Non-Coding RNA Search
Information>
chr6chr7chr13chr14chr19chr20chr21chr22chrXchrY

chr6


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 146 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr6_4848095-4851013.sub_0 - Chr13_35261530-35262869.sub_0 TRANS 0 609 NO NO NO NO
hgchr6_33735820-33736400 - Chr17_25676268-25676670 TRANS 0 686 NO NO NO NO
hgchr6_5468026-5469294 - Chr13_35761885-35762488 TRANS 0 663 NO NO NO NO
hgchr6_6444218-6444699 - Chr13_36685402-36686080 NOTRANS 0 624 NO NO NO NO
hgchr6_33761064-33760708 - Chr17_25700712-25700485 TRANS 0.001 402 YES NO NO NO
hgchr6_168716192-168717883.sub_0 - Chr17_13185794-13186621.sub_0 TRANS 0.001 571 NO NO NO NO
hgchr6_5055755-5056068 - Chr13_35418385-35418809 NOTRANS 0.001 389 NO NO NO NO
hgchr6_168675123-168676697.sub_0 - Chr17_13156602-13157500.sub_1 NOTRANS 0.001 567 NO NO NO NO
hgchr6_15598107-15600447.sub_3 - Chr13_44363305-44363672.sub_0 NOTRANS 0.001 441 YES NO NO NO
hgchr6_6350467-6350643.sub_0 - Chr13_36582571-36583680.sub_1 NOTRANS 0.001 394 NO NO NO NO
hgchr6_170010088-170011801.sub_1 - Chr17_13882379-13883192.sub_0 TRANS 0.002 551 YES NO NO NO
hgchr6_168482618-168483292 - Chr17_13038145-13039037 NOTRANS 0.002 530 NO NO NO NO
hgchr6_118410298-118410750 - Chr10_52803061-52803304 NOTRANS 0.002 526 NO NO NO NO
hgchr6_167317084-167315662.sub_0 - ChrUnRandom_90678850-90678520.sub_0 TRANS 0.002 460 NO NO NO NO
hgchr6_12179644-12179444 - Chr13_41559335-41559018 TRANS 0.002 293 NO NO NO NO
hgchr6_157778873-157779070 - Chr17_5450714-5451423 TRANS 0.003 376 YES NO NO NO
hgchr6_157953595-157955249.sub_0 - Chr17_5623364-5623640.sub_0 TRANS 0.003 425 NO NO NO NO
hgchr6_167096268-167097064 - Chr17_7215223-7215881 TRANS 0.003 454 YES NO NO NO
hgchr6_166873297-166874511 - Chr17_7080369-7081117 TRANS 0.003 460 YES YES NO NO
hgchr6_37875257-37875943 - Chr17_28588441-28588604 NOTRANS 0.003 518 NO NO NO YES
hgchr6_156985808-156986124 - Chr17_4734307-4734570 NOTRANS 0.003 310 NO NO NO NO
hgchr6_75373600-75374826.sub_0 - Chr9_79616817-79617513.sub_0 NOTRANS 0.003 423 NO NO NO NO
hgchr6_156974775-156975676 - Chr17_4722387-4722642 TRANS 0.004 361 NO NO NO NO
hgchr6_33993408-33993613 - Chr17_25936305-25936475 TRANS 0.004 392 YES NO NO NO
hgchr6_33736400-33735820 - Chr17_25676670-25676268 TRANS 0.004 376 NO NO NO NO
hgchr6_167940455-167939341.sub_0 - Chr17_12381179-12380312.sub_0 TRANS 0.004 531 NO NO NO NO
hgchr6_37547029-37547593 - Chr17_28296938-28297225 NOTRANS 0.004 427 NO NO NO NO
hgchr6_170495228-170496160 - Chr17_14174176-14174761 TRANS 0.005 450 NO NO NO NO
hgchr6_75374826-75373600.sub_0 - Chr9_79617513-79616817.sub_0 NOTRANS 0.005 356 NO NO NO NO
hgchr6_170534708-170532519.sub_2 - Chr17_14214823-14212790.sub_0 TRANS 0.005 665 NO NO NO NO
hgchr6_170286809-170285816.sub_0 - Chr17_14054100-14052592.sub_0 TRANS 0.005 509 NO NO NO NO
hgchr6_36826390-36827176 - Chr17_27766762-27767047 TRANS 0.006 463 NO NO NO NO
