446,BSGatlas-gene-445,BSGatlas-gene-444;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 409122 409207 . - . ID=BSGatlas-3'UTR-132;Parent=BSGatlas-transcript-403;comment="3'UTR" basu168 BSGatlas transcript 409208 411523 . - . ID=BSGatlas-transcript-404;color=#B37924;Parent=BSGatlas-gene-446,BSGatlas-gene-445,BSGatlas-gene-444;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 409208 409951 . - . ID=BSGatlas-gene-444;color=#3474B3;Name=tcyC;locus_tag=BSU_03590,BSU03590 basu168 BSGatlas CDS 409208 409951 . - 0 ID=BSGatlas-gene-444_transcribed;color=#3474B3;Name=tcyC;Parent=BSGatlas-transcript-403,BSGatlas-transcript-404;comment="cystine ABC transporter (ATP-binding protein)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.2 Uptake of amino acids,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.9 Biosynthesis/ acquisition of cysteine,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tcyC,yckI";derives_from=BSGatlas-gene-444 basu168 BSGatlas gene 409965 410669 . - . ID=BSGatlas-gene-445;color=#3474B3;Name=tcyB;locus_tag=BSU_03600,BSU03600 basu168 BSGatlas CDS 409965 410669 . - 0 ID=BSGatlas-gene-445_transcribed;color=#3474B3;Name=tcyB;Parent=BSGatlas-transcript-403,BSGatlas-transcript-404;comment="cystine ABC transporter (permease)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.2 Uptake of amino acids,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.9 Biosynthesis/ acquisition of cysteine,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tcyB,yckJ";derives_from=BSGatlas-gene-445 basu168 BSGatlas gene 410656 411462 . - . ID=BSGatlas-gene-446;color=#3474B3;Name=tcyA;locus_tag=BSU_03610,BSU03610 basu168 BSGatlas CDS 410656 411462 . - 0 ID=BSGatlas-gene-446_transcribed;color=#3474B3;Name=tcyA;Parent=BSGatlas-transcript-403,BSGatlas-transcript-404;comment="cystine ABC transporter (substrate-bindinglipoprotein)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0016020 membrane,GO:0030288 outer membrane-bounded periplasmic space";kegg_pathways="ABC transporters (ko02010),Flagellar assembly (ko02040)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.2 Uptake of amino acids,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.9 Biosynthesis/ acquisition of cysteine,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tcyA,yckK";derives_from=BSGatlas-gene-446 basu168 BSGatlas UTR 411463 411523 . - . ID=BSGatlas-5'UTR-236;Parent=BSGatlas-transcript-403,BSGatlas-transcript-404;comment="5'UTR" basu168 BSGatlas transcript 411578 412525 . - . ID=BSGatlas-transcript-406;color=#B37924;Parent=BSGatlas-gene-447;comment="Based on: BSGatlas" basu168 BSGatlas gene 411578 412450 . - . ID=BSGatlas-gene-447;color=#3474B3;Name=bsdA;locus_tag=BSU_03620,BSU03620 basu168 BSGatlas transcript 411578 412450 . - . ID=BSGatlas-transcript-405;color=#B37924;Parent=BSGatlas-gene-447;comment="Based on: BSGatlas" basu168 BSGatlas CDS 411578 412450 . - 0 ID=BSGatlas-gene-447_transcribed;color=#3474B3;Name=bsdA;Parent=BSGatlas-transcript-405,BSGatlas-transcript-406;comment="HTH-type transcriptional regulator BsdA (LysRfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="bsdA,yclA";derives_from=BSGatlas-gene-447 basu168 BSGatlas UTR 412451 412525 . - . ID=BSGatlas-5'UTR-237;Parent=BSGatlas-transcript-406;comment="5'UTR" basu168 BSGatlas transcript 412540 414822 . + . ID=BSGatlas-transcript-407;color=#FF9900;Parent=BSGatlas-gene-448,BSGatlas-gene-449,BSGatlas-gene-450;comment="Based on: SubtiWiki" basu168 BSGatlas gene 412540 413154 . + . ID=BSGatlas-gene-448;color=#1E90FF;Name=bsdB;locus_tag=BSU_03630,BSU03630 basu168 BSGatlas CDS 412540 413154 . + 0 ID=BSGatlas-gene-448_transcribed;color=#1E90FF;Name=bsdB;Parent=BSGatlas-transcript-407;comment="phenolic acid decarboxylase-flavinprenyltransferase subunit";ec="4.1.1.-;4.1.1.61,EC-4.1.1.98";go="GO:0003824 catalytic activity,GO:0009636 response to toxic substance,GO:0016829 lyase activity,GO:0016831 carboxy-lyase activity,GO:0018799 4-hydroxybenzoate decarboxylase activity,GO:0019439 aromatic compound catabolic process";kegg_pathways="Aminobenzoate degradation (ko00627),Biosynthesis of secondary metabolites (ko01110),Degradation of aromatic compounds (ko01220),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Ubiquinone and other terpenoid-quinone biosynthesis (ko00130)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="bsdB,yclB";derives_from=BSGatlas-gene-448 basu168 BSGatlas gene 413157 414578 . + . ID=BSGatlas-gene-449;color=#1E90FF;Name=bsdC;locus_tag=BSU_03640,BSU03640 basu168 BSGatlas CDS 413157 414578 . + 0 ID=BSGatlas-gene-449_transcribed;color=#1E90FF;Name=bsdC;Parent=BSGatlas-transcript-407;comment="promiscuous phenolic acid decarboxylase subunit;1,4-dihydroxy-2-naphtoate-heptaprenyl diphosphatedecarboxylase";ec="4.1.1.61;4.1.1.-,EC-4.1.1.98";go="GO:0005886 plasma membrane,GO:0006744 ubiquinone biosynthetic process,GO:0009636 response to toxic substance,GO:0010181 FMN binding,GO:0016491 oxidoreductase activity,GO:0016829 lyase activity,GO:0016831 carboxy-lyase activity,GO:0018799 4-hydroxybenzoate decarboxylase activity,GO:0019439 aromatic compound catabolic process,GO:0055114 oxidation-reduction process";kegg_pathways="Aminobenzoate degradation (ko00627),Degradation of aromatic compounds (ko01220),Microbial metabolism in diverse environments (ko01120)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="bsdC,yclC";derives_from=BSGatlas-gene-449 basu168 BSGatlas UTR 414579 414594 . + . ID=BSGatlas-internal_UTR-152;Parent=BSGatlas-transcript-407;comment="internal_UTR" basu168 BSGatlas gene 414595 414822 . + . ID=BSGatlas-gene-450;color=#1E90FF;Name=bsdD;locus_tag=BSU_03651,BSU03651 basu168 BSGatlas CDS 414595 414822 . + 0 ID=BSGatlas-gene-450_transcribed;color=#1E90FF;Name=bsdD;Parent=BSGatlas-transcript-407;comment="phenolic acid decarboxylase subunit";ec="4.1.1.91;4.1.1.-;4.1.1.61";go="GO:0009636 response to toxic substance,GO:0016829 lyase activity,GO:0016831 carboxy-lyase activity,GO:0018799 4-hydroxybenzoate decarboxylase activity,GO:0019439 aromatic compound catabolic process";kegg_pathways="Aminobenzoate degradation (ko00627),Degradation of aromatic compounds (ko01220),Microbial metabolism in diverse environments (ko01120)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="bsdD";derives_from=BSGatlas-gene-450 basu168 BSGatlas gene 414819 415283 . + . ID=BSGatlas-gene-451;color=#1E90FF;Name=yclD;locus_tag=BSU_03652,BSU03652 basu168 BSGatlas transcript 414819 415283 . + . ID=BSGatlas-transcript-408;color=#FF9900;Parent=BSGatlas-gene-451;comment="Based on: BSGatlas" basu168 BSGatlas CDS 414819 415283 . + 0 ID=BSGatlas-gene-451_transcribed;color=#1E90FF;Name=yclD;Parent=BSGatlas-transcript-408;comment="putative FMN-binding enzyme subunit";go="GO:0010181 FMN binding,GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="yclD";derives_from=BSGatlas-gene-451 basu168 BSGatlas transcript 415291 416242 . + . ID=BSGatlas-transcript-409;color=#FF9900;Parent=BSGatlas-gene-452;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 415291 415349 . + . ID=BSGatlas-5'UTR-238;Parent=BSGatlas-transcript-409;comment="5'UTR" basu168 BSGatlas gene 415350 416195 . + . ID=BSGatlas-gene-452;color=#1E90FF;Name=yclE;locus_tag=BSU_03660,BSU03660 basu168 BSGatlas CDS 415350 416195 . + 0 ID=BSGatlas-gene-452_transcribed;color=#1E90FF;Name=yclE;Parent=BSGatlas-transcript-409;comment="putative hydrolase";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yclE";derives_from=BSGatlas-gene-452 basu168 BSGatlas transcript 416185 418277 . - . ID=BSGatlas-transcript-411;color=#B37924;Parent=BSGatlas-gene-453;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 416185 417761 . - . ID=BSGatlas-transcript-410;color=#B37924;Parent=BSGatlas-gene-453;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 416185 416234 . - . ID=BSGatlas-3'UTR-133;Parent=BSGatlas-transcript-410,BSGatlas-transcript-411;comment="3'UTR" basu168 BSGatlas UTR 416196 416242 . + . ID=BSGatlas-3'UTR-134;Parent=BSGatlas-transcript-409;comment="3'UTR" basu168 BSGatlas gene 416235 417713 . - . ID=BSGatlas-gene-453;color=#3474B3;Name=dtpT;locus_tag=BSU_03670,BSU03670 basu168 BSGatlas CDS 416235 417713 . - 0 ID=BSGatlas-gene-453_transcribed;color=#3474B3;Name=dtpT;Parent=BSGatlas-transcript-410,BSGatlas-transcript-411;comment="di-tripeptide-proton ABC symporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006857 oligopeptide transport,GO:0015197 NA,GO:0015833 peptide transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.2 Peptide transporter,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.4 Utilization of peptides,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="dtpT,yclF";derives_from=BSGatlas-gene-453 basu168 BSGatlas UTR 417714 418277 . - . ID=BSGatlas-5'UTR-240;Parent=BSGatlas-transcript-411;comment="5'UTR" basu168 BSGatlas UTR 417714 417761 . - . ID=BSGatlas-5'UTR-239;Parent=BSGatlas-transcript-410;comment="5'UTR" basu168 BSGatlas transcript 417751 419747 . + . ID=BSGatlas-transcript-412;color=#FF9900;Parent=BSGatlas-gene-454;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 417751 417992 . + . ID=BSGatlas-5'UTR-241;Parent=BSGatlas-transcript-412;comment="5'UTR" basu168 BSGatlas transcript 417954 419747 . + . ID=BSGatlas-transcript-413;color=#FF9900;Parent=BSGatlas-gene-454;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 417954 417992 . + . ID=BSGatlas-5'UTR-242;Parent=BSGatlas-transcript-413;comment="5'UTR" basu168 BSGatlas gene 417993 419747 . + . ID=BSGatlas-gene-454;color=#1E90FF;Name=yclG;locus_tag=BSU_03680,BSU03680 basu168 BSGatlas CDS 417993 419747 . + 0 ID=BSGatlas-gene-454_transcribed;color=#1E90FF;Name=yclG;Parent=BSGatlas-transcript-412,BSGatlas-transcript-413;comment="putative uronase";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="yclG";derives_from=BSGatlas-gene-454 basu168 BSGatlas transcript 419763 420005 . - . ID=BSGatlas-transcript-414;color=#B37924;Parent=BSGatlas-gene-455;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 419763 419984 . - . ID=BSGatlas-gene-455;color=#3474B3;Name=gerKD;locus_tag=BSU_03690,BSU03690 basu168 BSGatlas CDS 419763 419984 . - 0 ID=BSGatlas-gene-455_transcribed;color=#3474B3;Name=gerKD;Parent=BSGatlas-transcript-414;comment="conserved protein of unknown function";go="GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.4 Germination,SW 4.2.4.1 Germinant receptors,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gerKD,yczF";derives_from=BSGatlas-gene-455 basu168 BSGatlas UTR 419985 420005 . - . ID=BSGatlas-5'UTR-243;Parent=BSGatlas-transcript-414;comment="5'UTR" basu168 BSGatlas transcript 420089 424149 . + . ID=BSGatlas-transcript-415;color=#FF9900;Parent=BSGatlas-gene-456,BSGatlas-gene-457,BSGatlas-gene-458;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 420089 420109 . + . ID=BSGatlas-5'UTR-244;Parent=BSGatlas-transcript-415;comment="5'UTR" basu168 BSGatlas gene 420110 421744 . + . ID=BSGatlas-gene-456;color=#1E90FF;Name=gerKA;locus_tag=BSU_03700,BSU03700 basu168 BSGatlas CDS 420110 421744 . + 0 ID=BSGatlas-gene-456_transcribed;color=#1E90FF;Name=gerKA;Parent=BSGatlas-transcript-415;comment="spore germination receptor subunit";go="GO:0005886 plasma membrane,GO:0009847 spore germination,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.4 Germination,SW 4.2.4.1 Germinant receptors,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gerKA";derives_from=BSGatlas-gene-456 basu168 BSGatlas gene 421734 422957 . + . ID=BSGatlas-gene-457;color=#1E90FF;Name=gerKC;locus_tag=BSU_03710,BSU03710 basu168 BSGatlas CDS 421734 422957 . + 0 ID=BSGatlas-gene-457_transcribed;color=#1E90FF;Name=gerKC;Parent=BSGatlas-transcript-415;comment="spore germination receptor subunit";go="GO:0005886 plasma membrane,GO:0009847 spore germination,GO:0016020 membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.4 Germination,SW 4.2.4.1 Germinant receptors,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gerKC";derives_from=BSGatlas-gene-457 basu168 BSGatlas UTR 422958 422981 . + . ID=BSGatlas-internal_UTR-153;Parent=BSGatlas-transcript-415;comment="internal_UTR" basu168 BSGatlas gene 422982 424103 . + . ID=BSGatlas-gene-458;color=#1E90FF;Name=gerKB;locus_tag=BSU_03720,BSU03720 basu168 BSGatlas CDS 422982 424103 . + 0 ID=BSGatlas-gene-458_transcribed;color=#1E90FF;Name=gerKB;Parent=BSGatlas-transcript-415;comment="spore germination receptor subunit";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0009847 spore germination,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.4 Germination,SW 4.2.4.1 Germinant receptors,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gerKB";derives_from=BSGatlas-gene-458 basu168 BSGatlas UTR 424104 424149 . + . ID=BSGatlas-3'UTR-135;Parent=BSGatlas-transcript-415;comment="3'UTR" basu168 BSGatlas transcript 424208 426364 . - . ID=BSGatlas-transcript-416;color=#B37924;Parent=BSGatlas-gene-460,BSGatlas-gene-459;comment="Based on: SubtiWiki" basu168 BSGatlas gene 424208 424888 . - . ID=BSGatlas-gene-459;color=#3474B3;Name=yclH;locus_tag=BSU_03730,BSU03730 basu168 BSGatlas CDS 424208 424888 . - 0 ID=BSGatlas-gene-459_transcribed;color=#3474B3;Name=yclH;Parent=BSGatlas-transcript-416;comment="putative ABC transporter (ATPase component)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.6 Exporters of unknown function,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yclH";derives_from=BSGatlas-gene-459 basu168 BSGatlas gene 424904 426364 . - . ID=BSGatlas-gene-460;color=#3474B3;Name=yclI;locus_tag=BSU_03740,BSU03740 basu168 BSGatlas CDS 424904 426364 . - 0 ID=BSGatlas-gene-460_transcribed;color=#3474B3;Name=yclI;Parent=BSGatlas-transcript-416;comment="putative transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.6 Exporters of unknown function,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yclI";derives_from=BSGatlas-gene-460 basu168 BSGatlas transcript 426537 428668 . + . ID=BSGatlas-transcript-417;color=#FF9900;Parent=BSGatlas-gene-461,BSGatlas-gene-462;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 426537 426576 . + . ID=BSGatlas-5'UTR-245;Parent=BSGatlas-transcript-417;comment="5'UTR" basu168 BSGatlas gene 426577 427260 . + . ID=BSGatlas-gene-461;color=#1E90FF;Name=yclJ;locus_tag=BSU_03750,BSU03750 basu168 BSGatlas CDS 426577 427260 . + 0 ID=BSGatlas-gene-461_transcribed;color=#1E90FF;Name=yclJ;Parent=BSGatlas-transcript-417;comment="two-component response regulator [YclK](possibly involved in arabinogalactan metabolism)";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="yclJ";derives_from=BSGatlas-gene-461 basu168 BSGatlas gene 427247 428668 . + . ID=BSGatlas-gene-462;color=#1E90FF;Name=yclK;locus_tag=BSU_03760,BSU03760 basu168 BSGatlas CDS 427247 428668 . + 0 ID=BSGatlas-gene-462_transcribed;color=#1E90FF;Name=yclK;Parent=BSGatlas-transcript-417;comment="two-component sensor histidine kinase [YclJ]";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0004871 NA,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="yclK";derives_from=BSGatlas-gene-462 basu168 BSGatlas transcript 428799 430131 . + . ID=BSGatlas-transcript-418;color=#FF9900;Parent=BSGatlas-gene-463,BSGatlas-gene-464;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 428799 428830 . + . ID=BSGatlas-5'UTR-246;Parent=BSGatlas-transcript-418;comment="5'UTR" basu168 BSGatlas gene 428831 429979 . + . ID=BSGatlas-gene-463;color=#1E90FF;Name=rapC;locus_tag=BSU_03770,BSU03770 basu168 BSGatlas CDS 428831 429979 . + 0 ID=BSGatlas-gene-463_transcribed;color=#1E90FF;Name=rapC;Parent=BSGatlas-transcript-418;comment="response regulator aspartate phosphatase";go="GO:0004721 phosphoprotein phosphatase activity,GO:0008152 metabolic process,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity";kegg_pathways="Quorum sensing (ko02024)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.7 Genetic competence,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.2 Response regulator aspartate phosphatase,SW 3.4.8 Quorum sensing,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.3 Genetic competence";synonyms="rapC,yclL";derives_from=BSGatlas-gene-463 basu168 BSGatlas transcript 429697 430131 . + . ID=BSGatlas-transcript-420;color=#FF9900;Parent=BSGatlas-gene-464;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 429697 429962 . + . ID=BSGatlas-5'UTR-247;Parent=BSGatlas-transcript-420;comment="5'UTR" basu168 BSGatlas transcript 429880 430131 . + . ID=BSGatlas-transcript-421;color=#FF9900;Parent=BSGatlas-gene-464;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 429880 429962 . + . ID=BSGatlas-5'UTR-248;Parent=BSGatlas-transcript-421;comment="5'UTR" basu168 BSGatlas gene 429963 430085 . + . ID=BSGatlas-gene-464;color=#1E90FF;Name=phrC;locus_tag=BSU_03780,BSU03780 basu168 BSGatlas CDS 429963 430085 . + 0 ID=BSGatlas-gene-464_transcribed;color=#1E90FF;Name=phrC;Parent=BSGatlas-transcript-418,BSGatlas-transcript-420,BSGatlas-transcript-421;comment="secreted regulator of the activity ofphosphatase RapC and competence and sporulationstimulating factor (CSF)";go="GO:0052106 quorum sensing involved in interaction with host";kegg_pathways="Quorum sensing (ko02024)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.7 Genetic competence,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.3 Control of response regulators/ other,SW 3.4.8 Quorum sensing,SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.3 Genetic competence,SW 6 Groups of genes,SW 6.8 Short peptides";synonyms="phrC";derives_from=BSGatlas-gene-464 basu168 BSGatlas UTR 430086 430131 . + . ID=BSGatlas-3'UTR-137;Parent=BSGatlas-transcript-418,BSGatlas-transcript-420,BSGatlas-transcript-421;comment="3'UTR" basu168 BSGatlas transcript 430118 430501 . - . ID=BSGatlas-transcript-422;color=#B37924;Parent=BSGatlas-gene-466,BSGatlas-gene-465;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 430118 430184 . - . ID=BSGatlas-3'UTR-138;Parent=BSGatlas-transcript-422;comment="3'UTR" basu168 BSGatlas gene 430185 430274 . - . ID=BSGatlas-gene-465;color=#3474B3;Name=yczM;locus_tag=BSU_03788,BSU03788 basu168 BSGatlas CDS 430185 430274 . - 0 ID=BSGatlas-gene-465_transcribed;color=#3474B3;Name=yczM;Parent=BSGatlas-transcript-422;comment="putative type I toxin";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.18 Toxins, antitoxins and immunity against toxins/ based on similarity";synonyms="yczM";derives_from=BSGatlas-gene-465 basu168 BSGatlas UTR 430275 430355 . - . ID=BSGatlas-internal_UTR-154;Parent=BSGatlas-transcript-422;comment="internal_UTR" basu168 BSGatlas transcript 430323 430501 . - . ID=BSGatlas-transcript-423;color=#B37924;Parent=BSGatlas-gene-466;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 430323 430355 . - . ID=BSGatlas-3'UTR-139;Parent=BSGatlas-transcript-423;comment="3'UTR" basu168 BSGatlas gene 430356 430469 . - . ID=BSGatlas-gene-466;color=#3474B3;Name=yczN;locus_tag=BSU_03789,BSU03789 basu168 BSGatlas CDS 430356 430469 . - 0 ID=BSGatlas-gene-466_transcribed;color=#3474B3;Name=yczN;Parent=BSGatlas-transcript-422,BSGatlas-transcript-423;comment="putative spore and germination protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.18 Toxins, antitoxins and immunity against toxins/ based on similarity";synonyms="yczN";derives_from=BSGatlas-gene-466 basu168 BSGatlas UTR 430470 430501 . - . ID=BSGatlas-5'UTR-249;Parent=BSGatlas-transcript-422,BSGatlas-transcript-423;comment="5'UTR" basu168 BSGatlas transcript 430575 432039 . - . ID=BSGatlas-transcript-424;color=#B37924;Parent=BSGatlas-gene-467;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 430575 430622 . - . ID=BSGatlas-3'UTR-140;Parent=BSGatlas-transcript-424;comment="3'UTR" basu168 BSGatlas gene 430623 431987 . - . ID=BSGatlas-gene-467;color=#3474B3;Name=thrD;locus_tag=BSU_03790,BSU03790 basu168 BSGatlas CDS 430623 431987 . - 0 ID=BSGatlas-gene-467_transcribed;color=#3474B3;Name=thrD;Parent=BSGatlas-transcript-424;comment="aspartate kinase III";ec="2.7.2.4";go="GO:0000166 nucleotide binding,GO:0004072 aspartate kinase activity,GO:0005524 ATP binding,GO:0008152 metabolic process,GO:0008652 cellular amino acid biosynthetic process,GO:0009085 lysine biosynthetic process,GO:0009088 threonine biosynthetic process,GO:0009089 lysine biosynthetic process via diaminopimelate,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016597 amino acid binding,GO:0016740 transferase activity,GO:0019877 diaminopimelate biosynthetic process,GO:0042803 protein homodimerization activity";kegg_pathways="2-Oxocarboxylic acid metabolism (ko01210),Biosynthesis of amino acids (ko01230),Biosynthesis of secondary metabolites (ko01110),Cysteine and methionine metabolism (ko00270),Glycine serine and threonine metabolism (ko00260),Lysine biosynthesis (ko00300),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Monobactam biosynthesis (ko00261)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.6 Biosynthesis/ acquisition of lysine/ threonine";synonyms="thrD,yclM";derives_from=BSGatlas-gene-467 basu168 BSGatlas UTR 431988 432039 . - . ID=BSGatlas-5'UTR-250;Parent=BSGatlas-transcript-424;comment="5'UTR" basu168 BSGatlas transcript 432210 436038 . + . ID=BSGatlas-transcript-425;color=#FF9900;Parent=BSGatlas-gene-468,BSGatlas-gene-469,BSGatlas-gene-470,BSGatlas-gene-471;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 432210 432371 . + . ID=BSGatlas-5'UTR-251;Parent=BSGatlas-transcript-425;comment="5'UTR" basu168 BSGatlas transcript 432271 436038 . + . ID=BSGatlas-transcript-426;color=#FF9900;Parent=BSGatlas-gene-468,BSGatlas-gene-469,BSGatlas-gene-470,BSGatlas-gene-471;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 432271 432371 . + . ID=BSGatlas-5'UTR-252;Parent=BSGatlas-transcript-426;comment="5'UTR" basu168 BSGatlas gene 432372 433322 . + . ID=BSGatlas-gene-468;color=#1E90FF;Name=fpbN;locus_tag=BSU_03800,BSU03800 basu168 BSGatlas CDS 432372 433322 . + 0 ID=BSGatlas-gene-468_transcribed;color=#1E90FF;Name=fpbN;Parent=BSGatlas-transcript-425,BSGatlas-transcript-426;comment="petrobactin iron-siderophore ABC transporter(permease)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0015344 siderophore uptake transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="fpbN,yclN";derives_from=BSGatlas-gene-468 basu168 BSGatlas gene 433315 434262 . + . ID=BSGatlas-gene-469;color=#1E90FF;Name=fpbO;locus_tag=BSU_03810,BSU03810 basu168 BSGatlas CDS 433315 434262 . + 0 ID=BSGatlas-gene-469_transcribed;color=#1E90FF;Name=fpbO;Parent=BSGatlas-transcript-425,BSGatlas-transcript-426;comment="petrobactin iron-siderophore ABC transporter(permease)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="fpbO,yclO";derives_from=BSGatlas-gene-469 basu168 BSGatlas gene 434256 435014 . + . ID=BSGatlas-gene-470;color=#1E90FF;Name=fpbP;locus_tag=BSU_03820,BSU03820 basu168 BSGatlas CDS 434256 435014 . + 0 ID=BSGatlas-gene-470_transcribed;color=#1E90FF;Name=fpbP;Parent=BSGatlas-transcript-425,BSGatlas-transcript-426;comment="petrobactin iron-siderophore ABC transporter(ATP-binding protein)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0015344 siderophore uptake transmembrane transporter activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="fpbP,yclP";derives_from=BSGatlas-gene-470 basu168 BSGatlas UTR 435015 435035 . + . ID=BSGatlas-internal_UTR-155;Parent=BSGatlas-transcript-425,BSGatlas-transcript-426;comment="internal_UTR" basu168 BSGatlas gene 435036 435989 . + . ID=BSGatlas-gene-471;color=#1E90FF;Name=fpbQ;locus_tag=BSU_03830,BSU03830 basu168 BSGatlas CDS 435036 435989 . + 0 ID=BSGatlas-gene-471_transcribed;color=#1E90FF;Name=fpbQ;Parent=BSGatlas-transcript-425,BSGatlas-transcript-426;comment="petrobactin iron-siderophore ABC transporter(binding lipoprotein)";go="GO:0005576 extracellular region,GO:0006810 transport,GO:0015344 siderophore uptake transmembrane transporter activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.2 Membrane proteins";synonyms="fpbQ,fpiA,yclQ";derives_from=BSGatlas-gene-471 basu168 BSGatlas transcript 435984 438427 . - . ID=BSGatlas-transcript-427;color=#B37924;Parent=BSGatlas-gene-473,BSGatlas-gene-472;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 435984 436035 . - . ID=BSGatlas-3'UTR-141;Parent=BSGatlas-transcript-427;comment="3'UTR" basu168 BSGatlas UTR 435990 436038 . + . ID=BSGatlas-3'UTR-142;Parent=BSGatlas-transcript-425,BSGatlas-transcript-426;comment="3'UTR" basu168 BSGatlas transcript 436036 438427 . - . ID=BSGatlas-transcript-428;color=#B37924;Parent=BSGatlas-gene-473,BSGatlas-gene-472;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 436036 437454 . - . ID=BSGatlas-gene-472;color=#3474B3;Name=ycnB;locus_tag=BSU_03840,BSU03840 basu168 BSGatlas CDS 436036 437454 . - 0 ID=BSGatlas-gene-472_transcribed;color=#3474B3;Name=ycnB;Parent=BSGatlas-transcript-427,BSGatlas-transcript-428;comment="putative efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.11 Other exporters,SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.3 Metabolism of signalling nucleotides,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycnB";derives_from=BSGatlas-gene-472 basu168 BSGatlas UTR 437455 437473 . - . ID=BSGatlas-internal_UTR-156;Parent=BSGatlas-transcript-427,BSGatlas-transcript-428;comment="internal_UTR" basu168 BSGatlas gene 437474 438352 . - . ID=BSGatlas-gene-473;color=#3474B3;Name=ycnC;locus_tag=BSU_03850,BSU03850 basu168 BSGatlas CDS 437474 438352 . - 0 ID=BSGatlas-gene-473_transcribed;color=#3474B3;Name=ycnC;Parent=BSGatlas-transcript-427,BSGatlas-transcript-428;comment="putative transcriptional regulator (TetR/AcrRfamily)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ycnC";derives_from=BSGatlas-gene-473 basu168 BSGatlas UTR 438353 438427 . - . ID=BSGatlas-5'UTR-253;Parent=BSGatlas-transcript-427,BSGatlas-transcript-428;comment="5'UTR" basu168 BSGatlas transcript 438466 440355 . - . ID=BSGatlas-transcript-430;color=#B37924;Parent=BSGatlas-gene-475,BSGatlas-gene-474;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 438466 439629 . - . ID=BSGatlas-transcript-429;color=#B37924;Parent=BSGatlas-gene-475,BSGatlas-gene-474;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 438466 438515 . - . ID=BSGatlas-3'UTR-143;Parent=BSGatlas-transcript-429,BSGatlas-transcript-430;comment="3'UTR" basu168 BSGatlas gene 438516 439265 . - . ID=BSGatlas-gene-474;color=#3474B3;Name=ycnD;locus_tag=BSU_03860,BSU03860 basu168 BSGatlas CDS 438516 439265 . - 0 ID=BSGatlas-gene-474_transcribed;color=#3474B3;Name=ycnD;Parent=BSGatlas-transcript-429,BSGatlas-transcript-430;comment="NADPH-FMN oxidoreductase (nitroreductase)";ec="1.5.1.39;1.6.99.-";go="GO:0009636 response to toxic substance,GO:0016491 oxidoreductase activity,GO:0019439 aromatic compound catabolic process,GO:0052873 FMN reductase (NADPH) activity,GO:0052874 FMN reductase (NADH) activity,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Riboflavin metabolism (ko00740)";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.3 Electron transport/ other";synonyms="ycnD";derives_from=BSGatlas-gene-474 basu168 BSGatlas UTR 439266 439281 . - . ID=BSGatlas-internal_UTR-157;Parent=BSGatlas-transcript-429,BSGatlas-transcript-430;comment="internal_UTR" basu168 BSGatlas gene 439282 439569 . - . ID=BSGatlas-gene-475;color=#3474B3;Name=ycnE;locus_tag=BSU_03870,BSU03870 basu168 BSGatlas CDS 439282 439569 . - 0 ID=BSGatlas-gene-475_transcribed;color=#3474B3;Name=ycnE;Parent=BSGatlas-transcript-429,BSGatlas-transcript-430;comment="putative AI-2 degrading enzyme";go="GO:0004497 monooxygenase activity,GO:0009636 response to toxic substance,GO:0016491 oxidoreductase activity,GO:0019439 aromatic compound catabolic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.7 Proteins of unknown function";synonyms="ycnE";derives_from=BSGatlas-gene-475 basu168 BSGatlas UTR 439570 440355 . - . ID=BSGatlas-5'UTR-255;Parent=BSGatlas-transcript-430;comment="5'UTR" basu168 BSGatlas UTR 439570 439629 . - . ID=BSGatlas-5'UTR-254;Parent=BSGatlas-transcript-429;comment="5'UTR" basu168 BSGatlas transcript 439575 440059 . + . ID=BSGatlas-transcript-431;color=#FF9900;Parent=BSGatlas-gene-476;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 439575 439708 . + . ID=BSGatlas-5'UTR-256;Parent=BSGatlas-transcript-431;comment="5'UTR" basu168 BSGatlas transcript 439686 440059 . + . ID=BSGatlas-transcript-432;color=#FF9900;Parent=BSGatlas-gene-476;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 439686 439708 . + . ID=BSGatlas-5'UTR-257;Parent=BSGatlas-transcript-432;comment="5'UTR" basu168 BSGatlas gene 439709 440023 . + . ID=BSGatlas-gene-476;color=#1E90FF;Name=yczG;locus_tag=BSU_03880,BSU03880 basu168 BSGatlas CDS 439709 440023 . + 0 ID=BSGatlas-gene-476_transcribed;color=#1E90FF;Name=yczG;Parent=BSGatlas-transcript-431,BSGatlas-transcript-432;comment="putative transcriptional regulator (ArsRfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yczG";derives_from=BSGatlas-gene-476 basu168 BSGatlas transcript 439812 441510 . - . ID=BSGatlas-transcript-433;color=#B37924;Parent=BSGatlas-gene-477;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 439812 440024 . - . ID=BSGatlas-3'UTR-144;Parent=BSGatlas-transcript-433;comment="3'UTR" basu168 BSGatlas UTR 440024 440059 . + . ID=BSGatlas-3'UTR-145;Parent=BSGatlas-transcript-431,BSGatlas-transcript-432;comment="3'UTR" basu168 BSGatlas gene 440025 441464 . - . ID=BSGatlas-gene-477;color=#3474B3;Name=gabR;locus_tag=BSU_03890,BSU03890 basu168 BSGatlas CDS 440025 441464 . - 0 ID=BSGatlas-gene-477_transcribed;color=#3474B3;Name=gabR;Parent=BSGatlas-transcript-433;comment="transcriptional regulator (GntR/MocR family)with PLP binding site (GabR-GABA-PLP aldimine)";go="GO:0000984 bacterial-type RNA polymerase regulatory region sequence-specific DNA binding,GO:0000986 bacterial-type proximal promoter sequence-specific DNA binding,GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0003824 catalytic activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0008483 transaminase activity,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0030170 pyridoxal phosphate binding,GO:0042803 protein homodimerization activity,GO:0044374 sequence-specific DNA binding, bending,GO:0045892 negative regulation of transcription, DNA-templated,GO:0045893 positive regulation of transcription, DNA-templated,GO:0051171 regulation of nitrogen compound metabolic process";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.10 Utilization of gamma-amino butyric acid,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="gabR,ycnF";derives_from=BSGatlas-gene-477 basu168 BSGatlas UTR 441465 441510 . - . ID=BSGatlas-5'UTR-258;Parent=BSGatlas-transcript-433;comment="5'UTR" basu168 BSGatlas transcript 441543 444396 . + . ID=BSGatlas-transcript-434;color=#FF9900;Parent=BSGatlas-gene-478,BSGatlas-gene-479;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 441543 441570 . + . ID=BSGatlas-5'UTR-259;Parent=BSGatlas-transcript-434;comment="5'UTR" basu168 BSGatlas gene 441571 442881 . + . ID=BSGatlas-gene-478;color=#1E90FF;Name=gabT;locus_tag=BSU_03900,BSU03900 basu168 BSGatlas CDS 441571 442881 . + 0 ID=BSGatlas-gene-478_transcribed;color=#1E90FF;Name=gabT;Parent=BSGatlas-transcript-434;comment="4-aminobutyrate aminotransferase";ec="2.6.1.19,EC-2.6.1.19";go="GO:0003824 catalytic activity,GO:0003867 4-aminobutyrate transaminase activity,GO:0008483 transaminase activity,GO:0009448 gamma-aminobutyric acid metabolic process,GO:0009450 gamma-aminobutyric acid catabolic process,GO:0016740 transferase activity,GO:0030170 pyridoxal phosphate binding,GO:0047298 (S)-3-amino-2-methylpropionate transaminase activity";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),beta-Alanine metabolism (ko00410),Butanoate metabolism (ko00650),Lysine degradation (ko00310),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Propanoate metabolism (ko00640),Valine leucine and isoleucine degradation (ko00280)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.10 Utilization of gamma-amino butyric acid";synonyms="gabT,ycnG";derives_from=BSGatlas-gene-478 basu168 BSGatlas transcript 442793 444396 . + . ID=BSGatlas-transcript-435;color=#FF9900;Parent=BSGatlas-gene-479;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 442793 442949 . + . ID=BSGatlas-5'UTR-260;Parent=BSGatlas-transcript-435;comment="5'UTR" basu168 BSGatlas UTR 442882 442949 . + . ID=BSGatlas-internal_UTR-158;Parent=BSGatlas-transcript-434;comment="internal_UTR" basu168 BSGatlas transcript 442914 444396 . + . ID=BSGatlas-transcript-436;color=#FF9900;Parent=BSGatlas-gene-479;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 442914 442949 . + . ID=BSGatlas-5'UTR-261;Parent=BSGatlas-transcript-436;comment="5'UTR" basu168 BSGatlas gene 442950 444338 . + . ID=BSGatlas-gene-479;color=#1E90FF;Name=gabD;locus_tag=BSU_03910,BSU03910 basu168 BSGatlas CDS 442950 444338 . + 0 ID=BSGatlas-gene-479_transcribed;color=#1E90FF;Name=gabD;Parent=BSGatlas-transcript-434,BSGatlas-transcript-435,BSGatlas-transcript-436;comment="succinate-semialdehyde dehydrogenase";ec="1.2.1.24,EC-1.2.1.16";go="GO:0000303 response to superoxide,GO:0008152 metabolic process,GO:0009013 succinate-semialdehyde dehydrogenase [NAD(P)+] activity,GO:0009450 gamma-aminobutyric acid catabolic process,GO:0016491 oxidoreductase activity,GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor,GO:0055114 oxidation-reduction process";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Butanoate metabolism (ko00650),Lysine degradation (ko00310),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Nicotinate and nicotinamide metabolism (ko00760),Tyrosine metabolism (ko00350)";subtiwiki_category="SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.10 Utilization of gamma-amino butyric acid,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="gabD,ycnH";derives_from=BSGatlas-gene-479 basu168 BSGatlas UTR 444339 444396 . + . ID=BSGatlas-3'UTR-146;Parent=BSGatlas-transcript-434,BSGatlas-transcript-435,BSGatlas-transcript-436;comment="3'UTR" basu168 BSGatlas transcript 444430 446180 . + . ID=BSGatlas-transcript-438;color=#FF9900;Parent=BSGatlas-gene-480,BSGatlas-gene-481;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 444430 445559 . + . ID=BSGatlas-transcript-437;color=#FF9900;Parent=BSGatlas-gene-480;comment="Based on: BSGatlas" basu168 BSGatlas UTR 444430 444460 . + . ID=BSGatlas-5'UTR-262;Parent=BSGatlas-transcript-437,BSGatlas-transcript-438;comment="5'UTR" basu168 BSGatlas gene 444461 445324 . + . ID=BSGatlas-gene-480;color=#1E90FF;Name=glcU;locus_tag=BSU_03920,BSU03920 basu168 BSGatlas CDS 444461 445324 . + 0 ID=BSGatlas-gene-480_transcribed;color=#1E90FF;Name=glcU;Parent=BSGatlas-transcript-437,BSGatlas-transcript-438;comment="glucose uptake protein";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0015144 carbohydrate transmembrane transporter activity,GO:0015153 rhamnose transmembrane transporter activity,GO:0015762 rhamnose transmembrane transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0034219 carbohydrate transmembrane transport,GO:0035428 NA";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.3 Carbohydrate transporter,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="glcU,ycxE";derives_from=BSGatlas-gene-480 basu168 BSGatlas UTR 445325 445559 . + . ID=BSGatlas-3'UTR-147;Parent=BSGatlas-transcript-437;comment="3'UTR" basu168 BSGatlas UTR 445325 445343 . + . ID=BSGatlas-internal_UTR-159;Parent=BSGatlas-transcript-438;comment="internal_UTR" basu168 BSGatlas transcript 445344 446180 . + . ID=BSGatlas-transcript-439;color=#FF9900;Parent=BSGatlas-gene-481;comment="Based on: BSGatlas" basu168 BSGatlas gene 445344 446129 . + . ID=BSGatlas-gene-481;color=#1E90FF;Name=gdh;locus_tag=BSU_03930,BSU03930 basu168 BSGatlas CDS 445344 446129 . + 0 ID=BSGatlas-gene-481_transcribed;color=#1E90FF;Name=gdh;Parent=BSGatlas-transcript-438,BSGatlas-transcript-439;comment="forespore glucose 1-dehydrogenase";ec="1.1.1.47";go="GO:0008152 metabolic process,GO:0016491 oxidoreductase activity,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0042601 endospore-forming forespore,GO:0047936 glucose 1-dehydrogenase [NAD(P)] activity,GO:0055114 oxidation-reduction process";kegg_pathways="Carbon metabolism (ko01200),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Pentose phosphate pathway (ko00030)";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.4 Germination,SW 4.2.4.2 Additional germination proteins";synonyms="gdh";derives_from=BSGatlas-gene-481 basu168 BSGatlas UTR 446130 446180 . + . ID=BSGatlas-3'UTR-148;Parent=BSGatlas-transcript-438,BSGatlas-transcript-439;comment="3'UTR" basu168 BSGatlas transcript 446174 449070 . - . ID=BSGatlas-transcript-440;color=#B37924;Parent=BSGatlas-gene-484,BSGatlas-gene-483,BSGatlas-gene-482;comment="Based on: SubtiWiki" basu168 BSGatlas gene 446174 446788 . - . ID=BSGatlas-gene-482;color=#3474B3;Name=ycnI;locus_tag=BSU_03940,BSU03940 basu168 BSGatlas CDS 446174 446788 . - 0 ID=BSGatlas-gene-482_transcribed;color=#3474B3;Name=ycnI;Parent=BSGatlas-transcript-440;comment="putative membrane protein involved in copperintake";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ycnI";derives_from=BSGatlas-gene-482 basu168 BSGatlas gene 446801 448426 . - . ID=BSGatlas-gene-483;color=#3474B3;Name=ycnJ;locus_tag=BSU_03950,BSU03950 basu168 BSGatlas CDS 446801 448426 . - 0 ID=BSGatlas-gene-483_transcribed;color=#3474B3;Name=ycnJ;Parent=BSGatlas-transcript-440;comment="copper import permease subunit";go="GO:0005507 copper ion binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006825 copper ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0042597 periplasmic space,GO:0046688 response to copper ion,GO:0046872 metal ion binding";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.5 Metal ion transporter,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.1 Copper,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycnJ";derives_from=BSGatlas-gene-483 basu168 BSGatlas UTR 448427 448460 . - . ID=BSGatlas-internal_UTR-160;Parent=BSGatlas-transcript-440;comment="internal_UTR" basu168 BSGatlas transcript 448461 449070 . - . ID=BSGatlas-transcript-441;color=#B37924;Parent=BSGatlas-gene-484;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas gene 448461 449033 . - . ID=BSGatlas-gene-484;color=#3474B3;Name=ycnK;locus_tag=BSU_03960,BSU03960 basu168 BSGatlas CDS 448461 449033 . - 0 ID=BSGatlas-gene-484_transcribed;color=#3474B3;Name=ycnK;Parent=BSGatlas-transcript-440,BSGatlas-transcript-441;comment="transcriptional regulator of copper intake(CutR-Cu(+))";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0046872 metal ion binding";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.1 Copper,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="ycnK";derives_from=BSGatlas-gene-484 basu168 BSGatlas UTR 449034 449070 . - . ID=BSGatlas-5'UTR-263;Parent=BSGatlas-transcript-440,BSGatlas-transcript-441;comment="5'UTR" basu168 BSGatlas transcript 449167 449577 . + . ID=BSGatlas-transcript-442;color=#FF9900;Parent=BSGatlas-gene-485;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 449167 449197 . + . ID=BSGatlas-5'UTR-264;Parent=BSGatlas-transcript-442;comment="5'UTR" basu168 BSGatlas gene 449198 449551 . + . ID=BSGatlas-gene-485;color=#1E90FF;Name=ycnL;locus_tag=BSU_03970,BSU03970 basu168 BSGatlas CDS 449198 449551 . + 0 ID=BSGatlas-gene-485_transcribed;color=#1E90FF;Name=ycnL;Parent=BSGatlas-transcript-442;comment="putative reductase or disulfide isomerase";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ycnL";derives_from=BSGatlas-gene-485 basu168 BSGatlas UTR 449552 449577 . + . ID=BSGatlas-3'UTR-149;Parent=BSGatlas-transcript-442;comment="3'UTR" basu168 BSGatlas transcript 449641 452783 . + . ID=BSGatlas-transcript-443;color=#FF9900;Parent=BSGatlas-gene-486,BSGatlas-gene-487,BSGatlas-gene-488;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 449641 449723 . + . ID=BSGatlas-5'UTR-265;Parent=BSGatlas-transcript-443;comment="5'UTR" basu168 BSGatlas gene 449724 451160 . + . ID=BSGatlas-gene-486;color=#1E90FF;Name=mtlA;locus_tag=BSU_03981,BSU03981 basu168 BSGatlas CDS 449724 451160 . + 0 ID=BSGatlas-gene-486_transcribed;color=#1E90FF;Name=mtlA;Parent=BSGatlas-transcript-443;comment="phosphotransferase system (PTS)mannitol-specific enzyme IICB component";ec="2.7.1.197,2.7.1.69";go="GO:0005351 carbohydrate:proton symporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015992 NA,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport";kegg_pathways="Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100),Phosphotransferase system (PTS) (ko02060)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.10 Utilization of mannitol,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.4 Control of PRD-type regulators,SW 3.4.3 Trigger enzyme,SW 3.4.3.1 Trigger enzymes of the PTS that control the activity of PRD-containing transcription factors,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="mtlA";derives_from=BSGatlas-gene-486 basu168 BSGatlas UTR 451161 451184 . + . ID=BSGatlas-internal_UTR-161;Parent=BSGatlas-transcript-443;comment="internal_UTR" basu168 BSGatlas gene 451185 451616 . + . ID=BSGatlas-gene-487;color=#1E90FF;Name=mtlF;locus_tag=BSU_03982,BSU03982 basu168 BSGatlas CDS 451185 451616 . + 0 ID=BSGatlas-gene-487_transcribed;color=#1E90FF;Name=mtlF;Parent=BSGatlas-transcript-443;comment="phosphotransferase system (PTS)mannitol-specific enzyme IIA component";ec="2.7.1.197";go="GO:0005215 transporter activity,GO:0005737 cytoplasm,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity";kegg_pathways="Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100),Phosphotransferase system (PTS) (ko02060)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.10 Utilization of mannitol,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="mtlF";derives_from=BSGatlas-gene-487 basu168 BSGatlas gene 451618 452739 . + . ID=BSGatlas-gene-488;color=#1E90FF;Name=mtlD;locus_tag=BSU_03990,BSU03990 basu168 BSGatlas CDS 451618 452739 . + 0 ID=BSGatlas-gene-488_transcribed;color=#1E90FF;Name=mtlD;Parent=BSGatlas-transcript-443;comment="mannitol-1-phosphate 5-dehydrogenase";ec="1.1.1.17,EC-1.1.1.17";go="GO:0003824 catalytic activity,GO:0008926 mannitol-1-phosphate 5-dehydrogenase activity,GO:0016491 oxidoreductase activity,GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,GO:0019594 mannitol metabolic process,GO:0050662 coenzyme binding,GO:0055114 oxidation-reduction process";kegg_pathways="Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.10 Utilization of mannitol";synonyms="mtlB,mtlD";derives_from=BSGatlas-gene-488 basu168 BSGatlas UTR 452740 452783 . + . ID=BSGatlas-3'UTR-150;Parent=BSGatlas-transcript-443;comment="3'UTR" basu168 BSGatlas transcript 452789 453930 . + . ID=BSGatlas-transcript-444;color=#FF9900;Parent=BSGatlas-gene-489;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 452789 452829 . + . ID=BSGatlas-5'UTR-266;Parent=BSGatlas-transcript-444;comment="5'UTR" basu168 BSGatlas gene 452830 453894 . + . ID=BSGatlas-gene-489;color=#1E90FF;Name=ycsA;locus_tag=BSU_04000,BSU04000 basu168 BSGatlas CDS 452830 453894 . + 0 ID=BSGatlas-gene-489_transcribed;color=#1E90FF;Name=ycsA;Parent=BSGatlas-transcript-444;comment="putative tartrate dehydrogenase";ec="1.1.1.93,1.1.1.93;1.1.1.83;4.1.1.73,EC-1.1.1.93";go="GO:0000287 magnesium ion binding,GO:0009027 tartrate dehydrogenase activity,GO:0016491 oxidoreductase activity,GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,GO:0016829 lyase activity,GO:0046553 D-malate dehydrogenase (decarboxylating) activity,GO:0050319 tartrate decarboxylase activity,GO:0051287 NAD binding,GO:0055114 oxidation-reduction process";kegg_pathways="Butanoate metabolism (ko00650),Glyoxylate and dicarboxylate metabolism (ko00630),Metabolic pathways (ko01100)";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ycsA";derives_from=BSGatlas-gene-489 basu168 BSGatlas UTR 453895 453930 . + . ID=BSGatlas-3'UTR-151;Parent=BSGatlas-transcript-444;comment="3'UTR" basu168 BSGatlas transcript 453994 454712 . + . ID=BSGatlas-transcript-446;color=#FF9900;Parent=BSGatlas-gene-490;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 453994 454028 . + . ID=BSGatlas-5'UTR-267;Parent=BSGatlas-transcript-446;comment="5'UTR" basu168 BSGatlas gene 454029 454592 . + . ID=BSGatlas-gene-490;color=#1E90FF;Name=sipU;locus_tag=BSU_04010,BSU04010 basu168 BSGatlas CDS 454029 454592 . + 0 ID=BSGatlas-gene-490_transcribed;color=#1E90FF;Name=sipU;Parent=BSGatlas-transcript-446;comment="type I signal peptidase";ec="3.4.21.89,EC-3.4.21.89";go="GO:0005886 plasma membrane,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008236 serine-type peptidase activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016787 hydrolase activity";kegg_pathways="Protein export (ko03060)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="sipU,ycsB";derives_from=BSGatlas-gene-490 basu168 BSGatlas UTR 454593 454712 . + . ID=BSGatlas-3'UTR-152;Parent=BSGatlas-transcript-446;comment="3'UTR" basu168 BSGatlas transcript 454652 455301 . - . ID=BSGatlas-transcript-447;color=#B37924;Parent=BSGatlas-gene-491;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 454652 455260 . - . ID=BSGatlas-gene-491;color=#3474B3;Name=yczH;locus_tag=BSU_04020,BSU04020 basu168 BSGatlas CDS 454652 455260 . - 0 ID=BSGatlas-gene-491_transcribed;color=#3474B3;Name=yczH;Parent=BSGatlas-transcript-447;comment="putative hydrolase";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yczH";derives_from=BSGatlas-gene-491 basu168 BSGatlas UTR 455261 455301 . - . ID=BSGatlas-5'UTR-268;Parent=BSGatlas-transcript-447;comment="5'UTR" basu168 BSGatlas transcript 455319 455788 . + . ID=BSGatlas-transcript-449;color=#FF9900;Parent=BSGatlas-gene-492;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 455319 455738 . + . ID=BSGatlas-transcript-448;color=#FF9900;Parent=BSGatlas-gene-492;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 455319 455345 . + . ID=BSGatlas-5'UTR-269;Parent=BSGatlas-transcript-448,BSGatlas-transcript-449;comment="5'UTR" basu168 BSGatlas gene 455346 455738 . + . ID=BSGatlas-gene-492;color=#1E90FF;Name=ycsD;locus_tag=BSU_04030,BSU04030 basu168 BSGatlas CDS 455346 455738 . + 0 ID=BSGatlas-gene-492_transcribed;color=#1E90FF;Name=ycsD;Parent=BSGatlas-transcript-448,BSGatlas-transcript-449;comment="putative hydroxyacyl-(acyl carrier protein)dehydratase";ec="4.2.1.-,EC-2.3.1.86;EC-2.3.1.85;EC-4.2.1.59";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.2 Biosynthesis of lipids,SW 2.4.2.1 Biosynthesis of fatty acids";synonyms="ycsD";derives_from=BSGatlas-gene-492 basu168 BSGatlas UTR 455739 455788 . + . ID=BSGatlas-3'UTR-153;Parent=BSGatlas-transcript-449;comment="3'UTR" basu168 BSGatlas transcript 455771 455967 . - . ID=BSGatlas-transcript-450;color=#B37924;Parent=BSGatlas-gene-493;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 455771 455935 . - . ID=BSGatlas-gene-493;color=#3474B3;Name=yczO;locus_tag=BSU_04039,BSU04039 basu168 BSGatlas CDS 455771 455935 . - 0 ID=BSGatlas-gene-493_transcribed;color=#3474B3;Name=yczO;Parent=BSGatlas-transcript-450;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yczO";derives_from=BSGatlas-gene-493 basu168 BSGatlas UTR 455936 455967 . - . ID=BSGatlas-5'UTR-270;Parent=BSGatlas-transcript-450;comment="5'UTR" basu168 BSGatlas transcript 456021 456845 . + . ID=BSGatlas-transcript-452;color=#FF9900;Parent=BSGatlas-gene-494;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 456021 456817 . + . ID=BSGatlas-transcript-451;color=#FF9900;Parent=BSGatlas-gene-494;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 456021 456067 . + . ID=BSGatlas-5'UTR-271;Parent=BSGatlas-transcript-451,BSGatlas-transcript-452;comment="5'UTR" basu168 BSGatlas gene 456068 456817 . + . ID=BSGatlas-gene-494;color=#1E90FF;Name=ycsE;locus_tag=BSU_04040,BSU04040 basu168 BSGatlas CDS 456068 456817 . + 0 ID=BSGatlas-gene-494_transcribed;color=#1E90FF;Name=ycsE;Parent=BSGatlas-transcript-451,BSGatlas-transcript-452;comment="5-amino-6-ribitylamino-2,4(1H,3H)-pyrimidinedione 5'-phosphate phosphatase / 5'nucleotidase";ec="3.1.3.-,EC-3.1.3.104";go="GO:0000287 magnesium ion binding,GO:0003824 catalytic activity,GO:0006812 cation transport,GO:0008152 metabolic process,GO:0009231 riboflavin biosynthetic process,GO:0016021 integral component of membrane,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity,GO:0016791 phosphatase activity,GO:0019829 cation-transporting ATPase activity,GO:0034220 ion transmembrane transport,GO:0043726 5-amino-6-(5-phosphoribitylamino)uracil phosphatase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Riboflavin metabolism (ko00740)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.2 Biosynthesis/ acquisition of riboflavin/ FAD";synonyms="ycsE";derives_from=BSGatlas-gene-494 basu168 BSGatlas UTR 456818 456845 . + . ID=BSGatlas-3'UTR-154;Parent=BSGatlas-transcript-452;comment="3'UTR" basu168 BSGatlas transcript 456926 463111 . + . ID=BSGatlas-transcript-454;color=#FF9900;Parent=BSGatlas-gene-495,BSGatlas-gene-496,BSGatlas-gene-497,BSGatlas-gene-498,BSGatlas-gene-499,BSGatlas-gene-500,BSGatlas-gene-501;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 456926 461107 . + . ID=BSGatlas-transcript-453;color=#FF9900;Parent=BSGatlas-gene-495,BSGatlas-gene-496,BSGatlas-gene-497,BSGatlas-gene-498;comment="Based on: BSGatlas" basu168 BSGatlas UTR 456926 457022 . + . ID=BSGatlas-5'UTR-272;Parent=BSGatlas-transcript-453,BSGatlas-transcript-454;comment="5'UTR" basu168 BSGatlas gene 457023 457796 . + . ID=BSGatlas-gene-495;color=#1E90FF;Name=pxpA;locus_tag=BSU_04050,BSU04050 basu168 BSGatlas CDS 457023 457796 . + 0 ID=BSGatlas-gene-495_transcribed;color=#1E90FF;Name=pxpA;Parent=BSGatlas-transcript-453,BSGatlas-transcript-454;comment="oxoprolinase subunit A";ec="3.5.2.9";go="GO:0003824 catalytic activity,GO:0005975 carbohydrate metabolic process";kegg_pathways="Glutathione metabolism (ko00480),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.7 Detoxification reactions";synonyms="pxpA,ycsF";derives_from=BSGatlas-gene-495 basu168 BSGatlas gene 457811 459025 . + . ID=BSGatlas-gene-496;color=#1E90FF;Name=ycsG;locus_tag=BSU_04060,BSU04060 basu168 BSGatlas CDS 457811 459025 . + 0 ID=BSGatlas-gene-496_transcribed;color=#1E90FF;Name=ycsG;Parent=BSGatlas-transcript-453,BSGatlas-transcript-454;comment="5-oxoproline transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ycsG,ycsH";derives_from=BSGatlas-gene-496 basu168 BSGatlas UTR 459026 459048 . + . ID=BSGatlas-internal_UTR-162;Parent=BSGatlas-transcript-453,BSGatlas-transcript-454;comment="internal_UTR" basu168 BSGatlas gene 459049 459822 . + . ID=BSGatlas-gene-497;color=#1E90FF;Name=ycsI;locus_tag=BSU_04070,BSU04070 basu168 BSGatlas CDS 459049 459822 . + 0 ID=BSGatlas-gene-497_transcribed;color=#1E90FF;Name=ycsI;Parent=BSGatlas-transcript-453,BSGatlas-transcript-454;comment="putative D-5-oxoproline epimerase";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ycsI";derives_from=BSGatlas-gene-497 basu168 BSGatlas UTR 459823 459866 . + . ID=BSGatlas-internal_UTR-163;Parent=BSGatlas-transcript-453,BSGatlas-transcript-454;comment="internal_UTR" basu168 BSGatlas gene 459867 460589 . + . ID=BSGatlas-gene-498;color=#1E90FF;Name=pxpB;locus_tag=BSU_04080,BSU04080 basu168 BSGatlas CDS 459867 460589 . + 0 ID=BSGatlas-gene-498_transcribed;color=#1E90FF;Name=pxpB;Parent=BSGatlas-transcript-453,BSGatlas-transcript-454;comment="L-5-oxoprolinase (ATP-dependent) subunit B";ec="3.5.2.9";go="GO:0000166 nucleotide binding,GO:0000413 protein peptidyl-prolyl isomerization,GO:0003755 peptidyl-prolyl cis-trans isomerase activity,GO:0004860 protein kinase inhibitor activity,GO:0005524 ATP binding,GO:0006457 protein folding,GO:0006469 negative regulation of protein kinase activity,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 2 Metabolism,SW 2.7 Detoxification reactions,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.7 phosphorelay,SW 3.4.7.2 Proteins controlling the activity of the kinases,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay,SW 4.2.2.2 Proteins controlling the activity of the kinases";synonyms="kipI,pxpB,ycsJ";derives_from=BSGatlas-gene-498 basu168 BSGatlas UTR 460590 461107 . + . ID=BSGatlas-3'UTR-155;Parent=BSGatlas-transcript-453;comment="3'UTR" basu168 BSGatlas gene 460592 461599 . + . ID=BSGatlas-gene-499;color=#1E90FF;Name=pxpC;locus_tag=BSU_04090,BSU04090 basu168 BSGatlas CDS 460592 461599 . + 0 ID=BSGatlas-gene-499_transcribed;color=#1E90FF;Name=pxpC;Parent=BSGatlas-transcript-454;comment="L-5-oxoprolinase (ATP-dependent) subunit C";ec="3.5.2.9";go="GO:0000413 protein peptidyl-prolyl isomerization,GO:0003755 peptidyl-prolyl cis-trans isomerase activity,GO:0006457 protein folding,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 2 Metabolism,SW 2.7 Detoxification reactions,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.7 phosphorelay,SW 3.4.7.2 Proteins controlling the activity of the kinases,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay,SW 4.2.2.2 Proteins controlling the activity of the kinases";synonyms="kipA,pxpC";derives_from=BSGatlas-gene-499 basu168 BSGatlas transcript 461239 463111 . + . ID=BSGatlas-transcript-455;color=#FF9900;Parent=BSGatlas-gene-500,BSGatlas-gene-501;comment="Based on: BSGatlas" basu168 BSGatlas UTR 461239 461614 . + . ID=BSGatlas-5'UTR-273;Parent=BSGatlas-transcript-455;comment="5'UTR" basu168 BSGatlas gene 461615 462367 . + . ID=BSGatlas-gene-500;color=#1E90FF;Name=kipR;locus_tag=BSU_04100,BSU04100 basu168 BSGatlas CDS 461615 462367 . + 0 ID=BSGatlas-gene-500_transcribed;color=#1E90FF;Name=kipR;Parent=BSGatlas-transcript-454,BSGatlas-transcript-455;comment="transcriptional regulator of the pxp operon(IclR family)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 3.4.7 phosphorelay,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay";synonyms="kipR,ycsO";derives_from=BSGatlas-gene-500 basu168 BSGatlas UTR 462368 462430 . + . ID=BSGatlas-internal_UTR-164;Parent=BSGatlas-transcript-454,BSGatlas-transcript-455;comment="internal_UTR" basu168 BSGatlas transcript 462398 463111 . + . ID=BSGatlas-transcript-456;color=#FF9900;Parent=BSGatlas-gene-501;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 462398 462430 . + . ID=BSGatlas-5'UTR-274;Parent=BSGatlas-transcript-456;comment="5'UTR" basu168 BSGatlas gene 462431 463072 . + . ID=BSGatlas-gene-501;color=#1E90FF;Name=lipC;locus_tag=BSU_04110,BSU04110 basu168 BSGatlas CDS 462431 463072 . + 0 ID=BSGatlas-gene-501_transcribed;color=#1E90FF;Name=lipC;Parent=BSGatlas-transcript-454,BSGatlas-transcript-455,BSGatlas-transcript-456;comment="spore coat phospholipase B";ec="3.1.1.-";go="GO:0006629 lipid metabolic process,GO:0016787 hydrolase activity,GO:0016788 hydrolase activity, acting on ester bonds,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0031160 spore wall";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.1 Utilization of lipids,SW 2.4.1.1 Utilization of phospholipids,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.5 Class V,SW 4.2.4 Germination,SW 4.2.4.2 Additional germination proteins";synonyms="lipC,ycsK";derives_from=BSGatlas-gene-501 basu168 BSGatlas UTR 463073 463111 . + . ID=BSGatlas-3'UTR-156;Parent=BSGatlas-transcript-454,BSGatlas-transcript-455,BSGatlas-transcript-456;comment="3'UTR" basu168 BSGatlas transcript 463169 463490 . + . ID=BSGatlas-transcript-458;color=#FF9900;Parent=BSGatlas-gene-502;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 463169 463244 . + . ID=BSGatlas-5'UTR-275;Parent=BSGatlas-transcript-458;comment="5'UTR" basu168 BSGatlas gene 463245 463490 . + . ID=BSGatlas-gene-502;color=#1E90FF;Name=yczI;locus_tag=BSU_04120,BSU04120 basu168 BSGatlas CDS 463245 463490 . + 0 ID=BSGatlas-gene-502_transcribed;color=#1E90FF;Name=yczI;Parent=BSGatlas-transcript-458;comment="conserved protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yczI";derives_from=BSGatlas-gene-502 basu168 BSGatlas transcript 463391 463820 . - . ID=BSGatlas-transcript-459;color=#B37924;Parent=BSGatlas-gene-503;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 463391 463495 . - . ID=BSGatlas-3'UTR-158;Parent=BSGatlas-transcript-459;comment="3'UTR" basu168 BSGatlas gene 463496 463783 . - . ID=BSGatlas-gene-503;color=#3474B3;Name=yczJ;locus_tag=BSU_04130,BSU04130 basu168 BSGatlas CDS 463496 463783 . - 0 ID=BSGatlas-gene-503_transcribed;color=#3474B3;Name=yczJ;Parent=BSGatlas-transcript-459;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yczJ";derives_from=BSGatlas-gene-503 basu168 BSGatlas UTR 463784 463820 . - . ID=BSGatlas-5'UTR-276;Parent=BSGatlas-transcript-459;comment="5'UTR" basu168 BSGatlas transcript 463903 466944 . + . ID=BSGatlas-transcript-460;color=#FF9900;Parent=BSGatlas-gene-504,BSGatlas-gene-505;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 463903 463933 . + . ID=BSGatlas-5'UTR-277;Parent=BSGatlas-transcript-460;comment="5'UTR" basu168 BSGatlas gene 463934 465940 . + . ID=BSGatlas-gene-504;color=#1E90FF;Name=pbpC;locus_tag=BSU_04140,BSU04140 basu168 BSGatlas CDS 463934 465940 . + 0 ID=BSGatlas-gene-504_transcribed;color=#1E90FF;Name=pbpC;Parent=BSGatlas-transcript-460;comment="penicillin-binding lipoprotein 3;transpeptidase";go="GO:0005515 protein binding,GO:0005886 plasma membrane,GO:0008360 regulation of cell shape,GO:0008658 penicillin binding,GO:0009252 peptidoglycan biosynthetic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0046677 response to antibiotic";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.7 Penicillin-binding proteins,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="pbpC,ycsM,yzsA";derives_from=BSGatlas-gene-504 basu168 BSGatlas UTR 465941 466041 . + . ID=BSGatlas-internal_UTR-165;Parent=BSGatlas-transcript-460;comment="internal_UTR" basu168 BSGatlas gene 466042 466944 . + . ID=BSGatlas-gene-505;color=#1E90FF;Name=ycsN;locus_tag=BSU_04150,BSU04150 basu168 BSGatlas CDS 466042 466944 . + 0 ID=BSGatlas-gene-505_transcribed;color=#1E90FF;Name=ycsN;Parent=BSGatlas-transcript-460;comment="putative oxidoreductase";ec="1.1.1.