hgchr6_77413538-77412895 - Chr9_81325132-81324979 NOTRANS 0.006 267 NO NO NO NO
hgchr6_50439912-50440668 - Chr1_18811851-18812418 NOTRANS 0.006 351 NO NO NO NO
hgchr6_12194330-12195014 - Chr13_41566233-41566430 NOTRANS 0.006 299 YES NO YES NO
hgchr6_50274379-50275121 - Chr1_18648576-18648931 NOTRANS 0.006 308 NO NO NO NO
hgchr6_38254905-38255586 - Chr17_28824507-28824849 TRANS 0.006 455 NO YES NO NO
hgchr6_169009021-169008705 - Chr17_13326454-13326134 NOTRANS 0.006 439 YES NO NO YES
hgchr6_35494376-35494807 - Chr17_26882976-26884017 TRANS 0.007 597 NO NO YES NO
hgchr6_169603580-169604342 - Chr17_13655171-13655931 NOTRANS 0.007 401 NO NO NO YES
hgchr6_168717883-168716192.sub_2 - Chr17_13186621-13185794.sub_1 TRANS 0.007 493 NO NO NO NO
hgchr6_34059811-34060688 - Chr17_25991914-25992619 TRANS 0.007 502 NO NO NO NO
hgchr6_647135-646619 - Chr13_30357406-30357146 TRANS 0.007 349 NO NO NO NO
hgchr6_169240868-169241276 - Chr17_13459586-13460383 NOTRANS 0.008 432 NO NO NO NO
hgchr6_158057218-158057751 - Chr17_5697087-5697515 NOTRANS 0.008 354 NO YES NO NO
hgchr6_31582748-31582030 - Chr7_9910538-9909884 TRANS 0.008 485 NO NO NO NO
hgchr6_1865302-1864449.sub_1 - Chr13_31474603-31474346.sub_0 NOTRANS 0.008 241 NO NO NO NO
hgchr6_168274653-168275962 - Chr17_19717112-19718010 NOTRANS 0.008 560 YES NO NO NO
hgchr6_166853248-166853640 - Chr17_7070076-7070476 TRANS 0.008 362 NO NO NO NO
hgchr6_167077374-167078715 - Chr17_7204240-7204420 NOTRANS 0.008 314 NO NO NO NO
hgchr6_170296437-170294737.sub_0 - Chr17_14057286-14055333.sub_0 TRANS 0.008 598 NO NO NO NO
hgchr6_169941358-169940188.sub_0 - Chr17_13859162-13858749.sub_0 TRANS 0.008 553 NO NO NO NO
hgchr6_3329894-3329179 - Chr13_33712169-33711931 TRANS 0.008 365 YES NO NO NO
hgchr6_155339309-155339882 - Chr17_3272522-3272844 TRANS 0.008 423 NO NO NO NO
hgchr6_170478495-170477756 - Chr17_14168227-14167544 TRANS 0.009 437 NO YES NO YES
hgchr6_1050900-1050675 - Chr13_30751068-30750824 TRANS 0.009 229 NO NO YES YES
hgchr6_168589359-168588923 - Chr17_13097230-13096987 NOTRANS 0.009 350 NO NO NO NO
hgchr6_120185291-120186232 - Chr10_54695240-54695957 TRANS 0.009 400 NO NO NO NO
hgchr6_120855940-120856256 - Chr10_55372844-55373238 TRANS 0.009 269 NO NO NO NO
hgchr6_34660066-34659355.sub_0 - Chr17_26337415-26336484.sub_0 TRANS 0.01 499 YES NO NO NO
hgchr6_17867209-17866413 - Chr13_46243104-46242452 NOTRANS 0.01 370 YES NO NO NO
hgchr6_170532519-170534708.sub_1 - Chr17_14212790-14214823.sub_2 TRANS 0.011 530 YES YES NO NO
hgchr6_52637186-52636882.sub_0 - Chr1_21375585-21374768.sub_0 TRANS 0.011 457 NO NO NO NO
hgchr6_36553871-36554682 - Chr17_27556974-27557290 TRANS 0.011 504 NO NO NO NO
hgchr6_38851438-38848871.sub_3 - Chr17_29265397-29265289.sub_0 NOTRANS 0.011 297 NO NO NO NO
hgchr6_170523380-170523767 - Chr17_14199277-14199516 NOTRANS 0.011 558 YES NO NO YES
hgchr6_38255586-38254905 - Chr17_28824849-28824507 TRANS 0.011 402 NO YES NO NO
hgchr6_16051845-16052380 - Chr13_44696896-44697205 NOTRANS 0.011 334 NO NO NO NO
hgchr6_7207876-7207309.sub_0 - Chr13_37407110-37406026.sub_0 TRANS 0.012 398 NO NO NO NO
hgchr6_81898492-81898006 - Chr9_85185380-85185150 NOTRANS 0.012 242 NO NO NO NO
hgchr6_34552962-34552526 - Chr17_26254827-26254551 NOTRANS 0.012 381 NO NO NO NO
hgchr6_7824999-7824831 - Chr13_37940674-37940328 NOTRANS 0.012 368 YES NO NO NO
hgchr6_167159331-167160054 - Chr17_7267605-7267822 TRANS 0.012 345 NO NO NO NO
hgchr6_168192359-168194545.sub_0 - Chr17_12838427-12839378.sub_0 NOTRANS 0.013 452 NO NO NO NO
hgchr6_13361110-13362155 - Chr13_42562645-42563041 NOTRANS 0.013 408 NO NO NO NO
hgchr6_167678628-167679272 - Chr17_6965337-6965598 TRANS 0.013 347 YES NO NO NO
hgchr6_168744976-168743964.sub_0 - Chr17_13205505-13205267.sub_0 TRANS 0.013 294 NO NO NO NO
hgchr6_170369760-170370222.sub_0 - Chr17_14106820-14108385.sub_1 TRANS 0.014 548 NO NO NO NO
hgchr6_297805-296803.sub_0 - Chr13_30091870-30091390.sub_0 TRANS 0.014 479 YES NO NO YES
hgchr6_158583955-158584240 - Chr17_6035808-6036219 NOTRANS 0.014 278 YES YES YES NO
hgchr6_3697827-3698351 - Chr13_34085687-34086334 TRANS 0.014 328 YES NO NO NO
hgchr6_170523079-170523341 - Chr17_14199277-14199516 TRANS 0.014 454 NO NO NO YES
hgchr6_18070253-18069084.sub_0 - Chr13_46399260-46399084.sub_0 NOTRANS 0.014 265 NO NO NO YES
hgchr6_88637915-88639055 - Chr4Random_2611697-2612537 TRANS 0.015 430 NO NO NO NO
hgchr6_33966844-33967868 - Chr17_25912706-25912947 TRANS 0.015 281 YES YES NO NO
hgchr6_156318225-156318619 - Chr17_4136430-4136664 NOTRANS 0.015 240 NO NO NO YES
hgchr6_121862933-121862786 - Chr10_56479528-56479313 NOTRANS 0.015 332 NO YES NO NO
hgchr6_170285816-170286809.sub_1 - Chr17_14052592-14054100.sub_0 TRANS 0.016 451 NO NO NO NO
hgchr6_168743964-168744976 - Chr17_13205267-13205505 NOTRANS 0.016 336 NO NO NO NO
hgchr6_3698351-3697827 - Chr13_34086334-34085687 TRANS 0.016 312 YES NO NO YES
hgchr6_14460575-14461446 - Chr13_43441890-43442257 TRANS 0.017 403 NO NO NO NO
hgchr6_158978631-158978788 - Chr17_6243246-6243557 NOTRANS 0.017 366 NO YES NO NO
hgchr6_35527312-35528301 - Chr17_26902535-26902949 TRANS 0.017 436 YES NO NO NO
hgchr6_150336329-150335665 - ChrUnRandom_59352909-59352338 TRANS 0.017 402 YES NO NO NO
hgchr6_33839485-33838946 - Chr17_25771285-25771112 TRANS 0.018 365 NO NO NO YES
hgchr6_167105765-167106652 - Chr17_7221382-7222436 TRANS 0.018 415 NO NO NO NO
hgchr6_9346779-9346216 - Chr13_39078949-39078819 NOTRANS 0.018 329 NO NO NO NO
hgchr6_9183891-9183328 - Chr13_39078949-39078819 NOTRANS 0.018 329 NO NO NO NO
hgchr6_4998187-4997999 - Chr13_35385935-35385497 NOTRANS 0.018 311 NO NO NO NO
hgchr6_35012014-35012233 - Chr17_26535928-26536087 NOTRANS 0.019 403 YES NO NO NO
hgchr6_33772916-33772574 - Chr17_25710887-25710727 TRANS 0.019 363 YES NO NO YES