-";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ycsN";derives_from=BSGatlas-gene-505 basu168 BSGatlas transcript 467042 469263 . + . ID=BSGatlas-transcript-461;color=#FF9900;Parent=BSGatlas-gene-506;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 467042 467129 . + . ID=BSGatlas-5'UTR-278;Parent=BSGatlas-transcript-461;comment="5'UTR" basu168 BSGatlas gene 467130 469214 . + . ID=BSGatlas-gene-506;color=#1E90FF;Name=mtlR;locus_tag=BSU_04160,BSU04160 basu168 BSGatlas CDS 467130 469214 . + 0 ID=BSGatlas-gene-506_transcribed;color=#1E90FF;Name=mtlR;Parent=BSGatlas-transcript-461;comment="transcriptional regulator, PTS-dependentactivator";go="GO:0003677 DNA binding,GO:0005215 transporter activity,GO:0005351 carbohydrate:proton symporter activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0006810 transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015992 NA,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.10 Utilization of mannitol,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.3 PRD-type regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue";synonyms="mtlR,ydaA";derives_from=BSGatlas-gene-506 basu168 BSGatlas UTR 469215 469263 . + . ID=BSGatlas-3'UTR-159;Parent=BSGatlas-transcript-461;comment="3'UTR" basu168 BSGatlas transcript 469275 470937 . + . ID=BSGatlas-transcript-462;color=#FF9900;Parent=BSGatlas-gene-507;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 469275 469425 . + . ID=BSGatlas-5'UTR-279;Parent=BSGatlas-transcript-462;comment="5'UTR" basu168 BSGatlas transcript 469369 470937 . + . ID=BSGatlas-transcript-463;color=#FF9900;Parent=BSGatlas-gene-507;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 469369 469425 . + . ID=BSGatlas-5'UTR-280;Parent=BSGatlas-transcript-463;comment="5'UTR" basu168 BSGatlas gene 469426 470937 . + . ID=BSGatlas-gene-507;color=#1E90FF;Name=ydaB;locus_tag=BSU_04170,BSU04170 basu168 BSGatlas CDS 469426 470937 . + 0 ID=BSGatlas-gene-507_transcribed;color=#1E90FF;Name=ydaB;Parent=BSGatlas-transcript-462,BSGatlas-transcript-463;comment="putative acyl-CoA ligase";ec="6.2.1.-,EC-6.2.1.3";go="GO:0000166 nucleotide binding,GO:0003824 catalytic activity,GO:0005524 ATP binding,GO:0008152 metabolic process,GO:0016874 ligase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydaB";derives_from=BSGatlas-gene-507 basu168 BSGatlas transcript 470957 471583 . - . ID=BSGatlas-transcript-464;color=#B37924;Parent=BSGatlas-gene-508;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 470957 471502 . - . ID=BSGatlas-gene-508;color=#3474B3;Name=ydaC;locus_tag=BSU_04180,BSU04180 basu168 BSGatlas CDS 470957 471502 . - 0 ID=BSGatlas-gene-508_transcribed;color=#3474B3;Name=ydaC;Parent=BSGatlas-transcript-464;comment="putative methyltransferase";ec="2.1.1.-";go="GO:0008152 metabolic process,GO:0008168 methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydaC";derives_from=BSGatlas-gene-508 basu168 BSGatlas UTR 471503 471583 . - . ID=BSGatlas-5'UTR-281;Parent=BSGatlas-transcript-464;comment="5'UTR" basu168 BSGatlas transcript 471679 474225 . + . ID=BSGatlas-transcript-466;color=#FF9900;Parent=BSGatlas-gene-509,BSGatlas-gene-510,BSGatlas-gene-511,BSGatlas-gene-512;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 471679 473110 . + . ID=BSGatlas-transcript-465;color=#FF9900;Parent=BSGatlas-gene-509,BSGatlas-gene-510;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 471679 471708 . + . ID=BSGatlas-5'UTR-282;Parent=BSGatlas-transcript-465,BSGatlas-transcript-466;comment="5'UTR" basu168 BSGatlas gene 471709 472569 . + . ID=BSGatlas-gene-509;color=#1E90FF;Name=ydaD;locus_tag=BSU_04190,BSU04190 basu168 BSGatlas CDS 471709 472569 . + 0 ID=BSGatlas-gene-509_transcribed;color=#1E90FF;Name=ydaD;Parent=BSGatlas-transcript-465,BSGatlas-transcript-466;comment="putative dehydrogenase";ec="1.1.1.-";go="GO:0006950 response to stress,GO:0008152 metabolic process,GO:0016491 oxidoreductase activity,GO:0042542 response to hydrogen peroxide,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydaD";derives_from=BSGatlas-gene-509 basu168 BSGatlas gene 472585 473088 . + . ID=BSGatlas-gene-510;color=#1E90FF;Name=ydaE;locus_tag=BSU_04200,BSU04200 basu168 BSGatlas CDS 472585 473088 . + 0 ID=BSGatlas-gene-510_transcribed;color=#1E90FF;Name=ydaE;Parent=BSGatlas-transcript-465,BSGatlas-transcript-466;comment="D-lyxose ketol isomerase";ec="5.3.1.15";go="GO:0000303 response to superoxide,GO:0005975 carbohydrate metabolic process,GO:0016853 isomerase activity,GO:0046872 metal ion binding,GO:0047828 D-lyxose ketol-isomerase activity";kegg_pathways="Pentose and glucuronate interconversions (ko00040)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.28 Utilization of other pentoses and hexoses,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="ydaE";derives_from=BSGatlas-gene-510 basu168 BSGatlas UTR 473089 473173 . + . ID=BSGatlas-internal_UTR-166;Parent=BSGatlas-transcript-466;comment="internal_UTR" basu168 BSGatlas UTR 473089 473110 . + . ID=BSGatlas-3'UTR-160;Parent=BSGatlas-transcript-465;comment="3'UTR" basu168 BSGatlas transcript 473140 474225 . + . ID=BSGatlas-transcript-467;color=#FF9900;Parent=BSGatlas-gene-511,BSGatlas-gene-512;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 473140 473173 . + . ID=BSGatlas-5'UTR-283;Parent=BSGatlas-transcript-467;comment="5'UTR" basu168 BSGatlas gene 473174 473725 . + . ID=BSGatlas-gene-511;color=#1E90FF;Name=ydaF;locus_tag=BSU_04210,BSU04210 basu168 BSGatlas CDS 473174 473725 . + 0 ID=BSGatlas-gene-511_transcribed;color=#1E90FF;Name=ydaF;Parent=BSGatlas-transcript-466,BSGatlas-transcript-467;comment="putative ribosomal protein N-acetyltransferase";ec="2.3.1.-";go="GO:0008080 N-acetyltransferase activity,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydaF";derives_from=BSGatlas-gene-511 basu168 BSGatlas UTR 473726 473802 . + . ID=BSGatlas-internal_UTR-167;Parent=BSGatlas-transcript-466,BSGatlas-transcript-467;comment="internal_UTR" basu168 BSGatlas transcript 473775 474225 . + . ID=BSGatlas-transcript-468;color=#FF9900;Parent=BSGatlas-gene-512;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 473775 473802 . + . ID=BSGatlas-5'UTR-284;Parent=BSGatlas-transcript-468;comment="5'UTR" basu168 BSGatlas gene 473803 474225 . + . ID=BSGatlas-gene-512;color=#1E90FF;Name=ydaG;locus_tag=BSU_04220,BSU04220 basu168 BSGatlas CDS 473803 474225 . + 0 ID=BSGatlas-gene-512_transcribed;color=#1E90FF;Name=ydaG;Parent=BSGatlas-transcript-466,BSGatlas-transcript-467,BSGatlas-transcript-468;comment="putative general stress protein";go="GO:0000303 response to superoxide,GO:0004733 pyridoxamine-phosphate oxidase activity,GO:0006950 response to stress,GO:0010181 FMN binding,GO:0016491 oxidoreductase activity,GO:0042823 pyridoxal phosphate biosynthetic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="ydaG,yzzA";derives_from=BSGatlas-gene-512 basu168 BSGatlas transcript 474268 474657 . + . ID=BSGatlas-transcript-470;color=#FF9900;Parent=BSGatlas-gene-513;comment="Based on: BSGatlas" basu168 BSGatlas gene 474268 474634 . + . ID=BSGatlas-gene-513;color=#CC0000;Name=S140;locus_tag=new_474268_474634 basu168 BSGatlas transcript 474268 474634 . + . ID=BSGatlas-transcript-469;color=#FF9900;Parent=BSGatlas-gene-513;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 474268 474634 . + . ID=BSGatlas-gene-513_transcribed;color=#CC0000;Name=S140;Parent=BSGatlas-transcript-469,BSGatlas-transcript-470;synonyms="S140";derives_from=BSGatlas-gene-513 basu168 BSGatlas gene 474329 474597 . - . ID=BSGatlas-gene-514;color=#24B324;Name=bsrC;locus_tag=BSU_misc_RNA_64,G8J2-159 basu168 BSGatlas transcript 474329 474597 . - . ID=BSGatlas-transcript-471;color=#B37924;Parent=BSGatlas-gene-514;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas sRNA 474329 474597 . - . ID=BSGatlas-gene-514_transcribed;color=#24B324;Name=bsrC;Parent=BSGatlas-transcript-471;comment="small regulatory RNA";subtiwiki_category="SW 6 Groups of genes,SW 6.9 NcRNA,SW 6.9.7 Small RNAs with unknown functions";synonyms="bsrC,NA";derives_from=BSGatlas-gene-514 basu168 BSGatlas UTR 474635 474657 . + . ID=BSGatlas-3'UTR-161;Parent=BSGatlas-transcript-470;comment="3'UTR" basu168 BSGatlas transcript 474698 475540 . + . ID=BSGatlas-transcript-472;color=#FF9900;Parent=BSGatlas-gene-515;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 474698 474730 . + . ID=BSGatlas-5'UTR-285;Parent=BSGatlas-transcript-472;comment="5'UTR" basu168 BSGatlas gene 474731 475540 . + . ID=BSGatlas-gene-515;color=#1E90FF;Name=amj;locus_tag=BSU_04230,BSU04230 basu168 BSGatlas CDS 474731 475540 . + 0 ID=BSGatlas-gene-515_transcribed;color=#1E90FF;Name=amj;Parent=BSGatlas-transcript-472;comment="lipid II flippase";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="amj,ydaH";derives_from=BSGatlas-gene-515 basu168 BSGatlas transcript 475566 475918 . - . ID=BSGatlas-transcript-473;color=#B37924;Parent=BSGatlas-gene-516;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 475566 475583 . - . ID=BSGatlas-3'UTR-162;Parent=BSGatlas-transcript-473;comment="3'UTR" basu168 BSGatlas gene 475584 475874 . - . ID=BSGatlas-gene-516;color=#3474B3;Name=ydzA;locus_tag=BSU_04240,BSU04240 basu168 BSGatlas CDS 475584 475874 . - 0 ID=BSGatlas-gene-516_transcribed;color=#3474B3;Name=ydzA;Parent=BSGatlas-transcript-473;comment="conserved protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzA";derives_from=BSGatlas-gene-516 basu168 BSGatlas UTR 475875 475918 . - . ID=BSGatlas-5'UTR-286;Parent=BSGatlas-transcript-473;comment="5'UTR" basu168 BSGatlas transcript 475908 478741 . + . ID=BSGatlas-transcript-475;color=#FF9900;Parent=BSGatlas-gene-517,BSGatlas-gene-518;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 475908 476493 . + . ID=BSGatlas-transcript-474;color=#FF9900;Parent=BSGatlas-gene-517;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 475908 476058 . + . ID=BSGatlas-5'UTR-287;Parent=BSGatlas-transcript-474,BSGatlas-transcript-475;comment="5'UTR" basu168 BSGatlas transcript 476033 478741 . + . ID=BSGatlas-transcript-477;color=#FF9900;Parent=BSGatlas-gene-517,BSGatlas-gene-518;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 476033 476493 . + . ID=BSGatlas-transcript-476;color=#FF9900;Parent=BSGatlas-gene-517;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 476033 476058 . + . ID=BSGatlas-5'UTR-288;Parent=BSGatlas-transcript-476,BSGatlas-transcript-477;comment="5'UTR" basu168 BSGatlas gene 476059 476493 . + . ID=BSGatlas-gene-517;color=#1E90FF;Name=lrpC;locus_tag=BSU_04250,BSU04250 basu168 BSGatlas CDS 476059 476493 . + 0 ID=BSGatlas-gene-517_transcribed;color=#1E90FF;Name=lrpC;Parent=BSGatlas-transcript-474,BSGatlas-transcript-475,BSGatlas-transcript-476,BSGatlas-transcript-477;comment="transcriptional regulator (Lrp/AsnC family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins";synonyms="lrpC,ydaI";derives_from=BSGatlas-gene-517 basu168 BSGatlas UTR 476494 476557 . + . ID=BSGatlas-internal_UTR-168;Parent=BSGatlas-transcript-475,BSGatlas-transcript-477;comment="internal_UTR" basu168 BSGatlas transcript 476502 478741 . + . ID=BSGatlas-transcript-478;color=#FF9900;Parent=BSGatlas-gene-518;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 476502 476557 . + . ID=BSGatlas-5'UTR-289;Parent=BSGatlas-transcript-478;comment="5'UTR" basu168 BSGatlas gene 476558 478741 . + . ID=BSGatlas-gene-518;color=#1E90FF;Name=topB;locus_tag=BSU_04260,BSU04260 basu168 BSGatlas CDS 476558 478741 . + 0 ID=BSGatlas-gene-518_transcribed;color=#1E90FF;Name=topB;Parent=BSGatlas-transcript-475,BSGatlas-transcript-477,BSGatlas-transcript-478;comment="DNA topoisomerase III";ec="5.99.1.2,EC-5.99.1.2";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0003677 DNA binding,GO:0003916 DNA topoisomerase activity,GO:0003917 DNA topoisomerase type I activity,GO:0005524 ATP binding,GO:0006265 DNA topological change,GO:0016853 isomerase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.1 DNA replication,SW 3.1.3 DNA condensation/ segregation";synonyms="topB";derives_from=BSGatlas-gene-518 basu168 BSGatlas transcript 478812 485956 . + . ID=BSGatlas-transcript-479;color=#FF9900;Parent=BSGatlas-gene-519,BSGatlas-gene-520,BSGatlas-gene-521,BSGatlas-gene-522,BSGatlas-gene-523;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 478812 478943 . + . ID=BSGatlas-5'UTR-290;Parent=BSGatlas-transcript-479;comment="5'UTR" basu168 BSGatlas gene 478944 480032 . + . ID=BSGatlas-gene-519;color=#1E90FF;Name=ydaJ;locus_tag=BSU_04270,BSU04270 basu168 BSGatlas CDS 478944 480032 . + 0 ID=BSGatlas-gene-519_transcribed;color=#1E90FF;Name=ydaJ;Parent=BSGatlas-transcript-479;comment="glycosyl hydrolase lipoprotein";go="GO:0003824 catalytic activity,GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0016020 membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="ydaJ";derives_from=BSGatlas-gene-519 basu168 BSGatlas gene 480013 480864 . + . ID=BSGatlas-gene-520;color=#1E90FF;Name=ydaK;locus_tag=BSU_04280,BSU04280 basu168 BSGatlas CDS 480013 480864 . + 0 ID=BSGatlas-gene-520_transcribed;color=#1E90FF;Name=ydaK;Parent=BSGatlas-transcript-479;comment="cyclic-di-GMP receptor";go="GO:0005886 plasma membrane,GO:0009190 cyclic nucleotide biosynthetic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016849 phosphorus-oxygen lyase activity,GO:0035556 intracellular signal transduction";subtiwiki_category="SW 3 Information processing,SW 3.5 Targets of second messengers,SW 3.5.2 Targets of c-di-GMP,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydaK";derives_from=BSGatlas-gene-520 basu168 BSGatlas gene 480875 482584 . + . ID=BSGatlas-gene-521;color=#1E90FF;Name=ydaL;locus_tag=BSU_04290,BSU04290 basu168 BSGatlas CDS 480875 482584 . + 0 ID=BSGatlas-gene-521_transcribed;color=#1E90FF;Name=ydaL;Parent=BSGatlas-transcript-479;comment="conserved protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydaL";derives_from=BSGatlas-gene-521 basu168 BSGatlas gene 482577 483839 . + . ID=BSGatlas-gene-522;color=#1E90FF;Name=ydaM;locus_tag=BSU_04300,BSU04300 basu168 BSGatlas CDS 482577 483839 . + 0 ID=BSGatlas-gene-522_transcribed;color=#1E90FF;Name=ydaM;Parent=BSGatlas-transcript-479;comment="putative glycosyltransferase associated tobiofilm formation";ec="2.4.-.-";go="GO:0008152 metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016740 transferase activity,GO:0016757 transferase activity, transferring glycosyl groups";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydaM";derives_from=BSGatlas-gene-522 basu168 BSGatlas gene 483845 485956 . + . ID=BSGatlas-gene-523;color=#1E90FF;Name=ydaN;locus_tag=BSU_04310,BSU04310 basu168 BSGatlas CDS 483845 485956 . + 0 ID=BSGatlas-gene-523_transcribed;color=#1E90FF;Name=ydaN;Parent=BSGatlas-transcript-479;comment="putative regulator of exopolysaccharidesynthesis";go="GO:0005886 plasma membrane,GO:0006011 UDP-glucose metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="ydaN";derives_from=BSGatlas-gene-523 basu168 BSGatlas transcript 486082 488255 . + . ID=BSGatlas-transcript-480;color=#FF9900;Parent=BSGatlas-gene-525;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 486082 486431 . + . ID=BSGatlas-5'UTR-291;Parent=BSGatlas-transcript-480;comment="5'UTR" basu168 BSGatlas transcript 486091 486255 . + . ID=BSGatlas-transcript-481;color=#FF9900;Parent=BSGatlas-gene-524;comment="Based on: BSGatlas" basu168 BSGatlas gene 486091 486235 . + . ID=BSGatlas-gene-524;color=#999999;Name=c-di-AMP riboswitch, kimA;locus_tag=BSU_misc_RNA_7,BSU_MISC_RNA_7 basu168 BSGatlas riboswitch 486091 486235 . + . ID=BSGatlas-gene-524_transcribed;color=#999999;Name=c-di-AMP riboswitch, kimA;Parent=BSGatlas-transcript-481;comment="ATP-, cyclic di-AMP-sensing riboswitch";subtiwiki_category="SW 3 Information processing,SW 3.5 Targets of second messengers,SW 3.5.1 Targets of c-di-AMP";synonyms="BSU_misc_RNA_7,c-di-AMP riboswitch,c-di-AMP riboswitch, kimA,kimA,ydaO riboswitch";derives_from=BSGatlas-gene-524 basu168 BSGatlas UTR 486236 486255 . + . ID=BSGatlas-3'UTR-163;Parent=BSGatlas-transcript-481;comment="3'UTR" basu168 BSGatlas gene 486432 488255 . + . ID=BSGatlas-gene-525;color=#1E90FF;Name=kimA;locus_tag=BSU_04320,BSU04320 basu168 BSGatlas CDS 486432 488255 . + 0 ID=BSGatlas-gene-525_transcribed;color=#1E90FF;Name=kimA;Parent=BSGatlas-transcript-480;comment="cyclic di-AMP controlled transporter ofpotassium";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0015171 amino acid transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.5 Metal ion transporter,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.3 Potassium uptake/ export,SW 3 Information processing,SW 3.5 Targets of second messengers,SW 3.5.1 Targets of c-di-AMP,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="kimA,ydaO";derives_from=BSGatlas-gene-525 basu168 BSGatlas gene 488314 488763 . + . ID=BSGatlas-gene-526;color=#1E90FF;Name=mutT;locus_tag=BSU_04330,BSU04330 basu168 BSGatlas CDS 488314 488763 . + 0 ID=BSGatlas-gene-526_transcribed;color=#1E90FF;Name=mutT;comment="putative NTP pyrophosphohydrolase";ec="3.6.1.-,EC-3.6.1.9";go="GO:0006260 DNA replication,GO:0006281 DNA repair,GO:0006974 cellular response to DNA damage stimulus,GO:0016787 hydrolase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins";synonyms="mutT,nudG";derives_from=BSGatlas-gene-526 basu168 BSGatlas transcript 488811 490596 . + . ID=BSGatlas-transcript-482;color=#FF9900;Parent=BSGatlas-gene-527;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 488811 488829 . + . ID=BSGatlas-5'UTR-292;Parent=BSGatlas-transcript-482;comment="5'UTR" basu168 BSGatlas gene 488830 490554 . + . ID=BSGatlas-gene-527;color=#1E90FF;Name=ydaP;locus_tag=BSU_04340,BSU04340 basu168 BSGatlas CDS 488830 490554 . + 0 ID=BSGatlas-gene-527_transcribed;color=#1E90FF;Name=ydaP;Parent=BSGatlas-transcript-482;comment="acetyl-phosphate generating pyruvate oxidase";ec="1.2.3.3";go="GO:0000287 magnesium ion binding,GO:0000303 response to superoxide,GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0030976 thiamine pyrophosphate binding,GO:0046872 metal ion binding";kegg_pathways="Metabolic pathways (ko01100),Pyruvate metabolism (ko00620)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydaP";derives_from=BSGatlas-gene-527 basu168 BSGatlas gene 490527 490638 . - . ID=BSGatlas-gene-528;color=#8F1D1D;Name=S144;locus_tag=new_490527_490638_c basu168 BSGatlas transcript 490527 490638 . - . ID=BSGatlas-transcript-4925;color=#B37924;Parent=BSGatlas-gene-528;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 490527 490638 . - . ID=BSGatlas-gene-528_transcribed;color=#8F1D1D;Name=S144;Parent=BSGatlas-transcript-4925;synonyms="S144";derives_from=BSGatlas-gene-528 basu168 BSGatlas gene 490546 490749 . - . ID=BSGatlas-gene-529;color=#3474B3;locus_tag=BSU_04345 basu168 BSGatlas transcript 490546 490749 . - . ID=BSGatlas-transcript-484;color=#B37924;Parent=BSGatlas-gene-529;comment="Based on: BSGatlas" basu168 BSGatlas CDS 490546 490749 . - 0 ID=BSGatlas-gene-529_transcribed;color=#3474B3;Parent=BSGatlas-transcript-484;comment="hypothetical protein";synonyms="BSU_04345,NA";derives_from=BSGatlas-gene-529 basu168 BSGatlas UTR 490555 490596 . + . ID=BSGatlas-3'UTR-165;Parent=BSGatlas-transcript-482;comment="3'UTR" basu168 BSGatlas gene 490639 490854 . + . ID=BSGatlas-gene-530;color=#CC0000;Name=S145;locus_tag=new_490639_490854 basu168 BSGatlas transcript 490639 490854 . + . ID=BSGatlas-transcript-485;color=#FF9900;Parent=BSGatlas-gene-530;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 490639 490854 . + . ID=BSGatlas-gene-530_transcribed;color=#CC0000;Name=S145;Parent=BSGatlas-transcript-485;synonyms="S145";derives_from=BSGatlas-gene-530 basu168 BSGatlas transcript 490726 491077 . - . ID=BSGatlas-transcript-486;color=#B37924;Parent=BSGatlas-gene-531;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 490726 490776 . - . ID=BSGatlas-3'UTR-166;Parent=BSGatlas-transcript-486;comment="3'UTR" basu168 BSGatlas gene 490777 491043 . - . ID=BSGatlas-gene-531;color=#3474B3;Name=ydzK;locus_tag=BSU_04359,BSU04359 basu168 BSGatlas CDS 490777 491043 . - 0 ID=BSGatlas-gene-531_transcribed;color=#3474B3;Name=ydzK;Parent=BSGatlas-transcript-486;comment="putative membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzK";derives_from=BSGatlas-gene-531 basu168 BSGatlas UTR 491044 491077 . - . ID=BSGatlas-5'UTR-293;Parent=BSGatlas-transcript-486;comment="5'UTR" basu168 BSGatlas transcript 491110 492577 . - . ID=BSGatlas-transcript-488;color=#B37924;Parent=BSGatlas-gene-532;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 491110 492498 . - . ID=BSGatlas-transcript-487;color=#B37924;Parent=BSGatlas-gene-532;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 491110 491146 . - . ID=BSGatlas-3'UTR-167;Parent=BSGatlas-transcript-487,BSGatlas-transcript-488;comment="3'UTR" basu168 BSGatlas gene 491147 492424 . - . ID=BSGatlas-gene-532;color=#3474B3;Name=mntH;locus_tag=BSU_04360,BSU04360 basu168 BSGatlas CDS 491147 492424 . - 0 ID=BSGatlas-gene-532_transcribed;color=#3474B3;Name=mntH;Parent=BSGatlas-transcript-487,BSGatlas-transcript-488;comment="proton-coupled manganese transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0015293 symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0030001 metal ion transport,GO:0046872 metal ion binding,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.5 Metal ion transporter,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.2 Manganese,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="mntH,ydaR";derives_from=BSGatlas-gene-532 basu168 BSGatlas UTR 492425 492577 . - . ID=BSGatlas-5'UTR-295;Parent=BSGatlas-transcript-488;comment="5'UTR" basu168 BSGatlas UTR 492425 492498 . - . ID=BSGatlas-5'UTR-294;Parent=BSGatlas-transcript-487;comment="5'UTR" basu168 BSGatlas transcript 492595 494928 . - . ID=BSGatlas-transcript-491;color=#B37924;Parent=BSGatlas-gene-534,BSGatlas-gene-533;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 492595 493477 . - . ID=BSGatlas-transcript-490;color=#B37924;Parent=BSGatlas-gene-534,BSGatlas-gene-533;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 492595 492911 . - . ID=BSGatlas-transcript-489;color=#B37924;Parent=BSGatlas-gene-533;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 492595 492653 . - . ID=BSGatlas-3'UTR-168;Parent=BSGatlas-transcript-489,BSGatlas-transcript-490,BSGatlas-transcript-491;comment="3'UTR" basu168 BSGatlas transcript 492654 494928 . - . ID=BSGatlas-transcript-494;color=#B37924;Parent=BSGatlas-gene-534,BSGatlas-gene-533;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 492654 493477 . - . ID=BSGatlas-transcript-493;color=#B37924;Parent=BSGatlas-gene-534,BSGatlas-gene-533;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 492654 492911 . - . ID=BSGatlas-gene-533;color=#3474B3;Name=ydaS;locus_tag=BSU_04370,BSU04370 basu168 BSGatlas transcript 492654 492911 . - . ID=BSGatlas-transcript-492;color=#B37924;Parent=BSGatlas-gene-533;comment="Based on: SubtiWiki" basu168 BSGatlas CDS 492654 492911 . - 0 ID=BSGatlas-gene-533_transcribed;color=#3474B3;Name=ydaS;Parent=BSGatlas-transcript-489,BSGatlas-transcript-490,BSGatlas-transcript-491,BSGatlas-transcript-492,BSGatlas-transcript-493,BSGatlas-transcript-494;comment="conserved protein of unknown function";go="GO:0000303 response to superoxide,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="ydaS";derives_from=BSGatlas-gene-533 basu168 BSGatlas UTR 492912 492988 . - . ID=BSGatlas-internal_UTR-169;Parent=BSGatlas-transcript-490,BSGatlas-transcript-491,BSGatlas-transcript-493,BSGatlas-transcript-494;comment="internal_UTR" basu168 BSGatlas gene 492989 493441 . - . ID=BSGatlas-gene-534;color=#3474B3;Name=ydaT;locus_tag=BSU_04380,BSU04380 basu168 BSGatlas CDS 492989 493441 . - 0 ID=BSGatlas-gene-534_transcribed;color=#3474B3;Name=ydaT;Parent=BSGatlas-transcript-490,BSGatlas-transcript-491,BSGatlas-transcript-493,BSGatlas-transcript-494;comment="conserved protein of unknown function";go="GO:0000303 response to superoxide";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="ydaT";derives_from=BSGatlas-gene-534 basu168 BSGatlas UTR 493442 494928 . - . ID=BSGatlas-5'UTR-297;Parent=BSGatlas-transcript-491,BSGatlas-transcript-494;comment="5'UTR" basu168 BSGatlas UTR 493442 493477 . - . ID=BSGatlas-5'UTR-296;Parent=BSGatlas-transcript-490,BSGatlas-transcript-493;comment="5'UTR" basu168 BSGatlas transcript 493510 494424 . + . ID=BSGatlas-transcript-495;color=#FF9900;Parent=BSGatlas-gene-535;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 493510 493558 . + . ID=BSGatlas-5'UTR-298;Parent=BSGatlas-transcript-495;comment="5'UTR" basu168 BSGatlas gene 493559 494377 . + . ID=BSGatlas-gene-535;color=#1E90FF;Name=ydbA;locus_tag=BSU_04390,BSU04390 basu168 BSGatlas CDS 493559 494377 . + 0 ID=BSGatlas-gene-535_transcribed;color=#1E90FF;Name=ydbA;Parent=BSGatlas-transcript-495;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydbA";derives_from=BSGatlas-gene-535 basu168 BSGatlas UTR 494378 494424 . + . ID=BSGatlas-3'UTR-169;Parent=BSGatlas-transcript-495;comment="3'UTR" basu168 BSGatlas transcript 494479 494955 . + . ID=BSGatlas-transcript-496;color=#FF9900;Parent=BSGatlas-gene-536;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 494479 494505 . + . ID=BSGatlas-5'UTR-299;Parent=BSGatlas-transcript-496;comment="5'UTR" basu168 BSGatlas gene 494506 494877 . + . ID=BSGatlas-gene-536;color=#1E90FF;Name=gsiB;locus_tag=BSU_04400,BSU04400 basu168 BSGatlas CDS 494506 494877 . + 0 ID=BSGatlas-gene-536_transcribed;color=#1E90FF;Name=gsiB;Parent=BSGatlas-transcript-496;comment="general stress protein glucose starvationinduced";go="GO:0006950 response to stress";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="gsiB";derives_from=BSGatlas-gene-536 basu168 BSGatlas UTR 494878 494955 . + . ID=BSGatlas-3'UTR-171;Parent=BSGatlas-transcript-496;comment="3'UTR" basu168 BSGatlas transcript 494982 495703 . + . ID=BSGatlas-transcript-4926;color=#FF9900;Parent=BSGatlas-gene-537,BSGatlas-gene-538;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 494982 495703 . + . ID=BSGatlas-transcript-499;color=#FF9900;Parent=BSGatlas-gene-537,BSGatlas-gene-538;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 494982 495008 . + . ID=BSGatlas-5'UTR-300;Parent=BSGatlas-transcript-499,BSGatlas-transcript-4926;comment="5'UTR" basu168 BSGatlas gene 495009 495350 . + . ID=BSGatlas-gene-537;color=#1E90FF;Name=ydbB;locus_tag=BSU_04410,BSU04410 basu168 BSGatlas CDS 495009 495350 . + 0 ID=BSGatlas-gene-537_transcribed;color=#1E90FF;Name=ydbB;Parent=BSGatlas-transcript-499,BSGatlas-transcript-4926;comment="putative enzyme; cupin family";go="GO:0030145 manganese ion binding";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydbB";derives_from=BSGatlas-gene-537 basu168 BSGatlas gene 495344 495703 . + . ID=BSGatlas-gene-538;color=#1E90FF;Name=ydbC;locus_tag=BSU_04420,BSU04420 basu168 BSGatlas CDS 495344 495703 . + 0 ID=BSGatlas-gene-538_transcribed;color=#1E90FF;Name=ydbC;Parent=BSGatlas-transcript-499,BSGatlas-transcript-4926;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydbC";derives_from=BSGatlas-gene-538 basu168 BSGatlas transcript 495694 497716 . - . ID=BSGatlas-transcript-503;color=#B37924;Parent=BSGatlas-gene-540,BSGatlas-gene-539;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 495694 496586 . - . ID=BSGatlas-transcript-502;color=#B37924;Parent=BSGatlas-gene-539;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 495694 495739 . - . ID=BSGatlas-3'UTR-173;Parent=BSGatlas-transcript-502,BSGatlas-transcript-503;comment="3'UTR" basu168 BSGatlas gene 495740 496561 . - . ID=BSGatlas-gene-539;color=#3474B3;Name=ydbD;locus_tag=BSU_04430,BSU04430 basu168 BSGatlas CDS 495740 496561 . - 0 ID=BSGatlas-gene-539_transcribed;color=#3474B3;Name=ydbD;Parent=BSGatlas-transcript-502,BSGatlas-transcript-503;comment="putative manganese-containing catalase";ec="1.11.1.6,EC-1.11.1.21;EC-1.11.1.6";go="GO:0004096 catalase activity,GO:0004601 peroxidase activity,GO:0006950 response to stress,GO:0016491 oxidoreductase activity,GO:0042542 response to hydrogen peroxide,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.9 Resistance against oxidative and electrophile stress/ based on similarity";synonyms="ydbD";derives_from=BSGatlas-gene-539 basu168 BSGatlas UTR 496562 496645 . - . ID=BSGatlas-internal_UTR-170;Parent=BSGatlas-transcript-503;comment="internal_UTR" basu168 BSGatlas UTR 496562 496586 . - . ID=BSGatlas-5'UTR-301;Parent=BSGatlas-transcript-502;comment="5'UTR" basu168 BSGatlas gene 496646 497698 . - . ID=BSGatlas-gene-540;color=#3474B3;Name=dctB;locus_tag=BSU_04440,BSU04440 basu168 BSGatlas CDS 496646 497698 . - 0 ID=BSGatlas-gene-540_transcribed;color=#3474B3;Name=dctB;Parent=BSGatlas-transcript-503;comment="membrane bound C4-dicarboxylate binding sensorprotein";go="GO:0005576 extracellular region,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0030288 outer membrane-bounded periplasmic space";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids";synonyms="dctB,ydbE";derives_from=BSGatlas-gene-540 basu168 BSGatlas transcript 496981 501472 . + . ID=BSGatlas-transcript-504;color=#FF9900;Parent=BSGatlas-gene-541,BSGatlas-gene-542,BSGatlas-gene-543;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 496981 497767 . + . ID=BSGatlas-5'UTR-302;Parent=BSGatlas-transcript-504;comment="5'UTR" basu168 BSGatlas UTR 497699 497716 . - . ID=BSGatlas-5'UTR-303;Parent=BSGatlas-transcript-503;comment="5'UTR" basu168 BSGatlas gene 497768 499375 . + . ID=BSGatlas-gene-541;color=#1E90FF;Name=dctS;locus_tag=BSU_04450,BSU04450 basu168 BSGatlas CDS 497768 499375 . + 0 ID=BSGatlas-gene-541_transcribed;color=#1E90FF;Name=dctS;Parent=BSGatlas-transcript-504;comment="two-component sensor histidine kinase";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0004871 NA,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation,GO:0031975 envelope";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="dctS,ydbF";derives_from=BSGatlas-gene-541 basu168 BSGatlas gene 499365 500045 . + . ID=BSGatlas-gene-542;color=#1E90FF;Name=dctR;locus_tag=BSU_04460,BSU04460 basu168 BSGatlas CDS 499365 500045 . + 0 ID=BSGatlas-gene-542_transcribed;color=#1E90FF;Name=dctR;Parent=BSGatlas-transcript-504;comment="two-component response regulator";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0001071 NA,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0009605 response to external stimulus,GO:0035556 intracellular signal transduction";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="dctR,ydbG";derives_from=BSGatlas-gene-542 basu168 BSGatlas UTR 500046 500165 . + . ID=BSGatlas-internal_UTR-171;Parent=BSGatlas-transcript-504;comment="internal_UTR" basu168 BSGatlas transcript 500124 501472 . + . ID=BSGatlas-transcript-505;color=#FF9900;Parent=BSGatlas-gene-543;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 500124 500165 . + . ID=BSGatlas-5'UTR-304;Parent=BSGatlas-transcript-505;comment="5'UTR" basu168 BSGatlas gene 500166 501431 . + . ID=BSGatlas-gene-543;color=#1E90FF;Name=dctP;locus_tag=BSU_04470,BSU04470 basu168 BSGatlas CDS 500166 501431 . + 0 ID=BSGatlas-gene-543_transcribed;color=#1E90FF;Name=dctP;Parent=BSGatlas-transcript-504,BSGatlas-transcript-505;comment="C4-dicarboxylate transport protein";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006835 dicarboxylic acid transport,GO:0008643 carbohydrate transport,GO:0015293 symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0017153 sodium:dicarboxylate symporter activity,GO:0035725 sodium ion transmembrane transport,GO:0055085 transmembrane transport";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.6 Dicarboxylate/amino acid:cation symporter,SW 1.2.4.4 Transporter for organic acids,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="dctA,dctP,ydbH";derives_from=BSGatlas-gene-543 basu168 BSGatlas UTR 501432 501472 . + . ID=BSGatlas-3'UTR-174;Parent=BSGatlas-transcript-504,BSGatlas-transcript-505;comment="3'UTR" basu168 BSGatlas transcript 501517 502631 . + . ID=BSGatlas-transcript-506;color=#FF9900;Parent=BSGatlas-gene-544;comment="Based on: BSGatlas" basu168 BSGatlas UTR 501517 501578 . + . ID=BSGatlas-5'UTR-305;Parent=BSGatlas-transcript-506;comment="5'UTR" basu168 BSGatlas gene 501579 502631 . + . ID=BSGatlas-gene-544;color=#1E90FF;Name=ydbI;locus_tag=BSU_04480,BSU04480 basu168 BSGatlas CDS 501579 502631 . + 0 ID=BSGatlas-gene-544_transcribed;color=#1E90FF;Name=ydbI;Parent=BSGatlas-transcript-506;comment="putative integral inner membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydbI";derives_from=BSGatlas-gene-544 basu168 BSGatlas gene 502668 502883 . + . ID=BSGatlas-gene-545;color=#999999;Name=TERMseq-predicted-riboswitch basu168 BSGatlas transcript 502668 502883 . + . ID=BSGatlas-transcript-507;color=#FF9900;Parent=BSGatlas-gene-545;comment="Based on: BSGatlas" basu168 BSGatlas riboswitch 502668 502883 . + . ID=BSGatlas-gene-545_transcribed;color=#999999;Name=TERMseq-predicted-riboswitch;Parent=BSGatlas-transcript-507;derives_from=BSGatlas-gene-545 basu168 BSGatlas gene 502908 503834 . + . ID=BSGatlas-gene-546;color=#1E90FF;Name=ydbJ;locus_tag=BSU_04490,BSU04490 basu168 BSGatlas CDS 502908 503834 . + 0 ID=BSGatlas-gene-546_transcribed;color=#1E90FF;Name=ydbJ;comment="putative ABC transporter (ATP-binding subunit)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.6 Exporters of unknown function,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydbJ";derives_from=BSGatlas-gene-546 basu168 BSGatlas gene 503854 504594 . + . ID=BSGatlas-gene-547;color=#1E90FF;Name=ydbK;locus_tag=BSU_04500,BSU04500 basu168 BSGatlas CDS 503854 504594 . + 0 ID=BSGatlas-gene-547_transcribed;color=#1E90FF;Name=ydbK;comment="putative efflux ABC-transporter (permeasesubunit)";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.6 Exporters of unknown function,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydbK";derives_from=BSGatlas-gene-547 basu168 BSGatlas transcript 504658 505024 . + . ID=BSGatlas-transcript-508;color=#FF9900;Parent=BSGatlas-gene-548;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 504658 504688 . + . ID=BSGatlas-5'UTR-306;Parent=BSGatlas-transcript-508;comment="5'UTR" basu168 BSGatlas gene 504689 505024 . + . ID=BSGatlas-gene-548;color=#1E90FF;Name=ydbL;locus_tag=BSU_04510,BSU04510 basu168 BSGatlas CDS 504689 505024 . + 0 ID=BSGatlas-gene-548_transcribed;color=#1E90FF;Name=ydbL;Parent=BSGatlas-transcript-508;comment="putative glyco-prenyl flippase subunit";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydbL";derives_from=BSGatlas-gene-548 basu168 BSGatlas transcript 505114 506333 . + . ID=BSGatlas-transcript-509;color=#FF9900;Parent=BSGatlas-gene-549;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 505114 505151 . + . ID=BSGatlas-5'UTR-307;Parent=BSGatlas-transcript-509;comment="5'UTR" basu168 BSGatlas gene 505152 506297 . + . ID=BSGatlas-gene-549;color=#1E90FF;Name=ydbM;locus_tag=BSU_04520,BSU04520 basu168 BSGatlas CDS 505152 506297 . + 0 ID=BSGatlas-gene-549_transcribed;color=#1E90FF;Name=ydbM;Parent=BSGatlas-transcript-509;comment="putative acyl-CoA dehydrogenase";ec="1.3.99.-,EC-1.3.8";go="GO:0003995 acyl-CoA dehydrogenase activity,GO:0008152 metabolic process,GO:0016491 oxidoreductase activity,GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors,GO:0050660 flavin adenine dinucleotide binding,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydbM";derives_from=BSGatlas-gene-549 basu168 BSGatlas transcript 506289 506672 . - . ID=BSGatlas-transcript-511;color=#B37924;Parent=BSGatlas-gene-551,BSGatlas-gene-550;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 506289 506321 . - . ID=BSGatlas-3'UTR-175;Parent=BSGatlas-transcript-511;comment="3'UTR" basu168 BSGatlas UTR 506298 506333 . + . ID=BSGatlas-3'UTR-176;Parent=BSGatlas-transcript-509;comment="3'UTR" basu168 BSGatlas gene 506322 506501 . - . ID=BSGatlas-gene-550;color=#3474B3;Name=fbpB;locus_tag=BSU_04530,BSU04530 basu168 BSGatlas CDS 506322 506501 . - 0 ID=BSGatlas-gene-550_transcribed;color=#3474B3;Name=fbpB;Parent=BSGatlas-transcript-511;comment="regulator of iron homeostasis";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.3 Acquisition of iron / Other,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.1 Acquisition of iron / Other,SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.2 RNA chaperones,SW 6 Groups of genes,SW 6.8 Short peptides";synonyms="fbpB,ydbN";derives_from=BSGatlas-gene-550 basu168 BSGatlas gene 506455 506619 . - . ID=BSGatlas-gene-551;color=#3474B3;Name=fbpA;locus_tag=BSU_04536,G8J2-18 basu168 BSGatlas CDS 506455 506619 . - 0 ID=BSGatlas-gene-551_transcribed;color=#3474B3;Name=fbpA;Parent=BSGatlas-transcript-511;comment="regulator of iron homeostasis";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.3 Acquisition of iron / Other,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.1 Acquisition of iron / Other";synonyms="fbpA";derives_from=BSGatlas-gene-551 basu168 BSGatlas UTR 506620 506672 . - . ID=BSGatlas-5'UTR-308;Parent=BSGatlas-transcript-511;comment="5'UTR" basu168 BSGatlas transcript 506836 507841 . + . ID=BSGatlas-transcript-512;color=#FF9900;Parent=BSGatlas-gene-552;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 506836 506865 . + . ID=BSGatlas-5'UTR-309;Parent=BSGatlas-transcript-512;comment="5'UTR" basu168 BSGatlas transcript 506866 507841 . + . ID=BSGatlas-transcript-513;color=#FF9900;Parent=BSGatlas-gene-552;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 506866 507738 . + . ID=BSGatlas-gene-552;color=#1E90FF;Name=ydbO;locus_tag=BSU_04540,BSU04540 basu168 BSGatlas CDS 506866 507738 . + 0 ID=BSGatlas-gene-552_transcribed;color=#1E90FF;Name=ydbO;Parent=BSGatlas-transcript-512,BSGatlas-transcript-513;comment="putative cation efflux system";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006812 cation transport,GO:0008324 cation transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034220 ion transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydbO";derives_from=BSGatlas-gene-552 basu168 BSGatlas transcript 507667 508109 . - . ID=BSGatlas-transcript-514;color=#B37924;Parent=BSGatlas-gene-553;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 507667 507752 . - . ID=BSGatlas-3'UTR-177;Parent=BSGatlas-transcript-514;comment="3'UTR" basu168 BSGatlas UTR 507739 507841 . + . ID=BSGatlas-3'UTR-178;Parent=BSGatlas-transcript-512,BSGatlas-transcript-513;comment="3'UTR" basu168 BSGatlas gene 507753 508073 . - . ID=BSGatlas-gene-553;color=#3474B3;Name=ydbP;locus_tag=BSU_04550,BSU04550 basu168 BSGatlas CDS 507753 508073 . - 0 ID=BSGatlas-gene-553_transcribed;color=#3474B3;Name=ydbP;Parent=BSGatlas-transcript-514;comment="putative thioredoxin or thiol-disulfideisomerase";go="GO:0006662 glycerol ether metabolic process,GO:0015035 protein disulfide oxidoreductase activity,GO:0045454 cell redox homeostasis,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.4 Electron transport/ other/ based on similarity";synonyms="ydbP";derives_from=BSGatlas-gene-553 basu168 BSGatlas UTR 508074 508109 . - . ID=BSGatlas-5'UTR-310;Parent=BSGatlas-transcript-514;comment="5'UTR" basu168 BSGatlas transcript 508090 510757 . + . ID=BSGatlas-transcript-516;color=#FF9900;Parent=BSGatlas-gene-554,BSGatlas-gene-555;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 508090 509312 . + . ID=BSGatlas-transcript-515;color=#FF9900;Parent=BSGatlas-gene-554;comment="Based on: BSGatlas" basu168 BSGatlas UTR 508090 508247 . + . ID=BSGatlas-5'UTR-311;Parent=BSGatlas-transcript-515,BSGatlas-transcript-516;comment="5'UTR" basu168 BSGatlas gene 508248 509312 . + . ID=BSGatlas-gene-554;color=#1E90FF;Name=ddl;locus_tag=BSU_04560,BSU04560 basu168 BSGatlas CDS 508248 509312 . + 0 ID=BSGatlas-gene-554_transcribed;color=#1E90FF;Name=ddl;Parent=BSGatlas-transcript-515,BSGatlas-transcript-516;comment="D-alanyl-D-alanine ligase A";ec="6.3.2.4,EC-6.3.2.4";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0003824 catalytic activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0008360 regulation of cell shape,GO:0008716 D-alanine-D-alanine ligase activity,GO:0009252 peptidoglycan biosynthetic process,GO:0016874 ligase activity,GO:0030145 manganese ion binding,GO:0046872 metal ion binding";kegg_pathways="D-Alanine metabolism (ko00473),Metabolic pathways (ko01100),Peptidoglycan biosynthesis (ko00550),Vancomycin resistance (ko01502)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="ddl,ddlA";derives_from=BSGatlas-gene-554 basu168 BSGatlas UTR 509313 509383 . + . ID=BSGatlas-internal_UTR-172;Parent=BSGatlas-transcript-516;comment="internal_UTR" basu168 BSGatlas gene 509384 510757 . + . ID=BSGatlas-gene-555;color=#1E90FF;Name=murF;locus_tag=BSU_04570,BSU04570 basu168 BSGatlas CDS 509384 510757 . + 0 ID=BSGatlas-gene-555_transcribed;color=#1E90FF;Name=murF;Parent=BSGatlas-transcript-516;comment="UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase";ec="6.3.2.10,EC-6.3.2.10";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0007049 cell cycle,GO:0008360 regulation of cell shape,GO:0008766 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity,GO:0009058 biosynthetic process,GO:0009252 peptidoglycan biosynthetic process,GO:0016874 ligase activity,GO:0047480 UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity,GO:0051301 cell division";kegg_pathways="Lysine biosynthesis (ko00300),Metabolic pathways (ko01100),Peptidoglycan biosynthesis (ko00550),Vancomycin resistance (ko01502)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="murF,ydbQ";derives_from=BSGatlas-gene-555 basu168 BSGatlas transcript 510818 512656 . + . ID=BSGatlas-transcript-517;color=#FF9900;Parent=BSGatlas-gene-556;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 510818 511156 . + . ID=BSGatlas-5'UTR-312;Parent=BSGatlas-transcript-517;comment="5'UTR" basu168 BSGatlas transcript 510862 512656 . + . ID=BSGatlas-transcript-518;color=#FF9900;Parent=BSGatlas-gene-556;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 510862 511156 . + . ID=BSGatlas-5'UTR-313;Parent=BSGatlas-transcript-518;comment="5'UTR" basu168 BSGatlas transcript 511038 512656 . + . ID=BSGatlas-transcript-519;color=#FF9900;Parent=BSGatlas-gene-556;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 511038 511156 . + . ID=BSGatlas-5'UTR-314;Parent=BSGatlas-transcript-519;comment="5'UTR" basu168 BSGatlas gene 511157 512641 . + . ID=BSGatlas-gene-556;color=#1E90FF;Name=cshA;locus_tag=BSU_04580,BSU04580 basu168 BSGatlas CDS 511157 512641 . + 0 ID=BSGatlas-gene-556_transcribed;color=#1E90FF;Name=cshA;Parent=BSGatlas-transcript-517,BSGatlas-transcript-518,BSGatlas-transcript-519;comment="ATP-dependent RNA helicase; cold shock";ec="3.6.1.-";go="GO:0000166 nucleotide binding,GO:0003676 nucleic acid binding,GO:0003723 RNA binding,GO:0004004 ATP-dependent RNA helicase activity,GO:0004386 helicase activity,GO:0005515 protein binding,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006950 response to stress,GO:0008026 ATP-dependent helicase activity,GO:0009295 nucleoid,GO:0009409 response to cold,GO:0010501 RNA secondary structure unwinding,GO:0016787 hydrolase activity,GO:0043590 bacterial nucleoid";kegg_pathways="RNA degradation (ko03018)";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.3 DEAD-box RNA helicases,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.6 Ribosome assembly,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.5 Cold stress proteins,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="cshA,ydbR";derives_from=BSGatlas-gene-556 basu168 BSGatlas UTR 512642 512656 . + . ID=BSGatlas-3'UTR-179;Parent=BSGatlas-transcript-517,BSGatlas-transcript-518,BSGatlas-transcript-519;comment="3'UTR" basu168 BSGatlas transcript 512756 514764 . + . ID=BSGatlas-transcript-4927;color=#FF9900;Parent=BSGatlas-gene-557,BSGatlas-gene-558;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 512756 512813 . + . ID=BSGatlas-5'UTR-2844;Parent=BSGatlas-transcript-4927;comment="5'UTR" basu168 BSGatlas transcript 512787 514764 . + . ID=BSGatlas-transcript-520;color=#FF9900;Parent=BSGatlas-gene-557,BSGatlas-gene-558;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 512787 512813 . + . ID=BSGatlas-5'UTR-315;Parent=BSGatlas-transcript-520;comment="5'UTR" basu168 BSGatlas gene 512814 513293 . + . ID=BSGatlas-gene-557;color=#1E90FF;Name=ydbS;locus_tag=BSU_04590,BSU04590 basu168 BSGatlas CDS 512814 513293 . + 0 ID=BSGatlas-gene-557_transcribed;color=#1E90FF;Name=ydbS;Parent=BSGatlas-transcript-4927,BSGatlas-transcript-520;comment="resistance to heterologous antibiotics";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydbS";derives_from=BSGatlas-gene-557 basu168 BSGatlas gene 513283 514764 . + . ID=BSGatlas-gene-558;color=#1E90FF;Name=ydbT;locus_tag=BSU_04600,BSU04600 basu168 BSGatlas CDS 513283 514764 . + 0 ID=BSGatlas-gene-558_transcribed;color=#1E90FF;Name=ydbT;Parent=BSGatlas-transcript-4927,BSGatlas-transcript-520;comment="resistance to heterologous antibiotics";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydbT";derives_from=BSGatlas-gene-558 basu168 BSGatlas transcript 514831 515045 . + . ID=BSGatlas-transcript-522;color=#FF9900;Parent=BSGatlas-gene-559;comment="Based on: BSGatlas" basu168 BSGatlas gene 514831 514898 . + . ID=BSGatlas-gene-559;color=#00FF00;Name=Bacillaceae-1 basu168 BSGatlas sRNA 514831 514898 . + . ID=BSGatlas-gene-559_transcribed;color=#00FF00;Name=Bacillaceae-1;Parent=BSGatlas-transcript-522;derives_from=BSGatlas-gene-559 basu168 BSGatlas UTR 514899 515045 . + . ID=BSGatlas-3'UTR-181;Parent=BSGatlas-transcript-522;comment="3'UTR" basu168 BSGatlas transcript 514951 515649 . - . ID=BSGatlas-transcript-523;color=#B37924;Parent=BSGatlas-gene-560;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 514951 515015 . - . ID=BSGatlas-3'UTR-182;Parent=BSGatlas-transcript-523;comment="3'UTR" basu168 BSGatlas gene 515016 515615 . - . ID=BSGatlas-gene-560;color=#3474B3;Name=ydcA;locus_tag=BSU_04610,BSU04610 basu168 BSGatlas CDS 515016 515615 . - 0 ID=BSGatlas-gene-560_transcribed;color=#3474B3;Name=ydcA;Parent=BSGatlas-transcript-523;comment="putative rhomboid protease";ec="3.4.21.-";go="GO:0004252 serine-type endopeptidase activity,GO:0005886 plasma membrane,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016787 hydrolase activity";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="ydcA";derives_from=BSGatlas-gene-560 basu168 BSGatlas transcript 515108 517299 . + . ID=BSGatlas-transcript-524;color=#FF9900;Parent=BSGatlas-gene-561,BSGatlas-gene-562;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 515108 515709 . + . ID=BSGatlas-5'UTR-316;Parent=BSGatlas-transcript-524;comment="5'UTR" basu168 BSGatlas UTR 515616 515649 . - . ID=BSGatlas-5'UTR-317;Parent=BSGatlas-transcript-523;comment="5'UTR" basu168 BSGatlas gene 515710 516075 . + . ID=BSGatlas-gene-561;color=#1E90FF;Name=acpS;locus_tag=BSU_04620,BSU04620 basu168 BSGatlas CDS 515710 516075 . + 0 ID=BSGatlas-gene-561_transcribed;color=#1E90FF;Name=acpS;Parent=BSGatlas-transcript-524;comment="holo-acyl carrier protein synthase(phosphopantetheinyl transferase)";ec="2.7.8.7,EC-2.7.8.7";go="GO:0000287 magnesium ion binding,GO:0005737 cytoplasm,GO:0006629 lipid metabolic process,GO:0006631 fatty acid metabolic process,GO:0006633 fatty acid biosynthetic process,GO:0008897 holo-[acyl-carrier-protein] synthase activity,GO:0009059 macromolecule biosynthetic process,GO:0016740 transferase activity,GO:0046872 metal ion binding";kegg_pathways="Pantothenate and CoA biosynthesis (ko00770)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.2 Biosynthesis of lipids,SW 2.4.2.1 Biosynthesis of fatty acids,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="acpS,ydcB";derives_from=BSGatlas-gene-561 basu168 BSGatlas UTR 516076 516240 . + . ID=BSGatlas-internal_UTR-173;Parent=BSGatlas-transcript-524;comment="internal_UTR" basu168 BSGatlas transcript 516115 517299 . + . ID=BSGatlas-transcript-525;color=#FF9900;Parent=BSGatlas-gene-562;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 516115 516240 . + . ID=BSGatlas-5'UTR-318;Parent=BSGatlas-transcript-525;comment="5'UTR" basu168 BSGatlas gene 516241 517257 . + . ID=BSGatlas-gene-562;color=#1E90FF;Name=ydcC;locus_tag=BSU_04630,BSU04630 basu168 BSGatlas CDS 516241 517257 . + 0 ID=BSGatlas-gene-562_transcribed;color=#1E90FF;Name=ydcC;Parent=BSGatlas-transcript-524,BSGatlas-transcript-525;comment="putative lipoprotein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.6 Phosphorylation on a Thr residue";synonyms="ydcC";derives_from=BSGatlas-gene-562 basu168 BSGatlas UTR 517258 517299 . + . ID=BSGatlas-3'UTR-183;Parent=BSGatlas-transcript-524,BSGatlas-transcript-525;comment="3'UTR" basu168 BSGatlas transcript 517330 519339 . + . ID=BSGatlas-transcript-527;color=#FF9900;Parent=BSGatlas-gene-563,BSGatlas-gene-564,BSGatlas-gene-565;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 517330 519293 . + . ID=BSGatlas-transcript-526;color=#FF9900;Parent=BSGatlas-gene-563,BSGatlas-gene-564,BSGatlas-gene-565;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 517330 517371 . + . ID=BSGatlas-5'UTR-319;Parent=BSGatlas-transcript-526,BSGatlas-transcript-527;comment="5'UTR" basu168 BSGatlas gene 517372 518541 . + . ID=BSGatlas-gene-563;color=#1E90FF;Name=alr;locus_tag=BSU_04640,BSU04640 basu168 BSGatlas CDS 517372 518541 . + 0 ID=BSGatlas-gene-563_transcribed;color=#1E90FF;Name=alr;Parent=BSGatlas-transcript-526,BSGatlas-transcript-527;comment="D-alanine racemase";ec="5.1.1.1,EC-5.1.1.1";go="GO:0003824 catalytic activity,GO:0006522 alanine metabolic process,GO:0008784 alanine racemase activity,GO:0016853 isomerase activity,GO:0030170 pyridoxal phosphate binding,GO:0030632 D-alanine biosynthetic process";kegg_pathways="D-Alanine metabolism (ko00473),Metabolic pathways (ko01100),Vancomycin resistance (ko01502)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.1 Biosynthesis of peptidoglycan,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.1 Biosynthesis/ acquisition of amino acids,SW 2.3.1.15 Biosynthesis/acquisition of L- and D-alanine,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.1 Biosynthesis of peptidoglycan,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="alr,alrA,dal";derives_from=BSGatlas-gene-563 basu168 BSGatlas transcript 518496 519339 . + . ID=BSGatlas-transcript-529;color=#FF9900;Parent=BSGatlas-gene-564,BSGatlas-gene-565;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 518496 519293 . + . ID=BSGatlas-transcript-528;color=#FF9900;Parent=BSGatlas-gene-564,BSGatlas-gene-565;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 518496 518656 . + . ID=BSGatlas-5'UTR-320;Parent=BSGatlas-transcript-528,BSGatlas-transcript-529;comment="5'UTR" basu168 BSGatlas UTR 518542 518656 . + . ID=BSGatlas-internal_UTR-174;Parent=BSGatlas-transcript-526,BSGatlas-transcript-527;comment="internal_UTR" basu168 BSGatlas transcript 518591 519339 . + . ID=BSGatlas-transcript-531;color=#FF9900;Parent=BSGatlas-gene-564,BSGatlas-gene-565;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 518591 519293 . + . ID=BSGatlas-transcript-530;color=#FF9900;Parent=BSGatlas-gene-564,BSGatlas-gene-565;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 518591 518656 . + . ID=BSGatlas-5'UTR-321;Parent=BSGatlas-transcript-530,BSGatlas-transcript-531;comment="5'UTR" basu168 BSGatlas gene 518657 518938 . + . ID=BSGatlas-gene-564;color=#1E90FF;Name=ndoAI;locus_tag=BSU_04650,BSU04650 basu168 BSGatlas CDS 518657 518938 . + 0 ID=BSGatlas-gene-564_transcribed;color=#1E90FF;Name=ndoAI;Parent=BSGatlas-transcript-526,BSGatlas-transcript-527,BSGatlas-transcript-528,BSGatlas-transcript-529,BSGatlas-transcript-530,BSGatlas-transcript-531;comment="antitoxin EndoAI";go="GO:0005515 protein binding,GO:0006355 regulation of transcription, DNA-templated,GO:0042802 identical protein binding,GO:0060698 endoribonuclease inhibitor activity,GO:0060702 negative regulation of endoribonuclease activity";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 4.3.17.2 Type 2 TA systems";synonyms="mazE,ndoAI,ydcD";derives_from=BSGatlas-gene-564 basu168 BSGatlas transcript 518943 519339 . + . ID=BSGatlas-transcript-533;color=#FF9900;Parent=BSGatlas-gene-565;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas gene 518943 519293 . + . ID=BSGatlas-gene-565;color=#1E90FF;Name=ndoA;locus_tag=BSU_04660,BSU04660 basu168 BSGatlas transcript 518943 519293 . + . ID=BSGatlas-transcript-532;color=#FF9900;Parent=BSGatlas-gene-565;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas CDS 518943 519293 . + 0 ID=BSGatlas-gene-565_transcribed;color=#1E90FF;Name=ndoA;Parent=BSGatlas-transcript-526,BSGatlas-transcript-527,BSGatlas-transcript-528,BSGatlas-transcript-529,BSGatlas-transcript-530,BSGatlas-transcript-531,BSGatlas-transcript-532,BSGatlas-transcript-533;comment="endoribonuclease toxin";go="GO:0003677 DNA binding,GO:0003723 RNA binding,GO:0004518 nuclease activity,GO:0004519 endonuclease activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters,GO:0042803 protein homodimerization activity,GO:0090305 nucleic acid phosphodiester bond hydrolysis,GO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.4 RNases,SW 3.2.4.2 Endoribonucleases,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 4.3.17.2 Type 2 TA systems";synonyms="endA,mazF,ndoA,ydcE";derives_from=BSGatlas-gene-565 basu168 BSGatlas transcript 519083 520765 . - . ID=BSGatlas-transcript-536;color=#B37924;Parent=BSGatlas-gene-566;comment="Based on: BSGatlas" basu168 BSGatlas transcript 519083 520160 . - . ID=BSGatlas-transcript-535;color=#B37924;Parent=BSGatlas-gene-566;comment="Based on: BSGatlas" basu168 BSGatlas gene 519083 519559 . - . ID=BSGatlas-gene-566;color=#8F1D1D;Name=S163;locus_tag=new_519083_519559_c basu168 BSGatlas transcript 519083 519559 . - . ID=BSGatlas-transcript-534;color=#B37924;Parent=BSGatlas-gene-566;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 519083 519559 . - . ID=BSGatlas-gene-566_transcribed;color=#8F1D1D;Name=S163;Parent=BSGatlas-transcript-534,BSGatlas-transcript-535,BSGatlas-transcript-536;synonyms="S163";derives_from=BSGatlas-gene-566 basu168 BSGatlas UTR 519294 519339 . + . ID=BSGatlas-3'UTR-184;Parent=BSGatlas-transcript-527,BSGatlas-transcript-529,BSGatlas-transcript-531,BSGatlas-transcript-533;comment="3'UTR" basu168 BSGatlas transcript 519362 524297 . + . ID=BSGatlas-transcript-538;color=#FF9900;Parent=BSGatlas-gene-567,BSGatlas-gene-568,BSGatlas-gene-569,BSGatlas-gene-570,BSGatlas-gene-571,BSGatlas-gene-572,BSGatlas-gene-573,BSGatlas-gene-574;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 519362 524249 . + . ID=BSGatlas-transcript-537;color=#FF9900;Parent=BSGatlas-gene-567,BSGatlas-gene-568,BSGatlas-gene-569,BSGatlas-gene-570,BSGatlas-gene-571,BSGatlas-gene-572,BSGatlas-gene-573,BSGatlas-gene-574;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 519362 519407 . + . ID=BSGatlas-5'UTR-322;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538;comment="5'UTR" basu168 BSGatlas gene 519408 520232 . + . ID=BSGatlas-gene-567;color=#1E90FF;Name=rsbR;locus_tag=BSU_04670,BSU04670 basu168 BSGatlas CDS 519408 520232 . + 0 ID=BSGatlas-gene-567_transcribed;color=#1E90FF;Name=rsbR;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538;comment="component of the anxiosome (stressosome);positive regulation of sigma(B) activity in response tosalt and heat stress";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.6 Phosphorylation on a Thr residue";synonyms="rsbR,rsbRA,ycxR";derives_from=BSGatlas-gene-567 basu168 BSGatlas UTR 519560 520765 . - . ID=BSGatlas-5'UTR-324;Parent=BSGatlas-transcript-536;comment="5'UTR" basu168 BSGatlas UTR 519560 520160 . - . ID=BSGatlas-5'UTR-323;Parent=BSGatlas-transcript-535;comment="5'UTR" basu168 BSGatlas gene 520237 520602 . + . ID=BSGatlas-gene-568;color=#1E90FF;Name=rsbS;locus_tag=BSU_04680,BSU04680 basu168 BSGatlas CDS 520237 520602 . + 0 ID=BSGatlas-gene-568_transcribed;color=#1E90FF;Name=rsbS;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538;comment="antagonist of RsbT";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="rsbS,ycxS";derives_from=BSGatlas-gene-568 basu168 BSGatlas gene 520606 521007 . + . ID=BSGatlas-gene-569;color=#1E90FF;Name=rsbT;locus_tag=BSU_04690,BSU04690 basu168 BSGatlas CDS 520606 521007 . + 0 ID=BSGatlas-gene-569_transcribed;color=#1E90FF;Name=rsbT;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538;comment="switch protein/serine-threonine kinase; controlsthe activity of the anxiosome (stressosome)";ec="2.7.11.1";go="GO:0000166 nucleotide binding,GO:0004674 protein serine/threonine kinase activity,GO:0005524 ATP binding,GO:0006468 protein phosphorylation,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors";synonyms="rsbT,ycxT";derives_from=BSGatlas-gene-569 basu168 BSGatlas gene 521019 522026 . + . ID=BSGatlas-gene-570;color=#1E90FF;Name=rsbU;locus_tag=BSU_04700,BSU04700 basu168 BSGatlas CDS 521019 522026 . + 0 ID=BSGatlas-gene-570_transcribed;color=#1E90FF;Name=rsbU;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538;comment="protein serine phosphatase; controls theactivity of the anxiosome (stressosome)";ec="3.1.3.3";go="GO:0003824 catalytic activity,GO:0004647 phosphoserine phosphatase activity,GO:0004721 phosphoprotein phosphatase activity,GO:0006468 protein phosphorylation,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors";synonyms="rsbU";derives_from=BSGatlas-gene-570 basu168 BSGatlas UTR 522027 522087 . + . ID=BSGatlas-internal_UTR-175;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538;comment="internal_UTR" basu168 BSGatlas transcript 522056 524297 . + . ID=BSGatlas-transcript-540;color=#FF9900;Parent=BSGatlas-gene-571,BSGatlas-gene-572,BSGatlas-gene-573,BSGatlas-gene-574;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 522056 524249 . + . ID=BSGatlas-transcript-539;color=#FF9900;Parent=BSGatlas-gene-571,BSGatlas-gene-572,BSGatlas-gene-573,BSGatlas-gene-574;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 522056 522087 . + . ID=BSGatlas-5'UTR-325;Parent=BSGatlas-transcript-539,BSGatlas-transcript-540;comment="5'UTR" basu168 BSGatlas gene 522088 522417 . + . ID=BSGatlas-gene-571;color=#1E90FF;Name=rsbV;locus_tag=BSU_04710,BSU04710 basu168 BSGatlas CDS 522088 522417 . + 0 ID=BSGatlas-gene-571_transcribed;color=#1E90FF;Name=rsbV;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538,BSGatlas-transcript-539,BSGatlas-transcript-540;comment="anti-anti-sigma factor (antagonist of RsbW)";go="GO:0006355 regulation of