hgchr6_34319642-34319898 - Chr17_26149968-26150287 TRANS 0.019 311 YES YES NO YES
hgchr6_170270490-170270112.sub_0 - Chr17_14049239-14048362.sub_0 NOTRANS 0.02 480 NO NO NO YES
hgchr6_33466946-33467154 - Chr17_25504159-25504377 NOTRANS 0.02 182 NO NO NO NO
hgchr6_37091884-37091626 - Chr17_27976224-27975662 TRANS 0.02 381 YES NO NO NO
hgchr6_305317-304097.sub_0 - Chr13_30097830-30097290.sub_0 TRANS 0.021 425 YES NO NO NO
hgchr6_27406635-27406411 - Chr13_21862081-21861777 NOTRANS 0.021 337 NO NO NO NO
hgchr6_4800518-4799322.sub_0 - Chr13_35234006-35233467.sub_0 TRANS 0.021 422 NO NO NO NO
hgchr6_167691980-167692754 - Chr17_6972778-6973107 TRANS 0.021 366 NO NO NO YES
hgchr6_169667033-169666151.sub_0 - Chr17_13695556-13694240.sub_0 TRANS 0.021 381 NO NO NO NO
hgchr6_169666151-169667033 - Chr17_13694240-13695556 NOTRANS 0.023 345 NO NO NO NO
hgchr6_31488467-31490881.sub_2 - Chr7_9924270-9925120.sub_0 NOTRANS 0.024 416 NO NO NO NO
hgchr6_51547759-51547560.sub_0 - Chr1_20217101-20216178.sub_0 NOTRANS 0.024 244 NO NO NO NO
hgchr6_169103671-169102786.sub_0 - Chr17_13383853-13383613.sub_0 TRANS 0.024 470 NO NO NO NO
hgchr6_567143-568727.sub_1 - Chr13_30308778-30309624.sub_0 NOTRANS 0.024 357 YES NO NO NO
hgchr6_36827176-36826390 - Chr17_27767047-27766762 NOTRANS 0.024 427 NO NO NO NO
hgchr6_36700542-36700890 - Chr17_27646736-27646901 TRANS 0.024 298 NO NO NO NO
hgchr6_1020144-1019833.sub_0 - Chr13_30714218-30713247.sub_0 NOTRANS 0.024 312 NO NO NO NO
hgchr6_5341860-5342025 - Chr13_35667488-35667754 TRANS 0.025 296 NO NO NO NO
hgchr6_170011801-170010088.sub_0 - Chr17_13883192-13882379.sub_0 TRANS 0.025 428 YES NO NO NO
hgchr6_37715002-37714559 - Chr17_28435310-28435100 TRANS 0.025 345 NO NO NO NO
hgchr6_34543924-34544166 - Chr17_26245733-26246366 NOTRANS 0.025 362 NO YES NO NO
hgchr6_15624221-15625365 - Chr13_44380045-44380426 TRANS 0.025 420 NO YES NO NO
hgchr6_34168708-34169137 - Chr17_26062341-26062562 TRANS 0.025 360 NO NO NO NO
hgchr6_17415669-17415420 - Chr13_45934079-45933830 NOTRANS 0.026 159 NO NO NO NO
hgchr6_1153103-1152864 - Chr13_30846285-30845771 TRANS 0.026 235 NO NO NO NO
hgchr6_296803-297805 - Chr13_30091390-30091870 TRANS 0.026 446 NO NO NO NO
hgchr6_168140111-168139468 - Chr17_12788130-12787833 TRANS 0.026 274 YES NO NO NO
hgchr6_170079271-170079842 - Chr17_13925287-13925482 TRANS 0.027 311 NO NO NO NO
hgchr6_167220659-167221145 - ChrUnRandom_77876055-77876217 TRANS 0.027 388 NO NO NO NO
hgchr6_4836449-4836597 - Chr13_35252168-35252345 TRANS 0.027 291 NO NO NO NO
hgchr6_156081819-156082991 - Chr17_3934119-3934540 NOTRANS 0.027 282 NO NO NO NO
hgchr6_26587108-26588091.sub_0 - Chr11_58542011-58543297.sub_0 NOTRANS 0.027 248 YES NO NO NO
hgchr6_4080481-4079043.sub_0 - Chr13_34426001-34425687.sub_0 TRANS 0.028 339 YES YES NO YES
hgchr6_66489489-66488934 - Chr1_28990043-28989768 NOTRANS 0.028 268 NO NO NO NO