transcription, DNA-templated,GO:0045152 antisigma factor binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue";synonyms="rsbV";derives_from=BSGatlas-gene-571 basu168 BSGatlas gene 522414 522896 . + . ID=BSGatlas-gene-572;color=#1E90FF;Name=rsbW;locus_tag=BSU_04720,BSU04720 basu168 BSGatlas CDS 522414 522896 . + 0 ID=BSGatlas-gene-572_transcribed;color=#1E90FF;Name=rsbW;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538,BSGatlas-transcript-539,BSGatlas-transcript-540;comment="switch protein/serine kinase and anti-sigmafactor (inhibitory sigma-B binding protein)";ec="2.7.11.1";go="GO:0000166 nucleotide binding,GO:0004674 protein serine/threonine kinase activity,GO:0005524 ATP binding,GO:0006468 protein phosphorylation,GO:0006950 response to stress,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016989 sigma factor antagonist activity,GO:0045892 negative regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="rsbW";derives_from=BSGatlas-gene-572 basu168 BSGatlas gene 522862 523650 . + . ID=BSGatlas-gene-573;color=#1E90FF;Name=sigB;locus_tag=BSU_04730,BSU04730 basu168 BSGatlas CDS 522862 523650 . + 0 ID=BSGatlas-gene-573_transcribed;color=#1E90FF;Name=sigB;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538,BSGatlas-transcript-539,BSGatlas-transcript-540;comment="RNA polymerase sigma-37 factor (sigma(B))";go="GO:0000303 response to superoxide,GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006352 DNA-templated transcription, initiation,GO:0006355 regulation of transcription, DNA-templated,GO:0006950 response to stress,GO:0016987 sigma factor activity,GO:0042542 response to hydrogen peroxide,GO:0043620 regulation of DNA-templated transcription in response to stress";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.1 Transcription,SW 3.2.1.2 Sigma factors,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.1 Sigma factors,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="rpoF,sigB";derives_from=BSGatlas-gene-573 basu168 BSGatlas gene 523650 524249 . + . ID=BSGatlas-gene-574;color=#1E90FF;Name=rsbX;locus_tag=BSU_04740,BSU04740 basu168 BSGatlas CDS 523650 524249 . + 0 ID=BSGatlas-gene-574_transcribed;color=#1E90FF;Name=rsbX;Parent=BSGatlas-transcript-537,BSGatlas-transcript-538,BSGatlas-transcript-539,BSGatlas-transcript-540;comment="serine phosphatase";ec="3.1.3.3";go="GO:0003824 catalytic activity,GO:0004647 phosphoserine phosphatase activity,GO:0004721 phosphoprotein phosphatase activity,GO:0008152 metabolic process,GO:0009408 response to heat,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="rsbX";derives_from=BSGatlas-gene-574 basu168 BSGatlas UTR 524250 524297 . + . ID=BSGatlas-3'UTR-185;Parent=BSGatlas-transcript-538,BSGatlas-transcript-540;comment="3'UTR" basu168 BSGatlas transcript 524326 524476 . + . ID=BSGatlas-transcript-541;color=#FF9900;Parent=BSGatlas-gene-575;comment="Based on: BSGatlas" basu168 BSGatlas UTR 524326 524359 . + . ID=BSGatlas-5'UTR-326;Parent=BSGatlas-transcript-541;comment="5'UTR" basu168 BSGatlas gene 524360 524476 . + . ID=BSGatlas-gene-575;color=#1E90FF;locus_tag=BSU_04745 basu168 BSGatlas CDS 524360 524476 . + 0 ID=BSGatlas-gene-575_transcribed;color=#1E90FF;Parent=BSGatlas-transcript-541;comment="hypothetical protein";synonyms="BSU_04745,NA";derives_from=BSGatlas-gene-575 basu168 BSGatlas transcript 524492 525649 . + . ID=BSGatlas-transcript-542;color=#FF9900;Parent=BSGatlas-gene-576,BSGatlas-gene-577,BSGatlas-gene-579;comment="Based on: SubtiWiki" basu168 BSGatlas gene 524492 524785 . + . ID=BSGatlas-gene-576;color=#1E90FF;Name=ydcF;locus_tag=BSU_04750,BSU04750 basu168 BSGatlas CDS 524492 524785 . + 0 ID=BSGatlas-gene-576_transcribed;color=#1E90FF;Name=ydcF;Parent=BSGatlas-transcript-542;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydcF";derives_from=BSGatlas-gene-576 basu168 BSGatlas transcript 524782 525649 . + . ID=BSGatlas-transcript-543;color=#FF9900;Parent=BSGatlas-gene-577,BSGatlas-gene-579;comment="Based on: SubtiWiki" basu168 BSGatlas gene 524782 525222 . + . ID=BSGatlas-gene-577;color=#1E90FF;Name=ydcG;locus_tag=BSU_04760,BSU04760 basu168 BSGatlas CDS 524782 525222 . + 0 ID=BSGatlas-gene-577_transcribed;color=#1E90FF;Name=ydcG;Parent=BSGatlas-transcript-542,BSGatlas-transcript-543;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydcG";derives_from=BSGatlas-gene-577 basu168 BSGatlas gene 525021 528076 . - . ID=BSGatlas-gene-578;color=#8F1D1D;Name=S166;locus_tag=new_525021_528076_c basu168 BSGatlas transcript 525021 528076 . - . ID=BSGatlas-transcript-544;color=#B37924;Parent=BSGatlas-gene-581,BSGatlas-gene-578;comment="Based on: SubtiWiki" basu168 BSGatlas ncRNA 525021 528076 . - . ID=BSGatlas-gene-578_transcribed;color=#8F1D1D;Name=S166;Parent=BSGatlas-transcript-544;synonyms="S166";derives_from=BSGatlas-gene-578 basu168 BSGatlas gene 525206 525649 . + . ID=BSGatlas-gene-579;color=#1E90FF;Name=pamR;locus_tag=BSU_04770,BSU04770 basu168 BSGatlas CDS 525206 525649 . + 0 ID=BSGatlas-gene-579_transcribed;color=#1E90FF;Name=pamR;Parent=BSGatlas-transcript-542,BSGatlas-transcript-543;comment="putative transcriptional regulator";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="pamR,ydcH";derives_from=BSGatlas-gene-579 basu168 BSGatlas transcript 525697 527902 . + . ID=BSGatlas-transcript-545;color=#FF9900;Parent=BSGatlas-gene-580;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 525697 525742 . + . ID=BSGatlas-5'UTR-327;Parent=BSGatlas-transcript-545;comment="5'UTR" basu168 BSGatlas gene 525743 527902 . + . ID=BSGatlas-gene-580;color=#1E90FF;Name=ydcI;locus_tag=BSU_04780,BSU04780 basu168 BSGatlas CDS 525743 527902 . + 0 ID=BSGatlas-gene-580_transcribed;color=#1E90FF;Name=ydcI;Parent=BSGatlas-transcript-545;comment="RNA helicase transcriptional accessory protein";ec="EC-3.6.4.13";go="GO:0003676 nucleic acid binding,GO:0003723 RNA binding,GO:0006139 nucleobase-containing compound metabolic process,GO:0016788 hydrolase activity, acting on ester bonds";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.5 RNase/ based on similarity,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="ydcI";derives_from=BSGatlas-gene-580 basu168 BSGatlas transcript 527912 528581 . + . ID=BSGatlas-transcript-546;color=#FF9900;Parent=BSGatlas-gene-582;comment="Based on: BSGatlas" basu168 BSGatlas UTR 527912 528128 . + . ID=BSGatlas-5'UTR-328;Parent=BSGatlas-transcript-546;comment="5'UTR" basu168 BSGatlas gene 527912 528025 . - . ID=BSGatlas-gene-581;color=#3474B3;Name=cmpA;locus_tag=G8J2-20,BSU_04785 basu168 BSGatlas CDS 527912 528025 . - 0 ID=BSGatlas-gene-581_transcribed;color=#3474B3;Name=cmpA;Parent=BSGatlas-transcript-544;comment="factor allowing degradation of SpoIVA by ClpXP";go="GO:0034301 endospore formation";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.8 Not yet assigned";synonyms="cmpA";derives_from=BSGatlas-gene-581 basu168 BSGatlas gene 528129 528581 . + . ID=BSGatlas-gene-582;color=#1E90FF;Name=ydcK;locus_tag=BSU_04790,BSU04790 basu168 BSGatlas CDS 528129 528581 . + 0 ID=BSGatlas-gene-582_transcribed;color=#1E90FF;Name=ydcK;Parent=BSGatlas-transcript-546;comment="conserved protein of unknown function";go="GO:0005737 cytoplasm,GO:0008270 zinc ion binding,GO:0046872 metal ion binding";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydcK";derives_from=BSGatlas-gene-582 basu168 BSGatlas transcript 528616 528778 . + . ID=BSGatlas-transcript-547;color=#FF9900;Parent=BSGatlas-gene-583;comment="Based on: BSGatlas" basu168 BSGatlas UTR 528616 528702 . + . ID=BSGatlas-5'UTR-329;Parent=BSGatlas-transcript-547;comment="5'UTR" basu168 BSGatlas gene 528703 528778 . + . ID=BSGatlas-gene-583;color=#FFFF00;Name=trnS-Asn;locus_tag=BSU_tRNA_45,BSU_TRNA_45 basu168 BSGatlas tRNA 528703 528778 . + . ID=BSGatlas-gene-583_transcribed;color=#FFFF00;Name=trnS-Asn;Parent=BSGatlas-transcript-547;comment="tRNA-Asn";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnS-Asn";derives_from=BSGatlas-gene-583 basu168 BSGatlas gene 528782 528873 . + . ID=BSGatlas-gene-584;color=#FFFF00;Name=trnS-Ser;locus_tag=BSU_tRNA_46,BSU_TRNA_46 basu168 BSGatlas tRNA 528782 528873 . + . ID=BSGatlas-gene-584_transcribed;color=#FFFF00;Name=trnS-Ser;comment="tRNA-Ser";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnS-Ser";derives_from=BSGatlas-gene-584 basu168 BSGatlas gene 528902 528974 . + . ID=BSGatlas-gene-585;color=#FFFF00;Name=trnS-Glu;locus_tag=BSU_tRNA_47,BSU_TRNA_47 basu168 BSGatlas tRNA 528902 528974 . + . ID=BSGatlas-gene-585_transcribed;color=#FFFF00;Name=trnS-Glu;comment="tRNA-Glu";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnS-Glu";derives_from=BSGatlas-gene-585 basu168 BSGatlas gene 528985 529060 . + . ID=BSGatlas-gene-586;color=#FFFF00;Name=trnS-Gln;locus_tag=BSU_tRNA_48,BSU_TRNA_48 basu168 BSGatlas tRNA 528985 529060 . + . ID=BSGatlas-gene-586_transcribed;color=#FFFF00;Name=trnS-Gln;comment="tRNA-Gln";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnS-Gln";derives_from=BSGatlas-gene-586 basu168 BSGatlas gene 529086 529162 . + . ID=BSGatlas-gene-587;color=#FFFF00;Name=trnS-Lys;locus_tag=BSU_tRNA_49,BSU_TRNA_49 basu168 BSGatlas tRNA 529086 529162 . + . ID=BSGatlas-gene-587_transcribed;color=#FFFF00;Name=trnS-Lys;comment="tRNA-Lys";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="sup-3,trnS-Lys";derives_from=BSGatlas-gene-587 basu168 BSGatlas transcript 529173 529342 . + . ID=BSGatlas-transcript-549;color=#FF9900;Parent=BSGatlas-gene-588;comment="Based on: BSGatlas" basu168 BSGatlas gene 529173 529255 . + . ID=BSGatlas-gene-588;color=#FFFF00;Name=trnS-Leu1;locus_tag=BSU_tRNA_50,BSU_TRNA_50 basu168 BSGatlas tRNA 529173 529255 . + . ID=BSGatlas-gene-588_transcribed;color=#FFFF00;Name=trnS-Leu1;Parent=BSGatlas-transcript-549;comment="tRNA-Leu";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnS-Leu1";derives_from=BSGatlas-gene-588 basu168 BSGatlas UTR 529256 529342 . + . ID=BSGatlas-3'UTR-187;Parent=BSGatlas-transcript-549;comment="3'UTR" basu168 BSGatlas gene 529335 529422 . + . ID=BSGatlas-gene-589;color=#FFFF00;Name=trnS-Leu2;locus_tag=BSU_tRNA_51,BSU_TRNA_51 basu168 BSGatlas transcript 529335 529422 . + . ID=BSGatlas-transcript-550;color=#FF9900;Parent=BSGatlas-gene-589;comment="Based on: BSGatlas" basu168 BSGatlas tRNA 529335 529422 . + . ID=BSGatlas-gene-589_transcribed;color=#FFFF00;Name=trnS-Leu2;Parent=BSGatlas-transcript-550;comment="tRNA-Leu";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnS-Leu2";derives_from=BSGatlas-gene-589 basu168 BSGatlas transcript 529455 531554 . - . ID=BSGatlas-transcript-552;color=#B37924;Parent=BSGatlas-gene-592,BSGatlas-gene-591,BSGatlas-gene-590;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 529455 529504 . - . ID=BSGatlas-3'UTR-189;Parent=BSGatlas-transcript-552;comment="3'UTR" basu168 BSGatlas gene 529505 530611 . - . ID=BSGatlas-gene-590;color=#3474B3;Name=int;locus_tag=BSU_04800,BSU04800 basu168 BSGatlas CDS 529505 530611 . - 0 ID=BSGatlas-gene-590_transcribed;color=#3474B3;Name=int;Parent=BSGatlas-transcript-552;comment="ICEBs1 mobile element: integrase";go="GO:0003677 DNA binding,GO:0006310 DNA recombination,GO:0015074 DNA integration,GO:0046718 viral entry into host cell,GO:0070893 transposon integration,GO:0075713 establishment of integrated proviral latency";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="int,ydcL";derives_from=BSGatlas-gene-590 basu168 BSGatlas gene 530624 531133 . - . ID=BSGatlas-gene-591;color=#3474B3;Name=immA;locus_tag=BSU_04810,BSU04810 basu168 BSGatlas CDS 530624 531133 . - 0 ID=BSGatlas-gene-591_transcribed;color=#3474B3;Name=immA;Parent=BSGatlas-transcript-552;comment="ICEBs1 mobile element: site-specific proteasecleaving ImmR";go="GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008237 metallopeptidase activity,GO:0016787 hydrolase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.7 Proteolysis,SW 3.3.7.4 Additional proteins involved in proteolysis,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="immA,ydcM";derives_from=BSGatlas-gene-591 basu168 BSGatlas transcript 530914 531554 . - . ID=BSGatlas-transcript-553;color=#B37924;Parent=BSGatlas-gene-592;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 530914 531129 . - . ID=BSGatlas-3'UTR-190;Parent=BSGatlas-transcript-553;comment="3'UTR" basu168 BSGatlas gene 531130 531513 . - . ID=BSGatlas-gene-592;color=#3474B3;Name=immR;locus_tag=BSU_04820,BSU04820 basu168 BSGatlas CDS 531130 531513 . - 0 ID=BSGatlas-gene-592_transcribed;color=#3474B3;Name=immR;Parent=BSGatlas-transcript-552,BSGatlas-transcript-553;comment="ICEBs1 mobile element: transcriptional regulator(Xre family)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="immR,ydcN";derives_from=BSGatlas-gene-592 basu168 BSGatlas UTR 531514 531554 . - . ID=BSGatlas-5'UTR-330;Parent=BSGatlas-transcript-552,BSGatlas-transcript-553;comment="5'UTR" basu168 BSGatlas transcript 531740 545975 . + . ID=BSGatlas-transcript-556;color=#FF9900;Parent=BSGatlas-gene-593,BSGatlas-gene-594,BSGatlas-gene-595,BSGatlas-gene-597,BSGatlas-gene-598,BSGatlas-gene-599,BSGatlas-gene-600,BSGatlas-gene-601,BSGatlas-gene-602,BSGatlas-gene-603,BSGatlas-gene-604,BSGatlas-gene-605,BSGatlas-gene-606,BSGatlas-gene-607,BSGatlas-gene-608,BSGatlas-gene-609,BSGatlas-gene-610,BSGatlas-gene-611,BSGatlas-gene-612,BSGatlas-gene-613;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 531740 538049 . + . ID=BSGatlas-transcript-555;color=#FF9900;Parent=BSGatlas-gene-593,BSGatlas-gene-594,BSGatlas-gene-595,BSGatlas-gene-597,BSGatlas-gene-598,BSGatlas-gene-599,BSGatlas-gene-600,BSGatlas-gene-601,BSGatlas-gene-602,BSGatlas-gene-603,BSGatlas-gene-604,BSGatlas-gene-605;comment="Based on: BSGatlas" basu168 BSGatlas transcript 531740 534798 . + . ID=BSGatlas-transcript-554;color=#FF9900;Parent=BSGatlas-gene-593,BSGatlas-gene-594,BSGatlas-gene-595,BSGatlas-gene-597,BSGatlas-gene-598,BSGatlas-gene-599;comment="Based on: BSGatlas" basu168 BSGatlas UTR 531740 531786 . + . ID=BSGatlas-5'UTR-331;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556;comment="5'UTR" basu168 BSGatlas gene 531787 531981 . + . ID=BSGatlas-gene-593;color=#1E90FF;Name=xis;locus_tag=BSU_04830,BSU04830 basu168 BSGatlas CDS 531787 531981 . + 0 ID=BSGatlas-gene-593_transcribed;color=#1E90FF;Name=xis;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556;comment="ICEBs1 mobile element: excisionase";go="GO:0003677 DNA binding,GO:0006310 DNA recombination,GO:0015074 DNA integration";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="sacV,xis,ydzC";derives_from=BSGatlas-gene-593 basu168 BSGatlas gene 531978 532238 . + . ID=BSGatlas-gene-594;color=#1E90FF;Name=ydzL;locus_tag=BSU_04839,BSU04839 basu168 BSGatlas CDS 531978 532238 . + 0 ID=BSGatlas-gene-594_transcribed;color=#1E90FF;Name=ydzL;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556;comment="ICEBs1 mobile element: conserved protein ofunknown function";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzL";derives_from=BSGatlas-gene-594 basu168 BSGatlas UTR 532239 532291 . + . ID=BSGatlas-internal_UTR-176;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556;comment="internal_UTR" basu168 BSGatlas gene 532292 532552 . + . ID=BSGatlas-gene-595;color=#1E90FF;Name=ydcO;locus_tag=BSU_04840,BSU04840 basu168 BSGatlas CDS 532292 532552 . + 0 ID=BSGatlas-gene-595_transcribed;color=#1E90FF;Name=ydcO;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556;comment="ICEBs1 mobile element: conserved protein ofunknown function";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydcO";derives_from=BSGatlas-gene-595 basu168 BSGatlas UTR 532553 532757 . + . ID=BSGatlas-internal_UTR-177;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556;comment="internal_UTR" basu168 BSGatlas gene 532583 532642 . - . ID=BSGatlas-gene-596;color=#24B324;Name=sncO;locus_tag=BSU_misc_RNA_65,new_532412_532652_c basu168 BSGatlas transcript 532583 532642 . - . ID=BSGatlas-transcript-557;color=#B37924;Parent=BSGatlas-gene-596;comment="Based on: BSGatlas" basu168 BSGatlas sRNA 532583 532642 . - . ID=BSGatlas-gene-596_transcribed;color=#24B324;Name=sncO;Parent=BSGatlas-transcript-557;comment="ICEBs1 mobile element: conserved smalluntranslated RNA";synonyms="NA,S170,sncO";derives_from=BSGatlas-gene-596 basu168 BSGatlas transcript 532604 545975 . + . ID=BSGatlas-transcript-560;color=#FF9900;Parent=BSGatlas-gene-597,BSGatlas-gene-598,BSGatlas-gene-599,BSGatlas-gene-600,BSGatlas-gene-601,BSGatlas-gene-602,BSGatlas-gene-603,BSGatlas-gene-604,BSGatlas-gene-605,BSGatlas-gene-606,BSGatlas-gene-607,BSGatlas-gene-608,BSGatlas-gene-609,BSGatlas-gene-610,BSGatlas-gene-611,BSGatlas-gene-612,BSGatlas-gene-613;comment="Based on: BSGatlas" basu168 BSGatlas transcript 532604 538049 . + . ID=BSGatlas-transcript-559;color=#FF9900;Parent=BSGatlas-gene-597,BSGatlas-gene-598,BSGatlas-gene-599,BSGatlas-gene-600,BSGatlas-gene-601,BSGatlas-gene-602,BSGatlas-gene-603,BSGatlas-gene-604,BSGatlas-gene-605;comment="Based on: BSGatlas" basu168 BSGatlas transcript 532604 534798 . + . ID=BSGatlas-transcript-558;color=#FF9900;Parent=BSGatlas-gene-597,BSGatlas-gene-598,BSGatlas-gene-599;comment="Based on: BSGatlas" basu168 BSGatlas UTR 532604 532757 . + . ID=BSGatlas-5'UTR-332;Parent=BSGatlas-transcript-558,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="5'UTR" basu168 BSGatlas gene 532758 532886 . + . ID=BSGatlas-gene-597;color=#1E90FF;locus_tag=BSU_04849 basu168 BSGatlas CDS 532758 532886 . + 0 ID=BSGatlas-gene-597_transcribed;color=#1E90FF;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-558,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: hypothetical protein";synonyms="BSU_04849,NA";derives_from=BSGatlas-gene-597 basu168 BSGatlas UTR 532887 532921 . + . ID=BSGatlas-internal_UTR-178;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-558,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="internal_UTR" basu168 BSGatlas gene 532922 533302 . + . ID=BSGatlas-gene-598;color=#1E90FF;Name=ydcP;locus_tag=BSU_04850,BSU04850 basu168 BSGatlas CDS 532922 533302 . + 0 ID=BSGatlas-gene-598_transcribed;color=#1E90FF;Name=ydcP;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-558,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: helicase processivityfactor";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="ydcP";derives_from=BSGatlas-gene-598 basu168 BSGatlas UTR 533303 533337 . + . ID=BSGatlas-internal_UTR-179;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-558,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="internal_UTR" basu168 BSGatlas gene 533338 534780 . + . ID=BSGatlas-gene-599;color=#1E90FF;Name=ydcQ;locus_tag=BSU_04860,BSU04860 basu168 BSGatlas CDS 533338 534780 . + 0 ID=BSGatlas-gene-599_transcribed;color=#1E90FF;Name=ydcQ;Parent=BSGatlas-transcript-554,BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-558,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: coupling conjugationprotein VirD4";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007049 cell cycle,GO:0007059 chromosome segregation,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0051301 cell division";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="conQ,ydcQ";derives_from=BSGatlas-gene-599 basu168 BSGatlas gene 534773 535831 . + . ID=BSGatlas-gene-600;color=#1E90FF;Name=nicK;locus_tag=BSU_04870,BSU04870 basu168 BSGatlas CDS 534773 535831 . + 0 ID=BSGatlas-gene-600_transcribed;color=#1E90FF;Name=nicK;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: DNA relaxase";go="GO:0000746 conjugation,GO:0003677 DNA binding,GO:0003916 DNA topoisomerase activity,GO:0006270 DNA replication initiation,GO:0015074 DNA integration";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="nicK,ydcR";derives_from=BSGatlas-gene-600 basu168 BSGatlas UTR 534781 534798 . + . ID=BSGatlas-3'UTR-191;Parent=BSGatlas-transcript-554,BSGatlas-transcript-558;comment="3'UTR" basu168 BSGatlas UTR 535832 535878 . + . ID=BSGatlas-internal_UTR-180;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="internal_UTR" basu168 BSGatlas gene 535879 535933 . + . ID=BSGatlas-gene-601;color=#00FF00;Name=Bacillus-plasmid basu168 BSGatlas sRNA 535879 535933 . + . ID=BSGatlas-gene-601_transcribed;color=#00FF00;Name=Bacillus-plasmid;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;derives_from=BSGatlas-gene-601 basu168 BSGatlas UTR 535934 536095 . + . ID=BSGatlas-internal_UTR-181;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="internal_UTR" basu168 BSGatlas gene 536096 536365 . + . ID=BSGatlas-gene-602;color=#1E90FF;Name=ydcS;locus_tag=BSU_04880,BSU04880 basu168 BSGatlas CDS 536096 536365 . + 0 ID=BSGatlas-gene-602_transcribed;color=#1E90FF;Name=ydcS;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: conserved protein ofunknown function";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydcS";derives_from=BSGatlas-gene-602 basu168 BSGatlas UTR 536366 536403 . + . ID=BSGatlas-internal_UTR-182;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="internal_UTR" basu168 BSGatlas gene 536404 536670 . + . ID=BSGatlas-gene-603;color=#1E90FF;Name=ydcT;locus_tag=BSU_04890,BSU04890 basu168 BSGatlas CDS 536404 536670 . + 0 ID=BSGatlas-gene-603_transcribed;color=#1E90FF;Name=ydcT;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: conserved protein ofunknown function";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydcT";derives_from=BSGatlas-gene-603 basu168 BSGatlas UTR 536671 536686 . + . ID=BSGatlas-internal_UTR-183;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="internal_UTR" basu168 BSGatlas gene 536687 536995 . + . ID=BSGatlas-gene-604;color=#1E90FF;Name=yddA;locus_tag=BSU_04900,BSU04900 basu168 BSGatlas CDS 536687 536995 . + 0 ID=BSGatlas-gene-604_transcribed;color=#1E90FF;Name=yddA;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: conserved protein ofunknown function";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yddA";derives_from=BSGatlas-gene-604 basu168 BSGatlas gene 536985 538049 . + . ID=BSGatlas-gene-605;color=#1E90FF;Name=conB;locus_tag=BSU_04910,BSU04910 basu168 BSGatlas CDS 536985 538049 . + 0 ID=BSGatlas-gene-605_transcribed;color=#1E90FF;Name=conB;Parent=BSGatlas-transcript-555,BSGatlas-transcript-556,BSGatlas-transcript-559,BSGatlas-transcript-560;comment="ICEBs1 mobile element: subunit of theconjugation machinery VirB8";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="conB,yddB";derives_from=BSGatlas-gene-605 basu168 BSGatlas transcript 537526 545975 . + . ID=BSGatlas-transcript-561;color=#FF9900;Parent=BSGatlas-gene-606,BSGatlas-gene-607,BSGatlas-gene-608,BSGatlas-gene-609,BSGatlas-gene-610,BSGatlas-gene-611,BSGatlas-gene-612,BSGatlas-gene-613;comment="Based on: BSGatlas" basu168 BSGatlas UTR 537526 538060 . + . ID=BSGatlas-5'UTR-333;Parent=BSGatlas-transcript-561;comment="5'UTR" basu168 BSGatlas gene 538061 538309 . + . ID=BSGatlas-gene-606;color=#1E90FF;Name=conC;locus_tag=BSU_04920,BSU04920 basu168 BSGatlas CDS 538061 538309 . + 0 ID=BSGatlas-gene-606_transcribed;color=#1E90FF;Name=conC;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="ICEBs1 mobile element: subunit of theconjugation machinery";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="conC,yddC";derives_from=BSGatlas-gene-606 basu168 BSGatlas gene 538322 538846 . + . ID=BSGatlas-gene-607;color=#1E90FF;Name=conD;locus_tag=BSU_04930,BSU04930 basu168 BSGatlas CDS 538322 538846 . + 0 ID=BSGatlas-gene-607_transcribed;color=#1E90FF;Name=conD;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="ICEBs1 mobile element: subunit of theconjugation machinery";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="conD,yddD";derives_from=BSGatlas-gene-607 basu168 BSGatlas gene 538734 541229 . + . ID=BSGatlas-gene-608;color=#1E90FF;Name=conE;locus_tag=BSU_04940,BSU04940 basu168 BSGatlas CDS 538734 541229 . + 0 ID=BSGatlas-gene-608_transcribed;color=#1E90FF;Name=conE;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="ICEBs1 mobile element: VirB4-like ATPase";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0009291 unidirectional conjugation,GO:0060187 cell pole";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="conE,yddE";derives_from=BSGatlas-gene-608 basu168 BSGatlas UTR 541230 541247 . + . ID=BSGatlas-internal_UTR-184;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="internal_UTR" basu168 BSGatlas gene 541248 541574 . + . ID=BSGatlas-gene-609;color=#1E90FF;Name=yddF;locus_tag=BSU_04950,BSU04950 basu168 BSGatlas CDS 541248 541574 . + 0 ID=BSGatlas-gene-609_transcribed;color=#1E90FF;Name=yddF;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="ICEBs1 mobile element: conserved protein ofunknown function";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yddF";derives_from=BSGatlas-gene-609 basu168 BSGatlas gene 541578 544025 . + . ID=BSGatlas-gene-610;color=#1E90FF;Name=conG;locus_tag=BSU_04960,BSU04960 basu168 BSGatlas CDS 541578 544025 . + 0 ID=BSGatlas-gene-610_transcribed;color=#1E90FF;Name=conG;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="ICEBs1 mobile element: VirB6 subunit of theconjugation machinery";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="conG,yddG";derives_from=BSGatlas-gene-610 basu168 BSGatlas gene 544022 545011 . + . ID=BSGatlas-gene-611;color=#1E90FF;Name=cwlT;locus_tag=BSU_04970,BSU04970 basu168 BSGatlas CDS 544022 545011 . + 0 ID=BSGatlas-gene-611_transcribed;color=#1E90FF;Name=cwlT;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="ICEBs1 mobile element: two-domain autolysin withN-acetylmuramidase and DL-endopeptidase activity VirB1";ec="EC-3.2.1.92";go="GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008234 cysteine-type peptidase activity,GO:0009253 peptidoglycan catabolic process,GO:0016787 hydrolase activity,GO:0033922 peptidoglycan beta-N-acetylmuramidase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.3 Cell wall degradation/ turnover,SW 1.1.3.1 Autolysis,SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="cwlT,yddH";derives_from=BSGatlas-gene-611 basu168 BSGatlas gene 545026 545532 . + . ID=BSGatlas-gene-612;color=#1E90FF;Name=yddI;locus_tag=BSU_04980,BSU04980 basu168 BSGatlas CDS 545026 545532 . + 0 ID=BSGatlas-gene-612_transcribed;color=#1E90FF;Name=yddI;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="ICEBs1 mobile element: conserved protein ofunknown function";go="GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yddI";derives_from=BSGatlas-gene-612 basu168 BSGatlas UTR 545533 545594 . + . ID=BSGatlas-internal_UTR-185;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561;comment="internal_UTR" basu168 BSGatlas transcript 545564 545975 . + . ID=BSGatlas-transcript-562;color=#FF9900;Parent=BSGatlas-gene-613;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 545564 545594 . + . ID=BSGatlas-5'UTR-334;Parent=BSGatlas-transcript-562;comment="5'UTR" basu168 BSGatlas gene 545595 545975 . + . ID=BSGatlas-gene-613;color=#1E90FF;Name=yddJ;locus_tag=BSU_04990,BSU04990 basu168 BSGatlas CDS 545595 545975 . + 0 ID=BSGatlas-gene-613_transcribed;color=#1E90FF;Name=yddJ;Parent=BSGatlas-transcript-556,BSGatlas-transcript-560,BSGatlas-transcript-561,BSGatlas-transcript-562;comment="ICEBs1 mobile element: putative lipoprotein ofunknown function";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yddJ";derives_from=BSGatlas-gene-613 basu168 BSGatlas transcript 546006 547029 . - . ID=BSGatlas-transcript-563;color=#B37924;Parent=BSGatlas-gene-614;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 546006 546165 . - . ID=BSGatlas-3'UTR-192;Parent=BSGatlas-transcript-563;comment="3'UTR" basu168 BSGatlas transcript 546072 547029 . - . ID=BSGatlas-transcript-4928;color=#B37924;Parent=BSGatlas-gene-614;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 546072 546165 . - . ID=BSGatlas-3'UTR-1643;Parent=BSGatlas-transcript-4928;comment="3'UTR" basu168 BSGatlas gene 546166 546966 . - . ID=BSGatlas-gene-614;color=#3474B3;Name=yddK;locus_tag=BSU_05000,BSU05000 basu168 BSGatlas CDS 546166 546966 . - 0 ID=BSGatlas-gene-614_transcribed;color=#3474B3;Name=yddK;Parent=BSGatlas-transcript-563,BSGatlas-transcript-4928;comment="ICEBs1 mobile element: conserved protein ofunknown function";go="GO:0007165 signal transduction";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yddK";derives_from=BSGatlas-gene-614 basu168 BSGatlas UTR 546967 547029 . - . ID=BSGatlas-5'UTR-335;Parent=BSGatlas-transcript-563,BSGatlas-transcript-4928;comment="5'UTR" basu168 BSGatlas transcript 547306 548625 . + . ID=BSGatlas-transcript-565;color=#FF9900;Parent=BSGatlas-gene-615,BSGatlas-gene-616;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 547306 548577 . + . ID=BSGatlas-transcript-564;color=#FF9900;Parent=BSGatlas-gene-615,BSGatlas-gene-616;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 547306 548481 . + . ID=BSGatlas-gene-615;color=#1E90FF;Name=rapI;locus_tag=BSU_05010,BSU05010 basu168 BSGatlas CDS 547306 548481 . + 0 ID=BSGatlas-gene-615_transcribed;color=#1E90FF;Name=rapI;Parent=BSGatlas-transcript-564,BSGatlas-transcript-565;comment="ICEBs1 mobile element: response regulatoraspartate phosphatase";ec="3.1.-.-";go="GO:0004721 phosphoprotein phosphatase activity,GO:0008152 metabolic process,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.2 Response regulator aspartate phosphatase,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 3.4.8 Quorum sensing,SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1";synonyms="rapI,yddL";derives_from=BSGatlas-gene-615 basu168 BSGatlas transcript 548192 548625 . + . ID=BSGatlas-transcript-567;color=#FF9900;Parent=BSGatlas-gene-616;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 548192 548577 . + . ID=BSGatlas-transcript-566;color=#FF9900;Parent=BSGatlas-gene-616;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 548192 548437 . + . ID=BSGatlas-5'UTR-336;Parent=BSGatlas-transcript-566,BSGatlas-transcript-567;comment="5'UTR" basu168 BSGatlas transcript 548334 548625 . + . ID=BSGatlas-transcript-569;color=#FF9900;Parent=BSGatlas-gene-616;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 548334 548577 . + . ID=BSGatlas-transcript-568;color=#FF9900;Parent=BSGatlas-gene-616;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 548334 548437 . + . ID=BSGatlas-5'UTR-337;Parent=BSGatlas-transcript-568,BSGatlas-transcript-569;comment="5'UTR" basu168 BSGatlas transcript 548395 548625 . + . ID=BSGatlas-transcript-571;color=#FF9900;Parent=BSGatlas-gene-616;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 548395 548577 . + . ID=BSGatlas-transcript-570;color=#FF9900;Parent=BSGatlas-gene-616;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 548395 548437 . + . ID=BSGatlas-5'UTR-338;Parent=BSGatlas-transcript-570,BSGatlas-transcript-571;comment="5'UTR" basu168 BSGatlas gene 548438 548557 . + . ID=BSGatlas-gene-616;color=#1E90FF;Name=phrI;locus_tag=BSU_05020,BSU05020 basu168 BSGatlas CDS 548438 548557 . + 0 ID=BSGatlas-gene-616_transcribed;color=#1E90FF;Name=phrI;Parent=BSGatlas-transcript-564,BSGatlas-transcript-565,BSGatlas-transcript-566,BSGatlas-transcript-567,BSGatlas-transcript-568,BSGatlas-transcript-569,BSGatlas-transcript-570,BSGatlas-transcript-571;comment="ICEBs1 mobile element: secreted regulator of theactivity of phosphatase RapI";go="GO:0000757 NA";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.7 Control of transcription factor (other than two-component system),SW 3.4.8 Quorum sensing,SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.8 Short peptides";synonyms="phrI";derives_from=BSGatlas-gene-616 basu168 BSGatlas UTR 548558 548625 . + . ID=BSGatlas-3'UTR-194;Parent=BSGatlas-transcript-565,BSGatlas-transcript-567,BSGatlas-transcript-569,BSGatlas-transcript-571;comment="3'UTR" basu168 BSGatlas UTR 548558 548577 . + . ID=BSGatlas-3'UTR-193;Parent=BSGatlas-transcript-564,BSGatlas-transcript-566,BSGatlas-transcript-568,BSGatlas-transcript-570;comment="3'UTR" basu168 BSGatlas gene 548710 549651 . + . ID=BSGatlas-gene-617;color=#1E90FF;Name=yddM;locus_tag=BSU_05030,BSU05030 basu168 BSGatlas CDS 548710 549651 . + 0 ID=BSGatlas-gene-617_transcribed;color=#1E90FF;Name=yddM;comment="ICEBs1 mobile element: putative helicase";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.1 ICEBs1,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yddM";derives_from=BSGatlas-gene-617 basu168 BSGatlas gene 550240 551259 . - . ID=BSGatlas-gene-618;color=#3474B3;Name=yddN;locus_tag=BSU_05040,BSU05040 basu168 BSGatlas transcript 550240 551259 . - . ID=BSGatlas-transcript-4929;color=#B37924;Parent=BSGatlas-gene-618;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas CDS 550240 551259 . - 0 ID=BSGatlas-gene-618_transcribed;color=#3474B3;Name=yddN;Parent=BSGatlas-transcript-4929;comment="putative alkanal monooxygenase";ec="1.14.14.-";go="GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yddN";derives_from=BSGatlas-gene-618 basu168 BSGatlas transcript 551073 551978 . + . ID=BSGatlas-transcript-575;color=#FF9900;Parent=BSGatlas-gene-619;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 551073 551518 . + . ID=BSGatlas-5'UTR-339;Parent=BSGatlas-transcript-575;comment="5'UTR" basu168 BSGatlas gene 551519 551929 . + . ID=BSGatlas-gene-619;color=#1E90FF;Name=lrpA;locus_tag=BSU_05050,BSU05050 basu168 BSGatlas CDS 551519 551929 . + 0 ID=BSGatlas-gene-619_transcribed;color=#1E90FF;Name=lrpA;Parent=BSGatlas-transcript-575;comment="transcriptional regulator (Lrp/AsnC family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 3.4.7 phosphorelay,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay";synonyms="lrpA,yddO";derives_from=BSGatlas-gene-619 basu168 BSGatlas UTR 551930 551978 . + . ID=BSGatlas-3'UTR-198;Parent=BSGatlas-transcript-575;comment="3'UTR" basu168 BSGatlas gene 552052 552501 . - . ID=BSGatlas-gene-620;color=#3474B3;Name=lrpB;locus_tag=BSU_05060,BSU05060 basu168 BSGatlas transcript 552052 552501 . - . ID=BSGatlas-transcript-576;color=#B37924;Parent=BSGatlas-gene-620;comment="Based on: BsubCyc" basu168 BSGatlas CDS 552052 552501 . - 0 ID=BSGatlas-gene-620_transcribed;color=#3474B3;Name=lrpB;Parent=BSGatlas-transcript-576;comment="transcriptional regulator (Lrp/AsnC family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 3.4.7 phosphorelay,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay";synonyms="lrpB,yddP";derives_from=BSGatlas-gene-620 basu168 BSGatlas gene 552616 553158 . + . ID=BSGatlas-gene-621;color=#1E90FF;Name=yddQ;locus_tag=BSU_05070,BSU05070 basu168 BSGatlas CDS 552616 553158 . + 0 ID=BSGatlas-gene-621_transcribed;color=#1E90FF;Name=yddQ;comment="putative hydrolase";ec="3.-.-.-";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yddQ";derives_from=BSGatlas-gene-621 basu168 BSGatlas transcript 553661 554475 . + . ID=BSGatlas-transcript-577;color=#FF9900;Parent=BSGatlas-gene-622;comment="Based on: BSGatlas" basu168 BSGatlas UTR 553661 553710 . + . ID=BSGatlas-5'UTR-340;Parent=BSGatlas-transcript-577;comment="5'UTR" basu168 BSGatlas gene 553711 554475 . + . ID=BSGatlas-gene-622;color=#1E90FF;Name=yddR;locus_tag=BSU_05080,BSU05080 basu168 BSGatlas CDS 553711 554475 . + 0 ID=BSGatlas-gene-622_transcribed;color=#1E90FF;Name=yddR;Parent=BSGatlas-transcript-577;comment="putative metal-dependent hydrolase";ec="3.-.-.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yddR";derives_from=BSGatlas-gene-622 basu168 BSGatlas gene 554669 555979 . + . ID=BSGatlas-gene-623;color=#1E90FF;Name=yddS;locus_tag=BSU_05090,BSU05090 basu168 BSGatlas CDS 554669 555979 . + 0 ID=BSGatlas-gene-623_transcribed;color=#1E90FF;Name=yddS;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0022857 transmembrane transporter activity,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yddS";derives_from=BSGatlas-gene-623 basu168 BSGatlas gene 556562 556738 . + . ID=BSGatlas-gene-624;color=#1E90FF;Name=ydzM;locus_tag=BSU_05099,BSU05099 basu168 BSGatlas CDS 556562 556738 . + 0 ID=BSGatlas-gene-624_transcribed;color=#1E90FF;Name=ydzM;comment="conserved phage protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzM";derives_from=BSGatlas-gene-624 basu168 BSGatlas gene 556763 557449 . + . ID=BSGatlas-gene-625;color=#1E90FF;Name=yddT;locus_tag=BSU_05100,BSU05100 basu168 BSGatlas transcript 556763 557449 . + . ID=BSGatlas-transcript-579;color=#FF9900;Parent=BSGatlas-gene-625;comment="Based on: SubtiWiki" basu168 BSGatlas CDS 556763 557449 . + 0 ID=BSGatlas-gene-625_transcribed;color=#1E90FF;Name=yddT;Parent=BSGatlas-transcript-579;comment="putative exported phage protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yddT";derives_from=BSGatlas-gene-625 basu168 BSGatlas transcript 557818 558079 . + . ID=BSGatlas-transcript-580;color=#FF9900;Parent=BSGatlas-gene-626;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 557818 557872 . + . ID=BSGatlas-5'UTR-342;Parent=BSGatlas-transcript-580;comment="5'UTR" basu168 BSGatlas gene 557873 558058 . + . ID=BSGatlas-gene-626;color=#1E90FF;Name=ydzN;locus_tag=BSU_05109,BSU05109 basu168 BSGatlas CDS 557873 558058 . + 0 ID=BSGatlas-gene-626_transcribed;color=#1E90FF;Name=ydzN;Parent=BSGatlas-transcript-580;comment="hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzN";derives_from=BSGatlas-gene-626 basu168 BSGatlas UTR 558059 558079 . + . ID=BSGatlas-3'UTR-199;Parent=BSGatlas-transcript-580;comment="3'UTR" basu168 BSGatlas gene 558408 559001 . + . ID=BSGatlas-gene-627;color=#1E90FF;Name=ydeA;locus_tag=BSU_05110,BSU05110 basu168 BSGatlas CDS 558408 559001 . + 0 ID=BSGatlas-gene-627_transcribed;color=#1E90FF;Name=ydeA;comment="glyoxalase III homolog, deglycase";ec="EC-4.2.1.130";go="GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0016787 hydrolase activity,GO:0051596 methylglyoxal catabolic process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="ydeA";derives_from=BSGatlas-gene-627 basu168 BSGatlas transcript 559146 559490 . + . ID=BSGatlas-transcript-582;color=#FF9900;Parent=BSGatlas-gene-629;comment="Based on: BSGatlas" basu168 BSGatlas transcript 559146 559464 . + . ID=BSGatlas-transcript-581;color=#FF9900;Parent=BSGatlas-gene-629;comment="Based on: BSGatlas" basu168 BSGatlas UTR 559146 559263 . + . ID=BSGatlas-5'UTR-343;Parent=BSGatlas-transcript-581,BSGatlas-transcript-582;comment="5'UTR" basu168 BSGatlas gene 559182 559512 . + . ID=BSGatlas-gene-628;color=#999999;Name=cspA basu168 BSGatlas transcript 559182 559512 . + . ID=BSGatlas-transcript-584;color=#FF9900;Parent=BSGatlas-gene-628,BSGatlas-gene-629;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 559182 559512 . + . ID=BSGatlas-transcript-585;color=#FF9900;Parent=BSGatlas-gene-628,BSGatlas-gene-629;comment="Based on: SubtiWiki" basu168 BSGatlas riboswitch 559182 559512 . + . ID=BSGatlas-gene-628_transcribed;color=#999999;Name=cspA;Parent=BSGatlas-transcript-584,BSGatlas-transcript-585;derives_from=BSGatlas-gene-628 basu168 BSGatlas gene 559264 559464 . + . ID=BSGatlas-gene-629;color=#1E90FF;Name=cspC;locus_tag=BSU_05120,BSU05120 basu168 BSGatlas CDS 559264 559464 . + 0 ID=BSGatlas-gene-629_transcribed;color=#1E90FF;Name=cspC;Parent=BSGatlas-transcript-581,BSGatlas-transcript-582,BSGatlas-transcript-584,BSGatlas-transcript-585;comment="cold-shock protein";go="GO:0003676 nucleic acid binding,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0006950 response to stress";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.2 RNA chaperones,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.5 Cold stress proteins";synonyms="cspC";derives_from=BSGatlas-gene-629 basu168 BSGatlas UTR 559465 559490 . + . ID=BSGatlas-3'UTR-202;Parent=BSGatlas-transcript-582,BSGatlas-transcript-584;comment="3'UTR" basu168 BSGatlas gene 559532 559610 . - . ID=BSGatlas-gene-630;color=#8F1D1D;Name=sncZ;locus_tag=BSU_misc_RNA_66 basu168 BSGatlas ncRNA 559532 559610 . - . ID=BSGatlas-gene-630_transcribed;color=#8F1D1D;Name=sncZ;comment="putative small conserved untranslated RNA";synonyms="NA,sncZ";derives_from=BSGatlas-gene-630 basu168 BSGatlas gene 559893 559980 . + . ID=BSGatlas-gene-631;color=#00FF00;Name=BsrC basu168 BSGatlas sRNA 559893 559980 . + . ID=BSGatlas-gene-631_transcribed;color=#00FF00;Name=BsrC;derives_from=BSGatlas-gene-631 basu168 BSGatlas transcript 560151 560664 . - . ID=BSGatlas-transcript-587;color=#B37924;Parent=BSGatlas-gene-632;comment="Based on: SubtiWiki" basu168 BSGatlas gene 560151 560612 . - . ID=BSGatlas-gene-632;color=#3474B3;Name=ydeB;locus_tag=BSU_05130,BSU05130 basu168 BSGatlas CDS 560151 560612 . - 0 ID=BSGatlas-gene-632_transcribed;color=#3474B3;Name=ydeB;Parent=BSGatlas-transcript-587;comment="transcriptional regulator for repair andoutgrowth of heat damaged spores";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydeB";derives_from=BSGatlas-gene-632 basu168 BSGatlas UTR 560613 560664 . - . ID=BSGatlas-5'UTR-344;Parent=BSGatlas-transcript-587;comment="5'UTR" basu168 BSGatlas gene 560621 561166 . + . ID=BSGatlas-gene-633;color=#CC0000;Name=S181;locus_tag=new_560621_561166 basu168 BSGatlas transcript 560621 561166 . + . ID=BSGatlas-transcript-588;color=#FF9900;Parent=BSGatlas-gene-633;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 560621 561166 . + . ID=BSGatlas-gene-633_transcribed;color=#CC0000;Name=S181;Parent=BSGatlas-transcript-588;synonyms="S181";derives_from=BSGatlas-gene-633 basu168 BSGatlas transcript 561180 562523 . - . ID=BSGatlas-transcript-589;color=#B37924;Parent=BSGatlas-gene-635,BSGatlas-gene-634;comment="Based on: SubtiWiki" basu168 BSGatlas gene 561180 561416 . - . ID=BSGatlas-gene-634;color=#3474B3;Name=ydzE;locus_tag=BSU_05140,BSU05140 basu168 BSGatlas CDS 561180 561416 . - 0 ID=BSGatlas-gene-634_transcribed;color=#3474B3;Name=ydzE;Parent=BSGatlas-transcript-589;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzE";derives_from=BSGatlas-gene-634 basu168 BSGatlas UTR 561417 561513 . - . ID=BSGatlas-internal_UTR-186;Parent=BSGatlas-transcript-589;comment="internal_UTR" basu168 BSGatlas gene 561514 562389 . - . ID=BSGatlas-gene-635;color=#3474B3;Name=ydeC;locus_tag=BSU_05150,BSU05150 basu168 BSGatlas CDS 561514 562389 . - 0 ID=BSGatlas-gene-635_transcribed;color=#3474B3;Name=ydeC;Parent=BSGatlas-transcript-589;comment="putative transcriptional regulator (AraC/XylSfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="ydeC";derives_from=BSGatlas-gene-635 basu168 BSGatlas UTR 562390 562523 . - . ID=BSGatlas-5'UTR-345;Parent=BSGatlas-transcript-589;comment="5'UTR" basu168 BSGatlas gene 562502 563461 . + . ID=BSGatlas-gene-636;color=#1E90FF;Name=ydeD;locus_tag=BSU_05160,BSU05160 basu168 BSGatlas transcript 562502 563461 . + . ID=BSGatlas-transcript-590;color=#FF9900;Parent=BSGatlas-gene-636;comment="Based on: BsubCyc" basu168 BSGatlas CDS 562502 563461 . + 0 ID=BSGatlas-gene-636_transcribed;color=#1E90FF;Name=ydeD;Parent=BSGatlas-transcript-590;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydeD";derives_from=BSGatlas-gene-636 basu168 BSGatlas transcript 563614 564591 . - . ID=BSGatlas-transcript-591;color=#B37924;Parent=BSGatlas-gene-637;comment="Based on: BsubCyc" basu168 BSGatlas gene 563614 564486 . - . ID=BSGatlas-gene-637;color=#3474B3;Name=ydeE;locus_tag=BSU_05170,BSU05170 basu168 BSGatlas CDS 563614 564486 . - 0 ID=BSGatlas-gene-637_transcribed;color=#3474B3;Name=ydeE;Parent=BSGatlas-transcript-591;comment="putative transcriptional regulator (AraC/XylSfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydeE";derives_from=BSGatlas-gene-637 basu168 BSGatlas UTR 564487 564591 . - . ID=BSGatlas-5'UTR-346;Parent=BSGatlas-transcript-591;comment="5'UTR" basu168 BSGatlas transcript 564674 566101 . + . ID=BSGatlas-transcript-592;color=#FF9900;Parent=BSGatlas-gene-638;comment="Based on: BSGatlas" basu168 BSGatlas UTR 564674 564712 . + . ID=BSGatlas-5'UTR-347;Parent=BSGatlas-transcript-592;comment="5'UTR" basu168 BSGatlas gene 564713 566101 . + . ID=BSGatlas-gene-638;color=#1E90FF;Name=ydeF;locus_tag=BSU_05180,BSU05180 basu168 BSGatlas CDS 564713 566101 . + 0 ID=BSGatlas-gene-638_transcribed;color=#1E90FF;Name=ydeF;Parent=BSGatlas-transcript-592;comment="putative PLP-dependent transcriptionalregulator";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0003824 catalytic activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0008483 transaminase activity,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0030170 pyridoxal phosphate binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydeF";derives_from=BSGatlas-gene-638 basu168 BSGatlas gene 566211 567503 . + . ID=BSGatlas-gene-639;color=#1E90FF;Name=ydeG;locus_tag=BSU_05190,BSU05190 basu168 BSGatlas CDS 566211 567503 . + 0 ID=BSGatlas-gene-639_transcribed;color=#1E90FF;Name=ydeG;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydeG";derives_from=BSGatlas-gene-639 basu168 BSGatlas transcript 567540 568159 . + . ID=BSGatlas-transcript-593;color=#FF9900;Parent=BSGatlas-gene-640;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 567540 567661 . + . ID=BSGatlas-5'UTR-348;Parent=BSGatlas-transcript-593;comment="5'UTR" basu168 BSGatlas gene 567662 568108 . + . ID=BSGatlas-gene-640;color=#1E90FF;Name=ydeH;locus_tag=BSU_05200,BSU05200 basu168 BSGatlas CDS 567662 568108 . + 0 ID=BSGatlas-gene-640_transcribed;color=#1E90FF;Name=ydeH;Parent=BSGatlas-transcript-593;comment="putative integral inner membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydeH";derives_from=BSGatlas-gene-640 basu168 BSGatlas UTR 568109 568159 . + . ID=BSGatlas-3'UTR-203;Parent=BSGatlas-transcript-593;comment="3'UTR" basu168 BSGatlas transcript 568211 569003 . + . ID=BSGatlas-transcript-594;color=#FF9900;Parent=BSGatlas-gene-641;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 568211 568344 . + . ID=BSGatlas-5'UTR-349;Parent=BSGatlas-transcript-594;comment="5'UTR" basu168 BSGatlas gene 568345 568938 . + . ID=BSGatlas-gene-641;color=#1E90FF;Name=ydeI;locus_tag=BSU_05210,BSU05210 basu168 BSGatlas CDS 568345 568938 . + 0 ID=BSGatlas-gene-641_transcribed;color=#1E90FF;Name=ydeI;Parent=BSGatlas-transcript-594;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydeI";derives_from=BSGatlas-gene-641 basu168 BSGatlas UTR 568939 569003 . + . ID=BSGatlas-3'UTR-204;Parent=BSGatlas-transcript-594;comment="3'UTR" basu168 BSGatlas transcript 569290 570005 . - . ID=BSGatlas-transcript-4930;color=#B37924;Parent=BSGatlas-gene-642;comment="Based on: SubtiWiki" basu168 BSGatlas gene 569290 569949 . - . ID=BSGatlas-gene-642;color=#3474B3;Name=ydeJ;locus_tag=BSU_05220,BSU05220 basu168 BSGatlas CDS 569290 569949 . - 0 ID=BSGatlas-gene-642_transcribed;color=#3474B3;Name=ydeJ;Parent=BSGatlas-transcript-4930;comment="putative lipoprotein";go="GO:0005886 plasma membrane,GO:0016020 membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydeJ";derives_from=BSGatlas-gene-642 basu168 BSGatlas UTR 569950 570005 . - . ID=BSGatlas-5'UTR-350;Parent=BSGatlas-transcript-4930;comment="5'UTR" basu168 BSGatlas transcript 570371 571323 . - . ID=BSGatlas-transcript-596;color=#B37924;Parent=BSGatlas-gene-643;comment="Based on: BSGatlas" basu168 BSGatlas gene 570371 571234 . - . ID=BSGatlas-gene-643;color=#3474B3;Name=ydeK;locus_tag=BSU_05230,BSU05230 basu168 BSGatlas CDS 570371 571234 . - 0 ID=BSGatlas-gene-643_transcribed;color=#3474B3;Name=ydeK;Parent=BSGatlas-transcript-596;comment="putative permease";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydeK";derives_from=BSGatlas-gene-643 basu168 BSGatlas UTR 571235 571323 . - . ID=BSGatlas-5'UTR-351;Parent=BSGatlas-transcript-596;comment="5'UTR" basu168 BSGatlas transcript 571313 572780 . + . ID=BSGatlas-transcript-597;color=#FF9900;Parent=BSGatlas-gene-644;comment="Based on: BSGatlas" basu168 BSGatlas UTR 571313 571388 . + . ID=BSGatlas-5'UTR-352;Parent=BSGatlas-transcript-597;comment="5'UTR" basu168 BSGatlas gene 571389 572780 . + . ID=BSGatlas-gene-644;color=#1E90FF;Name=ydeL;locus_tag=BSU_05240,BSU05240 basu168 BSGatlas CDS 571389 572780 . + 0 ID=BSGatlas-gene-644_transcribed;color=#1E90FF;Name=ydeL;Parent=BSGatlas-transcript-597;comment="putative PLP-dependent transcriptionalregulator";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0003824 catalytic activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0008483 transaminase activity,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0030170 pyridoxal phosphate binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydeL";derives_from=BSGatlas-gene-644 basu168 BSGatlas transcript 572940 573399 . + . ID=BSGatlas-transcript-598;color=#FF9900;Parent=BSGatlas-gene-645;comment="Based on: BSGatlas" basu168 BSGatlas UTR 572940 572973 . + . ID=BSGatlas-5'UTR-353;Parent=BSGatlas-transcript-598;comment="5'UTR" basu168 BSGatlas gene 572974 573399 . + . ID=BSGatlas-gene-645;color=#1E90FF;Name=ydeM;locus_tag=BSU_05250,BSU05250 basu168 BSGatlas CDS 572974 573399 . + 0 ID=BSGatlas-gene-645_transcribed;color=#1E90FF;Name=ydeM;Parent=BSGatlas-transcript-598;comment="putative dehydratase";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydeM";derives_from=BSGatlas-gene-645 basu168 BSGatlas transcript 573435 574469 . - . ID=BSGatlas-transcript-599;color=#B37924;Parent=BSGatlas-gene-647,BSGatlas-gene-646;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 573435 573451 . - . ID=BSGatlas-3'UTR-206;Parent=BSGatlas-transcript-599;comment="3'UTR" basu168 BSGatlas gene 573452 574024 . - . ID=BSGatlas-gene-646;color=#3474B3;Name=ydeN;locus_tag=BSU_05260,BSU05260 basu168 BSGatlas CDS 573452 574024 . - 0 ID=BSGatlas-gene-646_transcribed;color=#3474B3;Name=ydeN;Parent=BSGatlas-transcript-599;comment="putative alpha/beta hydrolase";ec="3.-.-.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydeN";derives_from=BSGatlas-gene-646 basu168 BSGatlas UTR 574025 574105 . - . ID=BSGatlas-internal_UTR-187;Parent=BSGatlas-transcript-599;comment="internal_UTR" basu168 BSGatlas gene 574106 574435 . - . ID=BSGatlas-gene-647;color=#3474B3;Name=ydzF;locus_tag=BSU_05270,BSU05270 basu168 BSGatlas CDS 574106 574435 . - 0 ID=BSGatlas-gene-647_transcribed;color=#3474B3;Name=ydzF;Parent=BSGatlas-transcript-599;comment="putative transcriptional regulator";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydzF";derives_from=BSGatlas-gene-647 basu168 BSGatlas UTR 574436 574469 . - . ID=BSGatlas-5'UTR-354;Parent=BSGatlas-transcript-599;comment="5'UTR" basu168 BSGatlas transcript 574656 575669 . + . ID=BSGatlas-transcript-601;color=#FF9900;Parent=BSGatlas-gene-648;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 574656 575562 . + . ID=BSGatlas-transcript-600;color=#FF9900;Parent=BSGatlas-gene-648;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 574656 574689 . + . ID=BSGatlas-5'UTR-355;Parent=BSGatlas-transcript-600,BSGatlas-transcript-601;comment="5'UTR" basu168 BSGatlas gene 574690 575562 . + . ID=BSGatlas-gene-648;color=#1E90FF;Name=ydeO;locus_tag=BSU_05280,BSU05280 basu168 BSGatlas CDS 574690 575562 . + 0 ID=BSGatlas-gene-648_transcribed;color=#1E90FF;Name=ydeO;Parent=BSGatlas-transcript-600,BSGatlas-transcript-601;comment="putative integral inner membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydeO";derives_from=BSGatlas-gene-648 basu168 BSGatlas UTR 575563 575669 . + . ID=BSGatlas-3'UTR-207;Parent=BSGatlas-transcript-601;comment="3'UTR" basu168 BSGatlas transcript 575712 576165 . - . ID=BSGatlas-transcript-602;color=#B37924;Parent=BSGatlas-gene-649;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 575712 576098 . - . ID=BSGatlas-gene-649;color=#3474B3;Name=ydeP;locus_tag=BSU_05290,BSU05290 basu168 BSGatlas CDS 575712 576098 . - 0 ID=BSGatlas-gene-649_transcribed;color=#3474B3;Name=ydeP;Parent=BSGatlas-transcript-602;comment="putative transcriptional regulator";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydeP";derives_from=BSGatlas-gene-649 basu168 BSGatlas UTR 576099 576165 . - . ID=BSGatlas-5'UTR-356;Parent=BSGatlas-transcript-602;comment="5'UTR" basu168 BSGatlas transcript 576175 576802 . + . ID=BSGatlas-transcript-603;color=#FF9900;Parent=BSGatlas-gene-650;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 576175 576208 . + . ID=BSGatlas-5'UTR-357;Parent=BSGatlas-transcript-603;comment="5'UTR" basu168 BSGatlas gene 576209 576802 . + . ID=BSGatlas-gene-650;color=#1E90FF;Name=ydeQ;locus_tag=BSU_05300,BSU05300 basu168 BSGatlas CDS 576209 576802 . + 0 ID=BSGatlas-gene-650_transcribed;color=#1E90FF;Name=ydeQ;Parent=BSGatlas-transcript-603;comment="putative NAD(P)H oxidoreductase involved inregulating potassium efflux";ec="1.6.99.