hgchr6_95248890-95248382 - Chr11_87512670-87512534 TRANS 0.028 208 NO NO NO NO
hgchr6_74859651-74859879 - Chr9_79263258-79263506 TRANS 0.028 343 NO NO NO NO
hgchr6_169943463-169942529.sub_1 - Chr17_13860904-13860120.sub_0 NOTRANS 0.028 438 YES NO NO YES
hgchr6_34678197-34678984 - Chr17_26351887-26352400 TRANS 0.028 411 YES NO NO NO
hgchr6_168715209-168713508.sub_0 - Chr17_13184827-13183952.sub_1 NOTRANS 0.029 476 NO NO NO NO
hgchr6_3672328-3672186 - Chr13_34061946-34061600 TRANS 0.029 478 NO NO NO NO
hgchr6_33780308-33780784 - Chr17_25716949-25717132 NOTRANS 0.029 302 YES NO NO YES
hgchr6_3562119-3561627 - Chr13_33935965-33935836 TRANS 0.029 414 NO NO NO NO
hgchr6_170750729-170749569.sub_1 - Chr17_14280489-14279934.sub_0 NOTRANS 0.03 387 NO NO NO YES
hgchr6_638032-637054.sub_0 - Chr13_30353677-30353304.sub_0 TRANS 0.03 752 NO NO NO NO
hgchr6_15611930-15612571 - Chr13_44370802-44371377 TRANS 0.03 349 YES NO NO NO

chr7


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 239 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr7_153083368-153084312.sub_1 - Chr5_25336265-25336840.sub_0 NOTRANS 0 459 NO NO NO NO
hgchr7_155044470-155046640.sub_1 - Chr5_26801266-26801581.sub_0 TRANS 0 590 NO NO NO NO
hgchr7_128872055-128871777 - Chr6_29946129-29945811 NOTRANS 0 490 NO NO NO NO
hgchr7_44522661-44521947.sub_0 - Chr11_6252306-6251464.sub_1 TRANS 0 583 YES YES YES YES
hgchr7_95289903-95289485 - Chr6_5671889-5671463 NOTRANS 0 418 NO NO NO NO
hgchr7_50195062-50197473.sub_2 - Chr11_11622832-11623913.sub_1 NOTRANS 0 668 NO NO NO NO
hgchr7_154848997-154849262 - Chr5_26650846-26651462 TRANS 0 658 NO NO NO NO
hgchr7_153274629-153275235 - Chr5_25515942-25516328 NOTRANS 0 395 NO NO NO NO
hgchr7_150918054-150917650 - Chr5_23432457-23431658 TRANS 0 615 YES NO NO YES
hgchr7_150709548-150708866 - Chr5_23280229-23279734 NOTRANS 0 448 YES NO NO NO
hgchr7_146399602-146399286 - Chr6_46113125-46112995 TRANS 0 748 NO NO NO NO
hgchr7_47096942-47097814 - Chr11_8332289-8332923 TRANS 0.001 527 YES NO NO NO
hgchr7_44386866-44387254 - Chr11_6162616-6163108 TRANS 0.001 591 YES YES NO YES
hgchr7_155055519-155054710.sub_0 - Chr5_26806134-26805590.sub_0 TRANS 0.001 471 NO NO NO YES
hgchr7_44774879-44775575 - Chr11_6401124-6401462 TRANS 0.001 607 NO NO NO NO
hgchr7_150897618-150897337 - Chr5_23422392-23422186 TRANS 0.001 433 NO NO NO NO
hgchr7_156280724-156280259 - Chr5_27858392-27857805 TRANS 0.001 437 NO NO NO NO
hgchr7_131299637-131298920.sub_0 - Chr6_32055662-32054772.sub_0 TRANS 0.001 642 YES NO NO NO
hgchr7_35365981-35366729 - Chr9_25010230-25010576 NOTRANS 0.001 326 YES NO NO NO
hgchr7_45268572-45269604 - Chr11_6847178-6847807 TRANS 0.001 487 NO NO NO NO
hgchr7_35898154-35898483 - Chr9_25368876-25369230 TRANS 0.001 464 NO NO NO NO
hgchr7_1453365-1454230 - Chr5_137297998-137298642 NOTRANS 0.002 628 NO NO NO NO
hgchr7_43584888-43584218 - Chr2_126830614-126830122 TRANS 0.002 420 NO NO NO NO