-";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.4 Electron transport/ other/ based on similarity";synonyms="ydeQ";derives_from=BSGatlas-gene-650 basu168 BSGatlas gene 576946 578133 . - . ID=BSGatlas-gene-651;color=#3474B3;Name=ydeR;locus_tag=BSU_05310,BSU05310 basu168 BSGatlas transcript 576946 578133 . - . ID=BSGatlas-transcript-604;color=#B37924;Parent=BSGatlas-gene-651;comment="Based on: BsubCyc" basu168 BSGatlas CDS 576946 578133 . - 0 ID=BSGatlas-gene-651_transcribed;color=#3474B3;Name=ydeR;Parent=BSGatlas-transcript-604;comment="putative efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydeR";derives_from=BSGatlas-gene-651 basu168 BSGatlas transcript 578287 579232 . + . ID=BSGatlas-transcript-605;color=#FF9900;Parent=BSGatlas-gene-652,BSGatlas-gene-653;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 578287 578336 . + . ID=BSGatlas-5'UTR-358;Parent=BSGatlas-transcript-605;comment="5'UTR" basu168 BSGatlas gene 578337 578933 . + . ID=BSGatlas-gene-652;color=#1E90FF;Name=ydeS;locus_tag=BSU_05320,BSU05320 basu168 BSGatlas CDS 578337 578933 . + 0 ID=BSGatlas-gene-652_transcribed;color=#1E90FF;Name=ydeS;Parent=BSGatlas-transcript-605;comment="putative transcriptional regulator (TetR/AcrRfamily)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydeS";derives_from=BSGatlas-gene-652 basu168 BSGatlas UTR 578934 579046 . + . ID=BSGatlas-internal_UTR-188;Parent=BSGatlas-transcript-605;comment="internal_UTR" basu168 BSGatlas gene 579047 579232 . + . ID=BSGatlas-gene-653;color=#1E90FF;Name=ydzO;locus_tag=BSU_05329,BSU05329 basu168 BSGatlas CDS 579047 579232 . + 0 ID=BSGatlas-gene-653_transcribed;color=#1E90FF;Name=ydzO;Parent=BSGatlas-transcript-605;comment="hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzO";derives_from=BSGatlas-gene-653 basu168 BSGatlas transcript 579354 581454 . + . ID=BSGatlas-transcript-4931;color=#FF9900;Parent=BSGatlas-gene-654,BSGatlas-gene-655,BSGatlas-gene-656,BSGatlas-gene-657;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 579354 579540 . + . ID=BSGatlas-5'UTR-359;Parent=BSGatlas-transcript-4931;comment="5'UTR" basu168 BSGatlas gene 579541 579876 . + . ID=BSGatlas-gene-654;color=#1E90FF;Name=aseR;locus_tag=BSU_05330,BSU05330 basu168 BSGatlas CDS 579541 579876 . + 0 ID=BSGatlas-gene-654_transcribed;color=#1E90FF;Name=aseR;Parent=BSGatlas-transcript-4931;comment="transcriptional regulator (metals sensingArsR-SmtB repressors family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.11 Resistance against toxic metals";synonyms="aseR,ydeT";derives_from=BSGatlas-gene-654 basu168 BSGatlas gene 579889 581196 . + . ID=BSGatlas-gene-655;color=#1E90FF;Name=aseA;locus_tag=BSU_05340,BSU05340 basu168 BSGatlas CDS 579889 581196 . + 0 ID=BSGatlas-gene-655_transcribed;color=#1E90FF;Name=aseA;Parent=BSGatlas-transcript-4931;comment="arsenite/antimonite/H+ antiporter";go="GO:0005886 plasma membrane,GO:0015105 arsenite transmembrane transporter activity,GO:0015700 arsenite transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034220 ion transmembrane transport,GO:0046685 response to arsenic-containing substance";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.5 Metal ion transporter,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.11 Resistance against toxic metals";synonyms="aseA,ydfA";derives_from=BSGatlas-gene-655 basu168 BSGatlas UTR 581197 581227 . + . ID=BSGatlas-internal_UTR-189;Parent=BSGatlas-transcript-4931;comment="internal_UTR" basu168 BSGatlas gene 581228 581329 . + . ID=BSGatlas-gene-656;color=#1E90FF;Name=ydzS/1;locus_tag=BSU_05343 basu168 BSGatlas CDS 581228 581329 . + 0 ID=BSGatlas-gene-656_transcribed;color=#1E90FF;Name=ydzS/1;Parent=BSGatlas-transcript-4931;comment="conserved hypothetical protein; N-terminal partof ydzS";subtiwiki_category="SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzS/1";derives_from=BSGatlas-gene-656 basu168 BSGatlas gene 581341 581454 . + . ID=BSGatlas-gene-657;color=#1E90FF;Name=ydzS/2;locus_tag=BSU_05344 basu168 BSGatlas CDS 581341 581454 . + 0 ID=BSGatlas-gene-657_transcribed;color=#1E90FF;Name=ydzS/2;Parent=BSGatlas-transcript-4931;comment="conserved hypothetical protein; C-terminal partof ydzS";subtiwiki_category="SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzS/2";derives_from=BSGatlas-gene-657 basu168 BSGatlas transcript 581676 582511 . + . ID=BSGatlas-transcript-607;color=#FF9900;Parent=BSGatlas-gene-658;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 581676 581693 . + . ID=BSGatlas-5'UTR-360;Parent=BSGatlas-transcript-607;comment="5'UTR" basu168 BSGatlas gene 581694 582479 . + . ID=BSGatlas-gene-658;color=#1E90FF;Name=ydfB;locus_tag=BSU_05350,BSU05350 basu168 BSGatlas CDS 581694 582479 . + 0 ID=BSGatlas-gene-658_transcribed;color=#1E90FF;Name=ydfB;Parent=BSGatlas-transcript-607;comment="putative acetyltransferase";go="GO:0008080 N-acetyltransferase activity,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydfB";derives_from=BSGatlas-gene-658 basu168 BSGatlas UTR 582480 582511 . + . ID=BSGatlas-3'UTR-209;Parent=BSGatlas-transcript-607;comment="3'UTR" basu168 BSGatlas gene 582536 583456 . - . ID=BSGatlas-gene-659;color=#3474B3;Name=ydfC;locus_tag=BSU_05360,BSU05360 basu168 BSGatlas transcript 582536 583456 . - . ID=BSGatlas-transcript-608;color=#B37924;Parent=BSGatlas-gene-659;comment="Based on: BsubCyc" basu168 BSGatlas CDS 582536 583456 . - 0 ID=BSGatlas-gene-659_transcribed;color=#3474B3;Name=ydfC;Parent=BSGatlas-transcript-608;comment="putative aminoacid exporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydfC";derives_from=BSGatlas-gene-659 basu168 BSGatlas gene 583589 585037 . + . ID=BSGatlas-gene-660;color=#1E90FF;Name=ydfD;locus_tag=BSU_05370,BSU05370 basu168 BSGatlas transcript 583589 585037 . + . ID=BSGatlas-transcript-609;color=#FF9900;Parent=BSGatlas-gene-660;comment="Based on: BsubCyc" basu168 BSGatlas CDS 583589 585037 . + 0 ID=BSGatlas-gene-660_transcribed;color=#1E90FF;Name=ydfD;Parent=BSGatlas-transcript-609;comment="putative PLP-dependent transcriptionalregulator";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0003824 catalytic activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0008483 transaminase activity,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0030170 pyridoxal phosphate binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydfD";derives_from=BSGatlas-gene-660 basu168 BSGatlas transcript 585155 585821 . - . ID=BSGatlas-transcript-610;color=#B37924;Parent=BSGatlas-gene-661;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 585155 585778 . - . ID=BSGatlas-gene-661;color=#3474B3;Name=ydfE;locus_tag=BSU_05380,BSU05380 basu168 BSGatlas CDS 585155 585778 . - 0 ID=BSGatlas-gene-661_transcribed;color=#3474B3;Name=ydfE;Parent=BSGatlas-transcript-610;comment="putative flavoprotein";go="GO:0010181 FMN binding,GO:0016491 oxidoreductase activity,GO:0042602 riboflavin reductase (NADPH) activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydfE";derives_from=BSGatlas-gene-661 basu168 BSGatlas UTR 585779 585821 . - . ID=BSGatlas-5'UTR-361;Parent=BSGatlas-transcript-610;comment="5'UTR" basu168 BSGatlas transcript 585834 586603 . + . ID=BSGatlas-transcript-611;color=#FF9900;Parent=BSGatlas-gene-662;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 585834 585867 . + . ID=BSGatlas-5'UTR-362;Parent=BSGatlas-transcript-611;comment="5'UTR" basu168 BSGatlas gene 585868 586548 . + . ID=BSGatlas-gene-662;color=#1E90FF;Name=ydfF;locus_tag=BSU_05390,BSU05390 basu168 BSGatlas CDS 585868 586548 . + 0 ID=BSGatlas-gene-662_transcribed;color=#1E90FF;Name=ydfF;Parent=BSGatlas-transcript-611;comment="putative transcriptional regulator";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydfF";derives_from=BSGatlas-gene-662 basu168 BSGatlas UTR 586549 586603 . + . ID=BSGatlas-3'UTR-210;Parent=BSGatlas-transcript-611;comment="3'UTR" basu168 BSGatlas transcript 586611 587118 . - . ID=BSGatlas-transcript-612;color=#B37924;Parent=BSGatlas-gene-663;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 586611 586627 . - . ID=BSGatlas-3'UTR-211;Parent=BSGatlas-transcript-612;comment="3'UTR" basu168 BSGatlas gene 586628 587071 . - . ID=BSGatlas-gene-663;color=#3474B3;Name=ydfG;locus_tag=BSU_05400,BSU05400 basu168 BSGatlas CDS 586628 587071 . - 0 ID=BSGatlas-gene-663_transcribed;color=#3474B3;Name=ydfG;Parent=BSGatlas-transcript-612;comment="conserved hypothetical protein";go="GO:0051920 peroxiredoxin activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydfG";derives_from=BSGatlas-gene-663 basu168 BSGatlas UTR 587072 587118 . - . ID=BSGatlas-5'UTR-363;Parent=BSGatlas-transcript-612;comment="5'UTR" basu168 BSGatlas gene 587157 587336 . - . ID=BSGatlas-gene-664;color=#3474B3;Name=ydzP;locus_tag=BSU_05408,BSU05408 basu168 BSGatlas CDS 587157 587336 . - 0 ID=BSGatlas-gene-664_transcribed;color=#3474B3;Name=ydzP;comment="hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzP";derives_from=BSGatlas-gene-664 basu168 BSGatlas gene 587333 587476 . - . ID=BSGatlas-gene-665;color=#3474B3;Name=ydzQ;locus_tag=BSU_05409,BSU05409 basu168 BSGatlas CDS 587333 587476 . - 0 ID=BSGatlas-gene-665_transcribed;color=#3474B3;Name=ydzQ;comment="hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzQ";derives_from=BSGatlas-gene-665 basu168 BSGatlas transcript 587744 589661 . + . ID=BSGatlas-transcript-4932;color=#FF9900;Parent=BSGatlas-gene-666,BSGatlas-gene-667;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 587744 588967 . + . ID=BSGatlas-gene-666;color=#1E90FF;Name=ydfH;locus_tag=BSU_05410,BSU05410 basu168 BSGatlas CDS 587744 588967 . + 0 ID=BSGatlas-gene-666_transcribed;color=#1E90FF;Name=ydfH;Parent=BSGatlas-transcript-4932;comment="two-component sensor histidine kinase [YdfI]";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0004871 NA,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation,GO:0031975 envelope,GO:0046983 protein dimerization activity";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="ydfH";derives_from=BSGatlas-gene-666 basu168 BSGatlas gene 588960 589601 . + . ID=BSGatlas-gene-667;color=#1E90FF;Name=ydfI;locus_tag=BSU_05420,BSU05420 basu168 BSGatlas CDS 588960 589601 . + 0 ID=BSGatlas-gene-667_transcribed;color=#1E90FF;Name=ydfI;Parent=BSGatlas-transcript-4932;comment="two-component response regulator [YdfH]";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="ydfI";derives_from=BSGatlas-gene-667 basu168 BSGatlas UTR 589602 589661 . + . ID=BSGatlas-3'UTR-212;Parent=BSGatlas-transcript-4932;comment="3'UTR" basu168 BSGatlas transcript 589681 591936 . + . ID=BSGatlas-transcript-614;color=#FF9900;Parent=BSGatlas-gene-668;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 589681 589716 . + . ID=BSGatlas-5'UTR-365;Parent=BSGatlas-transcript-614;comment="5'UTR" basu168 BSGatlas transcript 589717 591936 . + . ID=BSGatlas-transcript-615;color=#FF9900;Parent=BSGatlas-gene-668;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 589717 591891 . + . ID=BSGatlas-gene-668;color=#1E90FF;Name=ydfJ;locus_tag=BSU_05430,BSU05430 basu168 BSGatlas CDS 589717 591891 . + 0 ID=BSGatlas-gene-668_transcribed;color=#1E90FF;Name=ydfJ;Parent=BSGatlas-transcript-614,BSGatlas-transcript-615;comment="putative proton metabolite efflux transporter";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydfJ";derives_from=BSGatlas-gene-668 basu168 BSGatlas UTR 591892 591936 . + . ID=BSGatlas-3'UTR-213;Parent=BSGatlas-transcript-614,BSGatlas-transcript-615;comment="3'UTR" basu168 BSGatlas transcript 592196 593301 . - . ID=BSGatlas-transcript-617;color=#B37924;Parent=BSGatlas-gene-669;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 592196 592302 . - . ID=BSGatlas-3'UTR-215;Parent=BSGatlas-transcript-617;comment="3'UTR" basu168 BSGatlas gene 592303 593205 . - . ID=BSGatlas-gene-669;color=#3474B3;Name=nap;locus_tag=BSU_05440,BSU05440 basu168 BSGatlas CDS 592303 593205 . - 0 ID=BSGatlas-gene-669_transcribed;color=#3474B3;Name=nap;Parent=BSGatlas-transcript-617;comment="carboxylesterase NP";ec="3.1.1.1,EC-3.1.1.1";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0052689 carboxylic ester hydrolase activity";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.1 Utilization of lipids,SW 2.4.1.4 Utilization of lipids/ other";synonyms="cesA,nap";derives_from=BSGatlas-gene-669 basu168 BSGatlas UTR 593206 593301 . - . ID=BSGatlas-5'UTR-366;Parent=BSGatlas-transcript-617;comment="5'UTR" basu168 BSGatlas transcript 593370 594123 . - . ID=BSGatlas-transcript-618;color=#B37924;Parent=BSGatlas-gene-670;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 593370 593406 . - . ID=BSGatlas-3'UTR-216;Parent=BSGatlas-transcript-618;comment="3'UTR" basu168 BSGatlas gene 593407 594096 . - . ID=BSGatlas-gene-670;color=#3474B3;Name=ydfK;locus_tag=BSU_05450,BSU05450 basu168 BSGatlas CDS 593407 594096 . - 0 ID=BSGatlas-gene-670_transcribed;color=#3474B3;Name=ydfK;Parent=BSGatlas-transcript-618;comment="putative integral inner membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydfK";derives_from=BSGatlas-gene-670 basu168 BSGatlas UTR 594097 594123 . - . ID=BSGatlas-5'UTR-367;Parent=BSGatlas-transcript-618;comment="5'UTR" basu168 BSGatlas transcript 594186 595040 . - . ID=BSGatlas-transcript-619;color=#B37924;Parent=BSGatlas-gene-671;comment="Based on: BSGatlas" basu168 BSGatlas gene 594186 594998 . - . ID=BSGatlas-gene-671;color=#3474B3;Name=ydfL;locus_tag=BSU_05460,BSU05460 basu168 BSGatlas CDS 594186 594998 . - 0 ID=BSGatlas-gene-671_transcribed;color=#3474B3;Name=ydfL;Parent=BSGatlas-transcript-619;comment="putative transcriptional regulator of effluxtransporter";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydfL";derives_from=BSGatlas-gene-671 basu168 BSGatlas UTR 594999 595040 . - . ID=BSGatlas-5'UTR-368;Parent=BSGatlas-transcript-619;comment="5'UTR" basu168 BSGatlas transcript 595109 596093 . - . ID=BSGatlas-transcript-620;color=#B37924;Parent=BSGatlas-gene-672;comment="Based on: BsubCyc" basu168 BSGatlas gene 595109 596002 . - . ID=BSGatlas-gene-672;color=#3474B3;Name=mneP;locus_tag=BSU_05470,BSU05470 basu168 BSGatlas CDS 595109 596002 . - 0 ID=BSGatlas-gene-672_transcribed;color=#3474B3;Name=mneP;Parent=BSGatlas-transcript-620;comment="primary Mn(II) efflux pump";go="GO:0005384 manganese ion transmembrane transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006812 cation transport,GO:0008324 cation transmembrane transporter activity,GO:0010042 response to manganese ion,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034220 ion transmembrane transport,GO:0071421 manganese ion transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.13 Metal ion exporters,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.2 Manganese,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="mneP,ydfM";derives_from=BSGatlas-gene-672 basu168 BSGatlas UTR 596003 596093 . - . ID=BSGatlas-5'UTR-369;Parent=BSGatlas-transcript-620;comment="5'UTR" basu168 BSGatlas transcript 596320 598588 . + . ID=BSGatlas-transcript-622;color=#FF9900;Parent=BSGatlas-gene-673,BSGatlas-gene-674,BSGatlas-gene-675;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 596320 598543 . + . ID=BSGatlas-transcript-621;color=#FF9900;Parent=BSGatlas-gene-673,BSGatlas-gene-674,BSGatlas-gene-675;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 596320 596477 . + . ID=BSGatlas-5'UTR-370;Parent=BSGatlas-transcript-621,BSGatlas-transcript-622;comment="5'UTR" basu168 BSGatlas gene 596478 597098 . + . ID=BSGatlas-gene-673;color=#1E90FF;Name=mhqN;locus_tag=BSU_05480,BSU05480 basu168 BSGatlas CDS 596478 597098 . + 0 ID=BSGatlas-gene-673_transcribed;color=#1E90FF;Name=mhqN;Parent=BSGatlas-transcript-621,BSGatlas-transcript-622;comment="putative oxidoreductase";ec="1.-.-.-";go="GO:0005737 cytoplasm,GO:0009636 response to toxic substance,GO:0016491 oxidoreductase activity,GO:0019439 aromatic compound catabolic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="mhqN,ydfN";derives_from=BSGatlas-gene-673 basu168 BSGatlas transcript 596833 598588 . + . ID=BSGatlas-transcript-625;color=#FF9900;Parent=BSGatlas-gene-674,BSGatlas-gene-675;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 596833 598543 . + . ID=BSGatlas-transcript-624;color=#FF9900;Parent=BSGatlas-gene-674,BSGatlas-gene-675;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 596833 598052 . + . ID=BSGatlas-transcript-623;color=#FF9900;Parent=BSGatlas-gene-674;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 596833 597113 . + . ID=BSGatlas-5'UTR-371;Parent=BSGatlas-transcript-623,BSGatlas-transcript-624,BSGatlas-transcript-625;comment="5'UTR" basu168 BSGatlas transcript 596860 598588 . + . ID=BSGatlas-transcript-628;color=#FF9900;Parent=BSGatlas-gene-674,BSGatlas-gene-675;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 596860 598543 . + . ID=BSGatlas-transcript-627;color=#FF9900;Parent=BSGatlas-gene-674,BSGatlas-gene-675;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 596860 598052 . + . ID=BSGatlas-transcript-626;color=#FF9900;Parent=BSGatlas-gene-674;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 596860 597113 . + . ID=BSGatlas-5'UTR-372;Parent=BSGatlas-transcript-626,BSGatlas-transcript-627,BSGatlas-transcript-628;comment="5'UTR" basu168 BSGatlas gene 597114 598052 . + . ID=BSGatlas-gene-674;color=#1E90FF;Name=mhqO;locus_tag=BSU_05490,BSU05490 basu168 BSGatlas CDS 597114 598052 . + 0 ID=BSGatlas-gene-674_transcribed;color=#1E90FF;Name=mhqO;Parent=BSGatlas-transcript-621,BSGatlas-transcript-622,BSGatlas-transcript-623,BSGatlas-transcript-624,BSGatlas-transcript-625,BSGatlas-transcript-626,BSGatlas-transcript-627,BSGatlas-transcript-628;comment="putative dioxygenase";ec="1.13.11.-";go="GO:0005737 cytoplasm,GO:0009636 response to toxic substance,GO:0016491 oxidoreductase activity,GO:0019439 aromatic compound catabolic process,GO:0046872 metal ion binding,GO:0051213 dioxygenase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="mhqO,ydfO";derives_from=BSGatlas-gene-674 basu168 BSGatlas UTR 598053 598153 . + . ID=BSGatlas-internal_UTR-190;Parent=BSGatlas-transcript-621,BSGatlas-transcript-622,BSGatlas-transcript-624,BSGatlas-transcript-625,BSGatlas-transcript-627,BSGatlas-transcript-628;comment="internal_UTR" basu168 BSGatlas transcript 598065 598588 . + . ID=BSGatlas-transcript-630;color=#FF9900;Parent=BSGatlas-gene-675;comment="Based on: BSGatlas" basu168 BSGatlas transcript 598065 598543 . + . ID=BSGatlas-transcript-629;color=#FF9900;Parent=BSGatlas-gene-675;comment="Based on: BSGatlas" basu168 BSGatlas UTR 598065 598153 . + . ID=BSGatlas-5'UTR-373;Parent=BSGatlas-transcript-629,BSGatlas-transcript-630;comment="5'UTR" basu168 BSGatlas gene 598154 598543 . + . ID=BSGatlas-gene-675;color=#1E90FF;Name=mhqP;locus_tag=BSU_05500,BSU05500 basu168 BSGatlas CDS 598154 598543 . + 0 ID=BSGatlas-gene-675_transcribed;color=#1E90FF;Name=mhqP;Parent=BSGatlas-transcript-621,BSGatlas-transcript-622,BSGatlas-transcript-624,BSGatlas-transcript-625,BSGatlas-transcript-627,BSGatlas-transcript-628,BSGatlas-transcript-629,BSGatlas-transcript-630;comment="putative membrane bound oxidoreductase";ec="1.-.-.-";go="GO:0005886 plasma membrane,GO:0009636 response to toxic substance,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016491 oxidoreductase activity,GO:0019439 aromatic compound catabolic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="mhqP,ydfP";derives_from=BSGatlas-gene-675 basu168 BSGatlas UTR 598544 598588 . + . ID=BSGatlas-3'UTR-217;Parent=BSGatlas-transcript-622,BSGatlas-transcript-625,BSGatlas-transcript-628,BSGatlas-transcript-630;comment="3'UTR" basu168 BSGatlas transcript 598659 599067 . + . ID=BSGatlas-transcript-631;color=#FF9900;Parent=BSGatlas-gene-676;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 598659 598728 . + . ID=BSGatlas-5'UTR-374;Parent=BSGatlas-transcript-631;comment="5'UTR" basu168 BSGatlas gene 598729 599067 . + . ID=BSGatlas-gene-676;color=#1E90FF;Name=ydfQ;locus_tag=BSU_05510,BSU05510 basu168 BSGatlas CDS 598729 599067 . + 0 ID=BSGatlas-gene-676_transcribed;color=#1E90FF;Name=ydfQ;Parent=BSGatlas-transcript-631;comment="putative thioredoxin or thiol-disulfideisomerase";go="GO:0045454 cell redox homeostasis";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.4 Electron transport/ other/ based on similarity";synonyms="ydfQ";derives_from=BSGatlas-gene-676 basu168 BSGatlas gene 599107 599343 . - . ID=BSGatlas-gene-677;color=#3474B3;Name=ydzH;locus_tag=BSU_05520,BSU05520 basu168 BSGatlas transcript 599107 599343 . - . ID=BSGatlas-transcript-633;color=#B37924;Parent=BSGatlas-gene-677;comment="Based on: SubtiWiki" basu168 BSGatlas CDS 599107 599343 . - 0 ID=BSGatlas-gene-677_transcribed;color=#3474B3;Name=ydzH;Parent=BSGatlas-transcript-633;comment="conserved hypothetical protein,sporulation-related";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling),SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzH";derives_from=BSGatlas-gene-677 basu168 BSGatlas transcript 599875 600143 . - . ID=BSGatlas-transcript-4933;color=#B37924;Parent=BSGatlas-gene-678;comment="Based on: SubtiWiki" basu168 BSGatlas gene 599875 600105 . - . ID=BSGatlas-gene-678;color=#3474B3;Name=ydzR;locus_tag=BSU_05529,BSU05529 basu168 BSGatlas CDS 599875 600105 . - 0 ID=BSGatlas-gene-678_transcribed;color=#3474B3;Name=ydzR;Parent=BSGatlas-transcript-4933;comment="conserved hypothetical protein,sporulation-related";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling),SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzR";derives_from=BSGatlas-gene-678 basu168 BSGatlas UTR 600106 600143 . - . ID=BSGatlas-5'UTR-376;Parent=BSGatlas-transcript-4933;comment="5'UTR" basu168 BSGatlas transcript 600187 600906 . - . ID=BSGatlas-transcript-636;color=#B37924;Parent=BSGatlas-gene-679;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 600187 600228 . - . ID=BSGatlas-3'UTR-220;Parent=BSGatlas-transcript-636;comment="3'UTR" basu168 BSGatlas gene 600229 600906 . - . ID=BSGatlas-gene-679;color=#3474B3;Name=ydfR;locus_tag=BSU_05530,BSU05530 basu168 BSGatlas CDS 600229 600906 . - 0 ID=BSGatlas-gene-679_transcribed;color=#3474B3;Name=ydfR;Parent=BSGatlas-transcript-636;comment="conserved membrane protein of unknown function";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydfR";derives_from=BSGatlas-gene-679 basu168 BSGatlas transcript 600956 602100 . + . ID=BSGatlas-transcript-637;color=#FF9900;Parent=BSGatlas-gene-680;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 600956 601018 . + . ID=BSGatlas-5'UTR-377;Parent=BSGatlas-transcript-637;comment="5'UTR" basu168 BSGatlas gene 601019 601726 . + . ID=BSGatlas-gene-680;color=#1E90FF;Name=ydfS;locus_tag=BSU_05540,BSU05540 basu168 BSGatlas CDS 601019 601726 . + 0 ID=BSGatlas-gene-680_transcribed;color=#1E90FF;Name=ydfS;Parent=BSGatlas-transcript-637;comment="conserved hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydfS";derives_from=BSGatlas-gene-680 basu168 BSGatlas UTR 601727 602100 . + . ID=BSGatlas-3'UTR-221;Parent=BSGatlas-transcript-637;comment="3'UTR" basu168 BSGatlas transcript 601741 602739 . - . ID=BSGatlas-transcript-638;color=#B37924;Parent=BSGatlas-gene-683,BSGatlas-gene-682,BSGatlas-gene-681;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 601741 602172 . - . ID=BSGatlas-gene-681;color=#3474B3;Name=cotP;locus_tag=BSU_05550,BSU05550 basu168 BSGatlas CDS 601741 602172 . - 0 ID=BSGatlas-gene-681_transcribed;color=#3474B3;Name=cotP;Parent=BSGatlas-transcript-638;comment="spore coat protein";go="GO:0030435 sporulation resulting in formation of a cellular spore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.5 Class V";synonyms="cotP,ydfT";derives_from=BSGatlas-gene-681 basu168 BSGatlas gene 602185 602427 . - . ID=BSGatlas-gene-682;color=#3474B3;Name=ydgA;locus_tag=BSU_05560,BSU05560 basu168 BSGatlas CDS 602185 602427 . - 0 ID=BSGatlas-gene-682_transcribed;color=#3474B3;Name=ydgA;Parent=BSGatlas-transcript-638;comment="conserved hypothetical protein; putativegermination protein";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="ydgA";derives_from=BSGatlas-gene-682 basu168 BSGatlas gene 602441 602713 . - . ID=BSGatlas-gene-683;color=#3474B3;Name=ydgB;locus_tag=BSU_05570,BSU05570 basu168 BSGatlas CDS 602441 602713 . - 0 ID=BSGatlas-gene-683_transcribed;color=#3474B3;Name=ydgB;Parent=BSGatlas-transcript-638;comment="conserved hypothetical protein; putativegermination protein";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.11 Efp-dependent proteins";synonyms="ydgB";derives_from=BSGatlas-gene-683 basu168 BSGatlas UTR 602714 602739 . - . ID=BSGatlas-5'UTR-378;Parent=BSGatlas-transcript-638;comment="5'UTR" basu168 BSGatlas transcript 602963 604576 . + . ID=BSGatlas-transcript-4934;color=#FF9900;Parent=BSGatlas-gene-684,BSGatlas-gene-685,BSGatlas-gene-686;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 602963 603011 . + . ID=BSGatlas-5'UTR-379;Parent=BSGatlas-transcript-4934;comment="5'UTR" basu168 BSGatlas gene 603012 603599 . + . ID=BSGatlas-gene-684;color=#1E90FF;Name=ydgC;locus_tag=BSU_05580,BSU05580 basu168 BSGatlas CDS 603012 603599 . + 0 ID=BSGatlas-gene-684_transcribed;color=#1E90FF;Name=ydgC;Parent=BSGatlas-transcript-4934;comment="putative transcriptional regulator";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydgC";derives_from=BSGatlas-gene-684 basu168 BSGatlas gene 603596 603940 . + . ID=BSGatlas-gene-685;color=#1E90FF;Name=ydgD;locus_tag=BSU_05590,BSU05590 basu168 BSGatlas CDS 603596 603940 . + 0 ID=BSGatlas-gene-685_transcribed;color=#1E90FF;Name=ydgD;Parent=BSGatlas-transcript-4934;comment="conserved hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydgD";derives_from=BSGatlas-gene-685 basu168 BSGatlas UTR 603941 604102 . + . ID=BSGatlas-internal_UTR-191;Parent=BSGatlas-transcript-4934;comment="internal_UTR" basu168 BSGatlas gene 604103 604576 . + . ID=BSGatlas-gene-686;color=#1E90FF;Name=ydgE;locus_tag=BSU_05600,BSU05600 basu168 BSGatlas CDS 604103 604576 . + 0 ID=BSGatlas-gene-686_transcribed;color=#1E90FF;Name=ydgE;Parent=BSGatlas-transcript-4934;comment="putative N-acetyltransferase";ec="2.3.1.-";go="GO:0008080 N-acetyltransferase activity,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.5 Protein acetylases/ deacetylases";synonyms="ydgE";derives_from=BSGatlas-gene-686 basu168 BSGatlas transcript 604697 606379 . - . ID=BSGatlas-transcript-641;color=#B37924;Parent=BSGatlas-gene-687;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 604697 604735 . - . ID=BSGatlas-3'UTR-224;Parent=BSGatlas-transcript-641;comment="3'UTR" basu168 BSGatlas gene 604736 606379 . - . ID=BSGatlas-gene-687;color=#3474B3;Name=vmlR;locus_tag=BSU_05610,BSU05610 basu168 BSGatlas CDS 604736 606379 . - 0 ID=BSGatlas-gene-687_transcribed;color=#3474B3;Name=vmlR;Parent=BSGatlas-transcript-641;comment="ATP-binding cassette efflux transporter";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0008152 metabolic process,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics";synonyms="expZ,vmlR";derives_from=BSGatlas-gene-687 basu168 BSGatlas gene 606406 606606 . - . ID=BSGatlas-gene-688;color=#24B324;Name=ncr1575;locus_tag=new_606414_606611_c basu168 BSGatlas transcript 606406 606606 . - . ID=BSGatlas-transcript-642;color=#B37924;Parent=BSGatlas-gene-688;comment="Based on: BSGatlas" basu168 BSGatlas sRNA 606406 606606 . - . ID=BSGatlas-gene-688_transcribed;color=#24B324;Name=ncr1575;Parent=BSGatlas-transcript-642;synonyms="S198";derives_from=BSGatlas-gene-688 basu168 BSGatlas transcript 606676 608140 . - . ID=BSGatlas-transcript-643;color=#B37924;Parent=BSGatlas-gene-689;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 606676 606698 . - . ID=BSGatlas-3'UTR-225;Parent=BSGatlas-transcript-643;comment="3'UTR" basu168 BSGatlas gene 606699 608075 . - . ID=BSGatlas-gene-689;color=#3474B3;Name=ydgF;locus_tag=BSU_05620,BSU05620 basu168 BSGatlas CDS 606699 608075 . - 0 ID=BSGatlas-gene-689_transcribed;color=#3474B3;Name=ydgF;Parent=BSGatlas-transcript-643;comment="putative amino acid permease";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0015171 amino acid transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydgF";derives_from=BSGatlas-gene-689 basu168 BSGatlas UTR 608076 608140 . - . ID=BSGatlas-5'UTR-380;Parent=BSGatlas-transcript-643;comment="5'UTR" basu168 BSGatlas transcript 608219 608809 . - . ID=BSGatlas-transcript-644;color=#B37924;Parent=BSGatlas-gene-690;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 608219 608245 . - . ID=BSGatlas-3'UTR-226;Parent=BSGatlas-transcript-644;comment="3'UTR" basu168 BSGatlas gene 608246 608764 . - . ID=BSGatlas-gene-690;color=#3474B3;Name=bstG;locus_tag=BSU_05630,BSU05630 basu168 BSGatlas CDS 608246 608764 . - 0 ID=BSGatlas-gene-690_transcribed;color=#3474B3;Name=bstG;Parent=BSGatlas-transcript-644;comment="nuclease inhibitor";go="GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins";synonyms="bstG,dinB";derives_from=BSGatlas-gene-690 basu168 BSGatlas UTR 608765 608809 . - . ID=BSGatlas-5'UTR-381;Parent=BSGatlas-transcript-644;comment="5'UTR" basu168 BSGatlas transcript 608886 612188 . + . ID=BSGatlas-transcript-646;color=#FF9900;Parent=BSGatlas-gene-691,BSGatlas-gene-692;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 608886 612091 . + . ID=BSGatlas-transcript-645;color=#FF9900;Parent=BSGatlas-gene-691,BSGatlas-gene-692;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 608886 608932 . + . ID=BSGatlas-5'UTR-382;Parent=BSGatlas-transcript-645,BSGatlas-transcript-646;comment="5'UTR" basu168 BSGatlas gene 608933 609391 . + . ID=BSGatlas-gene-691;color=#1E90FF;Name=ydgG;locus_tag=BSU_05640,BSU05640 basu168 BSGatlas CDS 608933 609391 . + 0 ID=BSGatlas-gene-691_transcribed;color=#1E90FF;Name=ydgG;Parent=BSGatlas-transcript-645,BSGatlas-transcript-646;comment="putative transcriptional regulator (MarRfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydgG";derives_from=BSGatlas-gene-691 basu168 BSGatlas gene 609388 612045 . + . ID=BSGatlas-gene-692;color=#1E90FF;Name=ydgH;locus_tag=BSU_05650,BSU05650 basu168 BSGatlas CDS 609388 612045 . + 0 ID=BSGatlas-gene-692_transcribed;color=#1E90FF;Name=ydgH;Parent=BSGatlas-transcript-645,BSGatlas-transcript-646;comment="putative membrane component";go="GO:0005515 protein binding,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydgH";derives_from=BSGatlas-gene-692 basu168 BSGatlas UTR 612046 612188 . + . ID=BSGatlas-3'UTR-228;Parent=BSGatlas-transcript-646;comment="3'UTR" basu168 BSGatlas UTR 612046 612091 . + . ID=BSGatlas-3'UTR-227;Parent=BSGatlas-transcript-645;comment="3'UTR" basu168 BSGatlas transcript 612173 613330 . - . ID=BSGatlas-transcript-647;color=#B37924;Parent=BSGatlas-gene-694,BSGatlas-gene-693;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 612173 612190 . - . ID=BSGatlas-3'UTR-229;Parent=BSGatlas-transcript-647;comment="3'UTR" basu168 BSGatlas gene 612191 612820 . - . ID=BSGatlas-gene-693;color=#3474B3;Name=ydgI;locus_tag=BSU_05660,BSU05660 basu168 BSGatlas CDS 612191 612820 . - 0 ID=BSGatlas-gene-693_transcribed;color=#3474B3;Name=ydgI;Parent=BSGatlas-transcript-647;comment="nitroreductase of unidentified specificity(reduces 5-(aziridin-1-yl)-2,4-dinitrobenzamide prodrug)";ec="1.-.-.-";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydgI";derives_from=BSGatlas-gene-693 basu168 BSGatlas gene 612836 613330 . - . ID=BSGatlas-gene-694;color=#3474B3;Name=ydgJ;locus_tag=BSU_05670,BSU05670 basu168 BSGatlas CDS 612836 613330 . - 0 ID=BSGatlas-gene-694_transcribed;color=#3474B3;Name=ydgJ;Parent=BSGatlas-transcript-647;comment="putative transcriptional regulator (MarRfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydgJ";derives_from=BSGatlas-gene-694 basu168 BSGatlas transcript 613552 614849 . + . ID=BSGatlas-transcript-648;color=#FF9900;Parent=BSGatlas-gene-695;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 613552 613640 . + . ID=BSGatlas-5'UTR-383;Parent=BSGatlas-transcript-648;comment="5'UTR" basu168 BSGatlas gene 613641 614849 . + . ID=BSGatlas-gene-695;color=#1E90FF;Name=ydgK;locus_tag=BSU_05680,BSU05680 basu168 BSGatlas CDS 613641 614849 . + 0 ID=BSGatlas-gene-695_transcribed;color=#1E90FF;Name=ydgK;Parent=BSGatlas-transcript-648;comment="putative efflux transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydgK";derives_from=BSGatlas-gene-695 basu168 BSGatlas transcript 614885 615761 . - . ID=BSGatlas-transcript-649;color=#B37924;Parent=BSGatlas-gene-696;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 614885 615622 . - . ID=BSGatlas-gene-696;color=#3474B3;Name=ydhB;locus_tag=BSU_05690,BSU05690 basu168 BSGatlas CDS 614885 615622 . - 0 ID=BSGatlas-gene-696_transcribed;color=#3474B3;Name=ydhB;Parent=BSGatlas-transcript-649;comment="putative integral inner membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="ydhB";derives_from=BSGatlas-gene-696 basu168 BSGatlas UTR 615623 615761 . - . ID=BSGatlas-5'UTR-384;Parent=BSGatlas-transcript-649;comment="5'UTR" basu168 BSGatlas transcript 615818 616545 . + . ID=BSGatlas-transcript-650;color=#FF9900;Parent=BSGatlas-gene-697;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 615818 615870 . + . ID=BSGatlas-5'UTR-385;Parent=BSGatlas-transcript-650;comment="5'UTR" basu168 BSGatlas gene 615871 616545 . + . ID=BSGatlas-gene-697;color=#1E90FF;Name=ydhC;locus_tag=BSU_05700,BSU05700 basu168 BSGatlas CDS 615871 616545 . + 0 ID=BSGatlas-gene-697_transcribed;color=#1E90FF;Name=ydhC;Parent=BSGatlas-transcript-650;comment="putative transcriptional regulator (GntRfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="ydhC";derives_from=BSGatlas-gene-697 basu168 BSGatlas transcript 616631 617934 . + . ID=BSGatlas-transcript-651;color=#FF9900;Parent=BSGatlas-gene-698;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 616631 616671 . + . ID=BSGatlas-5'UTR-386;Parent=BSGatlas-transcript-651;comment="5'UTR" basu168 BSGatlas gene 616672 617934 . + . ID=BSGatlas-gene-698;color=#1E90FF;Name=ydhD;locus_tag=BSU_05710,BSU05710 basu168 BSGatlas CDS 616672 617934 . + 0 ID=BSGatlas-gene-698_transcribed;color=#1E90FF;Name=ydhD;Parent=BSGatlas-transcript-651;comment="spore cortex lytic enzyme";go="GO:0000272 polysaccharide catabolic process,GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0004568 chitinase activity,GO:0005975 carbohydrate metabolic process,GO:0006032 chitin catabolic process,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0016998 cell wall macromolecule catabolic process,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0031160 spore wall";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.6 Cell wall/ other/ based on similarity,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.8 Not yet assigned";synonyms="ydhD";derives_from=BSGatlas-gene-698 basu168 BSGatlas transcript 618045 619316 . + . ID=BSGatlas-transcript-652;color=#FF9900;Parent=BSGatlas-gene-699;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 618045 618094 . + . ID=BSGatlas-5'UTR-387;Parent=BSGatlas-transcript-652;comment="5'UTR" basu168 BSGatlas gene 618095 619282 . + . ID=BSGatlas-gene-699;color=#1E90FF;Name=ydhE;locus_tag=BSU_05720,BSU05720 basu168 BSGatlas CDS 618095 619282 . + 0 ID=BSGatlas-gene-699_transcribed;color=#1E90FF;Name=ydhE;Parent=BSGatlas-transcript-652;comment="putative glycosyltransferase";go="GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016757 transferase activity, transferring glycosyl groups,GO:0016758 transferase activity, transferring hexosyl groups,GO:0016999 antibiotic metabolic process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity";synonyms="ydhE";derives_from=BSGatlas-gene-699 basu168 BSGatlas transcript 619274 621604 . - . ID=BSGatlas-transcript-654;color=#B37924;Parent=BSGatlas-gene-701,BSGatlas-gene-700;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 619274 621522 . - . ID=BSGatlas-transcript-653;color=#B37924;Parent=BSGatlas-gene-701,BSGatlas-gene-700;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 619274 619320 . - . ID=BSGatlas-3'UTR-230;Parent=BSGatlas-transcript-653,BSGatlas-transcript-654;comment="3'UTR" basu168 BSGatlas UTR 619283 619316 . + . ID=BSGatlas-3'UTR-231;Parent=BSGatlas-transcript-652;comment="3'UTR" basu168 BSGatlas transcript 619321 621604 . - . ID=BSGatlas-transcript-656;color=#B37924;Parent=BSGatlas-gene-701,BSGatlas-gene-700;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 619321 621522 . - . ID=BSGatlas-transcript-655;color=#B37924;Parent=BSGatlas-gene-701,BSGatlas-gene-700;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 619321 620031 . - . ID=BSGatlas-gene-700;color=#3474B3;Name=ydhF;locus_tag=BSU_05730,BSU05730 basu168 BSGatlas CDS 619321 620031 . - 0 ID=BSGatlas-gene-700_transcribed;color=#3474B3;Name=ydhF;Parent=BSGatlas-transcript-653,BSGatlas-transcript-654,BSGatlas-transcript-655,BSGatlas-transcript-656;comment="putative phosphate-starvation lipoprotein";go="GO:0005615 extracellular space";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="ydhF";derives_from=BSGatlas-gene-700 basu168 BSGatlas UTR 620032 620096 . - . ID=BSGatlas-internal_UTR-192;Parent=BSGatlas-transcript-653,BSGatlas-transcript-654,BSGatlas-transcript-655,BSGatlas-transcript-656;comment="internal_UTR" basu168 BSGatlas gene 620097 621485 . - . ID=BSGatlas-gene-701;color=#3474B3;Name=phoB;locus_tag=BSU_05740,BSU05740 basu168 BSGatlas CDS 620097 621485 . - 0 ID=BSGatlas-gene-701_transcribed;color=#3474B3;Name=phoB;Parent=BSGatlas-transcript-653,BSGatlas-transcript-654,BSGatlas-transcript-655,BSGatlas-transcript-656;comment="alkaline phosphatase III (promiscuous,heptaprenylglyceryl phosphate is a substrate)";ec="3.1.3.1,EC-3.1.3.1";go="GO:0003824 catalytic activity,GO:0004035 alkaline phosphatase activity,GO:0008152 metabolic process,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity,GO:0016791 phosphatase activity,GO:0046872 metal ion binding";kegg_pathways="Folate biosynthesis (ko00790),Metabolic pathways (ko01100),Thiamine metabolism (ko00730),Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.3 Phosphate metabolism,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="phoAIII,phoB";derives_from=BSGatlas-gene-701 basu168 BSGatlas UTR 621486 621604 . - . ID=BSGatlas-5'UTR-389;Parent=BSGatlas-transcript-654,BSGatlas-transcript-656;comment="5'UTR" basu168 BSGatlas UTR 621486 621522 . - . ID=BSGatlas-5'UTR-388;Parent=BSGatlas-transcript-653,BSGatlas-transcript-655;comment="5'UTR" basu168 BSGatlas transcript 621713 622218 . + . ID=BSGatlas-transcript-657;color=#FF9900;Parent=BSGatlas-gene-702;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 621713 621846 . + . ID=BSGatlas-5'UTR-390;Parent=BSGatlas-transcript-657;comment="5'UTR" basu168 BSGatlas gene 621847 622218 . + . ID=BSGatlas-gene-702;color=#1E90FF;Name=fra;locus_tag=BSU_05750,BSU05750 basu168 BSGatlas CDS 621847 622218 . + 0 ID=BSGatlas-gene-702_transcribed;color=#1E90FF;Name=fra;Parent=BSGatlas-transcript-657;comment="frataxin; iron/sulfur chaperone";go="GO:0008198 ferrous iron binding,GO:0018283 iron incorporation into metallo-sulfur cluster";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.3 Biosynthesis of iron-sulfur clusters";synonyms="fra,ydhG";derives_from=BSGatlas-gene-702 basu168 BSGatlas transcript 622270 623329 . - . ID=BSGatlas-transcript-658;color=#B37924;Parent=BSGatlas-gene-704,BSGatlas-gene-703;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 622270 622292 . - . ID=BSGatlas-3'UTR-232;Parent=BSGatlas-transcript-658;comment="3'UTR" basu168 BSGatlas gene 622293 622790 . - . ID=BSGatlas-gene-703;color=#3474B3;Name=ydhH;locus_tag=BSU_05760,BSU05760 basu168 BSGatlas CDS 622293 622790 . - 0 ID=BSGatlas-gene-703_transcribed;color=#3474B3;Name=ydhH;Parent=BSGatlas-transcript-658;comment="conserved hypothetical protein";go="GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydhH";derives_from=BSGatlas-gene-703 basu168 BSGatlas UTR 622791 622807 . - . ID=BSGatlas-internal_UTR-193;Parent=BSGatlas-transcript-658;comment="internal_UTR" basu168 BSGatlas gene 622808 623290 . - . ID=BSGatlas-gene-704;color=#3474B3;Name=ydhI;locus_tag=BSU_05770,BSU05770 basu168 BSGatlas CDS 622808 623290 . - 0 ID=BSGatlas-gene-704_transcribed;color=#3474B3;Name=ydhI;Parent=BSGatlas-transcript-658;comment="putative acetyltransferase";go="GO:0008080 N-acetyltransferase activity,GO:0008152 metabolic process";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydhI";derives_from=BSGatlas-gene-704 basu168 BSGatlas transcript 622988 624350 . + . ID=BSGatlas-transcript-659;color=#FF9900;Parent=BSGatlas-gene-705;comment="Based on: BSGatlas" basu168 BSGatlas UTR 622988 623372 . + . ID=BSGatlas-5'UTR-391;Parent=BSGatlas-transcript-659;comment="5'UTR" basu168 BSGatlas UTR 623291 623329 . - . ID=BSGatlas-5'UTR-392;Parent=BSGatlas-transcript-658;comment="5'UTR" basu168 BSGatlas gene 623373 624350 . + . ID=BSGatlas-gene-705;color=#1E90FF;Name=ydhJ;locus_tag=BSU_05780,BSU05780 basu168 BSGatlas CDS 623373 624350 . + 0 ID=BSGatlas-gene-705_transcribed;color=#1E90FF;Name=ydhJ;Parent=BSGatlas-transcript-659;comment="putative metal-dependent phosphohydrolase";go="GO:0003824 catalytic activity,GO:0008081 phosphoric diester hydrolase activity,GO:0008152 metabolic process,GO:0046872 metal ion binding";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydhJ";derives_from=BSGatlas-gene-705 basu168 BSGatlas transcript 624406 625151 . + . ID=BSGatlas-transcript-660;color=#FF9900;Parent=BSGatlas-gene-706;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 624406 624491 . + . ID=BSGatlas-5'UTR-393;Parent=BSGatlas-transcript-660;comment="5'UTR" basu168 BSGatlas transcript 624462 625151 . + . ID=BSGatlas-transcript-661;color=#FF9900;Parent=BSGatlas-gene-706;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 624462 624491 . + . ID=BSGatlas-5'UTR-394;Parent=BSGatlas-transcript-661;comment="5'UTR" basu168 BSGatlas gene 624492 625109 . + . ID=BSGatlas-gene-706;color=#1E90FF;Name=ydhK;locus_tag=BSU_05790,BSU05790 basu168 BSGatlas CDS 624492 625109 . + 0 ID=BSGatlas-gene-706_transcribed;color=#1E90FF;Name=ydhK;Parent=BSGatlas-transcript-660,BSGatlas-transcript-661;comment="hypothetical protein";go="GO:0000303 response to superoxide";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="ydhK";derives_from=BSGatlas-gene-706 basu168 BSGatlas UTR 625110 625151 . + . ID=BSGatlas-3'UTR-233;Parent=BSGatlas-transcript-660,BSGatlas-transcript-661;comment="3'UTR" basu168 BSGatlas transcript 625125 626470 . - . ID=BSGatlas-transcript-662;color=#B37924;Parent=BSGatlas-gene-707;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 625125 626291 . - . ID=BSGatlas-gene-707;color=#3474B3;Name=pbuE;locus_tag=BSU_05800,BSU05800 basu168 BSGatlas CDS 625125 626291 . - 0 ID=BSGatlas-gene-707_transcribed;color=#3474B3;Name=pbuE;Parent=BSGatlas-transcript-662;comment="hypoxanthine efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006863 purine nucleobase transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.6 Nucleotide/ nucleoside transporter,SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.4 Nucleotide metabolism/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="pbuE,ydhL";derives_from=BSGatlas-gene-707 basu168 BSGatlas UTR 626292 626470 . - . ID=BSGatlas-5'UTR-395;Parent=BSGatlas-transcript-662;comment="5'UTR" basu168 BSGatlas transcript 626329 626446 . - . ID=BSGatlas-transcript-663;color=#B37924;Parent=BSGatlas-gene-708;comment="Based on: BSGatlas" basu168 BSGatlas UTR 626329 626345 . - . ID=BSGatlas-3'UTR-234;Parent=BSGatlas-transcript-663;comment="3'UTR" basu168 BSGatlas gene 626346 626446 . - . ID=BSGatlas-gene-708;color=#6B6B6B;Name=Purine_aswA;locus_tag=BSU_misc_RNA_8 basu168 BSGatlas riboswitch 626346 626446 . - . ID=BSGatlas-gene-708_transcribed;color=#6B6B6B;Name=Purine_aswA;Parent=BSGatlas-transcript-663;comment="adenine riboswitch";synonyms="BSU_misc_RNA_8";derives_from=BSGatlas-gene-708 basu168 BSGatlas transcript 626591 633878 . + . ID=BSGatlas-transcript-664;color=#FF9900;Parent=BSGatlas-gene-709,BSGatlas-gene-710,BSGatlas-gene-711,BSGatlas-gene-712,BSGatlas-gene-713,BSGatlas-gene-714,BSGatlas-gene-715,BSGatlas-gene-716;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 626591 626621 . + . ID=BSGatlas-5'UTR-396;Parent=BSGatlas-transcript-664;comment="5'UTR" basu168 BSGatlas gene 626622 626933 . + . ID=BSGatlas-gene-709;color=#1E90FF;Name=gmuB;locus_tag=BSU_05810,BSU05810 basu168 BSGatlas CDS 626622 626933 . + 0 ID=BSGatlas-gene-709_transcribed;color=#1E90FF;Name=gmuB;Parent=BSGatlas-transcript-664;comment="oligo-alpha-mannoside phosphotransferase systemenzyme IIB";go="GO:0005737 cytoplasm,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015774 polysaccharide transport,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport";kegg_pathways="Phosphotransferase system (PTS) (ko02060),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue";synonyms="gmuB,ydhM";derives_from=BSGatlas-gene-709 basu168 BSGatlas gene 626933 627265 . + . ID=BSGatlas-gene-710;color=#1E90FF;Name=gmuA;locus_tag=BSU_05820,BSU05820 basu168 BSGatlas CDS 626933 627265 . + 0 ID=BSGatlas-gene-710_transcribed;color=#1E90FF;Name=gmuA;Parent=BSGatlas-transcript-664;comment="oligo-alpha-mannoside phosphotransferase systemenzyme IIA";go="GO:0005351 carbohydrate:proton symporter activity,GO:0005737 cytoplasm,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015774 polysaccharide transport,GO:0015992 NA,GO:0016020 membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport";kegg_pathways="Phosphotransferase system (PTS) (ko02060),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="gmuA,ydhN";derives_from=BSGatlas-gene-710 basu168 BSGatlas UTR 627266 627283 . + . ID=BSGatlas-internal_UTR-194;Parent=BSGatlas-transcript-664;comment="internal_UTR" basu168 BSGatlas gene 627284 628612 . + . ID=BSGatlas-gene-711;color=#1E90FF;Name=gmuC;locus_tag=BSU_05830,BSU05830 basu168 BSGatlas transcript 627284 628612 . + . ID=BSGatlas-transcript-665;color=#FF9900;Parent=BSGatlas-gene-711;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas CDS 627284 628612 . + 0 ID=BSGatlas-gene-711_transcribed;color=#1E90FF;Name=gmuC;Parent=BSGatlas-transcript-664,BSGatlas-transcript-665;comment="oligo-alpha-mannoside phosphotransferase systemenzyme IIC";go="GO:0005351 carbohydrate:proton symporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008152 metabolic process,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015774 polysaccharide transport,GO:0015992 NA,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport";kegg_pathways="Phosphotransferase system (PTS) (ko02060),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan,SW 6 Groups of genes,SW 6.11 Efp-dependent proteins";synonyms="gmuC,ydhO";derives_from=BSGatlas-gene-711 basu168 BSGatlas UTR 628613 628629 . + . ID=BSGatlas-internal_UTR-195;Parent=BSGatlas-transcript-664;comment="internal_UTR" basu168 BSGatlas gene 628630 630027 . + . ID=BSGatlas-gene-712;color=#1E90FF;Name=gmuD;locus_tag=BSU_05840,BSU05840 basu168 BSGatlas CDS 628630 630027 . + 0 ID=BSGatlas-gene-712_transcribed;color=#1E90FF;Name=gmuD;Parent=BSGatlas-transcript-664;comment="mannoside-phospho-beta-d-glucosidase";ec="3.2.1.86,EC-3.2.1.21";go="GO:0000272 polysaccharide catabolic process,GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0005975 carbohydrate metabolic process,GO:0008152 metabolic process,GO:0008706 6-phospho-beta-glucosidase activity,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds";kegg_pathways="Glycolysis / Gluconeogenesis (ko00010),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan";synonyms="gmuD,ydhP";derives_from=BSGatlas-gene-712 basu168 BSGatlas UTR 630028 630169 . + . ID=BSGatlas-internal_UTR-196;Parent=BSGatlas-transcript-664;comment="internal_UTR" basu168 BSGatlas transcript 630116 633878 . + . ID=BSGatlas-transcript-666;color=#FF9900;Parent=BSGatlas-gene-713,BSGatlas-gene-714,BSGatlas-gene-715,BSGatlas-gene-716;comment="Based on: BSGatlas" basu168 BSGatlas UTR 630116 630169 . + . ID=BSGatlas-5'UTR-397;Parent=BSGatlas-transcript-666;comment="5'UTR" basu168 BSGatlas gene 630170 630883 . + . ID=BSGatlas-gene-713;color=#1E90FF;Name=gmuR;locus_tag=BSU_05850,BSU05850 basu168 BSGatlas CDS 630170 630883 . + 0 ID=BSGatlas-gene-713_transcribed;color=#1E90FF;Name=gmuR;Parent=BSGatlas-transcript-664,BSGatlas-transcript-666;comment="transcriptional regulator (GntR family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="gmuR,ydhQ";derives_from=BSGatlas-gene-713 basu168 BSGatlas UTR 630884 630911 . + . ID=BSGatlas-internal_UTR-197;Parent=BSGatlas-transcript-664,BSGatlas-transcript-666;comment="internal_UTR" basu168 BSGatlas gene 630912 631811 . + . ID=BSGatlas-gene-714;color=#1E90FF;Name=gmuE;locus_tag=BSU_05860,BSU05860 basu168 BSGatlas CDS 630912 631811 . + 0 ID=BSGatlas-gene-714_transcribed;color=#1E90FF;Name=gmuE;Parent=BSGatlas-transcript-664,BSGatlas-transcript-666;comment="ROK fructokinase; glucomannan utilizationprotein E";ec="2.7.1.4";go="GO:0000166 nucleotide binding,GO:0000272 polysaccharide catabolic process,GO:0005524 ATP binding,GO:0005975 carbohydrate metabolic process,GO:0008270 zinc ion binding,GO:0008865 fructokinase activity,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0046835 carbohydrate phosphorylation,GO:0046872 metal ion binding";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Biosynthesis of secondary metabolites (ko01110),Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan";synonyms="gmuE,ydhR";derives_from=BSGatlas-gene-714 basu168 BSGatlas gene 631808 632755 . + . ID=BSGatlas-gene-715;color=#1E90FF;Name=gmuF;locus_tag=BSU_05870,BSU05870 basu168 BSGatlas CDS 631808 632755 . + 0 ID=BSGatlas-gene-715_transcribed;color=#1E90FF;Name=gmuF;Parent=BSGatlas-transcript-664,BSGatlas-transcript-666;comment="phosphohexomutase; cupin family";ec="5.3.1.8";go="GO:0004476 mannose-6-phosphate isomerase activity,GO:0005975 carbohydrate metabolic process,GO:0008270 zinc ion binding,GO:0016853 isomerase activity,GO:0046872 metal ion binding";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Biosynthesis of secondary metabolites (ko01110),Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100),O-Antigen nucleotide sugar biosynthesis (ko00541)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan";synonyms="gmuF,ydhS";derives_from=BSGatlas-gene-715 basu168 BSGatlas UTR 632756 632773 . + . ID=BSGatlas-internal_UTR-198;Parent=BSGatlas-transcript-664,BSGatlas-transcript-666;comment="internal_UTR" basu168 BSGatlas gene 632774 633862 . + . ID=BSGatlas-gene-716;color=#1E90FF;Name=gmuG;locus_tag=BSU_05880,BSU05880 basu168 BSGatlas CDS 632774 633862 . + 0 ID=BSGatlas-gene-716_transcribed;color=#1E90FF;Name=gmuG;Parent=BSGatlas-transcript-664,BSGatlas-transcript-666;comment="exported mannan endo-1,4-beta-mannosidase";ec="3.2.1.78,EC-3.2.1.78";go="GO:0000272 polysaccharide catabolic process,GO:0005576 extracellular region,GO:0005975 carbohydrate metabolic process,GO:0006080 substituted mannan metabolic process,GO:0008152 metabolic process,GO:0008810 cellulase activity,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0016985 mannan endo-1,4-beta-mannosidase activity";kegg_pathways="Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100),Quorum sensing (ko02024)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.25 Utilization of glucomannan,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="gmuG,ydhT";derives_from=BSGatlas-gene-716 basu168 BSGatlas UTR 633863 633878 . + . ID=BSGatlas-3'UTR-235;Parent=BSGatlas-transcript-664,BSGatlas-transcript-666;comment="3'UTR" basu168 BSGatlas transcript 633871 634817 . - . ID=BSGatlas-transcript-668;color=#B37924;Parent=BSGatlas-gene-718,BSGatlas-gene-717;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 633871 634651 . - . ID=BSGatlas-transcript-667;color=#B37924;Parent=BSGatlas-gene-717;comment="Based on: DBTBS" basu168 BSGatlas UTR 633871 633922 . - . ID=BSGatlas-3'UTR-236;Parent=BSGatlas-transcript-667,BSGatlas-transcript-668;comment="3'UTR" basu168 BSGatlas transcript 633923 634817 . - . ID=BSGatlas-transcript-670;color=#B37924;Parent=BSGatlas-gene-718,BSGatlas-gene-717;comment="Based on: SubtiWiki" basu168 BSGatlas gene 633923 634651 . - . ID=BSGatlas-gene-717;color=#3474B3;Name=ydhU/1;locus_tag=BSU_05890 basu168 BSGatlas transcript 633923 634651 . - . ID=BSGatlas-transcript-669;color=#B37924;Parent=BSGatlas-gene-717;comment="Based on: DBTBS" basu168 BSGatlas CDS 633923 634651 . - 0 ID=BSGatlas-gene-717_transcribed;color=#3474B3;Name=ydhU/1;Parent=BSGatlas-transcript-667,BSGatlas-transcript-668,BSGatlas-transcript-669,BSGatlas-transcript-670;comment="Mn catalase fragment; C-terminal part of YhdU";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.9 Resistance against oxidative and electrophile stress/ based on similarity,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydhU,ydhU/1";derives_from=BSGatlas-gene-717 basu168 BSGatlas transcript 634651 634817 . - . ID=BSGatlas-transcript-671;color=#B37924;Parent=BSGatlas-gene-718;comment="Based on: SubtiWiki" basu168 BSGatlas gene 634651 634776 . - . ID=BSGatlas-gene-718;color=#3474B3;Name=ydhU/2;locus_tag=BSU_05899 basu168 BSGatlas CDS 634651 634776 . - 0 ID=BSGatlas-gene-718_transcribed;color=#3474B3;Name=ydhU/2;Parent=BSGatlas-transcript-668,BSGatlas-transcript-670,BSGatlas-transcript-671;comment="Mn catalase fragment; N-terminal part of YhdU";subtiwiki_category="SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydhU/2";derives_from=BSGatlas-gene-718 basu168 BSGatlas UTR 634777 634817 . - . ID=BSGatlas-5'UTR-398;Parent=BSGatlas-transcript-668,BSGatlas-transcript-670,BSGatlas-transcript-671;comment="5'UTR" basu168 BSGatlas transcript 634920 635186 . + . ID=BSGatlas-transcript-672;color=#FF9900;Parent=BSGatlas-gene-719;comment="Based on: BSGatlas" basu168 BSGatlas UTR 634920 635108 . + . ID=BSGatlas-5'UTR-399;Parent=BSGatlas-transcript-672;comment="5'UTR" basu168 BSGatlas transcript 634978 635186 . + . ID=BSGatlas-transcript-674;color=#FF9900;Parent=BSGatlas-gene-719;comment="Based on: BSGatlas" basu168 BSGatlas UTR 634978 635108 . + . ID=BSGatlas-5'UTR-400;Parent=BSGatlas-transcript-674;comment="5'UTR" basu168 BSGatlas transcript 635022 635186 . + . ID=BSGatlas-transcript-675;color=#FF9900;Parent=BSGatlas-gene-719;comment="Based on: BSGatlas" basu168 BSGatlas UTR 635022 635108 . + . ID=BSGatlas-5'UTR-401;Parent=BSGatlas-transcript-675;comment="5'UTR" basu168 BSGatlas gene 635109 635186 . + . ID=BSGatlas-gene-719;color=#FFFF00;Name=trnE-Arg;locus_tag=BSU_tRNA_79,BSU_TRNA_79 basu168 BSGatlas tRNA 635109 635186 . + . ID=BSGatlas-gene-719_transcribed;color=#FFFF00;Name=trnE-Arg;Parent=BSGatlas-transcript-672,BSGatlas-transcript-674,BSGatlas-transcript-675;comment="tRNA-Arg";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnE-Arg";derives_from=BSGatlas-gene-719 basu168 BSGatlas gene 635199 635273 . + . ID=BSGatlas-gene-720;color=#FFFF00;Name=trnE-Gly;locus_tag=BSU_tRNA_80,BSU_TRNA_80 basu168 BSGatlas tRNA 635199 635273 . + . ID=BSGatlas-gene-720_transcribed;color=#FFFF00;Name=trnE-Gly;comment="tRNA-Gly";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnE-Gly";derives_from=BSGatlas-gene-720 basu168 BSGatlas gene 635371 635438 . - . ID=BSGatlas-gene-721;color=#24B324;Name=Bacillaceae-1 basu168 BSGatlas sRNA 635371 635438 . - . ID=BSGatlas-gene-721_transcribed;color=#24B324;Name=Bacillaceae-1;derives_from=BSGatlas-gene-721 basu168 BSGatlas transcript 635433 640254 . + . ID=BSGatlas-transcript-676;color=#FF9900;Parent=BSGatlas-gene-722,BSGatlas-gene-723,BSGatlas-gene-724;comment="Based on: SubtiWiki" basu168 BSGatlas gene 635433 636987 . + . ID=BSGatlas-gene-722;color=#CC33FF;Name=rrnE-16S;locus_tag=BSU_rRNA_30,BSU_RRNA_30 basu168 BSGatlas rRNA 635433 636987 . + . ID=BSGatlas-gene-722_transcribed;color=#CC33FF;Name=rrnE-16S;Parent=BSGatlas-transcript-676;comment="ribosomal RNA-16S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnE-16S";derives_from=BSGatlas-gene-722 basu168 BSGatlas UTR 636988 637153 . + . ID=BSGatlas-internal_UTR-199;Parent=BSGatlas-transcript-676;comment="internal_UTR" basu168 BSGatlas gene 637154 640082 . + . ID=BSGatlas-gene-723;color=#CC33FF;Name=rrnE-23S;locus_tag=BSU_rRNA_12,BSU_RRNA_12 basu168 BSGatlas rRNA 637154 640082 . + . ID=BSGatlas-gene-723_transcribed;color=#CC33FF;Name=rrnE-23S;Parent=BSGatlas-transcript-676;comment="ribosomal RNA-23S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnE-23S";derives_from=BSGatlas-gene-723 basu168 BSGatlas UTR 640083 640136 . + . ID=BSGatlas-internal_UTR-200;Parent=BSGatlas-transcript-676;comment="internal_UTR" basu168 BSGatlas gene 640137 640254 . + . ID=BSGatlas-gene-724;color=#CC33FF;Name=rrnE-5S;locus_tag=BSU_rRNA_13,BSU_RRNA_13 basu168 BSGatlas rRNA 640137 640254 . + . ID=BSGatlas-gene-724_transcribed;color=#CC33FF;Name=rrnE-5S;Parent=BSGatlas-transcript-676;comment="ribosomal RNA-5S";kegg_pathways="Ribosome (ko03010)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.1 Ribosomal RNA";synonyms="rrnE-5S";derives_from=BSGatlas-gene-724 basu168 BSGatlas gene 640267 640344 . + . ID=BSGatlas-gene-725;color=#FFFF00;Name=trnE-Met;locus_tag=BSU_tRNA_21,BSU_TRNA_21 basu168 BSGatlas tRNA 640267 640344 . + . ID=BSGatlas-gene-725_transcribed;color=#FFFF00;Name=trnE-Met;comment="tRNA-Met";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnE-Met";derives_from=BSGatlas-gene-725 basu168 BSGatlas transcript 640404 640500 . + . ID=BSGatlas-transcript-677;color=#FF9900;Parent=BSGatlas-gene-726;comment="Based on: BSGatlas" basu168 BSGatlas gene 640404 640481 . + . ID=BSGatlas-gene-726;color=#FFFF00;Name=trnE-Asp;locus_tag=BSU_tRNA_22,BSU_TRNA_22 basu168 BSGatlas tRNA 640404 640481 . + . ID=BSGatlas-gene-726_transcribed;color=#FFFF00;Name=trnE-Asp;Parent=BSGatlas-transcript-677;comment="tRNA-Asp";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.7 tRNA";synonyms="trnE-Asp";derives_from=BSGatlas-gene-726 basu168 BSGatlas UTR 640482 640500 . + . ID=BSGatlas-3'UTR-238;Parent=BSGatlas-transcript-677;comment="3'UTR" basu168 BSGatlas transcript 640606 644298 . + . ID=BSGatlas-transcript-678;color=#FF9900;Parent=BSGatlas-gene-727,BSGatlas-gene-728,BSGatlas-gene-729,BSGatlas-gene-730,BSGatlas-gene-731;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 640606 640661 . + . ID=BSGatlas-5'UTR-402;Parent=BSGatlas-transcript-678;comment="5'UTR" basu168 BSGatlas gene 640662 641639 . + . ID=BSGatlas-gene-727;color=#1E90FF;Name=thiL;locus_tag=BSU_05900,BSU05900 basu168 BSGatlas CDS 640662 641639 . + 0 ID=BSGatlas-gene-727_transcribed;color=#1E90FF;Name=thiL;Parent=BSGatlas-transcript-678;comment="thiamine-monophosphate kinase";ec="2.7.4.16,EC-2.7.4.16";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0003824 catalytic activity,GO:0005524 ATP binding,GO:0009030 thiamine-phosphate kinase activity,GO:0009228 thiamine biosynthetic process,GO:0009229 thiamine diphosphate biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0046872 metal ion binding";kegg_pathways="Metabolic pathways (ko01100),Thiamine metabolism (ko00730)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.3 Biosynthesis/ acquisition of thiamine";synonyms="thiL,ydiA,ydxA";derives_from=BSGatlas-gene-727 basu168 BSGatlas gene 641654 642130 . + . ID=BSGatlas-gene-728;color=#1E90FF;Name=tsaE;locus_tag=BSU_05910,BSU05910 basu168 BSGatlas CDS 641654 642130 . + 0 ID=BSGatlas-gene-728_transcribed;color=#1E90FF;Name=tsaE;Parent=BSGatlas-transcript-678;comment="tRNA(NNU) t(6)A37 threonylcarbamoyladenosinemodification; ADP binding protein";ec="EC-3.6.4.13";go="GO:0000166 nucleotide binding,GO:0002949 tRNA threonylcarbamoyladenosine modification,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0008033 tRNA processing,GO:0016887 ATPase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="tsaE,ydiB";derives_from=BSGatlas-gene-728 basu168 BSGatlas gene 642111 642800 . + . ID=BSGatlas-gene-729;color=#1E90FF;Name=tsaB;locus_tag=BSU_05920,BSU05920 basu168 BSGatlas CDS 642111 642800 . + 0 ID=BSGatlas-gene-729_transcribed;color=#1E90FF;Name=tsaB;Parent=BSGatlas-transcript-678;comment="tRNA(NNU) t(6)A37 threonylcarbamoyladenosinemodification; protease involved in TsaD function";go="GO:0002949 tRNA threonylcarbamoyladenosine modification,GO:0005737 cytoplasm,GO:0008033 tRNA processing";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="tsaB,ydiC";derives_from=BSGatlas-gene-729 basu168 BSGatlas gene 642810 643265 . + . ID=BSGatlas-gene-730;color=#1E90FF;Name=ydiD;locus_tag=BSU_05930,BSU05930 basu168 BSGatlas CDS 642810 643265 . + 0 ID=BSGatlas-gene-730_transcribed;color=#1E90FF;Name=ydiD;Parent=BSGatlas-transcript-678;comment="ribosomal protein S18 alanineN-acetyltransferase";ec="2.3.1.128,EC-2.3.1";go="GO:0005737 cytoplasm,GO:0006474 N-terminal protein amino acid acetylation,GO:0008080 N-acetyltransferase activity,GO:0008999 ribosomal-protein-alanine N-acetyltransferase activity,GO:0016407 acetyltransferase activity,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.13 Translation/ other/ based on similarity,SW 3.3.4 Protein modification,SW 3.3.4.6 Protein acetylase/ deacetylase/ based on similarity";synonyms="rimI,ydiD";derives_from=BSGatlas-gene-730 basu168 BSGatlas gene 643258 644298 . + . ID=BSGatlas-gene-731;color=#1E90FF;Name=tsaD;locus_tag=BSU_05940,BSU05940 basu168 BSGatlas CDS 643258 644298 . + 0 ID=BSGatlas-gene-731_transcribed;color=#1E90FF;Name=tsaD;Parent=BSGatlas-transcript-678;comment="tRNA(NNU) t(6)A37 threonylcarbamoyladenosinemodification; glycation binding protein";ec="2.3.1.234";go="GO:0002949 tRNA threonylcarbamoyladenosine modification,GO:0004222 metalloendopeptidase activity,GO:0005506 iron ion binding,GO:0005737 cytoplasm,GO:0008033 tRNA processing,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups,GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups,GO:0046872 metal ion binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.5 Universally conserved proteins";synonyms="gcp,tsaD,ydiE";derives_from=BSGatlas-gene-731 basu168 BSGatlas transcript 644528 646488 . - . ID=BSGatlas-transcript-679;color=#B37924;Parent=BSGatlas-gene-732;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 644528 646456 . - . ID=BSGatlas-gene-732;color=#3474B3;Name=ydiF;locus_tag=BSU_05950,BSU05950 basu168 BSGatlas CDS 644528 646456 . - 0 ID=BSGatlas-gene-732_transcribed;color=#3474B3;Name=ydiF;Parent=BSGatlas-transcript-679;comment="putative energy-sensing inhibitor oftranslation";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters";synonyms="ydiF";derives_from=BSGatlas-gene-732 basu168 BSGatlas transcript 646218 648704 . + . ID=BSGatlas-transcript-680;color=#FF9900;Parent=BSGatlas-gene-733,BSGatlas-gene-734,BSGatlas-gene-735,BSGatlas-gene-736;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 646218 646581 . + . ID=BSGatlas-5'UTR-403;Parent=BSGatlas-transcript-680;comment="5'UTR" basu168 BSGatlas transcript 646411 648704 . + . ID=BSGatlas-transcript-681;color=#FF9900;Parent=BSGatlas-gene-733,BSGatlas-gene-734,BSGatlas-gene-735,BSGatlas-gene-736;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 646411 646581 . + . ID=BSGatlas-5'UTR-404;Parent=BSGatlas-transcript-681;comment="5'UTR" basu168 BSGatlas UTR 646457 646488 . - . ID=BSGatlas-5'UTR-405;Parent=BSGatlas-transcript-679;comment="5'UTR" basu168 BSGatlas gene 646582 647094 . + . ID=BSGatlas-gene-733;color=#1E90FF;Name=ydiG;locus_tag=BSU_05960,BSU05960 basu168 BSGatlas CDS 646582 647094 . + 0 ID=BSGatlas-gene-733_transcribed;color=#1E90FF;Name=ydiG;Parent=BSGatlas-transcript-680,BSGatlas-transcript-681;comment="molybdenum cofactor biosynthesis protein C";ec="4.6.1.17";go="GO:0006777 Mo-molybdopterin cofactor biosynthetic process";kegg_pathways="Folate biosynthesis (ko00790),Metabolic pathways (ko01100),Sulfur relay system (ko04122)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.2 Biosynthesis of cofactors,SW 2.6.2.10 Biosynthesis of molybdopterin";synonyms="ydiG";derives_from=BSGatlas-gene-733 basu168 BSGatlas gene 647091 647738 . + . ID=BSGatlas-gene-734;color=#1E90FF;Name=rex;locus_tag=BSU_05970,BSU05970 basu168 BSGatlas CDS 647091 647738 . + 0 ID=BSGatlas-gene-734_transcribed;color=#1E90FF;Name=rex;Parent=BSGatlas-transcript-680,BSGatlas-transcript-681;comment="transcription repressor of cydABCD and yjlC-ndhexpression";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0034301 endospore formation,GO:0045892 negative regulation of transcription, DNA-templated,GO:0048037 cofactor binding,GO:0050662 coenzyme binding,GO:0051775 response to redox state,GO:0070403 NAD+ binding,GO:0070404 NADH binding";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.1 Regulators of electron transport,SW 2.2 Carbon metabolism,SW 2.2.1 Carbon core metabolism,SW 2.2.1.5 Overflow metabolism,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="rex,ydiH";derives_from=BSGatlas-gene-734 basu168 BSGatlas transcript 647628 648704 . + . ID=BSGatlas-transcript-682;color=#FF9900;Parent=BSGatlas-gene-735,BSGatlas-gene-736;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 647628 647759 . + . ID=BSGatlas-5'UTR-406;Parent=BSGatlas-transcript-682;comment="5'UTR" basu168 BSGatlas UTR 647739 647759 . + . ID=BSGatlas-internal_UTR-201;Parent=BSGatlas-transcript-680,BSGatlas-transcript-681;comment="internal_UTR" basu168 BSGatlas gene 647760 647933 . + . ID=BSGatlas-gene-735;color=#1E90FF;Name=tatAY;locus_tag=BSU_05980,BSU05980 basu168 BSGatlas CDS 647760 647933 . + 0 ID=BSGatlas-gene-735_transcribed;color=#1E90FF;Name=tatAY;Parent=BSGatlas-transcript-680,BSGatlas-transcript-681,BSGatlas-transcript-682;comment="component of the twin-arginine pre-proteintranslocation pathway";go="GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0005886 plasma membrane,GO:0005887 integral component of plasma membrane,GO:0006810 transport,GO:0008320 protein transmembrane transporter activity,GO:0008565 protein transporter activity,GO:0009306 protein secretion,GO:0015031 protein transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0033281 TAT protein transport complex,GO:0043953 protein transport by the Tat complex";kegg_pathways="Bacterial secretion system (ko03070),Protein export (ko03060)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tatAY,ydiI";derives_from=BSGatlas-gene-735 basu168 BSGatlas gene 647940 648704 . + . ID=BSGatlas-gene-736;color=#1E90FF;Name=tatCY;locus_tag=BSU_05990,BSU05990 basu168 BSGatlas CDS 647940 648704 . + 0 ID=BSGatlas-gene-736_transcribed;color=#1E90FF;Name=tatCY;Parent=BSGatlas-transcript-680,BSGatlas-transcript-681,BSGatlas-transcript-682;comment="component of the twin-arginine pre-proteintranslocation pathway";go="GO:0005886 plasma membrane,GO:0005887 integral component of plasma membrane,GO:0006810 transport,GO:0008320 protein transmembrane transporter activity,GO:0015031 protein transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0033281 TAT protein transport complex,GO:0043953 protein transport by the Tat complex";kegg_pathways="Bacterial secretion system (ko03070),Protein export (ko03060)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.5 Protein secretion,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="tatCY,ydiJ";derives_from=BSGatlas-gene-736 basu168 BSGatlas transcript 648742 649721 . - . ID=BSGatlas-transcript-683;color=#B37924;Parent=BSGatlas-gene-738,BSGatlas-gene-737;comment="Based on: SubtiWiki" basu168 BSGatlas gene 648742 648933 . - . ID=BSGatlas-gene-737;color=#3474B3;Name=ydiK;locus_tag=BSU_06000,BSU06000 basu168 BSGatlas CDS 648742 648933 . - 0 ID=BSGatlas-gene-737_transcribed;color=#3474B3;Name=ydiK;Parent=BSGatlas-transcript-683;comment="conserved hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydiK";derives_from=BSGatlas-gene-737 basu168 BSGatlas gene 648930 649664 . - . ID=BSGatlas-gene-738;color=#3474B3;Name=ydiL;locus_tag=BSU_06010,BSU06010 basu168 BSGatlas CDS 648930 649664 . - 0 ID=BSGatlas-gene-738_transcribed;color=#3474B3;Name=ydiL;Parent=BSGatlas-transcript-683;comment="putative membrane protease";ec="3.4.-.-";go="GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydiL";derives_from=BSGatlas-gene-738 basu168 BSGatlas UTR 649665 649721 . - . ID=BSGatlas-5'UTR-408;Parent=BSGatlas-transcript-683;comment="5'UTR" basu168 BSGatlas transcript 649696 651996 . + . ID=BSGatlas-transcript-685;color=#FF9900;Parent=BSGatlas-gene-739,BSGatlas-gene-740;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 649696 651940 . + . ID=BSGatlas-transcript-4935;color=#FF9900;Parent=BSGatlas-gene-739,BSGatlas-gene-740;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 649696 649902 . + . ID=BSGatlas-5'UTR-409;Parent=BSGatlas-transcript-4935,BSGatlas-transcript-685;comment="5'UTR" basu168 BSGatlas transcript 649837 651996 . + . ID=BSGatlas-transcript-686;color=#FF9900;Parent=BSGatlas-gene-739,BSGatlas-gene-740;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 649837 651940 . + . ID=BSGatlas-transcript-4936;color=#FF9900;Parent=BSGatlas-gene-739,BSGatlas-gene-740;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 649837 649902 . + . ID=BSGatlas-5'UTR-410;Parent=BSGatlas-transcript-4936,BSGatlas-transcript-686;comment="5'UTR" basu168 BSGatlas gene 649903 650187 . + . ID=BSGatlas-gene-739;color=#1E90FF;Name=groES;locus_tag=BSU_06020,BSU06020 basu168 BSGatlas CDS 649903 650187 . + 0 ID=BSGatlas-gene-739_transcribed;color=#1E90FF;Name=groES;Parent=BSGatlas-transcript-4935,BSGatlas-transcript-685,BSGatlas-transcript-4936,BSGatlas-transcript-686;comment="chaperonin small subunit";go="GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006457 protein folding,GO:0006950 response to stress";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.2 Chaperones/ protein folding,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.4 Heat shock proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.5 Universally conserved proteins";synonyms="groES";derives_from=BSGatlas-gene-739 basu168 BSGatlas UTR 650188 650233 . + . ID=BSGatlas-internal_UTR-202;Parent=BSGatlas-transcript-4935,BSGatlas-transcript-685,BSGatlas-transcript-4936,BSGatlas-transcript-686;comment="internal_UTR" basu168 BSGatlas gene 650234 651868 . + . ID=BSGatlas-gene-740;color=#1E90FF;Name=groEL;locus_tag=BSU_06030,BSU06030 basu168 BSGatlas CDS 650234 651868 . + 0 ID=BSGatlas-gene-740_transcribed;color=#1E90FF;Name=groEL;Parent=BSGatlas-transcript-4935,BSGatlas-transcript-685,BSGatlas-transcript-4936,BSGatlas-transcript-686;comment="chaperonin large subunit";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006457 protein folding,GO:0006950 response to stress,GO:0042026 protein refolding,GO:0044267 cellular protein metabolic process,GO:0051082 unfolded protein binding";kegg_pathways="RNA degradation (ko03018)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.2 Chaperones/ protein folding,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.4 Heat shock proteins,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.4.8 Phosphorylation on either a Ser, Thr or Tyr residue";synonyms="groEL";derives_from=BSGatlas-gene-740 basu168 BSGatlas UTR 651869 651996 . + . ID=BSGatlas-3'UTR-239;Parent=BSGatlas-transcript-685,BSGatlas-transcript-686;comment="3'UTR" basu168 BSGatlas UTR 651869 651940 . + . ID=BSGatlas-3'UTR-1655;Parent=BSGatlas-transcript-4935,BSGatlas-transcript-4936;comment="3'UTR" basu168 BSGatlas gene 651977 652084 . - . ID=BSGatlas-gene-741;color=#3474B3;Name=ydzT/1;locus_tag=BSU_06033 basu168 BSGatlas CDS 651977 652084 . - 0 ID=BSGatlas-gene-741_transcribed;color=#3474B3;Name=ydzT/1;comment="hypothetical protein; putative integrase(fragment); C-terminal part of YdzT; defective prophage 3";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzT/1";derives_from=BSGatlas-gene-741 basu168 BSGatlas gene 652087 652245 . - . ID=BSGatlas-gene-742;color=#3474B3;Name=ydzT/2;locus_tag=BSU_06034 basu168 BSGatlas CDS 652087 652245 . - 0 ID=BSGatlas-gene-742_transcribed;color=#3474B3;Name=ydzT/2;comment="hypothetical protein; putative integrase(fragment); internal part of YdzT";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzT/2";derives_from=BSGatlas-gene-742 basu168 BSGatlas gene 652290 652418 . - . ID=BSGatlas-gene-743;color=#3474B3;Name=ydzT/3;locus_tag=BSU_06036 basu168 BSGatlas CDS 652290 652418 . - 0 ID=BSGatlas-gene-743_transcribed;color=#3474B3;Name=ydzT/3;comment="hypothetical protein; putative integrase(fragment); internal part of YdzT";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzT/3";derives_from=BSGatlas-gene-743 basu168 BSGatlas gene 652511 652720 . - . ID=BSGatlas-gene-744;color=#3474B3;Name=ydzT/4;locus_tag=BSU_06037 basu168 BSGatlas CDS 652511 652720 . - 0 ID=BSGatlas-gene-744_transcribed;color=#3474B3;Name=ydzT/4;comment="hypothetical protein; putative integrase(fragment); internal part of YdzT";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzT/4";derives_from=BSGatlas-gene-744 basu168 BSGatlas gene 652713 653018 . - . ID=BSGatlas-gene-745;color=#3474B3;Name=ydzT/5;locus_tag=BSU_06038 basu168 BSGatlas CDS 652713 653018 . - 0 ID=BSGatlas-gene-745_transcribed;color=#3474B3;Name=ydzT/5;comment="hypothetical protein; putative integrase(fragment); N-terminal part of YdzT; defective prophage 3";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzT/5";derives_from=BSGatlas-gene-745 basu168 BSGatlas gene 653432 653812 . + . ID=BSGatlas-gene-746;color=#1E90FF;Name=ydiM;locus_tag=BSU_06040,BSU06040 basu168 BSGatlas CDS 653432 653812 . + 0 ID=BSGatlas-gene-746_transcribed;color=#1E90FF;Name=ydiM;comment="hypothetical protein; prophage 3 region";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydiM";derives_from=BSGatlas-gene-746 basu168 BSGatlas gene 654071 654343 . + . ID=BSGatlas-gene-747;color=#1E90FF;Name=ydzU;locus_tag=BSU_06048,BSU06048 basu168 BSGatlas CDS 654071 654343 . + 0 ID=BSGatlas-gene-747_transcribed;color=#1E90FF;Name=ydzU;comment="hypothetical protein; prophage 3 region";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzU";derives_from=BSGatlas-gene-747 basu168 BSGatlas gene 654333 654692 . + . ID=BSGatlas-gene-748;color=#1E90FF;Name=ydzV;locus_tag=BSU_06049 basu168 BSGatlas CDS 654333 654692 . + 0 ID=BSGatlas-gene-748_transcribed;color=#1E90FF;Name=ydzV;comment="conserved hypothetical protein; phage terminase(fragment); defective prophage 3";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzV";derives_from=BSGatlas-gene-748 basu168 BSGatlas gene 654978 655193 . + . ID=BSGatlas-gene-749;color=#1E90FF;Name=ydiN;locus_tag=BSU_06050 basu168 BSGatlas CDS 654978 655193 . + 0 ID=BSGatlas-gene-749_transcribed;color=#1E90FF;Name=ydiN;comment="putative N-terminus of restriction enzyme;defective prophage 3";synonyms="NA,ydiN";derives_from=BSGatlas-gene-749 basu168 BSGatlas transcript 655138 657770 . + . ID=BSGatlas-transcript-688;color=#FF9900;Parent=BSGatlas-gene-750,BSGatlas-gene-751;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 655138 657725 . + . ID=BSGatlas-transcript-687;color=#FF9900;Parent=BSGatlas-gene-750,BSGatlas-gene-751;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 655138 655222 . + . ID=BSGatlas-5'UTR-411;Parent=BSGatlas-transcript-687,BSGatlas-transcript-688;comment="5'UTR" basu168 BSGatlas gene 655223 656506 . + . ID=BSGatlas-gene-750;color=#1E90FF;Name=ydiO;locus_tag=BSU_06060,BSU06060 basu168 BSGatlas CDS 655223 656506 . + 0 ID=BSGatlas-gene-750_transcribed;color=#1E90FF;Name=ydiO;Parent=BSGatlas-transcript-687,BSGatlas-transcript-688;comment="DNA-methyltransferase (cytosine-specific);prophage 3 region";ec="2.1.1.37";go="GO:0003677 DNA binding,GO:0003886 DNA (cytosine-5-)-methyltransferase activity,GO:0006306 DNA methylation,GO:0008168 methyltransferase activity,GO:0009307 DNA restriction-modification system,GO:0016740 transferase activity,GO:0032259 methylation,GO:0032776 DNA methylation on cytosine,GO:0090116 C-5 methylation of cytosine";kegg_pathways="Cysteine and methionine metabolism (ko00270),Metabolic pathways (ko01100)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.4 DNA restriction/ modification,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="ydiO";derives_from=BSGatlas-gene-750 basu168 BSGatlas UTR 656507 656527 . + . ID=BSGatlas-internal_UTR-203;Parent=BSGatlas-transcript-687,BSGatlas-transcript-688;comment="internal_UTR" basu168 BSGatlas gene 656528 657697 . + . ID=BSGatlas-gene-751;color=#1E90FF;Name=ydiP;locus_tag=BSU_06070,BSU06070 basu168 BSGatlas CDS 656528 657697 . + 0 ID=BSGatlas-gene-751_transcribed;color=#1E90FF;Name=ydiP;Parent=BSGatlas-transcript-687,BSGatlas-transcript-688;comment="DNA-methyltransferase (cytosine-specific);defective prophage 3";ec="2.1.1.37";go="GO:0003677 DNA binding,GO:0003886 DNA (cytosine-5-)-methyltransferase activity,GO:0006306 DNA methylation,GO:0008168 methyltransferase activity,GO:0009307 DNA restriction-modification system,GO:0016740 transferase activity,GO:0032259 methylation,GO:0032776 DNA methylation on cytosine,GO:0090116 C-5 methylation of cytosine";kegg_pathways="Cysteine and methionine metabolism (ko00270),Metabolic pathways (ko01100)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.4 DNA restriction/ modification,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="ydiP";derives_from=BSGatlas-gene-751 basu168 BSGatlas UTR 657698 657770 . + . ID=BSGatlas-3'UTR-241;Parent=BSGatlas-transcript-688;comment="3'UTR" basu168 BSGatlas UTR 657698 657725 . + . ID=BSGatlas-3'UTR-240;Parent=BSGatlas-transcript-687;comment="3'UTR" basu168 BSGatlas transcript 657755 658062 . - . ID=BSGatlas-transcript-689;color=#B37924;Parent=BSGatlas-gene-752;comment="Based on: BSGatlas" basu168 BSGatlas UTR 657755 657792 . - . ID=BSGatlas-3'UTR-242;Parent=BSGatlas-transcript-689;comment="3'UTR" basu168 BSGatlas gene 657793 658062 . - . ID=BSGatlas-gene-752;color=#3474B3;Name=ydzW/1;locus_tag=BSU_06073 basu168 BSGatlas CDS 657793 658062 . - 0 ID=BSGatlas-gene-752_transcribed;color=#3474B3;Name=ydzW/1;Parent=BSGatlas-transcript-689;comment="putative phosphoglucomutase; C-terminal part ofYdzW; defective prophage 3";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzW/1";derives_from=BSGatlas-gene-752 basu168 BSGatlas gene 658061 658189 . - . ID=BSGatlas-gene-753;color=#3474B3;Name=ydzW/2;locus_tag=BSU_06074 basu168 BSGatlas CDS 658061 658189 . - 0 ID=BSGatlas-gene-753_transcribed;color=#3474B3;Name=ydzW/2;comment="putative phosphoglucomutase; internal part ofYdzW";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzW/2";derives_from=BSGatlas-gene-753 basu168 BSGatlas gene 658189 658605 . - . ID=BSGatlas-gene-754;color=#3474B3;Name=ydzW/3;locus_tag=BSU_06076 basu168 BSGatlas CDS 658189 658605 . - 0 ID=BSGatlas-gene-754_transcribed;color=#3474B3;Name=ydzW/3;comment="putative phosphoglucomutase; internal part ofYdzW";ec="5.4.2.-";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzW/3";derives_from=BSGatlas-gene-754 basu168 BSGatlas gene 658495 658899 . + . ID=BSGatlas-gene-755;color=#CC0000;Name=S214;locus_tag=new_658495_658899 basu168 BSGatlas transcript 658495 658899 . + . ID=BSGatlas-transcript-690;color=#FF9900;Parent=BSGatlas-gene-755;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 658495 658899 . + . ID=BSGatlas-gene-755_transcribed;color=#CC0000;Name=S214;Parent=BSGatlas-transcript-690;synonyms="S214";derives_from=BSGatlas-gene-755 basu168 BSGatlas gene 658615 658758 . - . ID=BSGatlas-gene-756;color=#3474B3;Name=ydzW/4;locus_tag=BSU_06077 basu168 BSGatlas CDS 658615 658758 . - 0 ID=BSGatlas-gene-756_transcribed;color=#3474B3;Name=ydzW/4;comment="putative phosphomannomutase; internal part ofYdzW";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzW/4";derives_from=BSGatlas-gene-756 basu168 BSGatlas gene 658813 659010 . - . ID=BSGatlas-gene-757;color=#3474B3;Name=ydzW/5;locus_tag=BSU_06078 basu168 BSGatlas CDS 658813 659010 . - 0 ID=BSGatlas-gene-757_transcribed;color=#3474B3;Name=ydzW/5;comment="putative phosphoglucomutase; internal part ofYdzW";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzW/5";derives_from=BSGatlas-gene-757 basu168 BSGatlas gene 659010 659129 . - . ID=BSGatlas-gene-758;color=#3474B3;Name=ydzW/6;locus_tag=BSU_06079 basu168 BSGatlas CDS 659010 659129 . - 0 ID=BSGatlas-gene-758_transcribed;color=#3474B3;Name=ydzW/6;comment="putative phosphomannomutase; internal part ofYdzW";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzW/6";derives_from=BSGatlas-gene-758 basu168 BSGatlas transcript 659129 659558 . - . ID=BSGatlas-transcript-692;color=#B37924;Parent=BSGatlas-gene-759;comment="Based on: BSGatlas" basu168 BSGatlas transcript 659129 659341 . - . ID=BSGatlas-transcript-4937;color=#B37924;Parent=BSGatlas-gene-759;comment="Based on: BSGatlas" basu168 BSGatlas gene 659129 659221 . - . ID=BSGatlas-gene-759;color=#3474B3;Name=ydzW/7;locus_tag=BSU_06083 basu168 BSGatlas CDS 659129 659221 . - 0 ID=BSGatlas-gene-759_transcribed;color=#3474B3;Name=ydzW/7;Parent=BSGatlas-transcript-4937,BSGatlas-transcript-692;comment="putative phosphomannomutase; N-terminal part ofYdzW; defective prophage 3";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="ydzW/7";derives_from=BSGatlas-gene-759 basu168 BSGatlas UTR 659222 659558 . - . ID=BSGatlas-5'UTR-2827;Parent=BSGatlas-transcript-692;comment="5'UTR" basu168 BSGatlas UTR 659222 659341 . - . ID=BSGatlas-5'UTR-2826;Parent=BSGatlas-transcript-4937;comment="5'UTR" basu168 BSGatlas transcript 659560 663265 . + . ID=BSGatlas-transcript-693;color=#FF9900;Parent=BSGatlas-gene-761,BSGatlas-gene-762,BSGatlas-gene-763;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 659560 663203 . + . ID=BSGatlas-transcript-4938;color=#FF9900;Parent=BSGatlas-gene-761,BSGatlas-gene-762,BSGatlas-gene-763;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 659560 659622 . + . ID=BSGatlas-5'UTR-413;Parent=BSGatlas-transcript-4938,BSGatlas-transcript-693;comment="5'UTR" basu168 BSGatlas gene 659623 660564 . + . ID=BSGatlas-gene-761;color=#1E90FF;Name=ydiR;locus_tag=BSU_06090,BSU06090 basu168 BSGatlas CDS 659623 660564 . + 0 ID=BSGatlas-gene-761_transcribed;color=#1E90FF;Name=ydiR;Parent=BSGatlas-transcript-4938,BSGatlas-transcript-693;comment="type-2 restriction enzyme BsuMI component BsuRA(YdiR); prophage region 3";ec="3.1.21.4";go="GO:0000737 DNA catabolic process, endonucleolytic,GO:0004518 nuclease activity,GO:0004519 endonuclease activity,GO:0009036 type II site-specific deoxyribonuclease activity,GO:0009307 DNA restriction-modification system,GO:0016787 hydrolase activity,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.4 DNA restriction/ modification,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3";synonyms="ydiR";derives_from=BSGatlas-gene-761 basu168 BSGatlas UTR 660565 660595 . + . ID=BSGatlas-internal_UTR-204;Parent=BSGatlas-transcript-4938,BSGatlas-transcript-693;comment="internal_UTR" basu168 BSGatlas gene 660596 661627 . + . ID=BSGatlas-gene-762;color=#1E90FF;Name=ydiS;locus_tag=BSU_06100,BSU06100 basu168 BSGatlas CDS 660596 661627 . + 0 ID=BSGatlas-gene-762_transcribed;color=#1E90FF;Name=ydiS;Parent=BSGatlas-transcript-4938,BSGatlas-transcript-693;comment="type-2 restriction enzyme BsuMI component BsuRB(YdiS); prophage region 3";ec="3.1.21.4";go="GO:0000737 DNA catabolic process, endonucleolytic,GO:0004518 nuclease activity,GO:0004519 endonuclease activity,GO:0005524 ATP binding,GO:0009036 type II site-specific deoxyribonuclease activity,GO:0009307 DNA restriction-modification system,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.4 DNA restriction/ modification,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3";synonyms="ydiS";derives_from=BSGatlas-gene-762 basu168 BSGatlas gene 661630 663027 . + . ID=BSGatlas-gene-763;color=#1E90FF;Name=ydjA;locus_tag=BSU_06110,BSU06110 basu168 BSGatlas CDS 661630 663027 . + 0 ID=BSGatlas-gene-763_transcribed;color=#1E90FF;Name=ydjA;Parent=BSGatlas-transcript-4938,BSGatlas-transcript-693;comment="type-2 restriction enzyme BsuMI component BsuRC(YdjA); prophage region 3";ec="3.1.21.4";go="GO:0000737 DNA catabolic process, endonucleolytic,GO:0004518 nuclease activity,GO:0004519 endonuclease activity,GO:0009036 type II site-specific deoxyribonuclease activity,GO:0009307 DNA restriction-modification system,GO:0016787 hydrolase activity,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.4 DNA restriction/ modification,SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3";synonyms="ydjA";derives_from=BSGatlas-gene-763 basu168 BSGatlas UTR 663028 663265 . + . ID=BSGatlas-3'UTR-243;Parent=BSGatlas-transcript-693;comment="3'UTR" basu168 BSGatlas UTR 663028 663203 . + . ID=BSGatlas-3'UTR-1656;Parent=BSGatlas-transcript-4938;comment="3'UTR" basu168 BSGatlas gene 663601 663936 . + . ID=BSGatlas-gene-765;color=#1E90FF;Name=ydjB;locus_tag=BSU_06120,BSU06120 basu168 BSGatlas CDS 663601 663936 . + 0 ID=BSGatlas-gene-765_transcribed;color=#1E90FF;Name=ydjB;comment="hypothetical protein; prophage region 3";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydjB";derives_from=BSGatlas-gene-765 basu168 BSGatlas transcript 664319 664738 . + . ID=BSGatlas-transcript-695;color=#FF9900;Parent=BSGatlas-gene-766;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 664319 664669 . + . ID=BSGatlas-gene-766;color=#1E90FF;Name=ydjC;locus_tag=BSU_06130,BSU06130 basu168 BSGatlas transcript 664319 664669 . + . ID=BSGatlas-transcript-694;color=#FF9900;Parent=BSGatlas-gene-766;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas CDS 664319 664669 . + 0 ID=BSGatlas-gene-766_transcribed;color=#1E90FF;Name=ydjC;Parent=BSGatlas-transcript-694,BSGatlas-transcript-695;comment="conserved hypothetical protein; prophage region3";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.1 Prophages,SW 5.1.5 Prophage 3,SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydjC";derives_from=BSGatlas-gene-766 basu168 BSGatlas UTR 664670 664738 . + . ID=BSGatlas-3'UTR-244;Parent=BSGatlas-transcript-695;comment="3'UTR" basu168 BSGatlas transcript 664685 667304 . - . ID=BSGatlas-transcript-696;color=#B37924;Parent=BSGatlas-gene-767;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 664685 664774 . - . ID=BSGatlas-3'UTR-245;Parent=BSGatlas-transcript-696;comment="3'UTR" basu168 BSGatlas transcript 664775 667304 . - . ID=BSGatlas-transcript-697;color=#B37924;Parent=BSGatlas-gene-767;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 664775 667264 . - . ID=BSGatlas-gene-767;color=#3474B3;Name=gutR;locus_tag=BSU_06140,BSU06140 basu168 BSGatlas CDS 664775 667264 . - 0 ID=BSGatlas-gene-767_transcribed;color=#3474B3;Name=gutR;Parent=BSGatlas-transcript-696,BSGatlas-transcript-697;comment="transcriptional regulator of the glucitoloperon";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0005524 ATP binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0017111 nucleoside-triphosphatase activity,GO:0043531 ADP binding";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.11 Utilization of glucitol,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="gutR";derives_from=BSGatlas-gene-767 basu168 BSGatlas UTR 667265 667304 . - . ID=BSGatlas-5'UTR-414;Parent=BSGatlas-transcript-696,BSGatlas-transcript-697;comment="5'UTR" basu168 BSGatlas transcript 667402 671049 . + . ID=BSGatlas-transcript-699;color=#FF9900;Parent=BSGatlas-gene-768,BSGatlas-gene-769,BSGatlas-gene-770;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 667402 669992 . + . ID=BSGatlas-transcript-698;color=#FF9900;Parent=BSGatlas-gene-768,BSGatlas-gene-769;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 667402 667465 . + . ID=BSGatlas-5'UTR-415;Parent=BSGatlas-transcript-698,BSGatlas-transcript-699;comment="5'UTR" basu168 BSGatlas gene 667466 668527 . + . ID=BSGatlas-gene-768;color=#1E90FF;Name=gutB;locus_tag=BSU_06150,BSU06150 basu168 BSGatlas CDS 667466 668527 . + 0 ID=BSGatlas-gene-768_transcribed;color=#1E90FF;Name=gutB;Parent=BSGatlas-transcript-698,BSGatlas-transcript-699;comment="glucitol (sorbitol) dehydrogenase";ec="1.1.1.14,EC-1.1.1.14";go="GO:0003939 L-iditol 2-dehydrogenase activity,GO:0008270 zinc ion binding,GO:0016491 oxidoreductase activity,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process";kegg_pathways="Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100),Pentose and glucuronate interconversions (ko00040)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.11 Utilization of glucitol";synonyms="gutB";derives_from=BSGatlas-gene-768 basu168 BSGatlas UTR 668528 668600 . + . ID=BSGatlas-internal_UTR-205;Parent=BSGatlas-transcript-698,BSGatlas-transcript-699;comment="internal_UTR" basu168 BSGatlas gene 668601 669992 . + . ID=BSGatlas-gene-769;color=#1E90FF;Name=gutP;locus_tag=BSU_06160,BSU06160 basu168 BSGatlas CDS 668601 669992 . + 0 ID=BSGatlas-gene-769_transcribed;color=#1E90FF;Name=gutP;Parent=BSGatlas-transcript-698,BSGatlas-transcript-699;comment="H+-glucitol symporter; prophage region 3";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006814 sodium ion transport,GO:0008643 carbohydrate transport,GO:0015293 symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.3 Carbohydrate transporter,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.11 Utilization of glucitol";synonyms="gutP,ydjD";derives_from=BSGatlas-gene-769 basu168 BSGatlas UTR 669993 670086 . + . ID=BSGatlas-internal_UTR-206;Parent=BSGatlas-transcript-699;comment="internal_UTR" basu168 BSGatlas transcript 670045 671049 . + . ID=BSGatlas-transcript-700;color=#FF9900;Parent=BSGatlas-gene-770;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 670045 670086 . + . ID=BSGatlas-5'UTR-416;Parent=BSGatlas-transcript-700;comment="5'UTR" basu168 BSGatlas gene 670087 671049 . + . ID=BSGatlas-gene-770;color=#1E90FF;Name=fruC;locus_tag=BSU_06170,BSU06170 basu168 BSGatlas CDS 670087 671049 . + 0 ID=BSGatlas-gene-770_transcribed;color=#1E90FF;Name=fruC;Parent=BSGatlas-transcript-699,BSGatlas-transcript-700;comment="putative sugar kinase (ribokinase family);prophage region 3";ec="2.7.1.-";go="GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016773 phosphotransferase activity, alcohol group as acceptor";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Biosynthesis of secondary metabolites (ko01110),Fructose and mannose metabolism (ko00051),Metabolic pathways (ko01100),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.19 Utilization of sucrose";synonyms="fruC,ydjE";derives_from=BSGatlas-gene-770 basu168 BSGatlas transcript 671209 674842 . + . ID=BSGatlas-transcript-702;color=#FF9900;Parent=BSGatlas-gene-771,BSGatlas-gene-772,BSGatlas-gene-773,BSGatlas-gene-774;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 671209 671974 . + . ID=BSGatlas-transcript-701;color=#FF9900;Parent=BSGatlas-gene-771;comment="Based on: BSGatlas" basu168 BSGatlas UTR 671209 671244 . + . ID=BSGatlas-5'UTR-417;Parent=BSGatlas-transcript-701,BSGatlas-transcript-702;comment="5'UTR" basu168 BSGatlas gene 671245 671928 . + . ID=BSGatlas-gene-771;color=#1E90FF;Name=pspA;locus_tag=BSU_06180,BSU06180 basu168 BSGatlas CDS 671245 671928 . + 0 ID=BSGatlas-gene-771_transcribed;color=#1E90FF;Name=pspA;Parent=BSGatlas-transcript-701,BSGatlas-transcript-702;comment="phage shock protein A homolog regulator;prophage region 3";go="GO:0006950 response to stress";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="pspA,ydjF";derives_from=BSGatlas-gene-771 basu168 BSGatlas UTR 671929 671993 . + . ID=BSGatlas-internal_UTR-207;Parent=BSGatlas-transcript-702;comment="internal_UTR" basu168 BSGatlas UTR 671929 671974 . + . ID=BSGatlas-3'UTR-246;Parent=BSGatlas-transcript-701;comment="3'UTR" basu168 BSGatlas gene 671994 673019 . + . ID=BSGatlas-gene-772;color=#1E90FF;Name=ydjG;locus_tag=BSU_06190,BSU06190 basu168 BSGatlas CDS 671994 673019 . + 0 ID=BSGatlas-gene-772_transcribed;color=#1E90FF;Name=ydjG;Parent=BSGatlas-transcript-702;comment="putative phage replication protein; prophageregion 3";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydjG";derives_from=BSGatlas-gene-772 basu168 BSGatlas gene 673019 673783 . + . ID=BSGatlas-gene-773;color=#1E90FF;Name=ydjH;locus_tag=BSU_06200,BSU06200 basu168 BSGatlas CDS 673019 673783 . + 0 ID=BSGatlas-gene-773_transcribed;color=#1E90FF;Name=ydjH;Parent=BSGatlas-transcript-702;comment="conserved hypothetical protein; prophage region3";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydjH";derives_from=BSGatlas-gene-773 basu168 BSGatlas UTR 673784 673813 . + . ID=BSGatlas-internal_UTR-208;Parent=BSGatlas-transcript-702;comment="internal_UTR" basu168 BSGatlas gene 673814 674785 . + . ID=BSGatlas-gene-774;color=#1E90FF;Name=ydjI;locus_tag=BSU_06210,BSU06210 basu168 BSGatlas CDS 673814 674785 . + 0 ID=BSGatlas-gene-774_transcribed;color=#1E90FF;Name=ydjI;Parent=BSGatlas-transcript-702;comment="putative phage protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydjI";derives_from=BSGatlas-gene-774 basu168 BSGatlas UTR 674786 674842 . + . ID=BSGatlas-3'UTR-247;Parent=BSGatlas-transcript-702;comment="3'UTR" basu168 BSGatlas transcript 674788 675907 . - . ID=BSGatlas-transcript-703;color=#B37924;Parent=BSGatlas-gene-775;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 674788 674831 . - . ID=BSGatlas-3'UTR-248;Parent=BSGatlas-transcript-703;comment="3'UTR" basu168 BSGatlas gene 674832 675857 . - . ID=BSGatlas-gene-775;color=#3474B3;Name=ydjJ;locus_tag=BSU_06220,BSU06220 basu168 BSGatlas CDS 674832 675857 . - 0 ID=BSGatlas-gene-775_transcribed;color=#3474B3;Name=ydjJ;Parent=BSGatlas-transcript-703;comment="putative membrane associated potassium channel;prophage region 3";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="ydjJ";derives_from=BSGatlas-gene-775 basu168 BSGatlas UTR 675858 675907 . - . ID=BSGatlas-5'UTR-418;Parent=BSGatlas-transcript-703;comment="5'UTR" basu168 BSGatlas transcript 676154 677908 . + . ID=BSGatlas-transcript-704;color=#FF9900;Parent=BSGatlas-gene-776;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 676154 676441 . + . ID=BSGatlas-5'UTR-419;Parent=BSGatlas-transcript-704;comment="5'UTR" basu168 BSGatlas gene 676442 677863 . + . ID=BSGatlas-gene-776;color=#1E90FF;Name=iolT;locus_tag=BSU_06230,BSU06230 basu168 BSGatlas CDS 676442 677863 . + 0 ID=BSGatlas-gene-776_transcribed;color=#1E90FF;Name=iolT;Parent=BSGatlas-transcript-704;comment="myo-inositol transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0022857 transmembrane transporter activity,GO:0022891 NA,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.3 Carbohydrate transporter,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.16 Utilization of inositol,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="iolT,ydjK";derives_from=BSGatlas-gene-776 basu168 BSGatlas transcript 677858 679246 . - . ID=BSGatlas-transcript-4939;color=#B37924;Parent=BSGatlas-gene-777;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 677858 677910 . - . ID=BSGatlas-3'UTR-249;Parent=BSGatlas-transcript-4939;comment="3'UTR" basu168 BSGatlas UTR 677864 677908 . + . ID=BSGatlas-3'UTR-250;Parent=BSGatlas-transcript-704;comment="3'UTR" basu168 BSGatlas gene 677911 678951 . - . ID=BSGatlas-gene-777;color=#3474B3;Name=bdhA;locus_tag=BSU_06240,BSU06240 basu168 BSGatlas CDS 677911 678951 . - 0 ID=BSGatlas-gene-777_transcribed;color=#3474B3;Name=bdhA;Parent=BSGatlas-transcript-4939;comment="acetoin reductase/2,3-butanediol dehydrogenase";ec="1.1.1.4,EC-1.1.1.4";go="GO:0000721 (R,R)-butanediol dehydrogenase activity,GO:0008270 zinc ion binding,GO:0016491 oxidoreductase activity,GO:0034079 butanediol biosynthetic process,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process";kegg_pathways="Butanoate metabolism (ko00650)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.1 Carbon core metabolism,SW 2.2.1.5 Overflow metabolism,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="bdhA,ydjL";derives_from=BSGatlas-gene-777 basu168 BSGatlas transcript 678515 680873 . + . ID=BSGatlas-transcript-708;color=#FF9900;Parent=BSGatlas-gene-779,BSGatlas-gene-780;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 678515 679817 . + . ID=BSGatlas-transcript-707;color=#FF9900;Parent=BSGatlas-gene-779;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 678515 679761 . + . ID=BSGatlas-transcript-706;color=#FF9900;Parent=BSGatlas-gene-779;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 678515 679389 . + . ID=BSGatlas-5'UTR-420;Parent=BSGatlas-transcript-706,BSGatlas-transcript-707,BSGatlas-transcript-708;comment="5'UTR" basu168 BSGatlas UTR 678952 679246 . - . ID=BSGatlas-5'UTR-2828;Parent=BSGatlas-transcript-4939;comment="5'UTR" basu168 BSGatlas transcript 679052 680873 . + . ID=BSGatlas-transcript-711;color=#FF9900;Parent=BSGatlas-gene-779,BSGatlas-gene-780;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 679052 679817 . + . ID=BSGatlas-transcript-710;color=#FF9900;Parent=BSGatlas-gene-779;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 679052 679761 . + . ID=BSGatlas-transcript-709;color=#FF9900;Parent=BSGatlas-gene-779;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 679052 679389 . + . ID=BSGatlas-5'UTR-421;Parent=BSGatlas-transcript-709,BSGatlas-transcript-710,BSGatlas-transcript-711;comment="5'UTR" basu168 BSGatlas transcript 679351 680873 . + . ID=BSGatlas-transcript-715;color=#FF9900;Parent=BSGatlas-gene-779,BSGatlas-gene-780;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 679351 679817 . + . ID=BSGatlas-transcript-714;color=#FF9900;Parent=BSGatlas-gene-779;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 679351 679761 . + . ID=BSGatlas-transcript-713;color=#FF9900;Parent=BSGatlas-gene-779;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 679351 679389 . + . ID=BSGatlas-5'UTR-423;Parent=BSGatlas-transcript-713,BSGatlas-transcript-714,BSGatlas-transcript-715;comment="5'UTR" basu168 BSGatlas gene 679390 679761 . + . ID=BSGatlas-gene-779;color=#1E90FF;Name=ydjM;locus_tag=BSU_06250,BSU06250 basu168 BSGatlas CDS 679390 679761 . + 0 ID=BSGatlas-gene-779_transcribed;color=#1E90FF;Name=ydjM;Parent=BSGatlas-transcript-706,BSGatlas-transcript-707,BSGatlas-transcript-708,BSGatlas-transcript-709,BSGatlas-transcript-710,BSGatlas-transcript-711,BSGatlas-transcript-713,BSGatlas-transcript-714,BSGatlas-transcript-715;comment="protein involved in cell wall metabolism";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.5 Cell wall/ other,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="ydjM,yzvA";derives_from=BSGatlas-gene-779 basu168 BSGatlas UTR 679762 679826 . + . ID=BSGatlas-internal_UTR-209;Parent=BSGatlas-transcript-708,BSGatlas-transcript-711,BSGatlas-transcript-715;comment="internal_UTR" basu168 BSGatlas UTR 679762 679817 . + . ID=BSGatlas-3'UTR-251;Parent=BSGatlas-transcript-707,BSGatlas-transcript-710,BSGatlas-transcript-714;comment="3'UTR" basu168 BSGatlas gene 679827 680873 . + . ID=BSGatlas-gene-780;color=#1E90FF;Name=ydjN;locus_tag=BSU_06260,BSU06260 basu168 BSGatlas CDS 679827 680873 . + 0 ID=BSGatlas-gene-780_transcribed;color=#1E90FF;Name=ydjN;Parent=BSGatlas-transcript-708,BSGatlas-transcript-711,BSGatlas-transcript-715;comment="putative membrane protein";subtiwiki_category="SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.7 Proteins of unknown function";synonyms="ydjN";derives_from=BSGatlas-gene-780 basu168 BSGatlas gene 680907 681065 . - . ID=BSGatlas-gene-781;color=#3474B3;Name=ydzJ;locus_tag=BSU_06269,BSU06269 basu168 BSGatlas transcript 680907 681065 . - . ID=BSGatlas-transcript-716;color=#B37924;Parent=BSGatlas-gene-781;comment="Based on: BSGatlas" basu168 BSGatlas CDS 680907 681065 . - 0 ID=BSGatlas-gene-781_transcribed;color=#3474B3;Name=ydzJ;Parent=BSGatlas-transcript-716;comment="hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzJ";derives_from=BSGatlas-gene-781 basu168 BSGatlas transcript 681143 683390 . - . ID=BSGatlas-transcript-719;color=#B37924;Parent=BSGatlas-gene-784,BSGatlas-gene-783,BSGatlas-gene-782;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 681143 683364 . - . ID=BSGatlas-transcript-718;color=#B37924;Parent=BSGatlas-gene-784,BSGatlas-gene-783,BSGatlas-gene-782;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 681143 681508 . - . ID=BSGatlas-transcript-717;color=#B37924;Parent=BSGatlas-gene-782;comment="Based on: BSGatlas" basu168 BSGatlas UTR 681143 681254 . - . ID=BSGatlas-3'UTR-252;Parent=BSGatlas-transcript-717,BSGatlas-transcript-718,BSGatlas-transcript-719;comment="3'UTR" basu168 BSGatlas gene 681255 681464 . - . ID=BSGatlas-gene-782;color=#3474B3;Name=ydjO;locus_tag=BSU_06270,BSU06270 basu168 BSGatlas CDS 681255 681464 . - 0 ID=BSGatlas-gene-782_transcribed;color=#3474B3;Name=ydjO;Parent=BSGatlas-transcript-717,BSGatlas-transcript-718,BSGatlas-transcript-719;comment="conserved hypothetical protein";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 4.3.5 Cold stress proteins,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="ydjO";derives_from=BSGatlas-gene-782 basu168 BSGatlas UTR 681465 681546 . - . ID=BSGatlas-internal_UTR-210;Parent=BSGatlas-transcript-718,BSGatlas-transcript-719;comment="internal_UTR" basu168 BSGatlas UTR 681465 681508 . - . ID=BSGatlas-5'UTR-424;Parent=BSGatlas-transcript-717;comment="5'UTR" basu168 BSGatlas gene 681547 682362 . - . ID=BSGatlas-gene-783;color=#3474B3;Name=ydjP;locus_tag=BSU_06280,BSU06280 basu168 BSGatlas CDS 681547 682362 . - 0 ID=BSGatlas-gene-783_transcribed;color=#3474B3;Name=ydjP;Parent=BSGatlas-transcript-718,BSGatlas-transcript-719;comment="putative aminoacrylate hydrolase";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="ydjP";derives_from=BSGatlas-gene-783 basu168 BSGatlas gene 682375 683364 . - . ID=BSGatlas-gene-784;color=#3474B3;Name=yeaA;locus_tag=BSU_06290,BSU06290 basu168 BSGatlas CDS 682375 683364 . - 0 ID=BSGatlas-gene-784_transcribed;color=#3474B3;Name=yeaA;Parent=BSGatlas-transcript-718,BSGatlas-transcript-719;comment="conserved hypothetical protein";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y)";synonyms="ydjQ,yeaA";derives_from=BSGatlas-gene-784 basu168 BSGatlas UTR 683365 683390 . - . ID=BSGatlas-5'UTR-425;Parent=BSGatlas-transcript-719;comment="5'UTR" basu168 BSGatlas transcript 683419 685038 . - . ID=BSGatlas-transcript-720;color=#B37924;Parent=BSGatlas-gene-785;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 683419 683461 . - . ID=BSGatlas-3'UTR-253;Parent=BSGatlas-transcript-720;comment="3'UTR" basu168 BSGatlas gene 683462 685003 . - . ID=BSGatlas-gene-785;color=#3474B3;Name=cotA;locus_tag=BSU_06300,BSU06300 basu168 BSGatlas CDS 683462 685003 . - 0 ID=BSGatlas-gene-785_transcribed;color=#3474B3;Name=cotA;Parent=BSGatlas-transcript-720;comment="outer spore coat copper-dependent promiscuouslaccase";ec="1.3.3.5,EC-1.3.3.5";go="GO:0005507 copper ion binding,GO:0016491 oxidoreductase activity,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0052716 hydroquinone:oxygen oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.5 Class V,SW 6 Groups of genes,SW 6.11 Efp-dependent proteins";synonyms="cotA,pig";derives_from=BSGatlas-gene-785 basu168 BSGatlas UTR 685004 685038 . - . ID=BSGatlas-5'UTR-426;Parent=BSGatlas-transcript-720;comment="5'UTR" basu168 BSGatlas transcript 685105 686608 . - . ID=BSGatlas-transcript-722;color=#B37924;Parent=BSGatlas-gene-786;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 685105 686596 . - . ID=BSGatlas-transcript-721;color=#B37924;Parent=BSGatlas-gene-786;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 685105 685154 . - . ID=BSGatlas-3'UTR-254;Parent=BSGatlas-transcript-721,BSGatlas-transcript-722;comment="3'UTR" basu168 BSGatlas gene 685155 686564 . - . ID=BSGatlas-gene-786;color=#3474B3;Name=gabP;locus_tag=BSU_06310,BSU06310 basu168 BSGatlas CDS 685155 686564 . - 0 ID=BSGatlas-gene-786_transcribed;color=#3474B3;Name=gabP;Parent=BSGatlas-transcript-721,BSGatlas-transcript-722;comment="gamma-aminobutyrate (GABA) permease; prolinepermease";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0009450 gamma-aminobutyric acid catabolic process,GO:0015171 amino acid transmembrane transporter activity,GO:0015185 gamma-aminobutyric acid transmembrane transporter activity,GO:0015193 L-proline transmembrane transporter activity,GO:0015812 gamma-aminobutyric acid transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0035524 proline transmembrane transport,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 1.2.4.4 Transporter for organic acids,SW 2 Metabolism,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.2 Utilization of amino acids,SW 2.3.2.10 Utilization of gamma-amino butyric acid,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="gabP,nrg-21";derives_from=BSGatlas-gene-786 basu168 BSGatlas UTR 686565 686608 . - . ID=BSGatlas-5'UTR-428;Parent=BSGatlas-transcript-722;comment="5'UTR" basu168 BSGatlas UTR 686565 686596 . - . ID=BSGatlas-5'UTR-427;Parent=BSGatlas-transcript-721;comment="5'UTR" basu168 BSGatlas gene 686602 686889 . - . ID=BSGatlas-gene-787;color=#3474B3;Name=ydzX;locus_tag=BSU_06319,BSU06319 basu168 BSGatlas CDS 686602 686889 . - 0 ID=BSGatlas-gene-787_transcribed;color=#3474B3;Name=ydzX;comment="hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="ydzX";derives_from=BSGatlas-gene-787 basu168 BSGatlas transcript 686919 687834 . + . ID=BSGatlas-transcript-723;color=#FF9900;Parent=BSGatlas-gene-788;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas UTR 686919 686961 . + . ID=BSGatlas-5'UTR-429;Parent=BSGatlas-transcript-723;comment="5'UTR" basu168 BSGatlas gene 686962 687834 . + . ID=BSGatlas-gene-788;color=#1E90FF;Name=mneS;locus_tag=BSU_06320,BSU06320 basu168 BSGatlas CDS 686962 687834 . + 0 ID=BSGatlas-gene-788_transcribed;color=#1E90FF;Name=mneS;Parent=BSGatlas-transcript-723;comment="secondary Mn(II) exporter, promiscuous";go="GO:0005384 manganese ion transmembrane transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006812 cation transport,GO:0008324 cation transmembrane transporter activity,GO:0010042 response to manganese ion,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034220 ion transmembrane transport,GO:0071421 manganese ion transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.11 Other exporters,SW 1.2.4.13 Metal ion exporters,SW 1.3 Homeostasis,SW 1.3.2 Trace metal homeostasis (Cu, Zn, Ni, Mn, Mo),SW 1.3.2.2 Manganese,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="mneS,undefined,ydxT,yeaB";derives_from=BSGatlas-gene-788 basu168 BSGatlas transcript 688138 689146 . + . ID=BSGatlas-transcript-724;color=#FF9900;Parent=BSGatlas-gene-789;comment="Based on: BSGatlas" basu168 BSGatlas UTR 688138 688183 . + . ID=BSGatlas-5'UTR-430;Parent=BSGatlas-transcript-724;comment="5'UTR" basu168 BSGatlas gene 688184 689146 . + . ID=BSGatlas-gene-789;color=#1E90FF;Name=yeaC;locus_tag=BSU_06330,BSU06330 basu168 BSGatlas CDS 688184 689146 . + 0 ID=BSGatlas-gene-789_transcribed;color=#1E90FF;Name=yeaC;Parent=BSGatlas-transcript-724;comment="putative MoxR-like ATPase";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0016887 ATPase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yeaC";derives_from=BSGatlas-gene-789 basu168 BSGatlas gene 689146 690342 . + . ID=BSGatlas-gene-790;color=#1E90FF;Name=yeaD;locus_tag=BSU_06340,BSU06340 basu168 BSGatlas CDS 689146 690342 . + 0 ID=BSGatlas-gene-790_transcribed;color=#1E90FF;Name=yeaD;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.7 Proteins of unknown function";synonyms="yeaD";derives_from=BSGatlas-gene-790 basu168 BSGatlas gene 690364 692577 . + . ID=BSGatlas-gene-791;color=#1E90FF;Name=yebA;locus_tag=BSU_06350,BSU06350 basu168 BSGatlas CDS 690364 692577 . + 0 ID=BSGatlas-gene-791_transcribed;color=#1E90FF;Name=yebA;comment="conserved hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yebA";derives_from=BSGatlas-gene-791 basu168 BSGatlas transcript 692609 694345 . + . ID=BSGatlas-transcript-727;color=#FF9900;Parent=BSGatlas-gene-793;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 692609 694281 . + . ID=BSGatlas-transcript-726;color=#FF9900;Parent=BSGatlas-gene-793;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 692609 692739 . + . ID=BSGatlas-5'UTR-431;Parent=BSGatlas-transcript-726,BSGatlas-transcript-727;comment="5'UTR" basu168 BSGatlas gene 692609 692701 . + . ID=BSGatlas-gene-792;color=#999999;Name=TERMseq-predicted-riboswitch basu168 BSGatlas transcript 692609 692701 . + . ID=BSGatlas-transcript-725;color=#FF9900;Parent=BSGatlas-gene-792;comment="Based on: BSGatlas" basu168 BSGatlas riboswitch 692609 692701 . + . ID=BSGatlas-gene-792_transcribed;color=#999999;Name=TERMseq-predicted-riboswitch;Parent=BSGatlas-transcript-725;derives_from=BSGatlas-gene-792 basu168 BSGatlas gene 692740 694281 . + . ID=BSGatlas-gene-793;color=#1E90FF;Name=guaA;locus_tag=BSU_06360,BSU06360 basu168 BSGatlas CDS 692740 694281 . + 0 ID=BSGatlas-gene-793_transcribed;color=#1E90FF;Name=guaA;Parent=BSGatlas-transcript-726,BSGatlas-transcript-727;comment="GMP synthetase";ec="6.3.5.2,EC-6.3.5.2";go="GO:0000166 nucleotide binding,GO:0003922 GMP synthase (glutamine-hydrolyzing) activity,GO:0005524 ATP binding,GO:0006164 purine nucleotide biosynthetic process,GO:0006177 GMP biosynthetic process,GO:0006541 glutamine metabolic process,GO:0016462 pyrophosphatase activity,GO:0016874 ligase activity";kegg_pathways="Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="guaA,guaB";derives_from=BSGatlas-gene-793 basu168 BSGatlas UTR 694282 694345 . + . ID=BSGatlas-3'UTR-255;Parent=BSGatlas-transcript-727;comment="3'UTR" basu168 BSGatlas transcript 694418 696016 . + . ID=BSGatlas-transcript-728;color=#FF9900;Parent=BSGatlas-gene-795;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 694418 694661 . + . ID=BSGatlas-5'UTR-432;Parent=BSGatlas-transcript-728;comment="5'UTR" basu168 BSGatlas transcript 694424 694575 . + . ID=BSGatlas-transcript-729;color=#FF9900;Parent=BSGatlas-gene-794;comment="Based on: BSGatlas" basu168 BSGatlas gene 694424 694527 . + . ID=BSGatlas-gene-794;color=#999999;Name=Purine_gswC;locus_tag=BSU_misc_RNA_9,BSU_MISC_RNA_9 basu168 BSGatlas riboswitch 694424 694527 . + . ID=BSGatlas-gene-794_transcribed;color=#999999;Name=Purine_gswC;Parent=BSGatlas-transcript-729;comment="guanine riboswitch";synonyms="BSU_misc_RNA_9";derives_from=BSGatlas-gene-794 basu168 BSGatlas UTR 694528 694575 . + . ID=BSGatlas-3'UTR-256;Parent=BSGatlas-transcript-729;comment="3'UTR" basu168 BSGatlas gene 694662 695984 . + . ID=BSGatlas-gene-795;color=#1E90FF;Name=pbuG;locus_tag=BSU_06370,BSU06370 basu168 BSGatlas CDS 694662 695984 . + 0 ID=BSGatlas-gene-795_transcribed;color=#1E90FF;Name=pbuG;Parent=BSGatlas-transcript-728;comment="hypoxanthine/guanine permease";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.6 Nucleotide/ nucleoside transporter,SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="pbuG,yebB";derives_from=BSGatlas-gene-795 basu168 BSGatlas UTR 695985 696016 . + . ID=BSGatlas-3'UTR-257;Parent=BSGatlas-transcript-728;comment="3'UTR" basu168 BSGatlas transcript 696054 696998 . + . ID=BSGatlas-transcript-730;color=#FF9900;Parent=BSGatlas-gene-796;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 696054 696194 . + . ID=BSGatlas-5'UTR-433;Parent=BSGatlas-transcript-730;comment="5'UTR" basu168 BSGatlas gene 696195 696998 . + . ID=BSGatlas-gene-796;color=#1E90FF;Name=yebC;locus_tag=BSU_06380,BSU06380 basu168 BSGatlas CDS 696195 696998 . + 0 ID=BSGatlas-gene-796_transcribed;color=#1E90FF;Name=yebC;Parent=BSGatlas-transcript-730;comment="putative integral inner membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yebC";derives_from=BSGatlas-gene-796 basu168 BSGatlas transcript 697093 697353 . + . ID=BSGatlas-transcript-731;color=#FF9900;Parent=BSGatlas-gene-797;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 697093 697156 . + . ID=BSGatlas-5'UTR-434;Parent=BSGatlas-transcript-731;comment="5'UTR" basu168 BSGatlas gene 697157 697324 . + . ID=BSGatlas-gene-797;color=#1E90FF;Name=yebD;locus_tag=BSU_06390,BSU06390 basu168 BSGatlas CDS 697157 697324 . + 0 ID=BSGatlas-gene-797_transcribed;color=#1E90FF;Name=yebD;Parent=BSGatlas-transcript-731;comment="hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yebD";derives_from=BSGatlas-gene-797 basu168 BSGatlas UTR 697325 697353 . + . ID=BSGatlas-3'UTR-258;Parent=BSGatlas-transcript-731;comment="3'UTR" basu168 BSGatlas transcript 697399 698289 . + . ID=BSGatlas-transcript-732;color=#FF9900;Parent=BSGatlas-gene-798,BSGatlas-gene-799;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 697399 697537 . + . ID=BSGatlas-5'UTR-435;Parent=BSGatlas-transcript-732;comment="5'UTR" basu168 BSGatlas transcript 697487 698289 . + . ID=BSGatlas-transcript-733;color=#FF9900;Parent=BSGatlas-gene-798,BSGatlas-gene-799;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 697487 697537 . + . ID=BSGatlas-5'UTR-436;Parent=BSGatlas-transcript-733;comment="5'UTR" basu168 BSGatlas gene 697538 698092 . + . ID=BSGatlas-gene-798;color=#1E90FF;Name=yebE;locus_tag=BSU_06400,BSU06400 basu168 BSGatlas CDS 697538 698092 . + 0 ID=BSGatlas-gene-798_transcribed;color=#1E90FF;Name=yebE;Parent=BSGatlas-transcript-732,BSGatlas-transcript-733;comment="conserved hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yebE,yebF";derives_from=BSGatlas-gene-798 basu168 BSGatlas gene 698092 698289 . + . ID=BSGatlas-gene-799;color=#1E90FF;Name=yebG;locus_tag=BSU_06410,BSU06410 basu168 BSGatlas CDS 698092 698289 . + 0 ID=BSGatlas-gene-799_transcribed;color=#1E90FF;Name=yebG;Parent=BSGatlas-transcript-732,BSGatlas-transcript-733;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yebG";derives_from=BSGatlas-gene-799 basu168 BSGatlas transcript 698368 698581 . + . ID=BSGatlas-transcript-734;color=#FF9900;Parent=BSGatlas-gene-800;comment="Based on: BSGatlas" basu168 BSGatlas gene 698368 698471 . + . ID=BSGatlas-gene-800;color=#999999;Name=Purine_gswD;locus_tag=BSU_misc_RNA_10,BSU_MISC_RNA_10 basu168 BSGatlas riboswitch 698368 698471 . + . ID=BSGatlas-gene-800_transcribed;color=#999999;Name=Purine_gswD;Parent=BSGatlas-transcript-734;comment="guanine riboswitch";synonyms="BSU_misc_RNA_10";derives_from=BSGatlas-gene-800 basu168 BSGatlas transcript 698370 711460 . + . ID=BSGatlas-transcript-736;color=#FF9900;Parent=BSGatlas-gene-802,BSGatlas-gene-803,BSGatlas-gene-804,BSGatlas-gene-805,BSGatlas-gene-806,BSGatlas-gene-807,BSGatlas-gene-808,BSGatlas-gene-809,BSGatlas-gene-810,BSGatlas-gene-811,BSGatlas-gene-812,BSGatlas-gene-813;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 698370 706926 . + . ID=BSGatlas-transcript-735;color=#FF9900;Parent=BSGatlas-gene-802,BSGatlas-gene-803,BSGatlas-gene-804,BSGatlas-gene-805,BSGatlas-gene-806,BSGatlas-gene-807,BSGatlas-gene-808,BSGatlas-gene-809;comment="Based on: BSGatlas" basu168 BSGatlas UTR 698370 698611 . + . ID=BSGatlas-5'UTR-437;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="5'UTR" basu168 BSGatlas gene 698372 698571 . + . ID=BSGatlas-gene-801;color=#999999;Name=Purine basu168 BSGatlas transcript 698372 698571 . + . ID=BSGatlas-transcript-737;color=#FF9900;Parent=BSGatlas-gene-801;comment="Based on: BSGatlas" basu168 BSGatlas riboswitch 698372 698571 . + . ID=BSGatlas-gene-801_transcribed;color=#999999;Name=Purine;Parent=BSGatlas-transcript-737;derives_from=BSGatlas-gene-801 basu168 BSGatlas UTR 698472 698581 . + . ID=BSGatlas-3'UTR-259;Parent=BSGatlas-transcript-734;comment="3'UTR" basu168 BSGatlas gene 698612 699100 . + . ID=BSGatlas-gene-802;color=#1E90FF;Name=purE;locus_tag=BSU_06420,BSU06420 basu168 BSGatlas CDS 698612 699100 . + 0 ID=BSGatlas-gene-802_transcribed;color=#1E90FF;Name=purE;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="N5-carboxyaminoimidazole ribonucleotide mutase";ec="4.1.1.21,5.4.99.18,EC-4.1.1.21";go="GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0016853 isomerase activity,GO:0034023 5-(carboxyamino)imidazole ribonucleotide mutase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purE";derives_from=BSGatlas-gene-802 basu168 BSGatlas gene 699093 700235 . + . ID=BSGatlas-gene-803;color=#1E90FF;Name=purK;locus_tag=BSU_06430,BSU06430 basu168 BSGatlas CDS 699093 700235 . + 0 ID=BSGatlas-gene-803_transcribed;color=#1E90FF;Name=purK;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="N5-carboxyaminoimidazole ribonucleotidesynthase";ec="4.1.1.21,6.3.4.18,EC-4.1.1.21";go="GO:0000166 nucleotide binding,GO:0003824 catalytic activity,GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity,GO:0004638 phosphoribosylaminoimidazole carboxylase activity,GO:0005524 ATP binding,GO:0006098 pentose-phosphate shunt,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0016874 ligase activity,GO:0034028 5-(carboxyamino)imidazole ribonucleotide synthase activity,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purK";derives_from=BSGatlas-gene-803 basu168 BSGatlas gene 700232 701527 . + . ID=BSGatlas-gene-804;color=#1E90FF;Name=purB;locus_tag=BSU_06440,BSU06440 basu168 BSGatlas CDS 700232 701527 . + 0 ID=BSGatlas-gene-804_transcribed;color=#1E90FF;Name=purB;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="adenylosuccinate lyase";ec="4.3.2.2,EC-4.3.2.2";go="GO:0003824 catalytic activity,GO:0004018 N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity,GO:0006164 purine nucleotide biosynthetic process,GO:0006167 AMP biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0009152 purine ribonucleotide biosynthetic process,GO:0016829 lyase activity,GO:0044208 'de novo' AMP biosynthetic process,GO:0070626 (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides,SW 3 Information processing,SW 3.1 Genetics,SW 3.1.9 Newly identified competence genes";synonyms="purB";derives_from=BSGatlas-gene-804 basu168 BSGatlas UTR 701528 701600 . + . ID=BSGatlas-internal_UTR-211;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="internal_UTR" basu168 BSGatlas gene 701601 702326 . + . ID=BSGatlas-gene-805;color=#1E90FF;Name=purC;locus_tag=BSU_06450,BSU06450 basu168 BSGatlas CDS 701601 702326 . + 0 ID=BSGatlas-gene-805_transcribed;color=#1E90FF;Name=purC;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="phosphoribosylaminoimidazole succinocarboxamidesynthetase";ec="6.3.2.6,EC-6.3.2.6";go="GO:0000166 nucleotide binding,GO:0004639 phosphoribosylaminoimidazolesuccinocarboxamide synthase activity,GO:0005524 ATP binding,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0016874 ligase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purC";derives_from=BSGatlas-gene-805 basu168 BSGatlas gene 702319 702573 . + . ID=BSGatlas-gene-806;color=#1E90FF;Name=purS;locus_tag=BSU_06460,BSU06460 basu168 BSGatlas CDS 702319 702573 . + 0 ID=BSGatlas-gene-806_transcribed;color=#1E90FF;Name=purS;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="factor required forphosphoribosylformylglycinamidine synthetase activity";ec="6.3.5.3";go="GO:0008152 metabolic process,GO:0016879 ligase activity, forming carbon-nitrogen bonds";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purS,yexA";derives_from=BSGatlas-gene-806 basu168 BSGatlas gene 702570 703253 . + . ID=BSGatlas-gene-807;color=#1E90FF;Name=purQ;locus_tag=BSU_06470,BSU06470 basu168 BSGatlas CDS 702570 703253 . + 0 ID=BSGatlas-gene-807_transcribed;color=#1E90FF;Name=purQ;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="phosphoribosylformylglycinamidine synthetasesubunit I";ec="6.3.5.3,EC-6.3.5.3";go="GO:0000166 nucleotide binding,GO:0004642 phosphoribosylformylglycinamidine synthase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0006541 glutamine metabolic process,GO:0016874 ligase activity";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Arginine biosynthesis (ko00220),Biosynthesis of secondary metabolites (ko01110),D-Glutamine and D-glutamate metabolism (ko00471),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purQ";derives_from=BSGatlas-gene-807 basu168 BSGatlas gene 703237 705465 . + . ID=BSGatlas-gene-808;color=#1E90FF;Name=purL;locus_tag=BSU_06480,BSU06480 basu168 BSGatlas CDS 703237 705465 . + 0 ID=BSGatlas-gene-808_transcribed;color=#1E90FF;Name=purL;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="phosphoribosylformylglycinamidine synthetasesubunit II";ec="6.3.5.3,EC-6.3.5.3";go="GO:0000166 nucleotide binding,GO:0003824 catalytic activity,GO:0004642 phosphoribosylformylglycinamidine synthase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0016874 ligase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="purL";derives_from=BSGatlas-gene-808 basu168 BSGatlas gene 705441 706871 . + . ID=BSGatlas-gene-809;color=#1E90FF;Name=purF;locus_tag=BSU_06490,BSU06490 basu168 BSGatlas CDS 705441 706871 . + 0 ID=BSGatlas-gene-809_transcribed;color=#1E90FF;Name=purF;Parent=BSGatlas-transcript-735,BSGatlas-transcript-736;comment="glutamine phosphoribosylpyrophosphateamidotransferase";ec="2.4.2.14,EC-2.4.2.14";go="GO:0003824 catalytic activity,GO:0004044 amidophosphoribosyltransferase activity,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0006541 glutamine metabolic process,GO:0008152 metabolic process,GO:0009113 purine nucleobase biosynthetic process,GO:0009116 nucleoside metabolic process,GO:0016740 transferase activity,GO:0016757 transferase activity, transferring glycosyl groups,GO:0046872 metal ion binding,GO:0051536 iron-sulfur cluster binding,GO:0051539 4 iron, 4 sulfur cluster binding";kegg_pathways="Alanine aspartate and glutamate metabolism (ko00250),Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purB,purF";derives_from=BSGatlas-gene-809 basu168 BSGatlas UTR 706872 706972 . + . ID=BSGatlas-internal_UTR-212;Parent=BSGatlas-transcript-736;comment="internal_UTR" basu168 BSGatlas UTR 706872 706926 . + . ID=BSGatlas-3'UTR-260;Parent=BSGatlas-transcript-735;comment="3'UTR" basu168 BSGatlas gene 706973 708013 . + . ID=BSGatlas-gene-810;color=#1E90FF;Name=purM;locus_tag=BSU_06500,BSU06500 basu168 BSGatlas CDS 706973 708013 . + 0 ID=BSGatlas-gene-810_transcribed;color=#1E90FF;Name=purM;Parent=BSGatlas-transcript-736;comment="phosphoribosylaminoimidazole synthetase";ec="6.3.3.1,EC-6.3.3.1";go="GO:0000166 nucleotide binding,GO:0003824 catalytic activity,GO:0004641 phosphoribosylformylglycinamidine cyclo-ligase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0016874 ligase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purM";derives_from=BSGatlas-gene-810 basu168 BSGatlas transcript 708010 711460 . + . ID=BSGatlas-transcript-738;color=#FF9900;Parent=BSGatlas-gene-811,BSGatlas-gene-812,BSGatlas-gene-813;comment="Based on: BSGatlas" basu168 BSGatlas gene 708010 708597 . + . ID=BSGatlas-gene-811;color=#1E90FF;Name=purN;locus_tag=BSU_06510,BSU06510 basu168 BSGatlas CDS 708010 708597 . + 0 ID=BSGatlas-gene-811_transcribed;color=#1E90FF;Name=purN;Parent=BSGatlas-transcript-736,BSGatlas-transcript-738;comment="phosphoribosylglycinamide formyltransferase";ec="2.1.2.2,EC-2.1.2.2";go="GO:0004644 phosphoribosylglycinamide formyltransferase activity,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0008168 methyltransferase activity,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0016742 hydroxymethyl-, formyl- and related transferase activity,GO:0032259 methylation";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),One carbon pool by folate (ko00670),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purN";derives_from=BSGatlas-gene-811 basu168 BSGatlas gene 708594 710132 . + . ID=BSGatlas-gene-812;color=#1E90FF;Name=purH;locus_tag=BSU_06520,BSU06520 basu168 BSGatlas CDS 708594 710132 . + 0 ID=BSGatlas-gene-812_transcribed;color=#1E90FF;Name=purH;Parent=BSGatlas-transcript-736,BSGatlas-transcript-738;comment="fused phosphoribosylaminoimidazole carboxyformyl formyltransferase; inosine-monophosphatecyclohydrolase";ec="2.1.2.3,2.1.2.3;3.5.4.10,EC-3.5.4.10;EC-2.1.2.3";go="GO:0003824 catalytic activity,GO:0003937 IMP cyclohydrolase activity,GO:0004643 phosphoribosylaminoimidazolecarboxamide formyltransferase activity,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016787 hydrolase activity";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),One carbon pool by folate (ko00670),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purH,purJ";derives_from=BSGatlas-gene-812 basu168 BSGatlas gene 710148 711416 . + . ID=BSGatlas-gene-813;color=#1E90FF;Name=purD;locus_tag=BSU_06530,BSU06530 basu168 BSGatlas CDS 710148 711416 . + 0 ID=BSGatlas-gene-813_transcribed;color=#1E90FF;Name=purD;Parent=BSGatlas-transcript-736,BSGatlas-transcript-738;comment="phosphoribosylglycinamide synthetase";ec="6.3.4.13,EC-6.3.4.13";go="GO:0000166 nucleotide binding,GO:0000287 magnesium ion binding,GO:0003824 catalytic activity,GO:0004637 phosphoribosylamine-glycine ligase activity,GO:0005524 ATP binding,GO:0006164 purine nucleotide biosynthetic process,GO:0006189 'de novo' IMP biosynthetic process,GO:0009113 purine nucleobase biosynthetic process,GO:0016874 ligase activity,GO:0030145 manganese ion binding,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.2 Biosynthesis/ acquisition of nucleotides,SW 2.5.2.1 Biosynthesis/ acquisition of purine nucleotides";synonyms="purD";derives_from=BSGatlas-gene-813 basu168 BSGatlas UTR 711417 711460 . + . ID=BSGatlas-3'UTR-261;Parent=BSGatlas-transcript-736,BSGatlas-transcript-738;comment="3'UTR" basu168 BSGatlas transcript 711456 711954 . - . ID=BSGatlas-transcript-739;color=#B37924;Parent=BSGatlas-gene-814;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 711456 711875 . - . ID=BSGatlas-gene-814;color=#3474B3;Name=yezC;locus_tag=BSU_06540,BSU06540 basu168 BSGatlas CDS 711456 711875 . - 0 ID=BSGatlas-gene-814_transcribed;color=#3474B3;Name=yezC;Parent=BSGatlas-transcript-739;comment="putative transcriptional regulator (Lrp/AsnCfamily)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yezC";derives_from=BSGatlas-gene-814 basu168 BSGatlas UTR 711876 711954 . - . ID=BSGatlas-5'UTR-438;Parent=BSGatlas-transcript-739;comment="5'UTR" basu168 BSGatlas transcript 712019 714009 . + . ID=BSGatlas-transcript-741;color=#FF9900;Parent=BSGatlas-gene-815;comment="Based on: BsubCyc" basu168 BSGatlas gene 712019 713293 . + . ID=BSGatlas-gene-815;color=#1E90FF;Name=yecA;locus_tag=BSU_06550,BSU06550 basu168 BSGatlas transcript 712019 713293 . + . ID=BSGatlas-transcript-740;color=#FF9900;Parent=BSGatlas-gene-815;comment="Based on: BsubCyc" basu168 BSGatlas CDS 712019 713293 . + 0 ID=BSGatlas-gene-815_transcribed;color=#1E90FF;Name=yecA;Parent=BSGatlas-transcript-740,BSGatlas-transcript-741;comment="putative amino acid exporter";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006865 amino acid transport,GO:0015171 amino acid transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 1.2.4.12 Other transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yecA";derives_from=BSGatlas-gene-815 basu168 BSGatlas UTR 713294 714009 . + . ID=BSGatlas-3'UTR-262;Parent=BSGatlas-transcript-741;comment="3'UTR" basu168 BSGatlas transcript 713308 713956 . - . ID=BSGatlas-transcript-742;color=#B37924;Parent=BSGatlas-gene-816;comment="Based on: BsubCyc" basu168 BSGatlas gene 713308 713535 . - . ID=BSGatlas-gene-816;color=#3474B3;Name=yezF;locus_tag=BSU_06559,BSU06559 basu168 BSGatlas CDS 713308 713535 . - 0 ID=BSGatlas-gene-816_transcribed;color=#3474B3;Name=yezF;Parent=BSGatlas-transcript-742;comment="hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling),SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yezF";derives_from=BSGatlas-gene-816 basu168 BSGatlas UTR 713536 713956 . - . ID=BSGatlas-5'UTR-439;Parent=BSGatlas-transcript-742;comment="5'UTR" basu168 BSGatlas transcript 713619 716775 . + . ID=BSGatlas-transcript-744;color=#FF9900;Parent=BSGatlas-gene-817,BSGatlas-gene-818,BSGatlas-gene-819;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 713619 716630 . + . ID=BSGatlas-transcript-743;color=#FF9900;Parent=BSGatlas-gene-817,BSGatlas-gene-818;comment="Based on: BSGatlas" basu168 BSGatlas UTR 713619 713663 . + . ID=BSGatlas-5'UTR-440;Parent=BSGatlas-transcript-743,BSGatlas-transcript-744;comment="5'UTR" basu168 BSGatlas gene 713664 715406 . + . ID=BSGatlas-gene-817;color=#1E90FF;Name=yerA;locus_tag=BSU_06560,BSU06560 basu168 BSGatlas CDS 713664 715406 . + 0 ID=BSGatlas-gene-817_transcribed;color=#1E90FF;Name=yerA;Parent=BSGatlas-transcript-743,BSGatlas-transcript-744;comment="putative adenine deaminase YerA";ec="3.5.4.2";go="GO:0000034 adenine deaminase activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds";kegg_pathways="Metabolic pathways (ko01100),Purine metabolism (ko00230)";subtiwiki_category="SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yerA";derives_from=BSGatlas-gene-817 basu168 BSGatlas transcript 715398 716775 . + . ID=BSGatlas-transcript-746;color=#FF9900;Parent=BSGatlas-gene-818,BSGatlas-gene-819;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 715398 716630 . + . ID=BSGatlas-transcript-745;color=#FF9900;Parent=BSGatlas-gene-818;comment="Based on: BSGatlas" basu168 BSGatlas UTR 715398 715432 . + . ID=BSGatlas-5'UTR-441;Parent=BSGatlas-transcript-745,BSGatlas-transcript-746;comment="5'UTR" basu168 BSGatlas UTR 715407 715432 . + . ID=BSGatlas-internal_UTR-213;Parent=BSGatlas-transcript-743,BSGatlas-transcript-744;comment="internal_UTR" basu168 BSGatlas gene 715433 716428 . + . ID=BSGatlas-gene-818;color=#1E90FF;Name=yerB;locus_tag=BSU_06570,BSU06570 basu168 BSGatlas CDS 715433 716428 . + 0 ID=BSGatlas-gene-818_transcribed;color=#1E90FF;Name=yerB;Parent=BSGatlas-transcript-743,BSGatlas-transcript-744,BSGatlas-transcript-745,BSGatlas-transcript-746;comment="putative lipoprotein";go="GO:0005886 plasma membrane,GO:0016020 membrane";subtiwiki_category="SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.2 Additional genes,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.8 Phosphorylation on either a Ser, Thr or Tyr residue";synonyms="yerB";derives_from=BSGatlas-gene-818 basu168 BSGatlas UTR 716429 716630 . + . ID=BSGatlas-3'UTR-263;Parent=BSGatlas-transcript-743,BSGatlas-transcript-745;comment="3'UTR" basu168 BSGatlas gene 716431 716745 . + . ID=BSGatlas-gene-819;color=#1E90FF;Name=yerC;locus_tag=BSU_06580,BSU06580 basu168 BSGatlas CDS 716431 716745 . + 0 ID=BSGatlas-gene-819_transcribed;color=#1E90FF;Name=yerC;Parent=BSGatlas-transcript-744,BSGatlas-transcript-746;comment="transcriptional repressor-histidine operons";go="GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006355 regulation of transcription, DNA-templated,GO:0034301 endospore formation,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yerC";derives_from=BSGatlas-gene-819 basu168 BSGatlas UTR 716746 716775 . + . ID=BSGatlas-3'UTR-264;Parent=BSGatlas-transcript-744,BSGatlas-transcript-746;comment="3'UTR" basu168 BSGatlas transcript 716780 718390 . - . ID=BSGatlas-transcript-747;color=#B37924;Parent=BSGatlas-gene-820;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 716780 718357 . - . ID=BSGatlas-gene-820;color=#3474B3;Name=yerD;locus_tag=BSU_06590,BSU06590 basu168 BSGatlas CDS 716780 718357 . - 0 ID=BSGatlas-gene-820_transcribed;color=#3474B3;Name=yerD;Parent=BSGatlas-transcript-747;comment="putative osmotic shock glutamate synthasesubunit (flavoprotein subunit, ferredoxin-dependent)";ec="1.4.1.13";go="GO:0000303 response to superoxide,GO:0003824 catalytic activity,GO:0005886 plasma membrane,GO:0006537 glutamate biosynthetic process,GO:0015930 glutamate synthase activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yerD";derives_from=BSGatlas-gene-820 basu168 BSGatlas UTR 718358 718390 . - . ID=BSGatlas-5'UTR-442;Parent=BSGatlas-transcript-747;comment="5'UTR" basu168 BSGatlas transcript 718571 724872 . + . ID=BSGatlas-transcript-748;color=#FF9900;Parent=BSGatlas-gene-821,BSGatlas-gene-822,BSGatlas-gene-823,BSGatlas-gene-824;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 718571 718621 . + . ID=BSGatlas-5'UTR-443;Parent=BSGatlas-transcript-748;comment="5'UTR" basu168 BSGatlas gene 718622 719308 . + . ID=BSGatlas-gene-821;color=#1E90FF;Name=pcrB;locus_tag=BSU_06600,BSU06600 basu168 BSGatlas CDS 718622 719308 . + 0 ID=BSGatlas-gene-821_transcribed;color=#1E90FF;Name=pcrB;Parent=BSGatlas-transcript-748;comment="heptaprenylglyceryl-phosphate synthase";ec="EC-2.5.1.41";go="GO:0000287 magnesium ion binding,GO:0002094 polyprenyltransferase activity,GO:0006629 lipid metabolic process,GO:0006650 glycerophospholipid metabolic process,GO:0008654 phospholipid biosynthetic process,GO:0016740 transferase activity,GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups,GO:0046474 glycerophospholipid biosynthetic process,GO:0046872 metal ion binding";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.3 Lipid metabolism/ other";synonyms="pcrB,yerE";derives_from=BSGatlas-gene-821 basu168 BSGatlas UTR 719309 719369 . + . ID=BSGatlas-internal_UTR-214;Parent=BSGatlas-transcript-748;comment="internal_UTR" basu168 BSGatlas gene 719370 721589 . + . ID=BSGatlas-gene-822;color=#1E90FF;Name=pcrA;locus_tag=BSU_06610,BSU06610 basu168 BSGatlas CDS 719370 721589 . + 0 ID=BSGatlas-gene-822_transcribed;color=#1E90FF;Name=pcrA;Parent=BSGatlas-transcript-748;comment="ATP-dependent DNA helicase";ec="3.6.4.12";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0004003 ATP-dependent DNA helicase activity,GO:0004386 helicase activity,GO:0005524 ATP binding,GO:0005737 cytoplasm,GO:0006268 DNA unwinding involved in DNA replication,GO:0006281 DNA repair,GO:0006974 cellular response to DNA damage stimulus,GO:0016787 hydrolase activity";kegg_pathways="Mismatch repair (ko03430),Nucleotide excision repair (ko03420)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.5 DNA repair/ recombination,SW 3.1.5.6 Other proteins,SW 5 Prophages and mobile genetic elements,SW 5.2 Mobile genetic elements,SW 5.2.2 Additional genes,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="pcrA,yerF";derives_from=BSGatlas-gene-822 basu168 BSGatlas UTR 721590 721612 . + . ID=BSGatlas-internal_UTR-215;Parent=BSGatlas-transcript-748;comment="internal_UTR" basu168 BSGatlas gene 721613 723619 . + . ID=BSGatlas-gene-823;color=#1E90FF;Name=ligA;locus_tag=BSU_06620,BSU06620 basu168 BSGatlas CDS 721613 723619 . + 0 ID=BSGatlas-gene-823_transcribed;color=#1E90FF;Name=ligA;Parent=BSGatlas-transcript-748;comment="DNA ligase (NAD-dependent)";ec="6.5.1.2,EC-6.5.1.6;EC-6.5.1.2";go="GO:0003677 DNA binding,GO:0003911 DNA ligase (NAD+) activity,GO:0006260 DNA replication,GO:0006266 DNA ligation,GO:0006281 DNA repair,GO:0006974 cellular response to DNA damage stimulus,GO:0016874 ligase activity,GO:0046872 metal ion binding";kegg_pathways="Base excision repair (ko03410),DNA replication (ko03030),Mismatch repair (ko03430),Nucleotide excision repair (ko03420)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.1 DNA replication,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="lig,ligA,yerG";derives_from=BSGatlas-gene-823 basu168 BSGatlas gene 723635 724825 . + . ID=BSGatlas-gene-824;color=#1E90FF;Name=yerH;locus_tag=BSU_06630,BSU06630 basu168 BSGatlas CDS 723635 724825 . + 0 ID=BSGatlas-gene-824_transcribed;color=#1E90FF;Name=yerH;Parent=BSGatlas-transcript-748;comment="putative lipoprotein";go="GO:0005886 plasma membrane,GO:0016020 membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yerH";derives_from=BSGatlas-gene-824 basu168 BSGatlas UTR 724826 724872 . + . ID=BSGatlas-3'UTR-265;Parent=BSGatlas-transcript-748;comment="3'UTR" basu168 BSGatlas transcript 724870 725997 . + . ID=BSGatlas-transcript-749;color=#FF9900;Parent=BSGatlas-gene-825;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 724870 724986 . + . ID=BSGatlas-5'UTR-444;Parent=BSGatlas-transcript-749;comment="5'UTR" basu168 BSGatlas gene 724987 725997 . + . ID=BSGatlas-gene-825;color=#1E90FF;Name=yerI;locus_tag=BSU_06640,BSU06640 basu168 BSGatlas CDS 724987 725997 . + 0 ID=BSGatlas-gene-825_transcribed;color=#1E90FF;Name=yerI;Parent=BSGatlas-transcript-749;comment="putative kinase";go="GO:0008152 metabolic process,GO:0016772 transferase activity, transferring phosphorus-containing groups";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yerI";derives_from=BSGatlas-gene-825 basu168 BSGatlas transcript 725992 726774 . - . ID=BSGatlas-transcript-751;color=#B37924;Parent=BSGatlas-gene-827;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 725992 726034 . - . ID=BSGatlas-3'UTR-267;Parent=BSGatlas-transcript-751;comment="3'UTR" basu168 BSGatlas gene 726024 726828 . + . ID=BSGatlas-gene-826;color=#CC0000;Name=S235;locus_tag=new_726024_726828 basu168 BSGatlas ncRNA 726024 726828 . + . ID=BSGatlas-gene-826_transcribed;color=#CC0000;Name=S235;synonyms="S235";derives_from=BSGatlas-gene-826 basu168 BSGatlas gene 726035 726733 . - . ID=BSGatlas-gene-827;color=#3474B3;Name=sapB;locus_tag=BSU_06650,BSU06650 basu168 BSGatlas CDS 726035 726733 . - 0 ID=BSGatlas-gene-827_transcribed;color=#3474B3;Name=sapB;Parent=BSGatlas-transcript-751;comment="putative magnesium transporter";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.3 Phosphate metabolism,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="sapB";derives_from=BSGatlas-gene-827 basu168 BSGatlas UTR 726734 726774 . - . ID=BSGatlas-5'UTR-445;Parent=BSGatlas-transcript-751;comment="5'UTR" basu168 BSGatlas transcript 726795 728444 . - . ID=BSGatlas-transcript-754;color=#B37924;Parent=BSGatlas-gene-828;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 726795 728431 . - . ID=BSGatlas-transcript-753;color=#B37924;Parent=BSGatlas-gene-828;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 726795 728318 . - . ID=BSGatlas-transcript-752;color=#B37924;Parent=BSGatlas-gene-828;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 726795 726839 . - . ID=BSGatlas-3'UTR-268;Parent=BSGatlas-transcript-752,BSGatlas-transcript-753,BSGatlas-transcript-754;comment="3'UTR" basu168 BSGatlas gene 726840 728318 . - . ID=BSGatlas-gene-828;color=#3474B3;Name=opuE;locus_tag=BSU_06660,BSU06660 basu168 BSGatlas CDS 726840 728318 . - 0 ID=BSGatlas-gene-828_transcribed;color=#3474B3;Name=opuE;Parent=BSGatlas-transcript-752,BSGatlas-transcript-753,BSGatlas-transcript-754;comment="proline transporter";go="GO:0005215 transporter activity,GO:0005298 proline:sodium symporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006814 sodium ion transport,GO:0015293 symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0031402 sodium ion binding,GO:0035524 proline transmembrane transport,GO:0035725 sodium ion transmembrane transport,GO:0055085 transmembrane transport,GO:1902475 L-alpha-amino acid transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.1 Solute:sodium symporter family,SW 1.2.4.1.7 Sodium-solute symporter,SW 1.2.4.9 Uptake of compatible solutes,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.6 Coping with hyper-osmotic stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="opuE,yerK";derives_from=BSGatlas-gene-828 basu168 BSGatlas UTR 728319 728444 . - . ID=BSGatlas-5'UTR-447;Parent=BSGatlas-transcript-754;comment="5'UTR" basu168 BSGatlas UTR 728319 728431 . - . ID=BSGatlas-5'UTR-446;Parent=BSGatlas-transcript-753;comment="5'UTR" basu168 BSGatlas transcript 728598 731939 . + . ID=BSGatlas-transcript-755;color=#FF9900;Parent=BSGatlas-gene-829,BSGatlas-gene-830,BSGatlas-gene-831;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 728598 728731 . + . ID=BSGatlas-5'UTR-448;Parent=BSGatlas-transcript-755;comment="5'UTR" basu168 BSGatlas gene 728732 729022 . + . ID=BSGatlas-gene-829;color=#1E90FF;Name=gatC;locus_tag=BSU_06670,BSU06670 basu168 BSGatlas CDS 728732 729022 . + 0 ID=BSGatlas-gene-829_transcribed;color=#1E90FF;Name=gatC;Parent=BSGatlas-transcript-755;comment="glutamyl-tRNA(Gln) amidotransferase (subunit C)";ec="6.3.5.7";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006412 translation,GO:0006450 regulation of translational fidelity,GO:0016874 ligase activity,GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970),Metabolic pathways (ko01100)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue";synonyms="gatC,yedA,yerL";derives_from=BSGatlas-gene-829 basu168 BSGatlas gene 729038 730495 . + . ID=BSGatlas-gene-830;color=#1E90FF;Name=gatA;locus_tag=BSU_06680,BSU06680 basu168 BSGatlas CDS 729038 730495 . + 0 ID=BSGatlas-gene-830_transcribed;color=#1E90FF;Name=gatA;Parent=BSGatlas-transcript-755;comment="glutamyl-tRNA(Gln) amidotransferase (subunit A)";ec="6.3.5.7";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006412 translation,GO:0016874 ligase activity,GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor,GO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970),Metabolic pathways (ko01100)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="gatA,yedB,yerM";derives_from=BSGatlas-gene-830 basu168 BSGatlas gene 730509 731939 . + . ID=BSGatlas-gene-831;color=#1E90FF;Name=gatB;locus_tag=BSU_06690,BSU06690 basu168 BSGatlas CDS 730509 731939 . + 0 ID=BSGatlas-gene-831_transcribed;color=#1E90FF;Name=gatB;Parent=BSGatlas-transcript-755;comment="glutamyl-tRNA(Gln) amidotransferase (subunit B)";ec="6.3.5.7";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006412 translation,GO:0016874 ligase activity,GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor";kegg_pathways="Aminoacyl-tRNA biosynthesis (ko00970),Metabolic pathways (ko01100)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.10 Aminoacyl-tRNA synthetases,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="gatB,yerN";derives_from=BSGatlas-gene-831 basu168 BSGatlas transcript 731954 732905 . - . ID=BSGatlas-transcript-756;color=#B37924;Parent=BSGatlas-gene-832;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 731954 732823 . - . ID=BSGatlas-gene-832;color=#3474B3;Name=yerO;locus_tag=BSU_06700,BSU06700 basu168 BSGatlas CDS 731954 732823 . - 0 ID=BSGatlas-gene-832_transcribed;color=#3474B3;Name=yerO;Parent=BSGatlas-transcript-756;comment="putative transcriptional regulator (TetR/AcrRfamily)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yerO";derives_from=BSGatlas-gene-832 basu168 BSGatlas transcript 732646 736113 . + . ID=BSGatlas-transcript-757;color=#FF9900;Parent=BSGatlas-gene-833;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 732646 732954 . + . ID=BSGatlas-5'UTR-449;Parent=BSGatlas-transcript-757;comment="5'UTR" basu168 BSGatlas UTR 732824 732905 . - . ID=BSGatlas-5'UTR-450;Parent=BSGatlas-transcript-756;comment="5'UTR" basu168 BSGatlas transcript 732898 736113 . + . ID=BSGatlas-transcript-758;color=#FF9900;Parent=BSGatlas-gene-833;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 732898 732954 . + . ID=BSGatlas-5'UTR-451;Parent=BSGatlas-transcript-758;comment="5'UTR" basu168 BSGatlas gene 732955 736113 . + . ID=BSGatlas-gene-833;color=#1E90FF;Name=swrC;locus_tag=BSU_06710,BSU06710 basu168 BSGatlas CDS 732955 736113 . + 0 ID=BSGatlas-gene-833_transcribed;color=#1E90FF;Name=swrC;Parent=BSGatlas-transcript-757,BSGatlas-transcript-758;comment="surfactin exporter involved in surfactinself-resistance";go="GO:0005215 transporter activity,GO:0005515 protein binding,GO:0006810 transport,GO:0016020 membrane,GO:0046677 response to antibiotic";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.13 Resistance against toxins/ antibiotics,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="swrC,yerP";derives_from=BSGatlas-gene-833 basu168 BSGatlas transcript 736378 745999 . + . ID=BSGatlas-transcript-4940;color=#FF9900;Parent=BSGatlas-gene-834,BSGatlas-gene-835,BSGatlas-gene-837,BSGatlas-gene-838,BSGatlas-gene-839,BSGatlas-gene-840;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 736378 739554 . + . ID=BSGatlas-transcript-759;color=#FF9900;Parent=BSGatlas-gene-834,BSGatlas-gene-835;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 736378 736435 . + . ID=BSGatlas-5'UTR-452;Parent=BSGatlas-transcript-759,BSGatlas-transcript-4940;comment="5'UTR" basu168 BSGatlas gene 736436 737347 . + . ID=BSGatlas-gene-834;color=#1E90FF;Name=dgkB;locus_tag=BSU_06720,BSU06720 basu168 BSGatlas CDS 736436 737347 . + 0 ID=BSGatlas-gene-834_transcribed;color=#1E90FF;Name=dgkB;Parent=BSGatlas-transcript-759,BSGatlas-transcript-4940;comment="diacylglycerol kinase";ec="2.7.1.107,EC-2.7.1.107";go="GO:0000166 nucleotide binding,GO:0003951 NAD+ kinase activity,GO:0004143 diacylglycerol kinase activity,GO:0005524 ATP binding,GO:0006629 lipid metabolic process,GO:0007205 protein kinase C-activating G protein-coupled receptor signaling pathway,GO:0008152 metabolic process,GO:0008654 phospholipid biosynthetic process,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0046872 metal ion binding,GO:0070395 lipoteichoic acid biosynthetic process";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Glycerolipid metabolism (ko00561),Glycerophospholipid metabolism (ko00564),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.3 Biosynthesis of lipoteichoic acid,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.2 Biosynthesis of lipoteichoic acid";synonyms="dagK,dgkB,yerQ";derives_from=BSGatlas-gene-834 basu168 BSGatlas UTR 737348 737602 . + . ID=BSGatlas-internal_UTR-216;Parent=BSGatlas-transcript-759,BSGatlas-transcript-4940;comment="internal_UTR" basu168 BSGatlas gene 737603 738982 . + . ID=BSGatlas-gene-835;color=#1E90FF;Name=rlmCD;locus_tag=BSU_06730,BSU06730 basu168 BSGatlas CDS 737603 738982 . + 0 ID=BSGatlas-gene-835_transcribed;color=#1E90FF;Name=rlmCD;Parent=BSGatlas-transcript-759,BSGatlas-transcript-4940;comment="methyltransferase of m5U747 and m5U1939 in 23SRNA";ec="2.1.1.189;2.1.1.190,2.1.1.190,EC-2.1.1.189;EC-2.1.1.190";go="GO:0003723 RNA binding,GO:0006364 rRNA processing,GO:0006396 RNA processing,GO:0008168 methyltransferase activity,GO:0008173 RNA methyltransferase activity,GO:0016740 transferase activity,GO:0031167 rRNA methylation,GO:0032259 methylation,GO:0046872 metal ion binding,GO:0051536 iron-sulfur cluster binding,GO:0051539 4 iron, 4 sulfur cluster binding,GO:0070041 rRNA (uridine-C5-)-methyltransferase activity,GO:0070475 rRNA base methylation";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.2 rRNA modification and maturation";synonyms="rlmCD,yefA,yerS";derives_from=BSGatlas-gene-835 basu168 BSGatlas UTR 738983 739877 . + . ID=BSGatlas-internal_UTR-217;Parent=BSGatlas-transcript-4940;comment="internal_UTR" basu168 BSGatlas UTR 738983 739554 . + . ID=BSGatlas-3'UTR-269;Parent=BSGatlas-transcript-759;comment="3'UTR" basu168 BSGatlas gene 738995 739897 . - . ID=BSGatlas-gene-836;color=#3474B3;Name=yefB;locus_tag=BSU_06740,BSU06740 basu168 BSGatlas transcript 738995 739897 . - . ID=BSGatlas-transcript-761;color=#B37924;Parent=BSGatlas-gene-836;comment="Based on: BsubCyc" basu168 BSGatlas CDS 738995 739897 . - 0 ID=BSGatlas-gene-836_transcribed;color=#3474B3;Name=yefB;Parent=BSGatlas-transcript-761;comment="putative site-specific recombinase / invertase;HGT island";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.6 DNA repair/ recombination/ based on similarity";synonyms="yefB";derives_from=BSGatlas-gene-836 basu168 BSGatlas gene 739878 740213 . + . ID=BSGatlas-gene-837;color=#1E90FF;Name=yefC;locus_tag=BSU_06750,BSU06750 basu168 BSGatlas CDS 739878 740213 . + 0 ID=BSGatlas-gene-837_transcribed;color=#1E90FF;Name=yefC;Parent=BSGatlas-transcript-4940;comment="putative resolvase; HGT island";go="GO:0000150 recombinase activity,GO:0003677 DNA binding,GO:0006310 DNA recombination";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.6 DNA repair/ recombination/ based on similarity";synonyms="yefC";derives_from=BSGatlas-gene-837 basu168 BSGatlas UTR 740214 740287 . + . ID=BSGatlas-internal_UTR-218;Parent=BSGatlas-transcript-4940;comment="internal_UTR" basu168 BSGatlas gene 740288 742927 . + . ID=BSGatlas-gene-838;color=#1E90FF;Name=dnmA;locus_tag=BSU_06760,BSU06760 basu168 BSGatlas CDS 740288 742927 . + 0 ID=BSGatlas-gene-838_transcribed;color=#1E90FF;Name=dnmA;Parent=BSGatlas-transcript-4940;comment="putative restriction type II methylase; HGTisland";go="GO:0008168 methyltransferase activity,GO:0009307 DNA restriction-modification system,GO:0016740 transferase activity,GO:0032259 methylation";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.9 Other regulators";synonyms="dnmA,yeeA";derives_from=BSGatlas-gene-838 basu168 BSGatlas gene 742939 744738 . + . ID=BSGatlas-gene-839;color=#1E90FF;Name=yeeB;locus_tag=BSU_06770,BSU06770 basu168 BSGatlas CDS 742939 744738 . + 0 ID=BSGatlas-gene-839_transcribed;color=#1E90FF;Name=yeeB;Parent=BSGatlas-transcript-4940;comment="putative DNA helicase / endonuclease; HGTisland";go="GO:0000166 nucleotide binding,GO:0003676 nucleic acid binding,GO:0004386 helicase activity,GO:0005524 ATP binding,GO:0008026 ATP-dependent helicase activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yeeB";derives_from=BSGatlas-gene-839 basu168 BSGatlas UTR 744739 744850 . + . ID=BSGatlas-internal_UTR-219;Parent=BSGatlas-transcript-4940;comment="internal_UTR" basu168 BSGatlas gene 744851 745999 . + . ID=BSGatlas-gene-840;color=#1E90FF;Name=yeeC;locus_tag=BSU_06780,BSU06780 basu168 BSGatlas CDS 744851 745999 . + 0 ID=BSGatlas-gene-840_transcribed;color=#1E90FF;Name=yeeC;Parent=BSGatlas-transcript-4940;comment="conserved hypothetical protein; HGT island";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yeeC";derives_from=BSGatlas-gene-840 basu168 BSGatlas gene 746261 746566 . - . ID=BSGatlas-gene-841;color=#3474B3;Name=yeeD;locus_tag=BSU_06790,BSU06790 basu168 BSGatlas CDS 746261 746566 . - 0 ID=BSGatlas-gene-841_transcribed;color=#3474B3;Name=yeeD;comment="conserved hypothetical protein; HGT island";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yeeD";derives_from=BSGatlas-gene-841 basu168 BSGatlas gene 746633 746839 . - . ID=BSGatlas-gene-842;color=#3474B3;Name=yezA;locus_tag=BSU_06800,BSU06800 basu168 BSGatlas CDS 746633 746839 . - 0 ID=BSGatlas-gene-842_transcribed;color=#3474B3;Name=yezA;comment="hypothetical protein; HGT island";go="GO:0015643 toxic substance binding";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yezA";derives_from=BSGatlas-gene-842 basu168 BSGatlas transcript 747079 749600 . - . ID=BSGatlas-transcript-763;color=#B37924;Parent=BSGatlas-gene-844,BSGatlas-gene-843;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 747079 747928 . - . ID=BSGatlas-transcript-762;color=#B37924;Parent=BSGatlas-gene-843;comment="Based on: SubtiWiki" basu168 BSGatlas gene 747079 747534 . - . ID=BSGatlas-gene-843;color=#3474B3;Name=yezG;locus_tag=BSU_06811,BSU06811 basu168 BSGatlas CDS 747079 747534 . - 0 ID=BSGatlas-gene-843_transcribed;color=#3474B3;Name=yezG;Parent=BSGatlas-transcript-762,BSGatlas-transcript-763;comment="conserved hypothetical protein; HGT island";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 4.3.17.2 Type 2 TA systems,SW 4.3.18 Toxins, antitoxins and immunity against toxins/ based on similarity,SW 6 Groups of genes,SW 6.1 Essential genes";synonyms="yezG";derives_from=BSGatlas-gene-843 basu168 BSGatlas UTR 747535 747928 . - . ID=BSGatlas-5'UTR-453;Parent=BSGatlas-transcript-762;comment="5'UTR" basu168 BSGatlas UTR 747535 747553 . - . ID=BSGatlas-internal_UTR-220;Parent=BSGatlas-transcript-763;comment="internal_UTR" basu168 BSGatlas gene 747554 749563 . - . ID=BSGatlas-gene-844;color=#3474B3;Name=yeeF;locus_tag=BSU_06812,BSU06812 basu168 BSGatlas CDS 747554 749563 . - 0 ID=BSGatlas-gene-844_transcribed;color=#3474B3;Name=yeeF;Parent=BSGatlas-transcript-763;comment="putative nucleic acid binding protein; HGTisland";go="GO:0004518 nuclease activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.17 Toxins, antitoxins and immunity against toxins,SW 4.3.17.2 Type 2 TA systems,SW 4.3.18 Toxins, antitoxins and immunity against toxins/ based on similarity";synonyms="yeeF";derives_from=BSGatlas-gene-844 basu168 BSGatlas UTR 749564 749600 . - . ID=BSGatlas-5'UTR-454;Parent=BSGatlas-transcript-763;comment="5'UTR" basu168 BSGatlas gene 749775 750797 . + . ID=BSGatlas-gene-845;color=#1E90FF;Name=yeeG;locus_tag=BSU_06820,BSU06820 basu168 BSGatlas CDS 749775 750797 . + 0 ID=BSGatlas-gene-845_transcribed;color=#1E90FF;Name=yeeG;comment="putative phage receptor protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yeeG";derives_from=BSGatlas-gene-845 basu168 BSGatlas transcript 750928 752270 . + . ID=BSGatlas-transcript-766;color=#FF9900;Parent=BSGatlas-gene-846,BSGatlas-gene-847;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 750928 752252 . + . ID=BSGatlas-transcript-765;color=#FF9900;Parent=BSGatlas-gene-846,BSGatlas-gene-847;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 750928 752089 . + . ID=BSGatlas-transcript-764;color=#FF9900;Parent=BSGatlas-gene-846;comment="Based on: DBTBS" basu168 BSGatlas UTR 750928 750958 . + . ID=BSGatlas-5'UTR-455;Parent=BSGatlas-transcript-764,BSGatlas-transcript-765,BSGatlas-transcript-766;comment="5'UTR" basu168 BSGatlas gene 750959 752089 . + . ID=BSGatlas-gene-846;color=#1E90FF;Name=rapH;locus_tag=BSU_06830,BSU06830 basu168 BSGatlas CDS 750959 752089 . + 0 ID=BSGatlas-gene-846_transcribed;color=#1E90FF;Name=rapH;Parent=BSGatlas-transcript-764,BSGatlas-transcript-765,BSGatlas-transcript-766;comment="response regulator aspartate phosphatase";ec="3.1.-.-";kegg_pathways="Quorum sensing (ko02024)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.2 Response regulator aspartate phosphatase,SW 3.4.7 phosphorelay,SW 3.4.7.5 Phosphatases controlling the phosphorelay,SW 3.4.8 Quorum sensing,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay,SW 4.2.2.5 Phosphatases controlling the phosphorelay";synonyms="rapH,yeeH,yzqA";derives_from=BSGatlas-gene-846 basu168 BSGatlas transcript 752079 752270 . + . ID=BSGatlas-transcript-768;color=#FF9900;Parent=BSGatlas-gene-847;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 752079 752252 . + . ID=BSGatlas-gene-847;color=#1E90FF;Name=phrH;locus_tag=BSU_06839,BSU06839 basu168 BSGatlas transcript 752079 752252 . + . ID=BSGatlas-transcript-767;color=#FF9900;Parent=BSGatlas-gene-847;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas CDS 752079 752252 . + 0 ID=BSGatlas-gene-847_transcribed;color=#1E90FF;Name=phrH;Parent=BSGatlas-transcript-765,BSGatlas-transcript-766,BSGatlas-transcript-767,BSGatlas-transcript-768;comment="hexapeptide (TDRNTT) inhibitor of regulatorycascade";go="GO:0004857 enzyme inhibitor activity,GO:0005576 extracellular region";kegg_pathways="Quorum sensing (ko02024)";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.3 Control of response regulators/ other,SW 3.4.7 phosphorelay,SW 3.4.7.6 Other protein controlling the activity of the phosphorelay,SW 3.4.8 Quorum sensing,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.2 phosphorelay,SW 4.2.2.6 Other protein controlling the activity of the phosphorelay,SW 6 Groups of genes,SW 6.8 Short peptides";synonyms="phrH";derives_from=BSGatlas-gene-847 basu168 BSGatlas UTR 752253 752270 . + . ID=BSGatlas-3'UTR-271;Parent=BSGatlas-transcript-766,BSGatlas-transcript-768;comment="3'UTR" basu168 BSGatlas transcript 752359 753131 . + . ID=BSGatlas-transcript-769;color=#FF9900;Parent=BSGatlas-gene-848;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 752359 752411 . + . ID=BSGatlas-5'UTR-456;Parent=BSGatlas-transcript-769;comment="5'UTR" basu168 BSGatlas gene 752412 753131 . + . ID=BSGatlas-gene-848;color=#1E90FF;Name=yeeI;locus_tag=BSU_06840,BSU06840 basu168 BSGatlas CDS 752412 753131 . + 0 ID=BSGatlas-gene-848_transcribed;color=#1E90FF;Name=yeeI;Parent=BSGatlas-transcript-769;comment="putative DNA integrase or transcriptionalregulator";go="GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yeeI";derives_from=BSGatlas-gene-848 basu168 BSGatlas transcript 753020 753724 . + . ID=BSGatlas-transcript-770;color=#FF9900;Parent=BSGatlas-gene-849;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 753020 753264 . + . ID=BSGatlas-5'UTR-457;Parent=BSGatlas-transcript-770;comment="5'UTR" basu168 BSGatlas transcript 753226 753724 . + . ID=BSGatlas-transcript-771;color=#FF9900;Parent=BSGatlas-gene-849;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 753226 753264 . + . ID=BSGatlas-5'UTR-458;Parent=BSGatlas-transcript-771;comment="5'UTR" basu168 BSGatlas gene 753265 753702 . + . ID=BSGatlas-gene-849;color=#1E90FF;Name=yeeK;locus_tag=BSU_06850,BSU06850 basu168 BSGatlas CDS 753265 753702 . + 0 ID=BSGatlas-gene-849_transcribed;color=#1E90FF;Name=yeeK;Parent=BSGatlas-transcript-770,BSGatlas-transcript-771;comment="spore inner coat protein";go="GO:0030435 sporulation resulting in formation of a cellular spore,GO:0031160 spore wall";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.5 Class V";synonyms="yeeK";derives_from=BSGatlas-gene-849 basu168 BSGatlas UTR 753703 753724 . + . ID=BSGatlas-3'UTR-272;Parent=BSGatlas-transcript-770,BSGatlas-transcript-771;comment="3'UTR" basu168 BSGatlas transcript 753790 754401 . + . ID=BSGatlas-transcript-772;color=#FF9900;Parent=BSGatlas-gene-850;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 753790 753816 . + . ID=BSGatlas-5'UTR-459;Parent=BSGatlas-transcript-772;comment="5'UTR" basu168 BSGatlas gene 753817 754401 . + . ID=BSGatlas-gene-850;color=#1E90FF;Name=yezE;locus_tag=BSU_06860,BSU06860 basu168 BSGatlas CDS 753817 754401 . + 0 ID=BSGatlas-gene-850_transcribed;color=#1E90FF;Name=yezE;Parent=BSGatlas-transcript-772;comment="putative transcriptional regulator (TetRfamily)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yezE";derives_from=BSGatlas-gene-850 basu168 BSGatlas transcript 754480 755826 . + . ID=BSGatlas-transcript-773;color=#FF9900;Parent=BSGatlas-gene-851,BSGatlas-gene-852;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 754480 754923 . + . ID=BSGatlas-gene-851;color=#1E90FF;Name=yesE;locus_tag=BSU_06870,BSU06870 basu168 BSGatlas CDS 754480 754923 . + 0 ID=BSGatlas-gene-851_transcribed;color=#1E90FF;Name=yesE;Parent=BSGatlas-transcript-773;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yeeL,yesE";derives_from=BSGatlas-gene-851 basu168 BSGatlas gene 754920 755780 . + . ID=BSGatlas-gene-852;color=#1E90FF;Name=yesF;locus_tag=BSU_06880,BSU06880 basu168 BSGatlas CDS 754920 755780 . + 0 ID=BSGatlas-gene-852_transcribed;color=#1E90FF;Name=yesF;Parent=BSGatlas-transcript-773;comment="putative oxidoreductase";ec="1.-.-.-";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yeeM,yesF,yfxB";derives_from=BSGatlas-gene-852 basu168 BSGatlas UTR 755781 755826 . + . ID=BSGatlas-3'UTR-273;Parent=BSGatlas-transcript-773;comment="3'UTR" basu168 BSGatlas transcript 755877 757978 . + . ID=BSGatlas-transcript-775;color=#FF9900;Parent=BSGatlas-gene-853,BSGatlas-gene-854,BSGatlas-gene-855,BSGatlas-gene-856,BSGatlas-gene-857;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 755877 757653 . + . ID=BSGatlas-transcript-774;color=#FF9900;Parent=BSGatlas-gene-853,BSGatlas-gene-854,BSGatlas-gene-855,BSGatlas-gene-856;comment="Based on: BSGatlas" basu168 BSGatlas UTR 755877 755906 . + . ID=BSGatlas-5'UTR-460;Parent=BSGatlas-transcript-774,BSGatlas-transcript-775;comment="5'UTR" basu168 BSGatlas gene 755907 756155 . + . ID=BSGatlas-gene-853;color=#1E90FF;Name=cotJA;locus_tag=BSU_06890,BSU06890 basu168 BSGatlas CDS 755907 756155 . + 0 ID=BSGatlas-gene-853_transcribed;color=#1E90FF;Name=cotJA;Parent=BSGatlas-transcript-774,BSGatlas-transcript-775;comment="component of the inner spore coat";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.8 Not yet assigned";synonyms="cotJA";derives_from=BSGatlas-gene-853 basu168 BSGatlas gene 756139 756402 . + . ID=BSGatlas-gene-854;color=#1E90FF;Name=cotJB;locus_tag=BSU_06900,BSU06900 basu168 BSGatlas CDS 756139 756402 . + 0 ID=BSGatlas-gene-854_transcribed;color=#1E90FF;Name=cotJB;Parent=BSGatlas-transcript-774,BSGatlas-transcript-775;comment="component of the inner spore coat";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.8 Not yet assigned";synonyms="cotJB";derives_from=BSGatlas-gene-854 basu168 BSGatlas gene 756417 756986 . + . ID=BSGatlas-gene-855;color=#1E90FF;Name=cotJC;locus_tag=BSU_06910,BSU06910 basu168 BSGatlas CDS 756417 756986 . + 0 ID=BSGatlas-gene-855_transcribed;color=#1E90FF;Name=cotJC;Parent=BSGatlas-transcript-774,BSGatlas-transcript-775;comment="enzyme component of the inner spore coat";ec="1.11.1.6,EC-1.11.1.21;EC-1.11.1.6";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.1 Spore coat proteins,SW 4.2.1.1.8 Not yet assigned";synonyms="cotJC";derives_from=BSGatlas-gene-855 basu168 BSGatlas UTR 756987 757110 . + . ID=BSGatlas-internal_UTR-221;Parent=BSGatlas-transcript-774,BSGatlas-transcript-775;comment="internal_UTR" basu168 BSGatlas transcript 757067 757653 . + . ID=BSGatlas-transcript-776;color=#FF9900;Parent=BSGatlas-gene-856;comment="Based on: BSGatlas" basu168 BSGatlas UTR 757067 757110 . + . ID=BSGatlas-5'UTR-461;Parent=BSGatlas-transcript-776;comment="5'UTR" basu168 BSGatlas gene 757111 757653 . + . ID=BSGatlas-gene-856;color=#1E90FF;Name=yesJ;locus_tag=BSU_06920,BSU06920 basu168 BSGatlas CDS 757111 757653 . + 0 ID=BSGatlas-gene-856_transcribed;color=#1E90FF;Name=yesJ;Parent=BSGatlas-transcript-774,BSGatlas-transcript-775,BSGatlas-transcript-776;comment="putative acetyltransferase";ec="2.3.1.-";go="GO:0008080 N-acetyltransferase activity,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="yeeN,yesJ,yfxC,yfxD";derives_from=BSGatlas-gene-856 basu168 BSGatlas UTR 757654 757675 . + . ID=BSGatlas-internal_UTR-222;Parent=BSGatlas-transcript-775;comment="internal_UTR" basu168 BSGatlas gene 757676 757978 . + . ID=BSGatlas-gene-857;color=#1E90FF;Name=yesK;locus_tag=BSU_06930,BSU06930 basu168 BSGatlas CDS 757676 757978 . + 0 ID=BSGatlas-gene-857_transcribed;color=#1E90FF;Name=yesK;Parent=BSGatlas-transcript-775;comment="putative membrane component";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yesK";derives_from=BSGatlas-gene-857 basu168 BSGatlas transcript 758046 761558 . + . ID=BSGatlas-transcript-777;color=#FF9900;Parent=BSGatlas-gene-858,BSGatlas-gene-859,BSGatlas-gene-860;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 758046 758092 . + . ID=BSGatlas-5'UTR-462;Parent=BSGatlas-transcript-777;comment="5'UTR" basu168 BSGatlas gene 758093 758722 . + . ID=BSGatlas-gene-858;color=#1E90FF;Name=yesL;locus_tag=BSU_06940,BSU06940 basu168 BSGatlas CDS 758093 758722 . + 0 ID=BSGatlas-gene-858_transcribed;color=#1E90FF;Name=yesL;Parent=BSGatlas-transcript-777;comment="putative permease or sensor of a three componentsystem for pectin and rhamnogalacturonan transport anddegradation";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yesL";derives_from=BSGatlas-gene-858 basu168 BSGatlas gene 758719 760452 . + . ID=BSGatlas-gene-859;color=#1E90FF;Name=yesM;locus_tag=BSU_06950,BSU06950 basu168 BSGatlas CDS 758719 760452 . + 0 ID=BSGatlas-gene-859_transcribed;color=#1E90FF;Name=yesM;Parent=BSGatlas-transcript-777;comment="two-component sensor histidine kinase [YesN]";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0004871 NA,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="yesM";derives_from=BSGatlas-gene-859 basu168 BSGatlas gene 760452 761558 . + . ID=BSGatlas-gene-860;color=#1E90FF;Name=yesN;locus_tag=BSU_06960,BSU06960 basu168 BSGatlas CDS 760452 761558 . + 0 ID=BSGatlas-gene-860_transcribed;color=#1E90FF;Name=yesN;Parent=BSGatlas-transcript-777;comment="two-component response regulator [YesM]";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction,GO:0043565 sequence-specific DNA binding";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.11 Efp-dependent proteins,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="yesN";derives_from=BSGatlas-gene-860 basu168 BSGatlas transcript 761622 765815 . + . ID=BSGatlas-transcript-4941;color=#FF9900;Parent=BSGatlas-gene-861,BSGatlas-gene-862,BSGatlas-gene-863,BSGatlas-gene-864;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 761622 761661 . + . ID=BSGatlas-5'UTR-463;Parent=BSGatlas-transcript-4941;comment="5'UTR" basu168 BSGatlas gene 761662 762945 . + . ID=BSGatlas-gene-861;color=#1E90FF;Name=rhiL;locus_tag=BSU_06970,BSU06970 basu168 BSGatlas CDS 761662 762945 . + 0 ID=BSGatlas-gene-861_transcribed;color=#1E90FF;Name=rhiL;Parent=BSGatlas-transcript-4941;comment="pectin degradation byproducts (rhamnoseoligosaccharides)-binding lipoprotein";go="GO:0005215 transporter activity,GO:0006810 transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.1 Uptake of carbon sources,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="rhiL,yesO";derives_from=BSGatlas-gene-861 basu168 BSGatlas gene 762942 763871 . + . ID=BSGatlas-gene-862;color=#1E90FF;Name=rhiF;locus_tag=BSU_06980,BSU06980 basu168 BSGatlas CDS 762942 763871 . + 0 ID=BSGatlas-gene-862_transcribed;color=#1E90FF;Name=rhiF;Parent=BSGatlas-transcript-4941;comment="rhamnogalacturonan permease";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.1 Uptake of carbon sources,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="rhiF,yesP";derives_from=BSGatlas-gene-862 basu168 BSGatlas gene 763875 764765 . + . ID=BSGatlas-gene-863;color=#1E90FF;Name=rhiG;locus_tag=BSU_06990,BSU06990 basu168 BSGatlas CDS 763875 764765 . + 0 ID=BSGatlas-gene-863_transcribed;color=#1E90FF;Name=rhiG;Parent=BSGatlas-transcript-4941;comment="rhamnogalacturonan permease";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.1 Uptake of carbon sources,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="rhiG,yesQ";derives_from=BSGatlas-gene-863 basu168 BSGatlas gene 764781 765815 . + . ID=BSGatlas-gene-864;color=#1E90FF;Name=rhiN;locus_tag=BSU_07000,BSU07000 basu168 BSGatlas CDS 764781 765815 . + 0 ID=BSGatlas-gene-864_transcribed;color=#1E90FF;Name=rhiN;Parent=BSGatlas-transcript-4941;comment="rhamnogalacturonan hydrolase";ec="3.2.1.172,EC-3.2.1.172";go="GO:0003824 catalytic activity,GO:0005737 cytoplasm,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="rhiN,yesR";derives_from=BSGatlas-gene-864 basu168 BSGatlas transcript 765838 776790 . + . ID=BSGatlas-transcript-779;color=#FF9900;Parent=BSGatlas-gene-865,BSGatlas-gene-866,BSGatlas-gene-867,BSGatlas-gene-868,BSGatlas-gene-869,BSGatlas-gene-870,BSGatlas-gene-871,BSGatlas-gene-872;comment="Based on: SubtiWiki" basu168 BSGatlas gene 765838 768123 . + . ID=BSGatlas-gene-865;color=#1E90FF;Name=rhgR;locus_tag=BSU_07010,BSU07010 basu168 BSGatlas CDS 765838 768123 . + 0 ID=BSGatlas-gene-865_transcribed;color=#1E90FF;Name=rhgR;Parent=BSGatlas-transcript-779;comment="transcriptional regulator (AraC/XylS family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005886 plasma membrane,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="rhgR,yesS";derives_from=BSGatlas-gene-865 basu168 BSGatlas gene 768137 768835 . + . ID=BSGatlas-gene-866;color=#1E90FF;Name=yesT;locus_tag=BSU_07020,BSU07020 basu168 BSGatlas CDS 768137 768835 . + 0 ID=BSGatlas-gene-866_transcribed;color=#1E90FF;Name=yesT;Parent=BSGatlas-transcript-779;comment="rhamnogalacturonan acetylesterase";ec="3.1.1.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="yesT";derives_from=BSGatlas-gene-866 basu168 BSGatlas gene 768828 769490 . + . ID=BSGatlas-gene-867;color=#1E90FF;Name=yesU;locus_tag=BSU_07030,BSU07030 basu168 BSGatlas CDS 768828 769490 . + 0 ID=BSGatlas-gene-867_transcribed;color=#1E90FF;Name=yesU;Parent=BSGatlas-transcript-779;comment="putative enzyme";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yesU";derives_from=BSGatlas-gene-867 basu168 BSGatlas gene 769487 770113 . + . ID=BSGatlas-gene-868;color=#1E90FF;Name=yesV;locus_tag=BSU_07040,BSU07040 basu168 BSGatlas CDS 769487 770113 . + 0 ID=BSGatlas-gene-868_transcribed;color=#1E90FF;Name=yesV;Parent=BSGatlas-transcript-779;comment="putative integral inner membrane component";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="yesV";derives_from=BSGatlas-gene-868 basu168 BSGatlas UTR 770114 770233 . + . ID=BSGatlas-internal_UTR-223;Parent=BSGatlas-transcript-779;comment="internal_UTR" basu168 BSGatlas gene 770234 772096 . + . ID=BSGatlas-gene-869;color=#1E90FF;Name=yesW;locus_tag=BSU_07050,BSU07050 basu168 BSGatlas CDS 770234 772096 . + 0 ID=BSGatlas-gene-869_transcribed;color=#1E90FF;Name=yesW;Parent=BSGatlas-transcript-779;comment="rhamnogalacturonan endolyase";ec="4.2.2.23,EC-4.2.2.23";go="GO:0005576 extracellular region,GO:0008152 metabolic process,GO:0016829 lyase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="yesW";derives_from=BSGatlas-gene-869 basu168 BSGatlas UTR 772097 772141 . + . ID=BSGatlas-internal_UTR-224;Parent=BSGatlas-transcript-779;comment="internal_UTR" basu168 BSGatlas gene 772142 773980 . + . ID=BSGatlas-gene-870;color=#1E90FF;Name=yesX;locus_tag=BSU_07060,BSU07060 basu168 BSGatlas CDS 772142 773980 . + 0 ID=BSGatlas-gene-870_transcribed;color=#1E90FF;Name=yesX;Parent=BSGatlas-transcript-779;comment="rhamnogalacturonan exolyase";ec="4.2.2.24,EC-4.2.2.24";go="GO:0005576 extracellular region,GO:0008152 metabolic process,GO:0016829 lyase activity,GO:0046872 metal ion binding";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="yesX";derives_from=BSGatlas-gene-870 basu168 BSGatlas UTR 773981 774137 . + . ID=BSGatlas-internal_UTR-225;Parent=BSGatlas-transcript-779;comment="internal_UTR" basu168 BSGatlas gene 774138 774791 . + . ID=BSGatlas-gene-871;color=#1E90FF;Name=yesY;locus_tag=BSU_07070,BSU07070 basu168 BSGatlas CDS 774138 774791 . + 0 ID=BSGatlas-gene-871_transcribed;color=#1E90FF;Name=yesY;Parent=BSGatlas-transcript-779;comment="rhamnogalacturonan acetylesterase";ec="3.1.1.-";go="GO:0006629 lipid metabolic process,GO:0016787 hydrolase activity,GO:0016788 hydrolase activity, acting on ester bonds";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="yesY";derives_from=BSGatlas-gene-871 basu168 BSGatlas gene 774799 776790 . + . ID=BSGatlas-gene-872;color=#1E90FF;Name=yesZ;locus_tag=BSU_07080,BSU07080 basu168 BSGatlas CDS 774799 776790 . + 0 ID=BSGatlas-gene-872_transcribed;color=#1E90FF;Name=yesZ;Parent=BSGatlas-transcript-779;comment="beta-galacturonidase";ec="3.2.1.23,3.2.1.67";go="GO:0004565 beta-galactosidase activity,GO:0005975 carbohydrate metabolic process,GO:0006012 galactose metabolic process,GO:0008152 metabolic process,GO:0009341 beta-galactosidase complex,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0046872 metal ion binding";kegg_pathways="Galactose metabolism (ko00052),Metabolic pathways (ko01100),Other glycan degradation (ko00511),Sphingolipid metabolism (ko00600)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="yesZ";derives_from=BSGatlas-gene-872 basu168 BSGatlas gene 776834 779407 . + . ID=BSGatlas-gene-873;color=#1E90FF;Name=yetA;locus_tag=BSU_07090,BSU07090 basu168 BSGatlas CDS 776834 779407 . + 0 ID=BSGatlas-gene-873_transcribed;color=#1E90FF;Name=yetA;comment="putative enzyme";ec="3.1.-.-";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin";synonyms="yetA";derives_from=BSGatlas-gene-873 basu168 BSGatlas gene 779529 781037 . + . ID=BSGatlas-gene-874;color=#1E90FF;Name=lplA;locus_tag=BSU_07100,BSU07100 basu168 BSGatlas CDS 779529 781037 . + 0 ID=BSGatlas-gene-874_transcribed;color=#1E90FF;Name=lplA;comment="lipoprotein transporter binding protein foralpha-galacturonides";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lplA";derives_from=BSGatlas-gene-874 basu168 BSGatlas gene 781092 782048 . + . ID=BSGatlas-gene-875;color=#1E90FF;Name=lplB;locus_tag=BSU_07110,BSU07110 basu168 BSGatlas CDS 781092 782048 . + 0 ID=BSGatlas-gene-875_transcribed;color=#1E90FF;Name=lplB;comment="ABC transporter (permease) foralpha-galacturonides";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lplB";derives_from=BSGatlas-gene-875 basu168 BSGatlas gene 782062 782949 . + . ID=BSGatlas-gene-876;color=#1E90FF;Name=lplC;locus_tag=BSU_07120,BSU07120 basu168 BSGatlas CDS 782062 782949 . + 0 ID=BSGatlas-gene-876_transcribed;color=#1E90FF;Name=lplC;comment="ABC transporter (permease) foralpha-galacturonides";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lplC";derives_from=BSGatlas-gene-876 basu168 BSGatlas transcript 782720 785096 . + . ID=BSGatlas-transcript-780;color=#FF9900;Parent=BSGatlas-gene-877,BSGatlas-gene-878;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 782720 782957 . + . ID=BSGatlas-5'UTR-464;Parent=BSGatlas-transcript-780;comment="5'UTR" basu168 BSGatlas gene 782958 784298 . + . ID=BSGatlas-gene-877;color=#1E90FF;Name=lplD;locus_tag=BSU_07130,BSU07130 basu168 BSGatlas CDS 782958 784298 . + 0 ID=BSGatlas-gene-877_transcribed;color=#1E90FF;Name=lplD;Parent=BSGatlas-transcript-780;comment="alpha-galacturonidase";ec="3.2.1.67,EC-3.2.1.67";go="GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0005975 carbohydrate metabolic process,GO:0008152 metabolic process,GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0046872 metal ion binding,GO:0047911 galacturan 1,4-alpha-galacturonidase activity,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Pentose and glucuronate interconversions (ko00040)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.26 Utilization of pectin,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="lplD";derives_from=BSGatlas-gene-877 basu168 BSGatlas UTR 784299 784380 . + . ID=BSGatlas-internal_UTR-226;Parent=BSGatlas-transcript-780;comment="internal_UTR" basu168 BSGatlas gene 784381 785076 . + . ID=BSGatlas-gene-878;color=#1E90FF;Name=yetF;locus_tag=BSU_07140,BSU07140 basu168 BSGatlas CDS 784381 785076 . + 0 ID=BSGatlas-gene-878_transcribed;color=#1E90FF;Name=yetF;Parent=BSGatlas-transcript-780;comment="conserved membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yetF";derives_from=BSGatlas-gene-878 basu168 BSGatlas UTR 785077 785096 . + . ID=BSGatlas-3'UTR-275;Parent=BSGatlas-transcript-780;comment="3'UTR" basu168 BSGatlas transcript 785113 785465 . - . ID=BSGatlas-transcript-783;color=#B37924;Parent=BSGatlas-gene-879;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 785113 785439 . - . ID=BSGatlas-gene-879;color=#3474B3;Name=hmoA;locus_tag=BSU_07150,BSU07150 basu168 BSGatlas CDS 785113 785439 . - 0 ID=BSGatlas-gene-879_transcribed;color=#3474B3;Name=hmoA;Parent=BSGatlas-transcript-783;comment="heme-degrading monooxygenase";ec="1.14.14.18";go="GO:0004392 heme oxygenase (decyclizing) activity,GO:0004497 monooxygenase activity,GO:0005737 cytoplasm,GO:0016491 oxidoreductase activity,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Porphyrin and chlorophyll metabolism (ko00860)";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.3 Acquisition of iron / Other,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.1 Acquisition of iron / Other";synonyms="hmoA,yetG";derives_from=BSGatlas-gene-879 basu168 BSGatlas UTR 785440 785465 . - . ID=BSGatlas-5'UTR-465;Parent=BSGatlas-transcript-783;comment="5'UTR" basu168 BSGatlas transcript 785543 785942 . - . ID=BSGatlas-transcript-784;color=#B37924;Parent=BSGatlas-gene-880;comment="Based on: SubtiWiki" basu168 BSGatlas gene 785543 785905 . - . ID=BSGatlas-gene-880;color=#3474B3;Name=yetH;locus_tag=BSU_07160,BSU07160 basu168 BSGatlas CDS 785543 785905 . - 0 ID=BSGatlas-gene-880_transcribed;color=#3474B3;Name=yetH;Parent=BSGatlas-transcript-784;comment="putative lyase/dioxygenase";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yetH";derives_from=BSGatlas-gene-880 basu168 BSGatlas UTR 785906 785942 . - . ID=BSGatlas-5'UTR-466;Parent=BSGatlas-transcript-784;comment="5'UTR" basu168 BSGatlas gene 785976 786536 . - . ID=BSGatlas-gene-881;color=#8F1D1D;Name=S249;locus_tag=new_785976_786536_c basu168 BSGatlas transcript 785976 786536 . - . ID=BSGatlas-transcript-785;color=#B37924;Parent=BSGatlas-gene-881;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 785976 786536 . - . ID=BSGatlas-gene-881_transcribed;color=#8F1D1D;Name=S249;Parent=BSGatlas-transcript-785;synonyms="S249";derives_from=BSGatlas-gene-881 basu168 BSGatlas transcript 786640 787560 . + . ID=BSGatlas-transcript-786;color=#FF9900;Parent=BSGatlas-gene-882,BSGatlas-gene-883;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 786640 786688 . + . ID=BSGatlas-5'UTR-467;Parent=BSGatlas-transcript-786;comment="5'UTR" basu168 BSGatlas gene 786689 787264 . + . ID=BSGatlas-gene-882;color=#1E90FF;Name=yetI;locus_tag=BSU_07170 basu168 BSGatlas CDS 786689 787264 . + 0 ID=BSGatlas-gene-882_transcribed;color=#1E90FF;Name=yetI;Parent=BSGatlas-transcript-786;comment="putative paralog of RsbR; N-terminal part ofYetI";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 6 Groups of genes,SW 6.10 Pseudogenes";synonyms="yetI";derives_from=BSGatlas-gene-882 basu168 BSGatlas gene 787264 787560 . + . ID=BSGatlas-gene-883;color=#1E90FF;Name=yezB;locus_tag=BSU_07180 basu168 BSGatlas CDS 787264 787560 . + 0 ID=BSGatlas-gene-883_transcribed;color=#1E90FF;Name=yezB;Parent=BSGatlas-transcript-786;comment="putative paralog of RsbR; C-terminal part ofYetI";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.1 Sigma factors and their control,SW 3.4.1.2 Control of sigma factors,SW 6 Groups of genes,SW 6.10 Pseudogenes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.4.6 Phosphorylation on a Thr residue";synonyms="yezB";derives_from=BSGatlas-gene-883 basu168 BSGatlas transcript 787660 789628 . + . ID=BSGatlas-transcript-4943;color=#FF9900;Parent=BSGatlas-gene-884,BSGatlas-gene-885,BSGatlas-gene-886;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 787660 789628 . + . ID=BSGatlas-transcript-788;color=#FF9900;Parent=BSGatlas-gene-884,BSGatlas-gene-885,BSGatlas-gene-886;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 787660 788636 . + . ID=BSGatlas-transcript-4942;color=#FF9900;Parent=BSGatlas-gene-884,BSGatlas-gene-885;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 787660 788636 . + . ID=BSGatlas-transcript-787;color=#FF9900;Parent=BSGatlas-gene-884,BSGatlas-gene-885;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 787660 787714 . + . ID=BSGatlas-5'UTR-468;Parent=BSGatlas-transcript-787,BSGatlas-transcript-4942,BSGatlas-transcript-788,BSGatlas-transcript-4943;comment="5'UTR" basu168 BSGatlas gene 787715 787882 . + . ID=BSGatlas-gene-884;color=#1E90FF;Name=yezD;locus_tag=BSU_07190,BSU07190 basu168 BSGatlas CDS 787715 787882 . + 0 ID=BSGatlas-gene-884_transcribed;color=#1E90FF;Name=yezD;Parent=BSGatlas-transcript-787,BSGatlas-transcript-4942,BSGatlas-transcript-788,BSGatlas-transcript-4943;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yezD";derives_from=BSGatlas-gene-884 basu168 BSGatlas UTR 787883 787991 . + . ID=BSGatlas-internal_UTR-227;Parent=BSGatlas-transcript-787,BSGatlas-transcript-4942,BSGatlas-transcript-788,BSGatlas-transcript-4943;comment="internal_UTR" basu168 BSGatlas transcript 787948 789628 . + . ID=BSGatlas-transcript-4945;color=#FF9900;Parent=BSGatlas-gene-885,BSGatlas-gene-886;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 787948 789628 . + . ID=BSGatlas-transcript-790;color=#FF9900;Parent=BSGatlas-gene-885,BSGatlas-gene-886;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 787948 788636 . + . ID=BSGatlas-transcript-4944;color=#FF9900;Parent=BSGatlas-gene-885;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 787948 788636 . + . ID=BSGatlas-transcript-789;color=#FF9900;Parent=BSGatlas-gene-885;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 787948 787991 . + . ID=BSGatlas-5'UTR-469;Parent=BSGatlas-transcript-789,BSGatlas-transcript-4944,BSGatlas-transcript-790,BSGatlas-transcript-4945;comment="5'UTR" basu168 BSGatlas gene 787992 788636 . + . ID=BSGatlas-gene-885;color=#1E90FF;Name=yetJ;locus_tag=BSU_07200,BSU07200 basu168 BSGatlas CDS 787992 788636 . + 0 ID=BSGatlas-gene-885_transcribed;color=#1E90FF;Name=yetJ;Parent=BSGatlas-transcript-787,BSGatlas-transcript-4942,BSGatlas-transcript-788,BSGatlas-transcript-4943,BSGatlas-transcript-789,BSGatlas-transcript-4944,BSGatlas-transcript-790,BSGatlas-transcript-4945;comment="pH-sensitive calcium-leak permease (di-aspartylpH sensor)";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0070588 calcium ion transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.4 Metal ion homeostasis/ Other,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yetJ";derives_from=BSGatlas-gene-885 basu168 BSGatlas gene 788636 789628 . + . ID=BSGatlas-gene-886;color=#1E90FF;Name=yetK;locus_tag=BSU_07210,BSU07210 basu168 BSGatlas CDS 788636 789628 . + 0 ID=BSGatlas-gene-886_transcribed;color=#1E90FF;Name=yetK;Parent=BSGatlas-transcript-788,BSGatlas-transcript-4943,BSGatlas-transcript-790,BSGatlas-transcript-4945;comment="putative efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yetK";derives_from=BSGatlas-gene-886 basu168 BSGatlas transcript 789652 790188 . - . ID=BSGatlas-transcript-791;color=#B37924;Parent=BSGatlas-gene-887;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 789652 790155 . - . ID=BSGatlas-gene-887;color=#3474B3;Name=yetL;locus_tag=BSU_07220,BSU07220 basu168 BSGatlas CDS 789652 790155 . - 0 ID=BSGatlas-gene-887_transcribed;color=#3474B3;Name=yetL;Parent=BSGatlas-transcript-791;comment="transcriptional regulator (FlvL-flavonoids)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005622 intracellular,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="yetL";derives_from=BSGatlas-gene-887 basu168 BSGatlas UTR 790156 790188 . - . ID=BSGatlas-5'UTR-470;Parent=BSGatlas-transcript-791;comment="5'UTR" basu168 BSGatlas gene 790318 791427 . + . ID=BSGatlas-gene-888;color=#1E90FF;Name=yetM;locus_tag=BSU_07230,BSU07230 basu168 BSGatlas transcript 790318 791427 . + . ID=BSGatlas-transcript-792;color=#FF9900;Parent=BSGatlas-gene-888;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas CDS 790318 791427 . + 0 ID=BSGatlas-gene-888_transcribed;color=#1E90FF;Name=yetM;Parent=BSGatlas-transcript-792;comment="putative flavin-dependenthydroxylase/monooxygenase acting on salicylatederivatives";ec="1.14.13.-";go="GO:0008152 metabolic process,GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="yetM";derives_from=BSGatlas-gene-888 basu168 BSGatlas transcript 791462 792589 . - . ID=BSGatlas-transcript-793;color=#B37924;Parent=BSGatlas-gene-889;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 791462 792532 . - . ID=BSGatlas-gene-889;color=#3474B3;Name=yetN;locus_tag=BSU_07240,BSU07240 basu168 BSGatlas CDS 791462 792532 . - 0 ID=BSGatlas-gene-889_transcribed;color=#3474B3;Name=yetN;Parent=BSGatlas-transcript-793;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yetN";derives_from=BSGatlas-gene-889 basu168 BSGatlas UTR 792533 792589 . - . ID=BSGatlas-5'UTR-471;Parent=BSGatlas-transcript-793;comment="5'UTR" basu168 BSGatlas transcript 792642 795867 . + . ID=BSGatlas-transcript-794;color=#FF9900;Parent=BSGatlas-gene-890;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 792642 792681 . + . ID=BSGatlas-5'UTR-472;Parent=BSGatlas-transcript-794;comment="5'UTR" basu168 BSGatlas gene 792682 795867 . + . ID=BSGatlas-gene-890;color=#1E90FF;Name=yetO;locus_tag=BSU_07250,BSU07250 basu168 BSGatlas CDS 792682 795867 . + 0 ID=BSGatlas-gene-890_transcribed;color=#1E90FF;Name=yetO;Parent=BSGatlas-transcript-794;comment="bifunctional P-450/NADPH-P450 reductase 1";ec="1.6.2.4,1.6.2.4;1.14.14.1,EC-1.14.14.1";go="GO:0003824 catalytic activity,GO:0003958 NADPH-hemoprotein reductase activity,GO:0004497 monooxygenase activity,GO:0005506 iron ion binding,GO:0005737 cytoplasm,GO:0008152 metabolic process,GO:0010181 FMN binding,GO:0016491 oxidoreductase activity,GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen,GO:0020037 heme binding,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process,GO:0070330 aromatase activity";kegg_pathways="Aminobenzoate degradation (ko00627),Fatty acid degradation (ko00071),Microbial metabolism in diverse environments (ko01120),Tryptophan metabolism (ko00380)";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.3 Electron transport/ other,SW 2.4 Lipid metabolism,SW 2.4.3 Lipid metabolism/ other,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="yetO,yfnJ";derives_from=BSGatlas-gene-890 basu168 BSGatlas transcript 795959 798294 . + . ID=BSGatlas-transcript-4946;color=#FF9900;Parent=BSGatlas-gene-893;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 795959 796313 . + . ID=BSGatlas-5'UTR-2845;Parent=BSGatlas-transcript-4946;comment="5'UTR" basu168 BSGatlas transcript 796008 798294 . + . ID=BSGatlas-transcript-4947;color=#FF9900;Parent=BSGatlas-gene-893;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 796008 796313 . + . ID=BSGatlas-5'UTR-2846;Parent=BSGatlas-transcript-4947;comment="5'UTR" basu168 BSGatlas gene 796130 796224 . + . ID=BSGatlas-gene-892;color=#999999;Name=TERMseq-predicted-riboswitch basu168 BSGatlas riboswitch 796130 796224 . + . ID=BSGatlas-gene-892_transcribed;color=#999999;Name=TERMseq-predicted-riboswitch;derives_from=BSGatlas-gene-892 basu168 BSGatlas gene 796314 798233 . + . ID=BSGatlas-gene-893;color=#1E90FF;Name=yfnI;locus_tag=BSU_07260,BSU07260 basu168 BSGatlas CDS 796314 798233 . + 0 ID=BSGatlas-gene-893_transcribed;color=#1E90FF;Name=yfnI;Parent=BSGatlas-transcript-4946,BSGatlas-transcript-4947;comment="exported glycerol phosphate lipoteichoic acidsynthetase and anion-binding protein";go="GO:0003824 catalytic activity,GO:0005576 extracellular region,GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0008484 sulfuric ester hydrolase activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016740 transferase activity,GO:0046872 metal ion binding,GO:0070395 lipoteichoic acid biosynthetic process";kegg_pathways="Glycerolipid metabolism (ko00561),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.3 Biosynthesis of lipoteichoic acid,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.2 Biosynthesis of lipoteichoic acid,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.2 Cell envelope stress proteins (controlled by SigM, V, W, X, Y),SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.4 Phosphoproteins,SW 6.4.8 Phosphorylation on either a Ser, Thr or Tyr residue";synonyms="yetP,yfnI";derives_from=BSGatlas-gene-893 basu168 BSGatlas UTR 798234 798294 . + . ID=BSGatlas-3'UTR-277;Parent=BSGatlas-transcript-4946,BSGatlas-transcript-4947;comment="3'UTR" basu168 BSGatlas transcript 798360 803326 . + . ID=BSGatlas-transcript-799;color=#FF9900;Parent=BSGatlas-gene-894,BSGatlas-gene-895,BSGatlas-gene-896,BSGatlas-gene-897,BSGatlas-gene-898;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 798360 803286 . + . ID=BSGatlas-transcript-798;color=#FF9900;Parent=BSGatlas-gene-894,BSGatlas-gene-895,BSGatlas-gene-896,BSGatlas-gene-897,BSGatlas-gene-898;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 798360 798468 . + . ID=BSGatlas-5'UTR-475;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799;comment="5'UTR" basu168 BSGatlas gene 798469 799233 . + . ID=BSGatlas-gene-894;color=#1E90FF;Name=yfnH;locus_tag=BSU_07270,BSU07270 basu168 BSGatlas CDS 798469 799233 . + 0 ID=BSGatlas-gene-894_transcribed;color=#1E90FF;Name=yfnH;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799;comment="glucose-1-phosphate cytidylyltransferase(sporulation)";ec="2.7.7.33,EC-2.7.7.33";go="GO:0000166 nucleotide binding,GO:0009058 biosynthetic process,GO:0016740 transferase activity,GO:0016779 nucleotidyltransferase activity,GO:0046872 metal ion binding,GO:0047343 glucose-1-phosphate cytidylyltransferase activity";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Metabolic pathways (ko01100),O-Antigen nucleotide sugar biosynthesis (ko00541),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yfnH";derives_from=BSGatlas-gene-894 basu168 BSGatlas gene 799240 800208 . + . ID=BSGatlas-gene-895;color=#1E90FF;Name=yfnG;locus_tag=BSU_07280,BSU07280 basu168 BSGatlas CDS 799240 800208 . + 0 ID=BSGatlas-gene-895_transcribed;color=#1E90FF;Name=yfnG;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799;comment="putative CDP-sugar-dehydratase/epimerase";ec="EC-4.2.1.45";go="GO:0003824 catalytic activity,GO:0005975 carbohydrate metabolic process,GO:0044237 cellular metabolic process,GO:0050662 coenzyme binding";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yfnG";derives_from=BSGatlas-gene-895 basu168 BSGatlas UTR 800209 800231 . + . ID=BSGatlas-internal_UTR-228;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799;comment="internal_UTR" basu168 BSGatlas gene 800232 801143 . + . ID=BSGatlas-gene-896;color=#1E90FF;Name=yfnF;locus_tag=BSU_07290,BSU07290 basu168 BSGatlas CDS 800232 801143 . + 0 ID=BSGatlas-gene-896_transcribed;color=#1E90FF;Name=yfnF;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799;comment="putative glycosyltransferase";ec="2.4.1.-";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="yfnF";derives_from=BSGatlas-gene-896 basu168 BSGatlas transcript 801046 803326 . + . ID=BSGatlas-transcript-801;color=#FF9900;Parent=BSGatlas-gene-897,BSGatlas-gene-898;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 801046 803286 . + . ID=BSGatlas-transcript-800;color=#FF9900;Parent=BSGatlas-gene-897,BSGatlas-gene-898;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 801046 801171 . + . ID=BSGatlas-5'UTR-476;Parent=BSGatlas-transcript-800,BSGatlas-transcript-801;comment="5'UTR" basu168 BSGatlas UTR 801144 801171 . + . ID=BSGatlas-internal_UTR-229;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799;comment="internal_UTR" basu168 BSGatlas transcript 801172 803326 . + . ID=BSGatlas-transcript-803;color=#FF9900;Parent=BSGatlas-gene-897,BSGatlas-gene-898;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 801172 803286 . + . ID=BSGatlas-transcript-802;color=#FF9900;Parent=BSGatlas-gene-897,BSGatlas-gene-898;comment="Based on: SubtiWiki" basu168 BSGatlas gene 801172 802350 . + . ID=BSGatlas-gene-897;color=#1E90FF;Name=yfnE;locus_tag=BSU_07300,BSU07300 basu168 BSGatlas CDS 801172 802350 . + 0 ID=BSGatlas-gene-897_transcribed;color=#1E90FF;Name=yfnE;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799,BSGatlas-transcript-800,BSGatlas-transcript-801,BSGatlas-transcript-802,BSGatlas-transcript-803;comment="putative glycosyltransferase (complexcarbohydrate synthase)";ec="2.4.1.-";go="GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016757 transferase activity, transferring glycosyl groups";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="yfnE";derives_from=BSGatlas-gene-897 basu168 BSGatlas transcript 802351 803326 . + . ID=BSGatlas-transcript-4949;color=#FF9900;Parent=BSGatlas-gene-898;comment="Based on: SubtiWiki" basu168 BSGatlas gene 802351 803286 . + . ID=BSGatlas-gene-898;color=#1E90FF;Name=yfnD;locus_tag=BSU_07310,BSU07310 basu168 BSGatlas transcript 802351 803286 . + . ID=BSGatlas-transcript-4948;color=#FF9900;Parent=BSGatlas-gene-898;comment="Based on: SubtiWiki" basu168 BSGatlas CDS 802351 803286 . + 0 ID=BSGatlas-gene-898_transcribed;color=#1E90FF;Name=yfnD;Parent=BSGatlas-transcript-798,BSGatlas-transcript-799,BSGatlas-transcript-800,BSGatlas-transcript-801,BSGatlas-transcript-802,BSGatlas-transcript-803,BSGatlas-transcript-4948,BSGatlas-transcript-4949;comment="putative glycosyltransferase (complexcarbohydrate synthase)";ec="2.4.1.-";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="yfnD";derives_from=BSGatlas-gene-898 basu168 BSGatlas transcript 803276 804593 . - . ID=BSGatlas-transcript-806;color=#B37924;Parent=BSGatlas-gene-899;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 803276 803316 . - . ID=BSGatlas-3'UTR-278;Parent=BSGatlas-transcript-806;comment="3'UTR" basu168 BSGatlas UTR 803287 803326 . + . ID=BSGatlas-3'UTR-279;Parent=BSGatlas-transcript-799,BSGatlas-transcript-801,BSGatlas-transcript-803,BSGatlas-transcript-4949;comment="3'UTR" basu168 BSGatlas gene 803317 804546 . - . ID=BSGatlas-gene-899;color=#3474B3;Name=yfnC;locus_tag=BSU_07320,BSU07320 basu168 BSGatlas CDS 803317 804546 . - 0 ID=BSGatlas-gene-899_transcribed;color=#3474B3;Name=yfnC;Parent=BSGatlas-transcript-806;comment="putative efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfnC";derives_from=BSGatlas-gene-899 basu168 BSGatlas UTR 804547 804593 . - . ID=BSGatlas-5'UTR-478;Parent=BSGatlas-transcript-806;comment="5'UTR" basu168 BSGatlas transcript 804628 807898 . - . ID=BSGatlas-transcript-809;color=#B37924;Parent=BSGatlas-gene-901,BSGatlas-gene-900;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 804628 806907 . - . ID=BSGatlas-transcript-808;color=#B37924;Parent=BSGatlas-gene-901,BSGatlas-gene-900;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 804628 805410 . - . ID=BSGatlas-transcript-807;color=#B37924;Parent=BSGatlas-gene-900;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 804628 804656 . - . ID=BSGatlas-3'UTR-280;Parent=BSGatlas-transcript-807,BSGatlas-transcript-808,BSGatlas-transcript-809;comment="3'UTR" basu168 BSGatlas gene 804657 805364 . - . ID=BSGatlas-gene-900;color=#3474B3;Name=yfnB;locus_tag=BSU_07330,BSU07330 basu168 BSGatlas CDS 804657 805364 . - 0 ID=BSGatlas-gene-900_transcribed;color=#3474B3;Name=yfnB;Parent=BSGatlas-transcript-807,BSGatlas-transcript-808,BSGatlas-transcript-809;comment="pyrimidine nucleotide phosphatase (promiscuous)";ec="3.1.3.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";kegg_pathways="Chloroalkane and chloroalkene degradation (ko00625),Chlorocyclohexane and chlorobenzene degradation (ko00361),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120)";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yfnB";derives_from=BSGatlas-gene-900 basu168 BSGatlas UTR 805365 805455 . - . ID=BSGatlas-internal_UTR-230;Parent=BSGatlas-transcript-808,BSGatlas-transcript-809;comment="internal_UTR" basu168 BSGatlas UTR 805365 805410 . - . ID=BSGatlas-5'UTR-479;Parent=BSGatlas-transcript-807;comment="5'UTR" basu168 BSGatlas transcript 805407 807898 . - . ID=BSGatlas-transcript-811;color=#B37924;Parent=BSGatlas-gene-901;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 805407 806907 . - . ID=BSGatlas-transcript-810;color=#B37924;Parent=BSGatlas-gene-901;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 805407 805455 . - . ID=BSGatlas-3'UTR-281;Parent=BSGatlas-transcript-810,BSGatlas-transcript-811;comment="3'UTR" basu168 BSGatlas transcript 805456 807898 . - . ID=BSGatlas-transcript-813;color=#B37924;Parent=BSGatlas-gene-901;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 805456 806907 . - . ID=BSGatlas-transcript-812;color=#B37924;Parent=BSGatlas-gene-901;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 805456 806841 . - . ID=BSGatlas-gene-901;color=#3474B3;Name=mtrA;locus_tag=BSU_07340,BSU07340 basu168 BSGatlas CDS 805456 806841 . - 0 ID=BSGatlas-gene-901_transcribed;color=#3474B3;Name=mtrA;Parent=BSGatlas-transcript-808,BSGatlas-transcript-809,BSGatlas-transcript-810,BSGatlas-transcript-811,BSGatlas-transcript-812,BSGatlas-transcript-813;comment="methylthioribose permease";go="GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0015171 amino acid transmembrane transporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.4 Sulfur metabolism,SW 2.6.4.2 sulfur metabolism/ general,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="mtrA,yfnA";derives_from=BSGatlas-gene-901 basu168 BSGatlas UTR 806842 807898 . - . ID=BSGatlas-5'UTR-481;Parent=BSGatlas-transcript-809,BSGatlas-transcript-811,BSGatlas-transcript-813;comment="5'UTR" basu168 BSGatlas UTR 806842 806907 . - . ID=BSGatlas-5'UTR-480;Parent=BSGatlas-transcript-808,BSGatlas-transcript-810,BSGatlas-transcript-812;comment="5'UTR" basu168 BSGatlas transcript 807024 809463 . + . ID=BSGatlas-transcript-814;color=#FF9900;Parent=BSGatlas-gene-902,BSGatlas-gene-903;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 807024 807090 . + . ID=BSGatlas-5'UTR-482;Parent=BSGatlas-transcript-814;comment="5'UTR" basu168 BSGatlas gene 807091 808548 . + . ID=BSGatlas-gene-902;color=#1E90FF;Name=yfmT;locus_tag=BSU_07350,BSU07350 basu168 BSGatlas CDS 807091 808548 . + 0 ID=BSGatlas-gene-902_transcribed;color=#1E90FF;Name=yfmT;Parent=BSGatlas-transcript-814;comment="vanillin dehydrogenase";ec="1.2.1.67";go="GO:0004029 aldehyde dehydrogenase (NAD) activity,GO:0016491 oxidoreductase activity,GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor,GO:0055114 oxidation-reduction process";kegg_pathways="Aminobenzoate degradation (ko00627),Microbial metabolism in diverse environments (ko01120)";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yfmT";derives_from=BSGatlas-gene-902 basu168 BSGatlas gene 808562 809422 . + . ID=BSGatlas-gene-903;color=#1E90FF;Name=yfmS;locus_tag=BSU_07360,BSU07360 basu168 BSGatlas CDS 808562 809422 . + 0 ID=BSGatlas-gene-903_transcribed;color=#1E90FF;Name=yfmS;Parent=BSGatlas-transcript-814;comment="chemotaxis sensory transducer (sensed targetunknown)";go="GO:0004871 NA,GO:0007165 signal transduction,GO:0016020 membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.1 Exponential and early post-exponential lifestyles,SW 4.1.1 Motility and chemotaxis,SW 4.1.1.1 Signal transduction in motility and chemotaxis,SW 4.1.1.1.3 Soluble chemoreceptors";synonyms="yfmS";derives_from=BSGatlas-gene-903 basu168 BSGatlas UTR 809423 809463 . + . ID=BSGatlas-3'UTR-282;Parent=BSGatlas-transcript-814;comment="3'UTR" basu168 BSGatlas transcript 809516 811486 . + . ID=BSGatlas-transcript-815;color=#FF9900;Parent=BSGatlas-gene-904;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 809516 809556 . + . ID=BSGatlas-5'UTR-483;Parent=BSGatlas-transcript-815;comment="5'UTR" basu168 BSGatlas gene 809557 811446 . + . ID=BSGatlas-gene-904;color=#1E90FF;Name=yfmR;locus_tag=BSU_07370,BSU07370 basu168 BSGatlas CDS 809557 811446 . + 0 ID=BSGatlas-gene-904_transcribed;color=#1E90FF;Name=yfmR;Parent=BSGatlas-transcript-815;comment="putative energy-dependent translational throttleA";ec="3.6.3.-";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters";synonyms="yfmR";derives_from=BSGatlas-gene-904 basu168 BSGatlas UTR 811447 811486 . + . ID=BSGatlas-3'UTR-283;Parent=BSGatlas-transcript-815;comment="3'UTR" basu168 BSGatlas transcript 811518 812068 . + . ID=BSGatlas-transcript-817;color=#FF9900;Parent=BSGatlas-gene-905;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 811518 812015 . + . ID=BSGatlas-transcript-816;color=#FF9900;Parent=BSGatlas-gene-905;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 811518 811568 . + . ID=BSGatlas-5'UTR-484;Parent=BSGatlas-transcript-816,BSGatlas-transcript-817;comment="5'UTR" basu168 BSGatlas gene 811569 812015 . + . ID=BSGatlas-gene-905;color=#1E90FF;Name=yfmQ;locus_tag=BSU_07380,BSU07380 basu168 BSGatlas CDS 811569 812015 . + 0 ID=BSGatlas-gene-905_transcribed;color=#1E90FF;Name=yfmQ;Parent=BSGatlas-transcript-816,BSGatlas-transcript-817;comment="conserved hypothetical protein";go="GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yfmQ";derives_from=BSGatlas-gene-905 basu168 BSGatlas UTR 812016 812068 . + . ID=BSGatlas-3'UTR-284;Parent=BSGatlas-transcript-817;comment="3'UTR" basu168 BSGatlas transcript 812116 813863 . + . ID=BSGatlas-transcript-820;color=#FF9900;Parent=BSGatlas-gene-906,BSGatlas-gene-907;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 812116 812606 . + . ID=BSGatlas-transcript-819;color=#FF9900;Parent=BSGatlas-gene-906;comment="Based on: BSGatlas" basu168 BSGatlas transcript 812116 812562 . + . ID=BSGatlas-transcript-818;color=#FF9900;Parent=BSGatlas-gene-906;comment="Based on: BSGatlas" basu168 BSGatlas UTR 812116 812139 . + . ID=BSGatlas-5'UTR-485;Parent=BSGatlas-transcript-818,BSGatlas-transcript-819,BSGatlas-transcript-820;comment="5'UTR" basu168 BSGatlas gene 812140 812562 . + . ID=BSGatlas-gene-906;color=#1E90FF;Name=yfmP;locus_tag=BSU_07390,BSU07390 basu168 BSGatlas CDS 812140 812562 . + 0 ID=BSGatlas-gene-906_transcribed;color=#1E90FF;Name=yfmP;Parent=BSGatlas-transcript-818,BSGatlas-transcript-819,BSGatlas-transcript-820;comment="transcriptional regulator (MerR family) of metal(copper) efflux transporter expression";go="GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity";synonyms="yfmP";derives_from=BSGatlas-gene-906 basu168 BSGatlas UTR 812563 812627 . + . ID=BSGatlas-internal_UTR-231;Parent=BSGatlas-transcript-820;comment="internal_UTR" basu168 BSGatlas UTR 812563 812606 . + . ID=BSGatlas-3'UTR-285;Parent=BSGatlas-transcript-819;comment="3'UTR" basu168 BSGatlas gene 812628 813818 . + . ID=BSGatlas-gene-907;color=#1E90FF;Name=yfmO;locus_tag=BSU_07400,BSU07400 basu168 BSGatlas CDS 812628 813818 . + 0 ID=BSGatlas-gene-907_transcribed;color=#1E90FF;Name=yfmO;Parent=BSGatlas-transcript-820;comment="metal (copper) efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006825 copper ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfmO";derives_from=BSGatlas-gene-907 basu168 BSGatlas UTR 813819 813863 . + . ID=BSGatlas-3'UTR-286;Parent=BSGatlas-transcript-820;comment="3'UTR" basu168 BSGatlas gene 814109 814264 . + . ID=BSGatlas-gene-908;color=#1E90FF;Name=yfmN;locus_tag=BSU_07410,BSU07410 basu168 BSGatlas CDS 814109 814264 . + 0 ID=BSGatlas-gene-908_transcribed;color=#1E90FF;Name=yfmN;comment="hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfmN";derives_from=BSGatlas-gene-908 basu168 BSGatlas transcript 814337 815994 . - . ID=BSGatlas-transcript-822;color=#B37924;Parent=BSGatlas-gene-909;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 814337 814383 . - . ID=BSGatlas-3'UTR-288;Parent=BSGatlas-transcript-822;comment="3'UTR" basu168 BSGatlas transcript 814384 815994 . - . ID=BSGatlas-transcript-823;color=#B37924;Parent=BSGatlas-gene-909;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 814384 815940 . - . ID=BSGatlas-gene-909;color=#3474B3;Name=yfmM;locus_tag=BSU_07420,BSU07420 basu168 BSGatlas CDS 814384 815940 . - 0 ID=BSGatlas-gene-909_transcribed;color=#3474B3;Name=yfmM;Parent=BSGatlas-transcript-822,BSGatlas-transcript-823;comment="putative energy-sensing inhibitor oftranslation";ec="3.6.3.-";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.4 Unknown ABC transporters";synonyms="yfmM";derives_from=BSGatlas-gene-909 basu168 BSGatlas transcript 815808 817277 . + . ID=BSGatlas-transcript-824;color=#FF9900;Parent=BSGatlas-gene-910;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 815808 816112 . + . ID=BSGatlas-5'UTR-486;Parent=BSGatlas-transcript-824;comment="5'UTR" basu168 BSGatlas UTR 815941 815994 . - . ID=BSGatlas-5'UTR-487;Parent=BSGatlas-transcript-822,BSGatlas-transcript-823;comment="5'UTR" basu168 BSGatlas transcript 816072 817277 . + . ID=BSGatlas-transcript-825;color=#FF9900;Parent=BSGatlas-gene-910;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 816072 816112 . + . ID=BSGatlas-5'UTR-488;Parent=BSGatlas-transcript-825;comment="5'UTR" basu168 BSGatlas gene 816113 817243 . + . ID=BSGatlas-gene-910;color=#1E90FF;Name=yfmL;locus_tag=BSU_07430,BSU07430 basu168 BSGatlas CDS 816113 817243 . + 0 ID=BSGatlas-gene-910_transcribed;color=#1E90FF;Name=yfmL;Parent=BSGatlas-transcript-824,BSGatlas-transcript-825;comment="putative ATP-dependent RNA helicase";ec="3.6.1.-";go="GO:0000166 nucleotide binding,GO:0003676 nucleic acid binding,GO:0003723 RNA binding,GO:0004386 helicase activity,GO:0005524 ATP binding,GO:0008026 ATP-dependent helicase activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 3 Information processing,SW 3.2 RNA synthesis and degradation,SW 3.2.3 DEAD-box RNA helicases,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.6 Ribosome assembly";synonyms="yfmL";derives_from=BSGatlas-gene-910 basu168 BSGatlas UTR 817244 817277 . + . ID=BSGatlas-3'UTR-289;Parent=BSGatlas-transcript-824,BSGatlas-transcript-825;comment="3'UTR" basu168 BSGatlas transcript 817311 817811 . + . ID=BSGatlas-transcript-826;color=#FF9900;Parent=BSGatlas-gene-911;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 817311 817757 . + . ID=BSGatlas-gene-911;color=#1E90FF;Name=yfmK;locus_tag=BSU_07440,BSU07440 basu168 BSGatlas CDS 817311 817757 . + 0 ID=BSGatlas-gene-911_transcribed;color=#1E90FF;Name=yfmK;Parent=BSGatlas-transcript-826;comment="putative acetyltransferase";ec="2.3.1.-";go="GO:0008080 N-acetyltransferase activity,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.5 Protein acetylases/ deacetylases";synonyms="yfmK";derives_from=BSGatlas-gene-911 basu168 BSGatlas UTR 817758 817811 . + . ID=BSGatlas-3'UTR-290;Parent=BSGatlas-transcript-826;comment="3'UTR" basu168 BSGatlas transcript 817761 820575 . - . ID=BSGatlas-transcript-828;color=#B37924;Parent=BSGatlas-gene-914,BSGatlas-gene-912;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 817761 818854 . - . ID=BSGatlas-transcript-827;color=#B37924;Parent=BSGatlas-gene-912;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 817761 817809 . - . ID=BSGatlas-3'UTR-291;Parent=BSGatlas-transcript-827,BSGatlas-transcript-828;comment="3'UTR" basu168 BSGatlas gene 817810 818829 . - . ID=BSGatlas-gene-912;color=#3474B3;Name=yfmJ;locus_tag=BSU_07450,BSU07450 basu168 BSGatlas CDS 817810 818829 . - 0 ID=BSGatlas-gene-912_transcribed;color=#3474B3;Name=yfmJ;Parent=BSGatlas-transcript-827,BSGatlas-transcript-828;comment="putative oxidoreductase";ec="1.-.-.-";go="GO:0008270 zinc ion binding,GO:0009636 response to toxic substance,GO:0016491 oxidoreductase activity,GO:0019439 aromatic compound catabolic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yfmJ";derives_from=BSGatlas-gene-912 basu168 BSGatlas UTR 818830 819310 . - . ID=BSGatlas-internal_UTR-232;Parent=BSGatlas-transcript-828;comment="internal_UTR" basu168 BSGatlas UTR 818830 818854 . - . ID=BSGatlas-5'UTR-489;Parent=BSGatlas-transcript-827;comment="5'UTR" basu168 BSGatlas gene 818976 820073 . + . ID=BSGatlas-gene-913;color=#CC0000;Name=S253;locus_tag=new_818976_820073 basu168 BSGatlas transcript 818976 820073 . + . ID=BSGatlas-transcript-829;color=#FF9900;Parent=BSGatlas-gene-913;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 818976 820073 . + . ID=BSGatlas-gene-913_transcribed;color=#CC0000;Name=S253;Parent=BSGatlas-transcript-829;synonyms="S253";derives_from=BSGatlas-gene-913 basu168 BSGatlas gene 819311 820531 . - . ID=BSGatlas-gene-914;color=#3474B3;Name=yfmI;locus_tag=BSU_07460,BSU07460 basu168 BSGatlas CDS 819311 820531 . - 0 ID=BSGatlas-gene-914_transcribed;color=#3474B3;Name=yfmI;Parent=BSGatlas-transcript-828;comment="putative efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfmI";derives_from=BSGatlas-gene-914 basu168 BSGatlas UTR 820532 820575 . - . ID=BSGatlas-5'UTR-490;Parent=BSGatlas-transcript-828;comment="5'UTR" basu168 BSGatlas transcript 820648 822433 . + . ID=BSGatlas-transcript-4950;color=#FF9900;Parent=BSGatlas-gene-915,BSGatlas-gene-916;comment="Based on: SubtiWiki" basu168 BSGatlas gene 820648 820823 . + . ID=BSGatlas-gene-915;color=#CC0000;Name=yfmH;locus_tag=new_820648_820823 basu168 BSGatlas transcript 820648 820823 . + . ID=BSGatlas-transcript-830;color=#FF9900;Parent=BSGatlas-gene-915;comment="Based on: DBTBS" basu168 BSGatlas ncRNA 820648 820823 . + . ID=BSGatlas-gene-915_transcribed;color=#CC0000;Name=yfmH;Parent=BSGatlas-transcript-830,BSGatlas-transcript-4950;synonyms="S254,yfmH";derives_from=BSGatlas-gene-915 basu168 BSGatlas UTR 820824 820866 . + . ID=BSGatlas-internal_UTR-1128;Parent=BSGatlas-transcript-4950;comment="internal_UTR" basu168 BSGatlas transcript 820867 822433 . + . ID=BSGatlas-transcript-831;color=#FF9900;Parent=BSGatlas-gene-916;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas gene 820867 822330 . + . ID=BSGatlas-gene-916;color=#1E90FF;Name=yfmG;locus_tag=BSU_07480,BSU07480 basu168 BSGatlas CDS 820867 822330 . + 0 ID=BSGatlas-gene-916_transcribed;color=#1E90FF;Name=yfmG;Parent=BSGatlas-transcript-4950,BSGatlas-transcript-831;comment="putative enzyme";subtiwiki_category="SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.1 Phosphorylation on an Arg residue,SW 6.7 Proteins of unknown function";synonyms="yfmG";derives_from=BSGatlas-gene-916 basu168 BSGatlas UTR 822331 822433 . + . ID=BSGatlas-3'UTR-293;Parent=BSGatlas-transcript-4950,BSGatlas-transcript-831;comment="3'UTR" basu168 BSGatlas transcript 822903 826783 . - . ID=BSGatlas-transcript-4951;color=#B37924;Parent=BSGatlas-gene-920,BSGatlas-gene-919,BSGatlas-gene-918,BSGatlas-gene-917;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 822903 823703 . - . ID=BSGatlas-gene-917;color=#3474B3;Name=fecF;locus_tag=BSU_07490,BSU07490 basu168 BSGatlas CDS 822903 823703 . - 0 ID=BSGatlas-gene-917_transcribed;color=#3474B3;Name=fecF;Parent=BSGatlas-transcript-4951;comment="iron-dicitrate ABC transporter (ATP-bindingprotein)";ec="3.6.3.-";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016787 hydrolase activity,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity,GO:0055072 iron ion homeostasis";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="fecF,yfmF";derives_from=BSGatlas-gene-917 basu168 BSGatlas gene 823716 824717 . - . ID=BSGatlas-gene-918;color=#3474B3;Name=fecE;locus_tag=BSU_07500,BSU07500 basu168 BSGatlas CDS 823716 824717 . - 0 ID=BSGatlas-gene-918_transcribed;color=#3474B3;Name=fecE;Parent=BSGatlas-transcript-4951;comment="iron-dicitrate ABC transporter (permease)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055072 iron ion homeostasis";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="fecE,yfmE";derives_from=BSGatlas-gene-918 basu168 BSGatlas gene 824714 825715 . - . ID=BSGatlas-gene-919;color=#3474B3;Name=fecD;locus_tag=BSU_07510,BSU07510 basu168 BSGatlas CDS 824714 825715 . - 0 ID=BSGatlas-gene-919_transcribed;color=#3474B3;Name=fecD;Parent=BSGatlas-transcript-4951;comment="iron-dicitrate ABC transporter (permease)";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055072 iron ion homeostasis";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="fecD,yfmD";derives_from=BSGatlas-gene-919 basu168 BSGatlas UTR 825716 825806 . - . ID=BSGatlas-5'UTR-492;comment="5'UTR" basu168 BSGatlas UTR 825716 825786 . - . ID=BSGatlas-internal_UTR-233;Parent=BSGatlas-transcript-4951;comment="internal_UTR" basu168 BSGatlas transcript 825743 827324 . - . ID=BSGatlas-transcript-837;color=#B37924;Parent=BSGatlas-gene-921,BSGatlas-gene-920;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 825743 826783 . - . ID=BSGatlas-transcript-836;color=#B37924;Parent=BSGatlas-gene-920;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 825743 825786 . - . ID=BSGatlas-3'UTR-294;Parent=BSGatlas-transcript-836,BSGatlas-transcript-837;comment="3'UTR" basu168 BSGatlas transcript 825787 827324 . - . ID=BSGatlas-transcript-839;color=#B37924;Parent=BSGatlas-gene-921,BSGatlas-gene-920;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 825787 826783 . - . ID=BSGatlas-transcript-838;color=#B37924;Parent=BSGatlas-gene-920;comment="Based on: SubtiWiki" basu168 BSGatlas gene 825787 826734 . - . ID=BSGatlas-gene-920;color=#3474B3;Name=fecC;locus_tag=BSU_07520,BSU07520 basu168 BSGatlas CDS 825787 826734 . - 0 ID=BSGatlas-gene-920_transcribed;color=#3474B3;Name=fecC;Parent=BSGatlas-transcript-4951,BSGatlas-transcript-836,BSGatlas-transcript-837,BSGatlas-transcript-838,BSGatlas-transcript-839;comment="iron-dicitrate ABC transporter (bindinglipoprotein)";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0016020 membrane,GO:0055072 iron ion homeostasis";kegg_pathways="ABC transporters (ko02010)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.1 Importers,SW 1.2.1.1.5 Uptake of iron/ siderophores,SW 1.3 Homeostasis,SW 1.3.3 Acquisition of iron,SW 1.3.3.1 ABC transporters for the uptake of iron/ siderophores,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.5 Iron metabolism,SW 2.6.5.4 ABC transporters for the uptake of iron/ siderophores,SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.2 Membrane proteins";synonyms="fecC,yfmC";derives_from=BSGatlas-gene-920 basu168 BSGatlas transcript 826093 827850 . + . ID=BSGatlas-transcript-840;color=#FF9900;Parent=BSGatlas-gene-922,BSGatlas-gene-923;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 826093 827251 . + . ID=BSGatlas-5'UTR-493;Parent=BSGatlas-transcript-840;comment="5'UTR" basu168 BSGatlas transcript 826720 827850 . + . ID=BSGatlas-transcript-841;color=#FF9900;Parent=BSGatlas-gene-922,BSGatlas-gene-923;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 826720 827251 . + . ID=BSGatlas-5'UTR-494;Parent=BSGatlas-transcript-841;comment="5'UTR" basu168 BSGatlas UTR 826735 826842 . - . ID=BSGatlas-internal_UTR-234;Parent=BSGatlas-transcript-837,BSGatlas-transcript-839;comment="internal_UTR" basu168 BSGatlas UTR 826735 826783 . - . ID=BSGatlas-5'UTR-495;Parent=BSGatlas-transcript-4951,BSGatlas-transcript-836,BSGatlas-transcript-838;comment="5'UTR" basu168 BSGatlas gene 826843 827211 . - . ID=BSGatlas-gene-921;color=#3474B3;Name=yfmB;locus_tag=BSU_07530,BSU07530 basu168 BSGatlas CDS 826843 827211 . - 0 ID=BSGatlas-gene-921_transcribed;color=#3474B3;Name=yfmB;Parent=BSGatlas-transcript-837,BSGatlas-transcript-839;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfmB";derives_from=BSGatlas-gene-921 basu168 BSGatlas UTR 827212 827324 . - . ID=BSGatlas-5'UTR-496;Parent=BSGatlas-transcript-837,BSGatlas-transcript-839;comment="5'UTR" basu168 BSGatlas gene 827252 827419 . + . ID=BSGatlas-gene-922;color=#1E90FF;Name=yfmA;locus_tag=BSU_07540,BSU07540 basu168 BSGatlas CDS 827252 827419 . + 0 ID=BSGatlas-gene-922_transcribed;color=#1E90FF;Name=yfmA;Parent=BSGatlas-transcript-840,BSGatlas-transcript-841;subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="yfmA";derives_from=BSGatlas-gene-922 basu168 BSGatlas transcript 827412 827850 . + . ID=BSGatlas-transcript-842;color=#FF9900;Parent=BSGatlas-gene-923;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 827412 827454 . + . ID=BSGatlas-5'UTR-497;Parent=BSGatlas-transcript-842;comment="5'UTR" basu168 BSGatlas UTR 827420 827454 . + . ID=BSGatlas-internal_UTR-235;Parent=BSGatlas-transcript-840,BSGatlas-transcript-841;comment="internal_UTR" basu168 BSGatlas gene 827455 827802 . + . ID=BSGatlas-gene-923;color=#1E90FF;Name=yflT;locus_tag=BSU_07550,BSU07550 basu168 BSGatlas CDS 827455 827802 . + 0 ID=BSGatlas-gene-923_transcribed;color=#1E90FF;Name=yflT;Parent=BSGatlas-transcript-840,BSGatlas-transcript-841,BSGatlas-transcript-842;comment="heat stress induced protein";go="GO:0006950 response to stress";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="yflT";derives_from=BSGatlas-gene-923 basu168 BSGatlas UTR 827803 827850 . + . ID=BSGatlas-3'UTR-295;Parent=BSGatlas-transcript-840,BSGatlas-transcript-841,BSGatlas-transcript-842;comment="3'UTR" basu168 BSGatlas transcript 827925 829305 . + . ID=BSGatlas-transcript-843;color=#FF9900;Parent=BSGatlas-gene-924;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 827925 827992 . + . ID=BSGatlas-5'UTR-498;Parent=BSGatlas-transcript-843;comment="5'UTR" basu168 BSGatlas gene 827993 829255 . + . ID=BSGatlas-gene-924;color=#1E90FF;Name=pel;locus_tag=BSU_07560,BSU07560 basu168 BSGatlas CDS 827993 829255 . + 0 ID=BSGatlas-gene-924_transcribed;color=#1E90FF;Name=pel;Parent=BSGatlas-transcript-843;comment="pectate lyase";ec="4.2.2.2,EC-4.2.2.2";go="GO:0005509 calcium ion binding,GO:0005576 extracellular region,GO:0016829 lyase activity,GO:0030570 pectate lyase activity,GO:0045490 pectin catabolic process,GO:0046872 metal ion binding";kegg_pathways="Metabolic pathways (ko01100),Pentose and glucuronate interconversions (ko00040),Quorum sensing (ko02024)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.27 Utilization of other polymeric carbohydrates,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="pel";derives_from=BSGatlas-gene-924 basu168 BSGatlas UTR 829256 829305 . + . ID=BSGatlas-3'UTR-296;Parent=BSGatlas-transcript-843;comment="3'UTR" basu168 BSGatlas transcript 829334 830859 . + . ID=BSGatlas-transcript-844;color=#FF9900;Parent=BSGatlas-gene-925;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 829334 829381 . + . ID=BSGatlas-5'UTR-499;Parent=BSGatlas-transcript-844;comment="5'UTR" basu168 BSGatlas gene 829382 830818 . + . ID=BSGatlas-gene-925;color=#1E90FF;Name=yflS;locus_tag=BSU_07570,BSU07570 basu168 BSGatlas CDS 829382 830818 . + 0 ID=BSGatlas-gene-925_transcribed;color=#1E90FF;Name=yflS;Parent=BSGatlas-transcript-844;comment="malate (2-oxoglutarate) transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0006814 sodium ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.4 Transporter for organic acids,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yflS";derives_from=BSGatlas-gene-925 basu168 BSGatlas UTR 830819 830859 . + . ID=BSGatlas-3'UTR-297;Parent=BSGatlas-transcript-844;comment="3'UTR" basu168 BSGatlas transcript 830920 834220 . + . ID=BSGatlas-transcript-846;color=#FF9900;Parent=BSGatlas-gene-926,BSGatlas-gene-927,BSGatlas-gene-928;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 830920 834187 . + . ID=BSGatlas-transcript-845;color=#FF9900;Parent=BSGatlas-gene-926,BSGatlas-gene-927,BSGatlas-gene-928;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 830920 830944 . + . ID=BSGatlas-5'UTR-500;Parent=BSGatlas-transcript-845,BSGatlas-transcript-846;comment="5'UTR" basu168 BSGatlas gene 830945 832573 . + . ID=BSGatlas-gene-926;color=#1E90FF;Name=citS;locus_tag=BSU_07580,BSU07580 basu168 BSGatlas CDS 830945 832573 . + 0 ID=BSGatlas-gene-926_transcribed;color=#1E90FF;Name=citS;Parent=BSGatlas-transcript-845,BSGatlas-transcript-846;comment="two-component sensor histidine kinase";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0004871 NA,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0007165 signal transduction,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0016772 transferase activity, transferring phosphorus-containing groups,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation,GO:0031975 envelope";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="citS,yflR";derives_from=BSGatlas-gene-926 basu168 BSGatlas gene 832545 833225 . + . ID=BSGatlas-gene-927;color=#1E90FF;Name=citT;locus_tag=BSU_07590,BSU07590 basu168 BSGatlas CDS 832545 833225 . + 0 ID=BSGatlas-gene-927_transcribed;color=#1E90FF;Name=citT;Parent=BSGatlas-transcript-845,BSGatlas-transcript-846;comment="two-component response regulator";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0001071 NA,GO:0003677 DNA binding,GO:0005737 cytoplasm,GO:0005829 cytosol,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0009605 response to external stimulus,GO:0035556 intracellular signal transduction";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="citT,yflQ";derives_from=BSGatlas-gene-927 basu168 BSGatlas gene 833228 834187 . + . ID=BSGatlas-gene-928;color=#1E90FF;Name=yflP;locus_tag=BSU_07600,BSU07600 basu168 BSGatlas CDS 833228 834187 . + 0 ID=BSGatlas-gene-928_transcribed;color=#1E90FF;Name=yflP;Parent=BSGatlas-transcript-845,BSGatlas-transcript-846;comment="putative tricarboxylate transporter component";go="GO:0030288 outer membrane-bounded periplasmic space";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yflP";derives_from=BSGatlas-gene-928 basu168 BSGatlas UTR 834188 834220 . + . ID=BSGatlas-3'UTR-298;Parent=BSGatlas-transcript-846;comment="3'UTR" basu168 BSGatlas transcript 834312 836568 . + . ID=BSGatlas-transcript-847;color=#FF9900;Parent=BSGatlas-gene-929,BSGatlas-gene-930;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 834312 834382 . + . ID=BSGatlas-5'UTR-501;Parent=BSGatlas-transcript-847;comment="5'UTR" basu168 BSGatlas gene 834383 835684 . + . ID=BSGatlas-gene-929;color=#1E90FF;Name=citM;locus_tag=BSU_07610,BSU07610 basu168 BSGatlas CDS 834383 835684 . + 0 ID=BSGatlas-gene-929_transcribed;color=#1E90FF;Name=citM;Parent=BSGatlas-transcript-847;comment="transporter of divalent metal ions/citratecomplexes";go="GO:0005886 plasma membrane,GO:0006101 citrate metabolic process,GO:0006810 transport,GO:0015137 citrate transmembrane transporter activity,GO:0015293 symporter activity,GO:0015746 citrate transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0035674 tricarboxylic acid transmembrane transport,GO:0055085 transmembrane transport";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.4 Transporter for organic acids,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.1 Magnesium uptake/ efflux,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.1 Utilization of organic acids,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="citM,yflO";derives_from=BSGatlas-gene-929 basu168 BSGatlas UTR 835685 835739 . + . ID=BSGatlas-internal_UTR-236;Parent=BSGatlas-transcript-847;comment="internal_UTR" basu168 BSGatlas transcript 835702 836568 . + . ID=BSGatlas-transcript-848;color=#FF9900;Parent=BSGatlas-gene-930;comment="Based on: BSGatlas" basu168 BSGatlas UTR 835702 835739 . + . ID=BSGatlas-5'UTR-502;Parent=BSGatlas-transcript-848;comment="5'UTR" basu168 BSGatlas gene 835740 836534 . + . ID=BSGatlas-gene-930;color=#1E90FF;Name=yflN;locus_tag=BSU_07620,BSU07620 basu168 BSGatlas CDS 835740 836534 . + 0 ID=BSGatlas-gene-930_transcribed;color=#1E90FF;Name=yflN;Parent=BSGatlas-transcript-847,BSGatlas-transcript-848;comment="putative metal-dependent hydrolase";ec="3.-.-.-";go="GO:0008152 metabolic process,GO:0016787 hydrolase activity";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="yflN";derives_from=BSGatlas-gene-930 basu168 BSGatlas UTR 836535 836568 . + . ID=BSGatlas-3'UTR-299;Parent=BSGatlas-transcript-847,BSGatlas-transcript-848;comment="3'UTR" basu168 BSGatlas transcript 836620 838787 . + . ID=BSGatlas-transcript-849;color=#FF9900;Parent=BSGatlas-gene-931,BSGatlas-gene-933;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 836620 836652 . + . ID=BSGatlas-5'UTR-503;Parent=BSGatlas-transcript-849;comment="5'UTR" basu168 BSGatlas gene 836653 837744 . + . ID=BSGatlas-gene-931;color=#1E90FF;Name=nos;locus_tag=BSU_07630,BSU07630 basu168 BSGatlas CDS 836653 837744 . + 0 ID=BSGatlas-gene-931_transcribed;color=#1E90FF;Name=nos;Parent=BSGatlas-transcript-849;comment="nitric-oxide synthase";ec="1.14.13.39";go="GO:0000302 response to reactive oxygen species,GO:0003958 NADPH-hemoprotein reductase activity,GO:0004517 nitric-oxide synthase activity,GO:0005575 cellular_component,GO:0006809 nitric oxide biosynthetic process,GO:0016491 oxidoreductase activity,GO:0020037 heme binding,GO:0034617 tetrahydrobiopterin binding,GO:0046872 metal ion binding,GO:0055114 oxidation-reduction process";kegg_pathways="Arginine and proline metabolism (ko00330),Arginine biosynthesis (ko00220),Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.6 Miscellaneous metabolic pathways,SW 2.6.6.1 Biosynthesis of antibacterial compounds,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.15 Biosynthesis of antibacterial compounds";synonyms="nos,yflM";derives_from=BSGatlas-gene-931 basu168 BSGatlas transcript 837418 838038 . - . ID=BSGatlas-transcript-850;color=#B37924;Parent=BSGatlas-gene-932;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 837418 837734 . - . ID=BSGatlas-3'UTR-300;Parent=BSGatlas-transcript-850;comment="3'UTR" basu168 BSGatlas gene 837735 838010 . - . ID=BSGatlas-gene-932;color=#3474B3;Name=yflL;locus_tag=BSU_07640,BSU07640 basu168 BSGatlas CDS 837735 838010 . - 0 ID=BSGatlas-gene-932_transcribed;color=#3474B3;Name=yflL;Parent=BSGatlas-transcript-850;comment="acylphosphatase";ec="3.6.1.7,EC-3.6.1.7";go="GO:0003998 acylphosphatase activity,GO:0008152 metabolic process,GO:0016787 hydrolase activity";kegg_pathways="Aminobenzoate degradation (ko00627),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Pyruvate metabolism (ko00620)";subtiwiki_category="SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yflL";derives_from=BSGatlas-gene-932 basu168 BSGatlas UTR 837745 838076 . + . ID=BSGatlas-internal_UTR-237;Parent=BSGatlas-transcript-849;comment="internal_UTR" basu168 BSGatlas UTR 838011 838038 . - . ID=BSGatlas-5'UTR-504;Parent=BSGatlas-transcript-850;comment="5'UTR" basu168 BSGatlas gene 838077 838742 . + . ID=BSGatlas-gene-933;color=#1E90FF;Name=yflK;locus_tag=BSU_07650,BSU07650 basu168 BSGatlas CDS 838077 838742 . + 0 ID=BSGatlas-gene-933_transcribed;color=#1E90FF;Name=yflK;Parent=BSGatlas-transcript-849;comment="putative sulfur carrier";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0030151 molybdenum ion binding,GO:0030170 pyridoxal phosphate binding";subtiwiki_category="SW 2 Metabolism,SW 2.7 Detoxification reactions";synonyms="yflK";derives_from=BSGatlas-gene-933 basu168 BSGatlas UTR 838743 838787 . + . ID=BSGatlas-3'UTR-301;Parent=BSGatlas-transcript-849;comment="3'UTR" basu168 BSGatlas transcript 838783 839051 . - . ID=BSGatlas-transcript-851;color=#B37924;Parent=BSGatlas-gene-934;comment="Based on: SubtiWiki" basu168 BSGatlas gene 838783 838920 . - . ID=BSGatlas-gene-934;color=#3474B3;Name=yflJ;locus_tag=BSU_07660,BSU07660 basu168 BSGatlas CDS 838783 838920 . - 0 ID=BSGatlas-gene-934_transcribed;color=#3474B3;Name=yflJ;Parent=BSGatlas-transcript-851;comment="conserved hypothetical protein";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.5 Newly identified sporulation proteins (based on transcription profiling)";synonyms="yflJ";derives_from=BSGatlas-gene-934 basu168 BSGatlas UTR 838921 839051 . - . ID=BSGatlas-5'UTR-505;Parent=BSGatlas-transcript-851;comment="5'UTR" basu168 BSGatlas gene 839062 840126 . + . ID=BSGatlas-gene-935;color=#CC0000;Name=S265;locus_tag=new_839062_840126 basu168 BSGatlas transcript 839062 840126 . + . ID=BSGatlas-transcript-852;color=#FF9900;Parent=BSGatlas-gene-935;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 839062 840126 . + . ID=BSGatlas-gene-935_transcribed;color=#CC0000;Name=S265;Parent=BSGatlas-transcript-852;synonyms="S265";derives_from=BSGatlas-gene-935 basu168 BSGatlas transcript 839077 841664 . - . ID=BSGatlas-transcript-854;color=#B37924;Parent=BSGatlas-gene-938,BSGatlas-gene-937,BSGatlas-gene-936;comment="Based on: SubtiWiki" basu168 BSGatlas transcript 839077 840515 . - . ID=BSGatlas-transcript-853;color=#B37924;Parent=BSGatlas-gene-938,BSGatlas-gene-937,BSGatlas-gene-936;comment="Based on: SubtiWiki" basu168 BSGatlas gene 839077 839232 . - . ID=BSGatlas-gene-936;color=#3474B3;Name=yflI;locus_tag=BSU_07670,BSU07670 basu168 BSGatlas CDS 839077 839232 . - 0 ID=BSGatlas-gene-936_transcribed;color=#3474B3;Name=yflI;Parent=BSGatlas-transcript-853,BSGatlas-transcript-854;comment="conserved membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yflI";derives_from=BSGatlas-gene-936 basu168 BSGatlas UTR 839233 839338 . - . ID=BSGatlas-internal_UTR-238;Parent=BSGatlas-transcript-853,BSGatlas-transcript-854;comment="internal_UTR" basu168 BSGatlas transcript 839296 841664 . - . ID=BSGatlas-transcript-856;color=#B37924;Parent=BSGatlas-gene-938,BSGatlas-gene-937;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas transcript 839296 840515 . - . ID=BSGatlas-transcript-855;color=#B37924;Parent=BSGatlas-gene-938,BSGatlas-gene-937;comment="Based on: BsubCyc,DBTBS" basu168 BSGatlas UTR 839296 839338 . - . ID=BSGatlas-3'UTR-302;Parent=BSGatlas-transcript-855,BSGatlas-transcript-856;comment="3'UTR" basu168 BSGatlas gene 839339 839653 . - . ID=BSGatlas-gene-937;color=#3474B3;Name=yflH;locus_tag=BSU_07680,BSU07680 basu168 BSGatlas CDS 839339 839653 . - 0 ID=BSGatlas-gene-937_transcribed;color=#3474B3;Name=yflH;Parent=BSGatlas-transcript-853,BSGatlas-transcript-854,BSGatlas-transcript-855,BSGatlas-transcript-856;comment="putative enzyme";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="yflH";derives_from=BSGatlas-gene-937 basu168 BSGatlas UTR 839654 839734 . - . ID=BSGatlas-internal_UTR-239;Parent=BSGatlas-transcript-853,BSGatlas-transcript-854,BSGatlas-transcript-855,BSGatlas-transcript-856;comment="internal_UTR" basu168 BSGatlas gene 839735 840484 . - . ID=BSGatlas-gene-938;color=#3474B3;Name=yflG;locus_tag=BSU_07690,BSU07690 basu168 BSGatlas CDS 839735 840484 . - 0 ID=BSGatlas-gene-938_transcribed;color=#3474B3;Name=yflG;Parent=BSGatlas-transcript-853,BSGatlas-transcript-854,BSGatlas-transcript-855,BSGatlas-transcript-856;comment="methionine aminopeptidase B";ec="3.4.11.18,EC-3.4.11.18";go="GO:0004177 aminopeptidase activity,GO:0005737 cytoplasm,GO:0006508 proteolysis,GO:0008233 peptidase activity,GO:0008235 metalloexopeptidase activity,GO:0016787 hydrolase activity,GO:0046872 metal ion binding,GO:0070006 metalloaminopeptidase activity,GO:0070084 protein initiator methionine removal";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.12 Translation/ other,SW 3.3.4 Protein modification,SW 3.3.4.1 Protein maturation";synonyms="mapB,yflG";derives_from=BSGatlas-gene-938 basu168 BSGatlas UTR 840485 841664 . - . ID=BSGatlas-5'UTR-507;Parent=BSGatlas-transcript-854,BSGatlas-transcript-856;comment="5'UTR" basu168 BSGatlas UTR 840485 840515 . - . ID=BSGatlas-5'UTR-506;Parent=BSGatlas-transcript-853,BSGatlas-transcript-855;comment="5'UTR" basu168 BSGatlas transcript 840626 842055 . + . ID=BSGatlas-transcript-858;color=#FF9900;Parent=BSGatlas-gene-939;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 840626 842014 . + . ID=BSGatlas-transcript-857;color=#FF9900;Parent=BSGatlas-gene-939;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 840626 840655 . + . ID=BSGatlas-5'UTR-508;Parent=BSGatlas-transcript-857,BSGatlas-transcript-858;comment="5'UTR" basu168 BSGatlas gene 840656 842014 . + . ID=BSGatlas-gene-939;color=#1E90FF;Name=nagP;locus_tag=BSU_07700,BSU07700 basu168 BSGatlas CDS 840656 842014 . + 0 ID=BSGatlas-gene-939_transcribed;color=#1E90FF;Name=nagP;Parent=BSGatlas-transcript-857,BSGatlas-transcript-858;comment="phosphotransferase system (PTS)N-acetylglucosamine-specific enzyme IICB component";ec="2.7.1.69";go="GO:0005351 carbohydrate:proton symporter activity,GO:0005886 plasma membrane,GO:0006046 N-acetylglucosamine catabolic process,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015572 N-acetylglucosamine transmembrane transporter activity,GO:0015764 N-acetylglucosamine transport,GO:0015992 NA,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0019866 organelle inner membrane,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport,GO:0055085 transmembrane transport,GO:1901264 carbohydrate derivative transport";kegg_pathways="Amino sugar and nucleotide sugar metabolism (ko00520),Phosphotransferase system (PTS) (ko02060)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.17 Utilization of amino sugars,SW 2.3 Amino acid/ nitrogen metabolism,SW 2.3.3 Utilization of nitrogen sources other than amino acids,SW 2.3.3.3 Utilization of amino sugars,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue";synonyms="nagP,yflF";derives_from=BSGatlas-gene-939 basu168 BSGatlas transcript 842004 844837 . - . ID=BSGatlas-transcript-861;color=#B37924;Parent=BSGatlas-gene-940;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 842004 844608 . - . ID=BSGatlas-transcript-860;color=#B37924;Parent=BSGatlas-gene-940;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 842004 844071 . - . ID=BSGatlas-transcript-859;color=#B37924;Parent=BSGatlas-gene-940;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 842004 842046 . - . ID=BSGatlas-3'UTR-303;Parent=BSGatlas-transcript-859,BSGatlas-transcript-860,BSGatlas-transcript-861;comment="3'UTR" basu168 BSGatlas UTR 842015 842055 . + . ID=BSGatlas-3'UTR-304;Parent=BSGatlas-transcript-858;comment="3'UTR" basu168 BSGatlas gene 842047 843996 . - . ID=BSGatlas-gene-940;color=#3474B3;Name=ltaS;locus_tag=BSU_07710,BSU07710 basu168 BSGatlas CDS 842047 843996 . - 0 ID=BSGatlas-gene-940_transcribed;color=#3474B3;Name=ltaS;Parent=BSGatlas-transcript-859,BSGatlas-transcript-860,BSGatlas-transcript-861;comment="enzyme responsible for polyglycerolphosphate LTAsynthesis";ec="2.7.8.-";go="GO:0003824 catalytic activity,GO:0005576 extracellular region,GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0008484 sulfuric ester hydrolase activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016740 transferase activity,GO:0046872 metal ion binding,GO:0070395 lipoteichoic acid biosynthetic process";kegg_pathways="Glycerolipid metabolism (ko00561),Metabolic pathways (ko01100)";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.1 Cell wall synthesis,SW 1.1.1.3 Biosynthesis of lipoteichoic acid,SW 2 Metabolism,SW 2.6 Additional metabolic pathways,SW 2.6.1 Biosynthesis of cell wall components,SW 2.6.1.2 Biosynthesis of lipoteichoic acid,SW 6 Groups of genes,SW 6.12 Secreted proteins,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.6 Phosphorylation on a Thr residue";synonyms="ltaS,yflE";derives_from=BSGatlas-gene-940 basu168 BSGatlas transcript 843132 846396 . + . ID=BSGatlas-transcript-862;color=#FF9900;Parent=BSGatlas-gene-941,BSGatlas-gene-942,BSGatlas-gene-943;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 843132 844096 . + . ID=BSGatlas-5'UTR-509;Parent=BSGatlas-transcript-862;comment="5'UTR" basu168 BSGatlas UTR 843997 844837 . - . ID=BSGatlas-5'UTR-512;Parent=BSGatlas-transcript-861;comment="5'UTR" basu168 BSGatlas UTR 843997 844608 . - . ID=BSGatlas-5'UTR-511;Parent=BSGatlas-transcript-860;comment="5'UTR" basu168 BSGatlas UTR 843997 844071 . - . ID=BSGatlas-5'UTR-510;Parent=BSGatlas-transcript-859;comment="5'UTR" basu168 BSGatlas gene 844097 844234 . + . ID=BSGatlas-gene-941;color=#1E90FF;Name=yflD;locus_tag=BSU_07720,BSU07720 basu168 BSGatlas CDS 844097 844234 . + 0 ID=BSGatlas-gene-941_transcribed;color=#1E90FF;Name=yflD;Parent=BSGatlas-transcript-862;comment="hypothetical protein";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yflD";derives_from=BSGatlas-gene-941 basu168 BSGatlas transcript 844212 846396 . + . ID=BSGatlas-transcript-863;color=#FF9900;Parent=BSGatlas-gene-942,BSGatlas-gene-943;comment="Based on: BSGatlas" basu168 BSGatlas UTR 844212 844252 . + . ID=BSGatlas-5'UTR-513;Parent=BSGatlas-transcript-863;comment="5'UTR" basu168 BSGatlas UTR 844235 844252 . + . ID=BSGatlas-internal_UTR-240;Parent=BSGatlas-transcript-862;comment="internal_UTR" basu168 BSGatlas gene 844253 844645 . + . ID=BSGatlas-gene-942;color=#1E90FF;Name=yflB;locus_tag=BSU_07735,BSU07735 basu168 BSGatlas CDS 844253 844645 . + 0 ID=BSGatlas-gene-942_transcribed;color=#1E90FF;Name=yflB;Parent=BSGatlas-transcript-862,BSGatlas-transcript-863;comment="conserved hypothetical protein";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yflB,yflC";derives_from=BSGatlas-gene-942 basu168 BSGatlas UTR 844646 844769 . + . ID=BSGatlas-internal_UTR-241;Parent=BSGatlas-transcript-862,BSGatlas-transcript-863;comment="internal_UTR" basu168 BSGatlas transcript 844748 846396 . + . ID=BSGatlas-transcript-864;color=#FF9900;Parent=BSGatlas-gene-943;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 844748 844769 . + . ID=BSGatlas-5'UTR-514;Parent=BSGatlas-transcript-864;comment="5'UTR" basu168 BSGatlas gene 844770 846185 . + . ID=BSGatlas-gene-943;color=#1E90FF;Name=yflA;locus_tag=BSU_07750,BSU07750 basu168 BSGatlas CDS 844770 846185 . + 0 ID=BSGatlas-gene-943_transcribed;color=#1E90FF;Name=yflA;Parent=BSGatlas-transcript-862,BSGatlas-transcript-863,BSGatlas-transcript-864;comment="putative aminoacid transporter";go="GO:0000303 response to superoxide,GO:0003333 amino acid transmembrane transport,GO:0005886 plasma membrane,GO:0006810 transport,GO:0015293 symporter activity,GO:0015655 alanine:sodium symporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0032328 alanine transport,GO:0035725 sodium ion transmembrane transport,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.3 Alanine or glycine cation symporter family,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yflA";derives_from=BSGatlas-gene-943 basu168 BSGatlas transcript 846182 852163 . - . ID=BSGatlas-transcript-4954;color=#B37924;Parent=BSGatlas-gene-947,BSGatlas-gene-946,BSGatlas-gene-945,BSGatlas-gene-944;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 846182 850425 . - . ID=BSGatlas-transcript-4953;color=#B37924;Parent=BSGatlas-gene-947,BSGatlas-gene-946,BSGatlas-gene-945,BSGatlas-gene-944;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas transcript 846182 850227 . - . ID=BSGatlas-transcript-4952;color=#B37924;Parent=BSGatlas-gene-947,BSGatlas-gene-946,BSGatlas-gene-945,BSGatlas-gene-944;comment="Based on: BsubCyc,SubtiWiki" basu168 BSGatlas gene 846182 847258 . - . ID=BSGatlas-gene-944;color=#3474B3;Name=yfkT;locus_tag=BSU_07760,BSU07760 basu168 BSGatlas CDS 846182 847258 . - 0 ID=BSGatlas-gene-944_transcribed;color=#3474B3;Name=yfkT;Parent=BSGatlas-transcript-4952,BSGatlas-transcript-4953,BSGatlas-transcript-4954;comment="putative spore germination integral innermembrane transporter";go="GO:0000303 response to superoxide,GO:0005886 plasma membrane,GO:0006810 transport,GO:0009847 spore germination,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.1 Amino acid transporters,SW 1.2.4.1.4 APC superfamily,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.5 Germination/ based on similarity,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkT";derives_from=BSGatlas-gene-944 basu168 BSGatlas UTR 846186 846396 . + . ID=BSGatlas-3'UTR-306;Parent=BSGatlas-transcript-862,BSGatlas-transcript-863,BSGatlas-transcript-864;comment="3'UTR" basu168 BSGatlas UTR 847259 847281 . - . ID=BSGatlas-internal_UTR-242;Parent=BSGatlas-transcript-4952,BSGatlas-transcript-4953,BSGatlas-transcript-4954;comment="internal_UTR" basu168 BSGatlas gene 847282 847482 . - . ID=BSGatlas-gene-945;color=#3474B3;Name=yfkS;locus_tag=BSU_07770,BSU07770 basu168 BSGatlas CDS 847282 847482 . - 0 ID=BSGatlas-gene-945_transcribed;color=#3474B3;Name=yfkS;Parent=BSGatlas-transcript-4952,BSGatlas-transcript-4953,BSGatlas-transcript-4954;comment="putative spore germination D protein";go="GO:0000303 response to superoxide,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.5 Germination/ based on similarity,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkS";derives_from=BSGatlas-gene-945 basu168 BSGatlas gene 847498 848652 . - . ID=BSGatlas-gene-946;color=#3474B3;Name=yfkR;locus_tag=BSU_07780,BSU07780 basu168 BSGatlas CDS 847498 848652 . - 0 ID=BSGatlas-gene-946_transcribed;color=#3474B3;Name=yfkR;Parent=BSGatlas-transcript-4952,BSGatlas-transcript-4953,BSGatlas-transcript-4954;comment="putative spore germination protein";go="GO:0005886 plasma membrane,GO:0009847 spore germination,GO:0016020 membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.5 Germination/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkR";derives_from=BSGatlas-gene-946 basu168 BSGatlas gene 848633 850174 . - . ID=BSGatlas-gene-947;color=#3474B3;Name=yfkQ;locus_tag=BSU_07790,BSU07790 basu168 BSGatlas CDS 848633 850174 . - 0 ID=BSGatlas-gene-947_transcribed;color=#3474B3;Name=yfkQ;Parent=BSGatlas-transcript-4952,BSGatlas-transcript-4953,BSGatlas-transcript-4954;comment="putative spore germination protein";go="GO:0005886 plasma membrane,GO:0009847 spore germination,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.5 Germination/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkQ";derives_from=BSGatlas-gene-947 basu168 BSGatlas UTR 850175 852163 . - . ID=BSGatlas-5'UTR-517;Parent=BSGatlas-transcript-4954;comment="5'UTR" basu168 BSGatlas UTR 850175 850425 . - . ID=BSGatlas-5'UTR-516;Parent=BSGatlas-transcript-4953;comment="5'UTR" basu168 BSGatlas UTR 850175 850227 . - . ID=BSGatlas-5'UTR-515;Parent=BSGatlas-transcript-4952;comment="5'UTR" basu168 BSGatlas transcript 850321 854314 . + . ID=BSGatlas-transcript-868;color=#FF9900;Parent=BSGatlas-gene-948,BSGatlas-gene-949,BSGatlas-gene-950;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 850321 850366 . + . ID=BSGatlas-5'UTR-518;Parent=BSGatlas-transcript-868;comment="5'UTR" basu168 BSGatlas gene 850367 851779 . + . ID=BSGatlas-gene-948;color=#1E90FF;Name=treP;locus_tag=BSU_07800,BSU07800 basu168 BSGatlas CDS 850367 851779 . + 0 ID=BSGatlas-gene-948_transcribed;color=#1E90FF;Name=treP;Parent=BSGatlas-transcript-868;comment="phosphotransferase system (PTS)trehalose-specific enzyme IIBC component";ec="2.7.1.201,2.7.1.69";go="GO:0000017 alpha-glucoside transport,GO:0005351 carbohydrate:proton symporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015574 trehalose transmembrane transporter activity,GO:0015771 trehalose transport,GO:0015992 NA,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport";kegg_pathways="Phosphotransferase system (PTS) (ko02060),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.20 Utilization of trehalose,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue";synonyms="treB,treP";derives_from=BSGatlas-gene-948 basu168 BSGatlas UTR 851780 851849 . + . ID=BSGatlas-internal_UTR-243;Parent=BSGatlas-transcript-868;comment="internal_UTR" basu168 BSGatlas gene 851850 853535 . + . ID=BSGatlas-gene-949;color=#1E90FF;Name=treA;locus_tag=BSU_07810,BSU07810 basu168 BSGatlas CDS 851850 853535 . + 0 ID=BSGatlas-gene-949_transcribed;color=#1E90FF;Name=treA;Parent=BSGatlas-transcript-868;comment="trehalose-6-phosphate hydrolase";ec="3.2.1.93,EC-3.2.1.93";go="GO:0003824 catalytic activity,GO:0005737 cytoplasm,GO:0005975 carbohydrate metabolic process,GO:0005993 trehalose catabolic process,GO:0008152 metabolic process,GO:0008788 alpha,alpha-phosphotrehalase activity,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0043169 cation binding";kegg_pathways="Metabolic pathways (ko01100),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.20 Utilization of trehalose";synonyms="treA,treC";derives_from=BSGatlas-gene-949 basu168 BSGatlas transcript 853531 854314 . + . ID=BSGatlas-transcript-869;color=#FF9900;Parent=BSGatlas-gene-950;comment="Based on: BSGatlas" basu168 BSGatlas UTR 853531 853555 . + . ID=BSGatlas-5'UTR-519;Parent=BSGatlas-transcript-869;comment="5'UTR" basu168 BSGatlas UTR 853536 853555 . + . ID=BSGatlas-internal_UTR-244;Parent=BSGatlas-transcript-868;comment="internal_UTR" basu168 BSGatlas gene 853556 854272 . + . ID=BSGatlas-gene-950;color=#1E90FF;Name=treR;locus_tag=BSU_07820,BSU07820 basu168 BSGatlas CDS 853556 854272 . + 0 ID=BSGatlas-gene-950_transcribed;color=#1E90FF;Name=treR;Parent=BSGatlas-transcript-868,BSGatlas-transcript-869;comment="transcriptional regulator (TreR-trehalose)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.20 Utilization of trehalose,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="treR,yfxA";derives_from=BSGatlas-gene-950 basu168 BSGatlas UTR 854273 854314 . + . ID=BSGatlas-3'UTR-307;Parent=BSGatlas-transcript-868,BSGatlas-transcript-869;comment="3'UTR" basu168 BSGatlas transcript 854375 855124 . + . ID=BSGatlas-transcript-871;color=#FF9900;Parent=BSGatlas-gene-951;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 854375 855077 . + . ID=BSGatlas-transcript-870;color=#FF9900;Parent=BSGatlas-gene-951;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 854375 854411 . + . ID=BSGatlas-5'UTR-520;Parent=BSGatlas-transcript-870,BSGatlas-transcript-871;comment="5'UTR" basu168 BSGatlas gene 854412 855077 . + . ID=BSGatlas-gene-951;color=#1E90FF;Name=hypO;locus_tag=BSU_07830,BSU07830 basu168 BSGatlas CDS 854412 855077 . + 0 ID=BSGatlas-gene-951_transcribed;color=#1E90FF;Name=hypO;Parent=BSGatlas-transcript-870,BSGatlas-transcript-871;comment="NAD(P)H-flavin oxidoreductase (nitroreductase)";ec="1.5.1.39,EC-1.5.1.39";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.1 Electron transport and ATP synthesis,SW 2.1.4 Electron transport/ other/ based on similarity,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="hypO,yfkO";derives_from=BSGatlas-gene-951 basu168 BSGatlas transcript 855072 859552 . - . ID=BSGatlas-transcript-872;color=#B37924;Parent=BSGatlas-gene-952;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 855072 855113 . - . ID=BSGatlas-3'UTR-308;Parent=BSGatlas-transcript-872;comment="3'UTR" basu168 BSGatlas UTR 855078 855124 . + . ID=BSGatlas-3'UTR-309;Parent=BSGatlas-transcript-871;comment="3'UTR" basu168 BSGatlas gene 855114 859502 . - . ID=BSGatlas-gene-952;color=#3474B3;Name=yfkN;locus_tag=BSU_07840,BSU07840 basu168 BSGatlas CDS 855114 859502 . - 0 ID=BSGatlas-gene-952_transcribed;color=#3474B3;Name=yfkN;Parent=BSGatlas-transcript-872;comment="exported 2',3'-cyclic-nucleotide2'-phosphodiesterase, 2' (or 3') nucleotidase and 5'nucleotidase";ec="3.1.4.16,3.1.4.16;3.1.3.5;3.1.3.6,EC-3.1.3.5;EC-3.1.3.99;EC-3.1.3.5;EC-3.1.4.16";go="GO:0000166 nucleotide binding,GO:0003824 catalytic activity,GO:0005576 extracellular region,GO:0005618 cell wall,GO:0008152 metabolic process,GO:0008253 5'-nucleotidase activity,GO:0008254 3'-nucleotidase activity,GO:0008663 2',3'-cyclic-nucleotide 2'-phosphodiesterase activity,GO:0009166 nucleotide catabolic process,GO:0016311 dephosphorylation,GO:0016787 hydrolase activity,GO:0016788 hydrolase activity, acting on ester bonds,GO:0046872 metal ion binding";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Metabolic pathways (ko01100),Nicotinate and nicotinamide metabolism (ko00760),Purine metabolism (ko00230),Pyrimidine metabolism (ko00240)";subtiwiki_category="SW 2 Metabolism,SW 2.5 Nucleotide metabolism,SW 2.5.3 Metabolism of signalling nucleotides,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="yfkN";derives_from=BSGatlas-gene-952 basu168 BSGatlas UTR 859503 859552 . - . ID=BSGatlas-5'UTR-521;Parent=BSGatlas-transcript-872;comment="5'UTR" basu168 BSGatlas transcript 859702 860305 . + . ID=BSGatlas-transcript-873;color=#FF9900;Parent=BSGatlas-gene-953;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 859702 859744 . + . ID=BSGatlas-5'UTR-522;Parent=BSGatlas-transcript-873;comment="5'UTR" basu168 BSGatlas gene 859745 860263 . + . ID=BSGatlas-gene-953;color=#1E90FF;Name=yfkM;locus_tag=BSU_07850,BSU07850 basu168 BSGatlas CDS 859745 860263 . + 0 ID=BSGatlas-gene-953_transcribed;color=#1E90FF;Name=yfkM;Parent=BSGatlas-transcript-873;comment="general stress protein 18; deglycase";ec="EC-4.2.1.130";go="GO:0000303 response to superoxide,GO:0006508 proteolysis,GO:0006950 response to stress,GO:0008233 peptidase activity,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="yfkM";derives_from=BSGatlas-gene-953 basu168 BSGatlas UTR 860264 860305 . + . ID=BSGatlas-3'UTR-310;Parent=BSGatlas-transcript-873;comment="3'UTR" basu168 BSGatlas transcript 860271 861847 . - . ID=BSGatlas-transcript-874;color=#B37924;Parent=BSGatlas-gene-955,BSGatlas-gene-954;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 860271 860302 . - . ID=BSGatlas-3'UTR-311;Parent=BSGatlas-transcript-874;comment="3'UTR" basu168 BSGatlas gene 860303 861493 . - . ID=BSGatlas-gene-954;color=#3474B3;Name=yfkL;locus_tag=BSU_07860,BSU07860 basu168 BSGatlas CDS 860303 861493 . - 0 ID=BSGatlas-gene-954_transcribed;color=#3474B3;Name=yfkL;Parent=BSGatlas-transcript-874;comment="efflux transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkL";derives_from=BSGatlas-gene-954 basu168 BSGatlas UTR 861494 861585 . - . ID=BSGatlas-internal_UTR-245;Parent=BSGatlas-transcript-874;comment="internal_UTR" basu168 BSGatlas transcript 861586 861847 . - . ID=BSGatlas-transcript-875;color=#B37924;Parent=BSGatlas-gene-955;comment="Based on: SubtiWiki" basu168 BSGatlas gene 861586 861801 . - . ID=BSGatlas-gene-955;color=#3474B3;Name=yfkK;locus_tag=BSU_07870,BSU07870 basu168 BSGatlas CDS 861586 861801 . - 0 ID=BSGatlas-gene-955_transcribed;color=#3474B3;Name=yfkK;Parent=BSGatlas-transcript-874,BSGatlas-transcript-875;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.7 Proteins of unknown function";synonyms="yfkK";derives_from=BSGatlas-gene-955 basu168 BSGatlas UTR 861802 861847 . - . ID=BSGatlas-5'UTR-523;Parent=BSGatlas-transcript-874,BSGatlas-transcript-875;comment="5'UTR" basu168 BSGatlas transcript 861953 863663 . + . ID=BSGatlas-transcript-876;color=#FF9900;Parent=BSGatlas-gene-956,BSGatlas-gene-957,BSGatlas-gene-958;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 861953 862003 . + . ID=BSGatlas-5'UTR-524;Parent=BSGatlas-transcript-876;comment="5'UTR" basu168 BSGatlas transcript 862004 863663 . + . ID=BSGatlas-transcript-877;color=#FF9900;Parent=BSGatlas-gene-956,BSGatlas-gene-957,BSGatlas-gene-958;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 862004 862474 . + . ID=BSGatlas-gene-956;color=#1E90FF;Name=yfkJ;locus_tag=BSU_07880,BSU07880 basu168 BSGatlas CDS 862004 862474 . + 0 ID=BSGatlas-gene-956_transcribed;color=#1E90FF;Name=yfkJ;Parent=BSGatlas-transcript-876,BSGatlas-transcript-877;comment="protein-tyrosine-phosphatase";ec="3.1.3.48,EC-3.1.3.48";go="GO:0000303 response to superoxide,GO:0004721 phosphoprotein phosphatase activity,GO:0004725 protein tyrosine phosphatase activity,GO:0016787 hydrolase activity,GO:0035335 peptidyl-tyrosine dephosphorylation";kegg_pathways="Two-component system (ko02020)";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.4 Protein phosphatases,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="yfkJ";derives_from=BSGatlas-gene-956 basu168 BSGatlas UTR 862475 862491 . + . ID=BSGatlas-internal_UTR-246;Parent=BSGatlas-transcript-876,BSGatlas-transcript-877;comment="internal_UTR" basu168 BSGatlas gene 862492 862812 . + . ID=BSGatlas-gene-957;color=#1E90FF;Name=yfkI;locus_tag=BSU_07890,BSU07890 basu168 BSGatlas CDS 862492 862812 . + 0 ID=BSGatlas-gene-957_transcribed;color=#1E90FF;Name=yfkI;Parent=BSGatlas-transcript-876,BSGatlas-transcript-877;comment="conserved hypothetical protein";go="GO:0000303 response to superoxide";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="yfkI";derives_from=BSGatlas-gene-957 basu168 BSGatlas UTR 862813 862835 . + . ID=BSGatlas-internal_UTR-247;Parent=BSGatlas-transcript-876,BSGatlas-transcript-877;comment="internal_UTR" basu168 BSGatlas gene 862836 863663 . + . ID=BSGatlas-gene-958;color=#1E90FF;Name=yfkH;locus_tag=BSU_07900,BSU07900 basu168 BSGatlas CDS 862836 863663 . + 0 ID=BSGatlas-gene-958_transcribed;color=#1E90FF;Name=yfkH;Parent=BSGatlas-transcript-876,BSGatlas-transcript-877;comment="putative ribonuclease BN";go="GO:0000303 response to superoxide,GO:0004518 nuclease activity,GO:0004527 exonuclease activity,GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016787 hydrolase activity,GO:0042542 response to hydrogen peroxide,GO:0090305 nucleic acid phosphodiester bond hydrolysis";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 4.3.8 Resistance against oxidative and electrophile stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkH";derives_from=BSGatlas-gene-958 basu168 BSGatlas transcript 863681 863869 . + . ID=BSGatlas-transcript-878;color=#FF9900;Parent=BSGatlas-gene-959;comment="Based on: BSGatlas" basu168 BSGatlas gene 863681 863837 . + . ID=BSGatlas-gene-959;color=#CC0000;Name=S275;locus_tag=new_863681_863837 basu168 BSGatlas ncRNA 863681 863837 . + . ID=BSGatlas-gene-959_transcribed;color=#CC0000;Name=S275;Parent=BSGatlas-transcript-878;synonyms="S275";derives_from=BSGatlas-gene-959 basu168 BSGatlas transcript 863691 865077 . - . ID=BSGatlas-transcript-879;color=#B37924;Parent=BSGatlas-gene-960;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 863691 863861 . - . ID=BSGatlas-3'UTR-312;Parent=BSGatlas-transcript-879;comment="3'UTR" basu168 BSGatlas transcript 863815 865077 . - . ID=BSGatlas-transcript-880;color=#B37924;Parent=BSGatlas-gene-960;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 863815 863861 . - . ID=BSGatlas-3'UTR-313;Parent=BSGatlas-transcript-880;comment="3'UTR" basu168 BSGatlas UTR 863838 863869 . + . ID=BSGatlas-3'UTR-314;Parent=BSGatlas-transcript-878;comment="3'UTR" basu168 BSGatlas gene 863862 865037 . - . ID=BSGatlas-gene-960;color=#3474B3;Name=yfkF;locus_tag=BSU_07910,BSU07910 basu168 BSGatlas CDS 863862 865037 . - 0 ID=BSGatlas-gene-960_transcribed;color=#3474B3;Name=yfkF;Parent=BSGatlas-transcript-879,BSGatlas-transcript-880;comment="putative efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkF";derives_from=BSGatlas-gene-960 basu168 BSGatlas transcript 864500 867169 . + . ID=BSGatlas-transcript-881;color=#FF9900;Parent=BSGatlas-gene-961,BSGatlas-gene-962;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 864500 865204 . + . ID=BSGatlas-5'UTR-525;Parent=BSGatlas-transcript-881;comment="5'UTR" basu168 BSGatlas UTR 865038 865077 . - . ID=BSGatlas-5'UTR-526;Parent=BSGatlas-transcript-879,BSGatlas-transcript-880;comment="5'UTR" basu168 BSGatlas transcript 865155 867169 . + . ID=BSGatlas-transcript-882;color=#FF9900;Parent=BSGatlas-gene-961,BSGatlas-gene-962;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 865155 865204 . + . ID=BSGatlas-5'UTR-527;Parent=BSGatlas-transcript-882;comment="5'UTR" basu168 BSGatlas gene 865205 866260 . + . ID=BSGatlas-gene-961;color=#1E90FF;Name=chaA;locus_tag=BSU_07920,BSU07920 basu168 BSGatlas CDS 865205 866260 . + 0 ID=BSGatlas-gene-961_transcribed;color=#1E90FF;Name=chaA;Parent=BSGatlas-transcript-881,BSGatlas-transcript-882;comment="H+/Ca2+ antiporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006811 ion transport,GO:0006812 cation transport,GO:0008324 cation transmembrane transporter activity,GO:0015369 calcium:proton antiporter activity,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0034220 ion transmembrane transport,GO:0042802 identical protein binding,GO:0055085 transmembrane transport,GO:0070588 calcium ion transmembrane transport,GO:1902600 proton transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.5 Metal ion transporter,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.4 Metal ion homeostasis/ Other,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB),SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="chaA,yfkE";derives_from=BSGatlas-gene-961 basu168 BSGatlas UTR 866261 866330 . + . ID=BSGatlas-internal_UTR-248;Parent=BSGatlas-transcript-881,BSGatlas-transcript-882;comment="internal_UTR" basu168 BSGatlas transcript 866299 867169 . + . ID=BSGatlas-transcript-883;color=#FF9900;Parent=BSGatlas-gene-962;comment="Based on: BSGatlas" basu168 BSGatlas UTR 866299 866330 . + . ID=BSGatlas-5'UTR-528;Parent=BSGatlas-transcript-883;comment="5'UTR" basu168 BSGatlas gene 866331 867125 . + . ID=BSGatlas-gene-962;color=#1E90FF;Name=yfkD;locus_tag=BSU_07930,BSU07930 basu168 BSGatlas CDS 866331 867125 . + 0 ID=BSGatlas-gene-962_transcribed;color=#1E90FF;Name=yfkD;Parent=BSGatlas-transcript-881,BSGatlas-transcript-882,BSGatlas-transcript-883;comment="conserved hypothetical protein";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other,SW 4.3 Coping with stress,SW 4.3.1 General stress proteins (controlled by SigB)";synonyms="yfkD";derives_from=BSGatlas-gene-962 basu168 BSGatlas transcript 867119 869187 . - . ID=BSGatlas-transcript-884;color=#B37924;Parent=BSGatlas-gene-964,BSGatlas-gene-963;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 867119 867163 . - . ID=BSGatlas-3'UTR-315;Parent=BSGatlas-transcript-884;comment="3'UTR" basu168 BSGatlas UTR 867126 867169 . + . ID=BSGatlas-3'UTR-316;Parent=BSGatlas-transcript-881,BSGatlas-transcript-882,BSGatlas-transcript-883;comment="3'UTR" basu168 BSGatlas gene 867164 868006 . - . ID=BSGatlas-gene-963;color=#3474B3;Name=yfkC;locus_tag=BSU_07940,BSU07940 basu168 BSGatlas CDS 867164 868006 . - 0 ID=BSGatlas-gene-963_transcribed;color=#3474B3;Name=yfkC;Parent=BSGatlas-transcript-884;comment="mechanosensitive ion channel";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.7 Coping with hypo-osmotic stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfkC";derives_from=BSGatlas-gene-963 basu168 BSGatlas gene 868007 869128 . - . ID=BSGatlas-gene-964;color=#3474B3;Name=yfkA;locus_tag=BSU_07955,BSU07955 basu168 BSGatlas CDS 868007 869128 . - 0 ID=BSGatlas-gene-964_transcribed;color=#3474B3;Name=yfkA;Parent=BSGatlas-transcript-884;comment="putative Fe-S oxidoreductase, radical SAMsuperfamily";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0046872 metal ion binding,GO:0051536 iron-sulfur cluster binding,GO:0051539 4 iron, 4 sulfur cluster binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.14 Translation factor modification and maturation,SW 3.3.4 Protein modification,SW 3.3.4.8 Protein modification/ other,SW 6 Groups of genes,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yfkA,yfkB";derives_from=BSGatlas-gene-964 basu168 BSGatlas UTR 869129 869187 . - . ID=BSGatlas-5'UTR-529;Parent=BSGatlas-transcript-884;comment="5'UTR" basu168 BSGatlas transcript 869247 869492 . + . ID=BSGatlas-transcript-885;color=#FF9900;Parent=BSGatlas-gene-965;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 869247 869272 . + . ID=BSGatlas-5'UTR-530;Parent=BSGatlas-transcript-885;comment="5'UTR" basu168 BSGatlas gene 869273 869458 . + . ID=BSGatlas-gene-965;color=#1E90FF;Name=yfjT;locus_tag=BSU_07970,BSU07970 basu168 BSGatlas CDS 869273 869458 . + 0 ID=BSGatlas-gene-965_transcribed;color=#1E90FF;Name=yfjT;Parent=BSGatlas-transcript-885;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfjT";derives_from=BSGatlas-gene-965 basu168 BSGatlas UTR 869459 869492 . + . ID=BSGatlas-3'UTR-317;Parent=BSGatlas-transcript-885;comment="3'UTR" basu168 BSGatlas transcript 869513 870396 . + . ID=BSGatlas-transcript-886;color=#FF9900;Parent=BSGatlas-gene-966;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 869513 869558 . + . ID=BSGatlas-5'UTR-531;Parent=BSGatlas-transcript-886;comment="5'UTR" basu168 BSGatlas gene 869559 870350 . + . ID=BSGatlas-gene-966;color=#1E90FF;Name=pdaA;locus_tag=BSU_07980,BSU07980 basu168 BSGatlas CDS 869559 870350 . + 0 ID=BSGatlas-gene-966_transcribed;color=#1E90FF;Name=pdaA;Parent=BSGatlas-transcript-886;comment="exported peptidoglycan N-acetylmuramic aciddeacetylase";ec="3.5.1.-";go="GO:0003824 catalytic activity,GO:0005975 carbohydrate metabolic process,GO:0016787 hydrolase activity,GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds,GO:0030435 sporulation resulting in formation of a cellular spore,GO:0046872 metal ion binding";subtiwiki_category="SW 1 Cellular processes,SW 1.1 Cell envelope and cell division,SW 1.1.5 Cell wall/ other,SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.4 Sporulation proteins/ other";synonyms="pdaA,yfjS";derives_from=BSGatlas-gene-966 basu168 BSGatlas transcript 870344 871282 . - . ID=BSGatlas-transcript-887;color=#B37924;Parent=BSGatlas-gene-967;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 870344 870387 . - . ID=BSGatlas-3'UTR-318;Parent=BSGatlas-transcript-887;comment="3'UTR" basu168 BSGatlas UTR 870351 870396 . + . ID=BSGatlas-3'UTR-319;Parent=BSGatlas-transcript-886;comment="3'UTR" basu168 BSGatlas gene 870388 871248 . - . ID=BSGatlas-gene-967;color=#3474B3;Name=yfjR;locus_tag=BSU_07990,BSU07990 basu168 BSGatlas CDS 870388 871248 . - 0 ID=BSGatlas-gene-967_transcribed;color=#3474B3;Name=yfjR;Parent=BSGatlas-transcript-887;comment="putative beta-hydroxyacid dehydrogenase";ec="1.1.1.-";go="GO:0004616 phosphogluconate dehydrogenase (decarboxylating) activity,GO:0006098 pentose-phosphate shunt,GO:0016491 oxidoreductase activity,GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,GO:0050662 coenzyme binding,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.8 Phosphorylation on either a Ser, Thr or Tyr residue,SW 6.6 Poorly characterized/ putative enzymes";synonyms="yfjR";derives_from=BSGatlas-gene-967 basu168 BSGatlas UTR 871249 871282 . - . ID=BSGatlas-5'UTR-532;Parent=BSGatlas-transcript-887;comment="5'UTR" basu168 BSGatlas transcript 871313 872306 . - . ID=BSGatlas-transcript-888;color=#B37924;Parent=BSGatlas-gene-968;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 871313 871346 . - . ID=BSGatlas-3'UTR-320;Parent=BSGatlas-transcript-888;comment="3'UTR" basu168 BSGatlas gene 871347 872306 . - . ID=BSGatlas-gene-968;color=#3474B3;Name=yfjQ;locus_tag=BSU_08000,BSU08000 basu168 BSGatlas CDS 871347 872306 . - 0 ID=BSGatlas-gene-968_transcribed;color=#3474B3;Name=yfjQ;Parent=BSGatlas-transcript-888;comment="divalent cation (octahedral coordination)transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0006824 cobalt ion transport,GO:0015087 cobalt ion transmembrane transporter activity,GO:0015095 magnesium ion transmembrane transporter activity,GO:0015693 magnesium ion transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0030001 metal ion transport,GO:0034220 ion transmembrane transport,GO:0046873 metal ion transmembrane transporter activity";subtiwiki_category="SW 1 Cellular processes,SW 1.3 Homeostasis,SW 1.3.1 Metal ion homeostasis (K, Na, Ca, Mg),SW 1.3.1.1 Magnesium uptake/ efflux,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfjQ";derives_from=BSGatlas-gene-968 basu168 BSGatlas transcript 872394 874898 . + . ID=BSGatlas-transcript-890;color=#FF9900;Parent=BSGatlas-gene-969,BSGatlas-gene-970;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 872394 874836 . + . ID=BSGatlas-transcript-889;color=#FF9900;Parent=BSGatlas-gene-969,BSGatlas-gene-970;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 872394 872424 . + . ID=BSGatlas-5'UTR-533;Parent=BSGatlas-transcript-889,BSGatlas-transcript-890;comment="5'UTR" basu168 BSGatlas gene 872425 873288 . + . ID=BSGatlas-gene-969;color=#1E90FF;Name=yfjP;locus_tag=BSU_08010,BSU08010 basu168 BSGatlas CDS 872425 873288 . + 0 ID=BSGatlas-gene-969_transcribed;color=#1E90FF;Name=yfjP;Parent=BSGatlas-transcript-889,BSGatlas-transcript-890;comment="putative DNA-3-methyladenine glycosylase";ec="3.2.2.21";go="GO:0003677 DNA binding,GO:0003824 catalytic activity,GO:0006281 DNA repair,GO:0006284 base-excision repair,GO:0006974 cellular response to DNA damage stimulus,GO:0008725 DNA-3-methyladenine glycosylase activity,GO:0016787 hydrolase activity,GO:0043916 DNA-7-methylguanine glycosylase activity,GO:0052821 DNA-7-methyladenine glycosylase activity,GO:0052822 DNA-3-methylguanine glycosylase activity";kegg_pathways="Base excision repair (ko03410)";subtiwiki_category="SW 3 Information processing,SW 3.1 Genetics,SW 3.1.6 DNA repair/ recombination/ based on similarity";synonyms="yfjP";derives_from=BSGatlas-gene-969 basu168 BSGatlas UTR 873289 873401 . + . ID=BSGatlas-internal_UTR-249;Parent=BSGatlas-transcript-889,BSGatlas-transcript-890;comment="internal_UTR" basu168 BSGatlas gene 873402 874802 . + . ID=BSGatlas-gene-970;color=#1E90FF;Name=yfjO;locus_tag=BSU_08020,BSU08020 basu168 BSGatlas CDS 873402 874802 . + 0 ID=BSGatlas-gene-970_transcribed;color=#1E90FF;Name=yfjO;Parent=BSGatlas-transcript-889,BSGatlas-transcript-890;comment="putative RNA methyltransferase";ec="2.1.1.-";go="GO:0001510 RNA methylation,GO:0003723 RNA binding,GO:0006396 RNA processing,GO:0008168 methyltransferase activity,GO:0008173 RNA methyltransferase activity,GO:0016740 transferase activity,GO:0032259 methylation,GO:0046872 metal ion binding,GO:0051536 iron-sulfur cluster binding,GO:0051539 4 iron, 4 sulfur cluster binding";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.3 rRNA modification and maturation/ based on similarity";synonyms="yfjO";derives_from=BSGatlas-gene-970 basu168 BSGatlas UTR 874803 874898 . + . ID=BSGatlas-3'UTR-322;Parent=BSGatlas-transcript-890;comment="3'UTR" basu168 BSGatlas UTR 874803 874836 . + . ID=BSGatlas-3'UTR-321;Parent=BSGatlas-transcript-889;comment="3'UTR" basu168 BSGatlas transcript 875137 875694 . + . ID=BSGatlas-transcript-891;color=#FF9900;Parent=BSGatlas-gene-971;comment="Based on: BSGatlas" basu168 BSGatlas UTR 875137 875427 . + . ID=BSGatlas-5'UTR-534;Parent=BSGatlas-transcript-891;comment="5'UTR" basu168 BSGatlas gene 875428 875694 . + . ID=BSGatlas-gene-971;color=#1E90FF;Name=yfzA;locus_tag=BSU_08029,BSU08029 basu168 BSGatlas CDS 875428 875694 . + 0 ID=BSGatlas-gene-971_transcribed;color=#1E90FF;Name=yfzA;Parent=BSGatlas-transcript-891;comment="conserved hypothetical protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfzA";derives_from=BSGatlas-gene-971 basu168 BSGatlas transcript 876178 877512 . + . ID=BSGatlas-transcript-892;color=#FF9900;Parent=BSGatlas-gene-972;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 876178 876425 . + . ID=BSGatlas-5'UTR-535;Parent=BSGatlas-transcript-892;comment="5'UTR" basu168 BSGatlas gene 876426 877403 . + . ID=BSGatlas-gene-972;color=#1E90FF;Name=yfjN;locus_tag=BSU_08030,BSU08030 basu168 BSGatlas CDS 876426 877403 . + 0 ID=BSGatlas-gene-972_transcribed;color=#1E90FF;Name=yfjN;Parent=BSGatlas-transcript-892;comment="tRNA-dihydrouridine synthase 2";ec="1.-.-.-,EC-1.1.1";go="GO:0002943 tRNA dihydrouridine synthesis,GO:0003824 catalytic activity,GO:0008033 tRNA processing,GO:0016491 oxidoreductase activity,GO:0017150 tRNA dihydrouridine synthase activity,GO:0050660 flavin adenine dinucleotide binding,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.8 tRNA modification and maturation";synonyms="dus2,dusC,yfjN";derives_from=BSGatlas-gene-972 basu168 BSGatlas UTR 877404 877512 . + . ID=BSGatlas-3'UTR-323;Parent=BSGatlas-transcript-892;comment="3'UTR" basu168 BSGatlas transcript 877564 878844 . + . ID=BSGatlas-transcript-894;color=#FF9900;Parent=BSGatlas-gene-973,BSGatlas-gene-974;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 877564 878797 . + . ID=BSGatlas-transcript-893;color=#FF9900;Parent=BSGatlas-gene-973,BSGatlas-gene-974;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 877564 877598 . + . ID=BSGatlas-5'UTR-536;Parent=BSGatlas-transcript-893,BSGatlas-transcript-894;comment="5'UTR" basu168 BSGatlas gene 877599 878051 . + . ID=BSGatlas-gene-973;color=#1E90FF;Name=yfjM;locus_tag=BSU_08040,BSU08040 basu168 BSGatlas CDS 877599 878051 . + 0 ID=BSGatlas-gene-973_transcribed;color=#1E90FF;Name=yfjM;Parent=BSGatlas-transcript-893,BSGatlas-transcript-894;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfjM";derives_from=BSGatlas-gene-973 basu168 BSGatlas UTR 878052 878080 . + . ID=BSGatlas-internal_UTR-250;Parent=BSGatlas-transcript-893,BSGatlas-transcript-894;comment="internal_UTR" basu168 BSGatlas gene 878081 878770 . + . ID=BSGatlas-gene-974;color=#1E90FF;Name=yfjL;locus_tag=BSU_08050,BSU08050 basu168 BSGatlas CDS 878081 878770 . + 0 ID=BSGatlas-gene-974_transcribed;color=#1E90FF;Name=yfjL;Parent=BSGatlas-transcript-893,BSGatlas-transcript-894;comment="conserved hypothetical protein";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.1 Translation,SW 3.3.1.5 Ribosomal protein/ based on similarity";synonyms="yfjL,yztA";derives_from=BSGatlas-gene-974 basu168 BSGatlas UTR 878771 878844 . + . ID=BSGatlas-3'UTR-325;Parent=BSGatlas-transcript-894;comment="3'UTR" basu168 BSGatlas UTR 878771 878797 . + . ID=BSGatlas-3'UTR-324;Parent=BSGatlas-transcript-893;comment="3'UTR" basu168 BSGatlas transcript 878974 883695 . + . ID=BSGatlas-transcript-895;color=#FF9900;Parent=BSGatlas-gene-975,BSGatlas-gene-976,BSGatlas-gene-977,BSGatlas-gene-978;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 878974 879001 . + . ID=BSGatlas-5'UTR-537;Parent=BSGatlas-transcript-895;comment="5'UTR" basu168 BSGatlas gene 879002 880003 . + . ID=BSGatlas-gene-975;color=#1E90FF;Name=acoA;locus_tag=BSU_08060,BSU08060 basu168 BSGatlas CDS 879002 880003 . + 0 ID=BSGatlas-gene-975_transcribed;color=#1E90FF;Name=acoA;Parent=BSGatlas-transcript-895;comment="acetoin dehydrogenase E1 component(TPP-dependent alpha subunit)";ec="1.1.1.303;2.3.1.190";go="GO:0008152 metabolic process,GO:0016491 oxidoreductase activity,GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor,GO:0045150 acetoin catabolic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.2 Utilization of acetoin";synonyms="acoA,yfjK";derives_from=BSGatlas-gene-975 basu168 BSGatlas gene 880007 881035 . + . ID=BSGatlas-gene-976;color=#1E90FF;Name=acoB;locus_tag=BSU_08070,BSU08070 basu168 BSGatlas CDS 880007 881035 . + 0 ID=BSGatlas-gene-976_transcribed;color=#1E90FF;Name=acoB;Parent=BSGatlas-transcript-895;comment="acetoin dehydrogenase E1 component(TPP-dependent beta subunit)";ec="1.1.1.303;2.3.1.190";go="GO:0003824 catalytic activity,GO:0008152 metabolic process,GO:0016491 oxidoreductase activity,GO:0045150 acetoin catabolic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.2 Utilization of acetoin";synonyms="acoB,yfjJ";derives_from=BSGatlas-gene-976 basu168 BSGatlas gene 881049 882245 . + . ID=BSGatlas-gene-977;color=#1E90FF;Name=acoC;locus_tag=BSU_08080,BSU08080 basu168 BSGatlas CDS 881049 882245 . + 0 ID=BSGatlas-gene-977_transcribed;color=#1E90FF;Name=acoC;Parent=BSGatlas-transcript-895;comment="acetoin dehydrogenase E2 component(dihydrolipoamide acetyltransferase)";ec="2.3.1.12,EC-2.3.1.12";go="GO:0004742 dihydrolipoyllysine-residue acetyltransferase activity,GO:0008152 metabolic process,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups,GO:0045150 acetoin catabolic process";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Carbon metabolism (ko01200),Citrate cycle (TCA cycle) (ko00020),Glycolysis / Gluconeogenesis (ko00010),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Pyruvate metabolism (ko00620)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.2 Utilization of acetoin";synonyms="acoC,yfjI";derives_from=BSGatlas-gene-977 basu168 BSGatlas UTR 882246 882265 . + . ID=BSGatlas-internal_UTR-251;Parent=BSGatlas-transcript-895;comment="internal_UTR" basu168 BSGatlas gene 882266 883642 . + . ID=BSGatlas-gene-978;color=#1E90FF;Name=acoL;locus_tag=BSU_08090,BSU08090 basu168 BSGatlas CDS 882266 883642 . + 0 ID=BSGatlas-gene-978_transcribed;color=#1E90FF;Name=acoL;Parent=BSGatlas-transcript-895;comment="acetoin dehydrogenase E3 component(dihydrolipoamide dehydrogenase)";ec="1.8.1.4,EC-1.8.1.4";go="GO:0004148 dihydrolipoyl dehydrogenase activity,GO:0005737 cytoplasm,GO:0006096 glycolytic process,GO:0016491 oxidoreductase activity,GO:0016668 oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor,GO:0045150 acetoin catabolic process,GO:0045454 cell redox homeostasis,GO:0050660 flavin adenine dinucleotide binding,GO:0055114 oxidation-reduction process";kegg_pathways="Biosynthesis of secondary metabolites (ko01110),Carbon metabolism (ko01200),Citrate cycle (TCA cycle) (ko00020),Glycine serine and threonine metabolism (ko00260),Glycolysis / Gluconeogenesis (ko00010),Glyoxylate and dicarboxylate metabolism (ko00630),Lysine degradation (ko00310),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Propanoate metabolism (ko00640),Pyruvate metabolism (ko00620),Tryptophan metabolism (ko00380),Valine leucine and isoleucine degradation (ko00280)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.2 Utilization of acetoin";synonyms="acoL,yfjH";derives_from=BSGatlas-gene-978 basu168 BSGatlas UTR 883643 883695 . + . ID=BSGatlas-3'UTR-326;Parent=BSGatlas-transcript-895;comment="3'UTR" basu168 BSGatlas transcript 883717 885853 . + . ID=BSGatlas-transcript-896;color=#FF9900;Parent=BSGatlas-gene-979,BSGatlas-gene-980;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 883717 883757 . + . ID=BSGatlas-5'UTR-538;Parent=BSGatlas-transcript-896;comment="5'UTR" basu168 BSGatlas gene 883758 885575 . + . ID=BSGatlas-gene-979;color=#1E90FF;Name=acoR;locus_tag=BSU_08100,BSU08100 basu168 BSGatlas CDS 883758 885575 . + 0 ID=BSGatlas-gene-979_transcribed;color=#1E90FF;Name=acoR;Parent=BSGatlas-transcript-896;comment="transcriptional regulator (AcoR-acetoin)";go="GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0003677 DNA binding,GO:0005524 ATP binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0008134 transcription factor binding,GO:0017111 nucleoside-triphosphatase activity,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.2 Utilization of acetoin,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="acoR,yfjG,yzcB";derives_from=BSGatlas-gene-979 basu168 BSGatlas UTR 885576 885628 . + . ID=BSGatlas-internal_UTR-252;Parent=BSGatlas-transcript-896;comment="internal_UTR" basu168 BSGatlas transcript 885613 885853 . + . ID=BSGatlas-transcript-897;color=#FF9900;Parent=BSGatlas-gene-980;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 885613 885628 . + . ID=BSGatlas-5'UTR-539;Parent=BSGatlas-transcript-897;comment="5'UTR" basu168 BSGatlas gene 885629 885808 . + . ID=BSGatlas-gene-980;color=#1E90FF;Name=sspH;locus_tag=BSU_08110,BSU08110 basu168 BSGatlas CDS 885629 885808 . + 0 ID=BSGatlas-gene-980_transcribed;color=#1E90FF;Name=sspH;Parent=BSGatlas-transcript-896,BSGatlas-transcript-897;comment="small acid-soluble spore protein";go="GO:0030435 sporulation resulting in formation of a cellular spore,GO:0030436 asexual sporulation,GO:0042601 endospore-forming forespore";subtiwiki_category="SW 4 Lifestyles,SW 4.2 Sporulation,SW 4.2.1 Sporulation proteins,SW 4.2.1.3 Small acid-soluble spore proteins";synonyms="sspH,yfjU";derives_from=BSGatlas-gene-980 basu168 BSGatlas transcript 885801 889747 . - . ID=BSGatlas-transcript-898;color=#B37924;Parent=BSGatlas-gene-987,BSGatlas-gene-986,BSGatlas-gene-985,BSGatlas-gene-983,BSGatlas-gene-982,BSGatlas-gene-981;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 885801 885843 . - . ID=BSGatlas-3'UTR-327;Parent=BSGatlas-transcript-898;comment="3'UTR" basu168 BSGatlas UTR 885809 885853 . + . ID=BSGatlas-3'UTR-328;Parent=BSGatlas-transcript-896,BSGatlas-transcript-897;comment="3'UTR" basu168 BSGatlas gene 885844 886173 . - . ID=BSGatlas-gene-981;color=#3474B3;Name=yfjF;locus_tag=BSU_08120,BSU08120 basu168 BSGatlas CDS 885844 886173 . - 0 ID=BSGatlas-gene-981_transcribed;color=#3474B3;Name=yfjF;Parent=BSGatlas-transcript-898;comment="putative membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yfjF";derives_from=BSGatlas-gene-981 basu168 BSGatlas UTR 886174 886222 . - . ID=BSGatlas-internal_UTR-253;Parent=BSGatlas-transcript-898;comment="internal_UTR" basu168 BSGatlas gene 886223 886681 . - . ID=BSGatlas-gene-982;color=#3474B3;Name=yfjE;locus_tag=BSU_08130,BSU08130 basu168 BSGatlas CDS 886223 886681 . - 0 ID=BSGatlas-gene-982_transcribed;color=#3474B3;Name=yfjE;Parent=BSGatlas-transcript-898;comment="putative integral inner membrane protein";go="GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yfjE";derives_from=BSGatlas-gene-982 basu168 BSGatlas UTR 886682 886774 . - . ID=BSGatlas-internal_UTR-254;Parent=BSGatlas-transcript-898;comment="internal_UTR" basu168 BSGatlas gene 886775 887332 . - . ID=BSGatlas-gene-983;color=#3474B3;Name=yfjD;locus_tag=BSU_08140,BSU08140 basu168 BSGatlas CDS 886775 887332 . - 0 ID=BSGatlas-gene-983_transcribed;color=#3474B3;Name=yfjD;Parent=BSGatlas-transcript-898;comment="putative integral inner membrane protein";go="GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yfjD";derives_from=BSGatlas-gene-983 basu168 BSGatlas gene 887222 887809 . + . ID=BSGatlas-gene-984;color=#CC0000;Name=S283;locus_tag=new_887222_887809 basu168 BSGatlas transcript 887222 887809 . + . ID=BSGatlas-transcript-900;color=#FF9900;Parent=BSGatlas-gene-984;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 887222 887809 . + . ID=BSGatlas-gene-984_transcribed;color=#CC0000;Name=S283;Parent=BSGatlas-transcript-900;synonyms="S283";derives_from=BSGatlas-gene-984 basu168 BSGatlas UTR 887333 887363 . - . ID=BSGatlas-internal_UTR-255;Parent=BSGatlas-transcript-898;comment="internal_UTR" basu168 BSGatlas gene 887364 888131 . - . ID=BSGatlas-gene-985;color=#3474B3;Name=yfjC;locus_tag=BSU_08150,BSU08150 basu168 BSGatlas CDS 887364 888131 . - 0 ID=BSGatlas-gene-985_transcribed;color=#3474B3;Name=yfjC;Parent=BSGatlas-transcript-898;comment="conserved protein of unknown function";subtiwiki_category="SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.5 Phosphorylation on a Ser residue,SW 6.7 Proteins of unknown function";synonyms="yfjC";derives_from=BSGatlas-gene-985 basu168 BSGatlas gene 888143 889366 . - . ID=BSGatlas-gene-986;color=#3474B3;Name=yfjB;locus_tag=BSU_08160,BSU08160 basu168 BSGatlas CDS 888143 889366 . - 0 ID=BSGatlas-gene-986_transcribed;color=#3474B3;Name=yfjB;Parent=BSGatlas-transcript-898;comment="putative phage protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfjB";derives_from=BSGatlas-gene-986 basu168 BSGatlas gene 889372 889686 . - . ID=BSGatlas-gene-987;color=#3474B3;Name=yfjA;locus_tag=BSU_08170,BSU08170 basu168 BSGatlas CDS 889372 889686 . - 0 ID=BSGatlas-gene-987_transcribed;color=#3474B3;Name=yfjA;Parent=BSGatlas-transcript-898;comment="conserved hypothetical protein";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfjA";derives_from=BSGatlas-gene-987 basu168 BSGatlas UTR 889687 889747 . - . ID=BSGatlas-5'UTR-540;Parent=BSGatlas-transcript-898;comment="5'UTR" basu168 BSGatlas transcript 889996 893837 . + . ID=BSGatlas-transcript-901;color=#FF9900;Parent=BSGatlas-gene-988,BSGatlas-gene-989,BSGatlas-gene-990;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 889996 890021 . + . ID=BSGatlas-5'UTR-542;Parent=BSGatlas-transcript-901;comment="5'UTR" basu168 BSGatlas gene 890022 891371 . + . ID=BSGatlas-gene-988;color=#1E90FF;Name=malA;locus_tag=BSU_08180,BSU08180 basu168 BSGatlas CDS 890022 891371 . + 0 ID=BSGatlas-gene-988_transcribed;color=#1E90FF;Name=malA;Parent=BSGatlas-transcript-901;comment="6-phospho-alpha-glucosidase";ec="3.2.1.122,EC-3.2.1.122";go="GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds,GO:0005975 carbohydrate metabolic process,GO:0008152 metabolic process,GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor,GO:0016787 hydrolase activity,GO:0016798 hydrolase activity, acting on glycosyl bonds,GO:0046872 metal ion binding,GO:0050081 maltose-6'-phosphate glucosidase activity,GO:0055114 oxidation-reduction process";kegg_pathways="Metabolic pathways (ko01100),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.22 Utilization of maltose,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="glvA,glvG,malA";derives_from=BSGatlas-gene-988 basu168 BSGatlas UTR 891372 891435 . + . ID=BSGatlas-internal_UTR-256;Parent=BSGatlas-transcript-901;comment="internal_UTR" basu168 BSGatlas transcript 891402 893837 . + . ID=BSGatlas-transcript-902;color=#FF9900;Parent=BSGatlas-gene-989,BSGatlas-gene-990;comment="Based on: BSGatlas" basu168 BSGatlas UTR 891402 891435 . + . ID=BSGatlas-5'UTR-543;Parent=BSGatlas-transcript-902;comment="5'UTR" basu168 BSGatlas gene 891436 892200 . + . ID=BSGatlas-gene-989;color=#1E90FF;Name=glvR;locus_tag=BSU_08190,BSU08190 basu168 BSGatlas CDS 891436 892200 . + 0 ID=BSGatlas-gene-989_transcribed;color=#1E90FF;Name=glvR;Parent=BSGatlas-transcript-901,BSGatlas-transcript-902;comment="transcriptional activator of the Mal operon";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005975 carbohydrate metabolic process,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0030246 carbohydrate binding";subtiwiki_category="SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.22 Utilization of maltose,SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other";synonyms="glvR,malR,yfiA";derives_from=BSGatlas-gene-989 basu168 BSGatlas gene 892215 893798 . + . ID=BSGatlas-gene-990;color=#1E90FF;Name=malP;locus_tag=BSU_08200,BSU08200 basu168 BSGatlas CDS 892215 893798 . + 0 ID=BSGatlas-gene-990_transcribed;color=#1E90FF;Name=malP;Parent=BSGatlas-transcript-901,BSGatlas-transcript-902;comment="phosphotransferase system (PTS) maltose-specificenzyme IICB component";ec="2.7.1.69";go="GO:0005351 carbohydrate:proton symporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008643 carbohydrate transport,GO:0008982 protein-N(PI)-phosphohistidine-sugar phosphotransferase activity,GO:0009401 phosphoenolpyruvate-dependent sugar phosphotransferase system,GO:0015992 NA,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0034219 carbohydrate transmembrane transport,GO:0034220 ion transmembrane transport";kegg_pathways="Phosphotransferase system (PTS) (ko02060),Starch and sucrose metabolism (ko00500)";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.2 Phosphotransferase system,SW 1.2.2.2 Sugar specific PTS proteins,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.22 Utilization of maltose,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.3 Phosphorylation on a Cys residue,SW 6.4.4 Phosphorylation on a His residue";synonyms="glvC,malP,yfiB";derives_from=BSGatlas-gene-990 basu168 BSGatlas UTR 893799 893837 . + . ID=BSGatlas-3'UTR-329;Parent=BSGatlas-transcript-901,BSGatlas-transcript-902;comment="3'UTR" basu168 BSGatlas transcript 893857 897470 . + . ID=BSGatlas-transcript-903;color=#FF9900;Parent=BSGatlas-gene-991,BSGatlas-gene-992;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 893857 893903 . + . ID=BSGatlas-5'UTR-544;Parent=BSGatlas-transcript-903;comment="5'UTR" basu168 BSGatlas gene 893904 895625 . + . ID=BSGatlas-gene-991;color=#1E90FF;Name=yfiB;locus_tag=BSU_08210,BSU08210 basu168 BSGatlas CDS 893904 895625 . + 0 ID=BSGatlas-gene-991_transcribed;color=#1E90FF;Name=yfiB;Parent=BSGatlas-transcript-903;comment="putative xenobiotic ABC transporter subunit(ATP-binding protein)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008152 metabolic process,GO:0015197 NA,GO:0015833 peptide transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity,GO:0042626 ATPase activity, coupled to transmembrane movement of substances,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.6 Exporters of unknown function,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfiB";derives_from=BSGatlas-gene-991 basu168 BSGatlas gene 895619 897433 . + . ID=BSGatlas-gene-992;color=#1E90FF;Name=yfiC;locus_tag=BSU_08220,BSU08220 basu168 BSGatlas CDS 895619 897433 . + 0 ID=BSGatlas-gene-992_transcribed;color=#1E90FF;Name=yfiC;Parent=BSGatlas-transcript-903;comment="putative ABC transporter (ATP-binding protein)";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity,GO:0042626 ATPase activity, coupled to transmembrane movement of substances,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.6 Exporters of unknown function,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfiC";derives_from=BSGatlas-gene-992 basu168 BSGatlas UTR 897434 897470 . + . ID=BSGatlas-3'UTR-330;Parent=BSGatlas-transcript-903;comment="3'UTR" basu168 BSGatlas transcript 897540 898916 . + . ID=BSGatlas-transcript-904;color=#FF9900;Parent=BSGatlas-gene-993,BSGatlas-gene-994;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 897540 897587 . + . ID=BSGatlas-5'UTR-545;Parent=BSGatlas-transcript-904;comment="5'UTR" basu168 BSGatlas gene 897588 897992 . + . ID=BSGatlas-gene-993;color=#1E90FF;Name=catD;locus_tag=BSU_08230,BSU08230 basu168 BSGatlas CDS 897588 897992 . + 0 ID=BSGatlas-gene-993_transcribed;color=#1E90FF;Name=catD;Parent=BSGatlas-transcript-904;comment="catechol-2,3-dioxygenase membrane subunit";ec="1.13.11.2,EC-1.13.11.2";go="GO:0005886 plasma membrane,GO:0009636 response to toxic substance,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016491 oxidoreductase activity,GO:0019439 aromatic compound catabolic process,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 2 Metabolism,SW 2.7 Detoxification reactions,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="catD,yfiD";derives_from=BSGatlas-gene-993 basu168 BSGatlas UTR 897993 898009 . + . ID=BSGatlas-internal_UTR-257;Parent=BSGatlas-transcript-904;comment="internal_UTR" basu168 BSGatlas gene 898010 898867 . + . ID=BSGatlas-gene-994;color=#1E90FF;Name=catE;locus_tag=BSU_08240,BSU08240 basu168 BSGatlas CDS 898010 898867 . + 0 ID=BSGatlas-gene-994_transcribed;color=#1E90FF;Name=catE;Parent=BSGatlas-transcript-904;comment="catechol-2,3-dioxygenase subunit";ec="1.13.11.2,EC-1.13.11.2";go="GO:0003824 catalytic activity,GO:0006725 cellular aromatic compound metabolic process,GO:0008198 ferrous iron binding,GO:0009636 response to toxic substance,GO:0016491 oxidoreductase activity,GO:0018577 catechol 2,3-dioxygenase activity,GO:0019439 aromatic compound catabolic process,GO:0046872 metal ion binding,GO:0051213 dioxygenase activity,GO:0055114 oxidation-reduction process";kegg_pathways="Benzoate degradation (ko00362),Chlorocyclohexane and chlorobenzene degradation (ko00361),Degradation of aromatic compounds (ko01220),Metabolic pathways (ko01100),Microbial metabolism in diverse environments (ko01120),Xylene degradation (ko00622)";subtiwiki_category="SW 2 Metabolism,SW 2.7 Detoxification reactions,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.8 Resistance against oxidative and electrophile stress";synonyms="catE,yfiE";derives_from=BSGatlas-gene-994 basu168 BSGatlas UTR 898868 898916 . + . ID=BSGatlas-3'UTR-331;Parent=BSGatlas-transcript-904;comment="3'UTR" basu168 BSGatlas gene 898961 899905 . + . ID=BSGatlas-gene-995;color=#1E90FF;Name=yfiF;locus_tag=BSU_08250,BSU08250 basu168 BSGatlas transcript 898961 899905 . + . ID=BSGatlas-transcript-905;color=#FF9900;Parent=BSGatlas-gene-995;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas CDS 898961 899905 . + 0 ID=BSGatlas-gene-995_transcribed;color=#1E90FF;Name=yfiF;Parent=BSGatlas-transcript-905;comment="putative transcriptional regulator (AraC/XylSfamily; cupin family)";go="GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0043565 sequence-specific DNA binding";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yfiF";derives_from=BSGatlas-gene-995 basu168 BSGatlas transcript 900080 903743 . + . ID=BSGatlas-transcript-906;color=#FF9900;Parent=BSGatlas-gene-996,BSGatlas-gene-997,BSGatlas-gene-998;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas gene 900080 901528 . + . ID=BSGatlas-gene-996;color=#1E90FF;Name=yfiG;locus_tag=BSU_08260,BSU08260 basu168 BSGatlas CDS 900080 901528 . + 0 ID=BSGatlas-gene-996_transcribed;color=#1E90FF;Name=yfiG;Parent=BSGatlas-transcript-906;comment="putative sugar/proton transporter";go="GO:0005215 transporter activity,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0022857 transmembrane transporter activity,GO:0022891 NA,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.3 Carbohydrate transporter,SW 2 Metabolism,SW 2.2 Carbon metabolism,SW 2.2.2 Utilization of specific carbon sources,SW 2.2.2.16 Utilization of inositol,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfiG";derives_from=BSGatlas-gene-996 basu168 BSGatlas UTR 901529 901554 . + . ID=BSGatlas-internal_UTR-258;Parent=BSGatlas-transcript-906;comment="internal_UTR" basu168 BSGatlas gene 901555 902496 . + . ID=BSGatlas-gene-997;color=#1E90FF;Name=yfiH;locus_tag=BSU_08270,BSU08270 basu168 BSGatlas CDS 901555 902496 . + 0 ID=BSGatlas-gene-997_transcribed;color=#1E90FF;Name=yfiH;Parent=BSGatlas-transcript-906;comment="putative sugar-phosphate epimerase/isomerase";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfiH";derives_from=BSGatlas-gene-997 basu168 BSGatlas gene 902506 903687 . + . ID=BSGatlas-gene-998;color=#1E90FF;Name=yfiI;locus_tag=BSU_08280,BSU08280 basu168 BSGatlas CDS 902506 903687 . + 0 ID=BSGatlas-gene-998_transcribed;color=#1E90FF;Name=yfiI;Parent=BSGatlas-transcript-906;comment="putative oxidoreductase";ec="1.-.-.-";go="GO:0016491 oxidoreductase activity,GO:0055114 oxidation-reduction process";subtiwiki_category="SW 6 Groups of genes,SW 6.7 Proteins of unknown function";synonyms="yfiI";derives_from=BSGatlas-gene-998 basu168 BSGatlas UTR 903688 903743 . + . ID=BSGatlas-3'UTR-332;Parent=BSGatlas-transcript-906;comment="3'UTR" basu168 BSGatlas transcript 903786 905736 . + . ID=BSGatlas-transcript-907;color=#FF9900;Parent=BSGatlas-gene-999,BSGatlas-gene-1000;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 903786 903810 . + . ID=BSGatlas-5'UTR-546;Parent=BSGatlas-transcript-907;comment="5'UTR" basu168 BSGatlas gene 903811 905013 . + . ID=BSGatlas-gene-999;color=#1E90FF;Name=lnrJ;locus_tag=BSU_08290,BSU08290 basu168 BSGatlas CDS 903811 905013 . + 0 ID=BSGatlas-gene-999_transcribed;color=#1E90FF;Name=lnrJ;Parent=BSGatlas-transcript-907;comment="two-component sensor histidine kinase [LinK](linearmycin resistance, biofilm formation)";go="GO:0000155 phosphorelay sensor kinase activity,GO:0000160 phosphorelay signal transduction system,GO:0000166 nucleotide binding,GO:0004673 protein histidine kinase activity,GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016301 kinase activity,GO:0016310 phosphorylation,GO:0016740 transferase activity,GO:0018106 peptidyl-histidine phosphorylation,GO:0023014 signal transduction by protein phosphorylation,GO:0046983 protein dimerization activity";subtiwiki_category="SW 3 Information processing,SW 3.3 Protein synthesis, modification and degradation,SW 3.3.4 Protein modification,SW 3.3.4.2 Protein kinases,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.2 Control of two-component response regulators,SW 3.4.2.2.1 Two-component sensor kinase,SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.4 Phosphoproteins,SW 6.4.4 Phosphorylation on a His residue";synonyms="lnrJ,yfiJ";derives_from=BSGatlas-gene-999 basu168 BSGatlas gene 905010 905672 . + . ID=BSGatlas-gene-1000;color=#1E90FF;Name=lnrK;locus_tag=BSU_08300,BSU08300 basu168 BSGatlas CDS 905010 905672 . + 0 ID=BSGatlas-gene-1000_transcribed;color=#1E90FF;Name=lnrK;Parent=BSGatlas-transcript-907;comment="two-component response regulator [LinJ](linearmycin resistance, biofilm formation)";go="GO:0000156 phosphorelay response regulator activity,GO:0000160 phosphorelay signal transduction system,GO:0003677 DNA binding,GO:0003700 DNA-binding transcription factor activity,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:0035556 intracellular signal transduction";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.1 Two-component system response regulators,SW 6 Groups of genes,SW 6.4 Phosphoproteins,SW 6.4.2 Phosphorylation on an Asp residue";synonyms="lnrK,yfiK";derives_from=BSGatlas-gene-1000 basu168 BSGatlas UTR 905673 905736 . + . ID=BSGatlas-3'UTR-333;Parent=BSGatlas-transcript-907;comment="3'UTR" basu168 BSGatlas transcript 905816 909125 . + . ID=BSGatlas-transcript-908;color=#FF9900;Parent=BSGatlas-gene-1001,BSGatlas-gene-1002,BSGatlas-gene-1003;comment="Based on: SubtiWiki" basu168 BSGatlas gene 905816 906751 . + . ID=BSGatlas-gene-1001;color=#1E90FF;Name=lnrL;locus_tag=BSU_08310,BSU08310 basu168 BSGatlas CDS 905816 906751 . + 0 ID=BSGatlas-gene-1001_transcribed;color=#1E90FF;Name=lnrL;Parent=BSGatlas-transcript-908;comment="ABC transporter (ATP-binding protein) biofilmformation";go="GO:0000166 nucleotide binding,GO:0005524 ATP binding,GO:0006810 transport,GO:0008152 metabolic process,GO:0016887 ATPase activity,GO:0017111 nucleoside-triphosphatase activity";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.1 Efflux of antibiotics,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lnrL,yfiL";derives_from=BSGatlas-gene-1001 basu168 BSGatlas gene 906764 907954 . + . ID=BSGatlas-gene-1002;color=#1E90FF;Name=lnrM;locus_tag=BSU_08320,BSU08320 basu168 BSGatlas CDS 906764 907954 . + 0 ID=BSGatlas-gene-1002_transcribed;color=#1E90FF;Name=lnrM;Parent=BSGatlas-transcript-908;comment="ABC transporter (permease) biofilm formation";go="GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0042626 ATPase activity, coupled to transmembrane movement of substances,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.1 Efflux of antibiotics,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lnrM,yfiM";derives_from=BSGatlas-gene-1002 basu168 BSGatlas gene 907968 909125 . + . ID=BSGatlas-gene-1003;color=#1E90FF;Name=lnrN;locus_tag=BSU_08330,BSU08330 basu168 BSGatlas CDS 907968 909125 . + 0 ID=BSGatlas-gene-1003_transcribed;color=#1E90FF;Name=lnrN;Parent=BSGatlas-transcript-908;comment="ABC transporter (permease) biofilm formation";go="GO:0005524 ATP binding,GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0042626 ATPase activity, coupled to transmembrane movement of substances,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.1 ABC transporters,SW 1.2.1.2 Exporters,SW 1.2.1.2.1 Efflux of antibiotics,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="lnrN,yfiN";derives_from=BSGatlas-gene-1003 basu168 BSGatlas transcript 909115 909826 . - . ID=BSGatlas-transcript-909;color=#B37924;Parent=BSGatlas-gene-1004;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 909115 909197 . - . ID=BSGatlas-3'UTR-334;Parent=BSGatlas-transcript-909;comment="3'UTR" basu168 BSGatlas gene 909198 909746 . - . ID=BSGatlas-gene-1004;color=#3474B3;Name=padR;locus_tag=BSU_08340,BSU08340 basu168 BSGatlas CDS 909198 909746 . - 0 ID=BSGatlas-gene-1004_transcribed;color=#3474B3;Name=padR;Parent=BSGatlas-transcript-909;comment="transcriptional regulator of phenolic aciddecarboxylase";go="GO:0000985 bacterial-type RNA polymerase core promoter sequence-specific DNA binding,GO:0005737 cytoplasm,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated,GO:2000143 negative regulation of DNA-templated transcription, initiation";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.5 Transcription factors/ other,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.10 Resistance against other toxic compounds (nitric oxide, phenolic acids, flavonoids, oxalate)";synonyms="padR,yfiO";derives_from=BSGatlas-gene-1004 basu168 BSGatlas UTR 909747 909826 . - . ID=BSGatlas-5'UTR-547;Parent=BSGatlas-transcript-909;comment="5'UTR" basu168 BSGatlas transcript 909975 910705 . + . ID=BSGatlas-transcript-911;color=#FF9900;Parent=BSGatlas-gene-1005;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 909975 910651 . + . ID=BSGatlas-transcript-910;color=#FF9900;Parent=BSGatlas-gene-1005;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 909975 910018 . + . ID=BSGatlas-5'UTR-548;Parent=BSGatlas-transcript-910,BSGatlas-transcript-911;comment="5'UTR" basu168 BSGatlas gene 910019 910651 . + . ID=BSGatlas-gene-1005;color=#1E90FF;Name=lipB;locus_tag=BSU_08350,BSU08350 basu168 BSGatlas CDS 910019 910651 . + 0 ID=BSGatlas-gene-1005_transcribed;color=#1E90FF;Name=lipB;Parent=BSGatlas-transcript-910,BSGatlas-transcript-911;comment="secreted esterase / acylglycerol lipase";ec="3.1.1.3,EC-3.1.1.3";go="GO:0004806 triglyceride lipase activity,GO:0005576 extracellular region,GO:0006629 lipid metabolic process,GO:0016042 lipid catabolic process,GO:0016787 hydrolase activity";kegg_pathways="Glycerolipid metabolism (ko00561),Metabolic pathways (ko01100)";subtiwiki_category="SW 2 Metabolism,SW 2.4 Lipid metabolism,SW 2.4.1 Utilization of lipids,SW 2.4.1.4 Utilization of lipids/ other,SW 6 Groups of genes,SW 6.12 Secreted proteins";synonyms="lipB,yfiP";derives_from=BSGatlas-gene-1005 basu168 BSGatlas UTR 910652 910705 . + . ID=BSGatlas-3'UTR-335;Parent=BSGatlas-transcript-911;comment="3'UTR" basu168 BSGatlas transcript 910795 911973 . + . ID=BSGatlas-transcript-912;color=#FF9900;Parent=BSGatlas-gene-1006;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 910795 910839 . + . ID=BSGatlas-5'UTR-549;Parent=BSGatlas-transcript-912;comment="5'UTR" basu168 BSGatlas gene 910840 911928 . + . ID=BSGatlas-gene-1006;color=#1E90FF;Name=yfiQ;locus_tag=BSU_08360,BSU08360 basu168 BSGatlas CDS 910840 911928 . + 0 ID=BSGatlas-gene-1006_transcribed;color=#1E90FF;Name=yfiQ;Parent=BSGatlas-transcript-912;comment="acetyl-glucosamine metabolite exporter componentinvolved in biofilm formation";go="GO:0005886 plasma membrane,GO:0008152 metabolic process,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0016740 transferase activity,GO:0016746 transferase activity, transferring acyl groups,GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups";subtiwiki_category="SW 6 Groups of genes,SW 6.2 Membrane proteins,SW 6.7 Proteins of unknown function";synonyms="yfiQ";derives_from=BSGatlas-gene-1006 basu168 BSGatlas gene 911330 911718 . - . ID=BSGatlas-gene-1007;color=#8F1D1D;Name=S286;locus_tag=new_911330_911718_c basu168 BSGatlas transcript 911330 911718 . - . ID=BSGatlas-transcript-913;color=#B37924;Parent=BSGatlas-gene-1007;comment="Based on: BSGatlas" basu168 BSGatlas ncRNA 911330 911718 . - . ID=BSGatlas-gene-1007_transcribed;color=#8F1D1D;Name=S286;Parent=BSGatlas-transcript-913;synonyms="S286";derives_from=BSGatlas-gene-1007 basu168 BSGatlas transcript 911921 913852 . - . ID=BSGatlas-transcript-915;color=#B37924;Parent=BSGatlas-gene-1009,BSGatlas-gene-1008;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas transcript 911921 912620 . - . ID=BSGatlas-transcript-914;color=#B37924;Parent=BSGatlas-gene-1008;comment="Based on: SubtiWiki" basu168 BSGatlas UTR 911921 911963 . - . ID=BSGatlas-3'UTR-336;Parent=BSGatlas-transcript-914,BSGatlas-transcript-915;comment="3'UTR" basu168 BSGatlas UTR 911929 911973 . + . ID=BSGatlas-3'UTR-337;Parent=BSGatlas-transcript-912;comment="3'UTR" basu168 BSGatlas gene 911964 912581 . - . ID=BSGatlas-gene-1008;color=#3474B3;Name=yfiR;locus_tag=BSU_08370,BSU08370 basu168 BSGatlas CDS 911964 912581 . - 0 ID=BSGatlas-gene-1008_transcribed;color=#3474B3;Name=yfiR;Parent=BSGatlas-transcript-914,BSGatlas-transcript-915;comment="transcriptional regulator (TetR/AcrR family)";go="GO:0003677 DNA binding,GO:0006351 transcription, DNA-templated,GO:0006355 regulation of transcription, DNA-templated";subtiwiki_category="SW 3 Information processing,SW 3.4 Regulation of gene expression,SW 3.4.2 Transcription factors and their control,SW 3.4.2.6 Transcription factor/ other/ based on similarity";synonyms="yfiR";derives_from=BSGatlas-gene-1008 basu168 BSGatlas gene 912547 913800 . - . ID=BSGatlas-gene-1009;color=#3474B3;Name=yfiS;locus_tag=BSU_08380,BSU08380 basu168 BSGatlas CDS 912547 913800 . - 0 ID=BSGatlas-gene-1009_transcribed;color=#3474B3;Name=yfiS;Parent=BSGatlas-transcript-915;comment="putative efflux transporter";go="GO:0005886 plasma membrane,GO:0006810 transport,GO:0016020 membrane,GO:0016021 integral component of membrane,GO:0055085 transmembrane transport";subtiwiki_category="SW 1 Cellular processes,SW 1.2 Transporters,SW 1.2.4 Transporters/ other,SW 1.2.4.12 Other transporters,SW 4 Lifestyles,SW 4.3 Coping with stress,SW 4.3.14 Resistance against toxins/ antibiotics/ based on similarity,SW 6 Groups of genes,SW 6.2 Membrane proteins";synonyms="yfiS";derives_from=BSGatlas-gene-1009 basu168 BSGatlas UTR 912582 912620 . - . ID=BSGatlas-5'UTR-550;Parent=BSGatlas-transcript-914;comment="5'UTR" basu168 BSGatlas UTR 913801 913852 . - . ID=BSGatlas-5'UTR-551;Parent=BSGatlas-transcript-915;comment="5'UTR" basu168 BSGatlas transcript 913884 914632 . + . ID=BSGatlas-transcript-916;color=#FF9900;Parent=BSGatlas-gene-1010;comment="Based on: BsubCyc,DBTBS,SubtiWiki" basu168 BSGatlas UTR 913884 913923 . + . ID=BSGatlas-5'UTR-552;Parent=BSGatlas-transcript-916;comment="5'UTR" basu168 BSGatlas gene 913924 914460 . + . ID=BSGatlas-gene-1010;color=#1E90FF;Name=bstA;locus_tag=BSU_08390,BSU08390 basu168 BSGatlas CDS 913924 914460 . + 0 ID=BSGatlas-gene-1010_transcribed;color=#1E90FF;Name=bstA;Parent=BSGatlas-transcript-916;comment="bacillithiol S-transferase";go="GO:0005737 cytoplasm,GO:0008152 metabolic process,GO:0008270 zinc ion binding,GO:0016787 hydrolase acti