hgchr7_155123991-155125031 - Chr5_26880690-26880994 TRANS 0.002 428 NO NO NO NO
hgchr7_44261188-44260835 - Chr11_6057931-6057714 TRANS 0.002 508 NO NO NO NO
hgchr7_75253570-75254224 - Chr5_133174658-133175257 TRANS 0.002 555 NO NO NO NO
hgchr7_155544443-155543907 - Chr5_27264689-27264314 NOTRANS 0.002 362 NO NO NO NO
hgchr7_1530843-1530179 - Chr5_137360963-137360539 NOTRANS 0.003 487 NO NO NO NO
hgchr7_150993003-150994550.sub_1 - Chr5_23497718-23497924.sub_0 TRANS 0.003 473 NO NO NO NO
hgchr7_1530179-1530843 - Chr5_137360539-137360963 NOTRANS 0.003 550 NO NO NO YES
hgchr7_1517883-1517384.sub_0 - Chr5_137353739-137352840.sub_0 TRANS 0.003 663 NO NO NO NO
hgchr7_150917650-150918054 - Chr5_23431658-23432457 TRANS 0.003 423 YES NO NO NO
hgchr7_154849262-154848997 - Chr5_26651462-26650846 TRANS 0.003 494 NO NO NO NO
hgchr7_674513-675746 - Chr5_136648570-136648902 NOTRANS 0.003 437 NO NO NO NO
hgchr7_34733412-34733655 - Chr9_24344372-24344928 TRANS 0.003 452 NO NO NO NO
hgchr7_152435438-152434781 - Chr5_24730965-24730840 NOTRANS 0.003 312 NO NO NO NO
hgchr7_98213000-98213992 - Chr5_142298966-142299303 TRANS 0.003 404 NO NO NO NO
hgchr7_97562348-97561924 - Chr5_141723068-141722774 TRANS 0.003 469 YES NO NO NO
hgchr7_51468822-51467656.sub_0 - Chr11_12682166-12681547.sub_0 NOTRANS 0.004 381 NO NO NO YES
hgchr7_139849415-139849629 - Chr6_39520193-39520446 TRANS 0.004 319 YES YES NO NO
hgchr7_4641760-4642440 - Chr5_139925902-139926460 TRANS 0.004 600 NO NO NO YES
hgchr7_50660452-50660203 - Chr11_11954724-11954568 NOTRANS 0.004 307 NO NO NO NO
hgchr7_151229539-151229263 - Chr5_23655450-23655285 NOTRANS 0.004 265 YES NO NO YES
hgchr7_155365989-155365301 - Chr5_27149496-27149273 TRANS 0.004 482 NO NO NO YES
hgchr7_122800883-122800440 - Chr6_24361806-24361685 NOTRANS 0.004 283 NO YES NO NO
hgchr7_154671085-154669789.sub_1 - Chr5_26521395-26520944.sub_0 TRANS 0.004 451 YES NO NO NO
hgchr7_74821784-74821981 - Chr5_132870053-132870558 NOTRANS 0.004 326 NO NO NO NO
hgchr7_5305392-5304356.sub_1 - Chr5_140359655-140359445.sub_0 TRANS 0.004 504 NO NO NO NO
hgchr7_148397659-148397356 - Chr6_47851831-47851551 TRANS 0.004 398 YES NO NO YES
hgchr7_2745721-2746180 - Chr5_138306449-138306691 TRANS 0.005 374 NO NO NO NO
hgchr7_1201516-1201731 - Chr5_137084868-137085045 NOTRANS 0.005 282 NO NO NO NO
hgchr7_4588652-4589305 - Chr5_139887964-139888247 TRANS 0.005 451 YES NO NO NO
hgchr7_4583009-4582671 - Chr5_139884893-139884638 TRANS 0.005 328 YES YES YES YES
hgchr7_153265197-153265805 - Chr5_25506822-25507670 NOTRANS 0.006 401 NO NO NO NO
hgchr7_767729-768419 - Chr5_136732026-136732925 TRANS 0.006 513 YES NO NO NO
hgchr7_149960347-149959373.sub_1 - Chr6_48781904-48781280.sub_0 TRANS 0.006 638 YES YES YES NO
hgchr7_75140811-75140112 - Chr5_133061319-133060953 TRANS 0.006 463 NO NO NO YES
hgchr7_35898483-35898154 - Chr9_25369230-25368876 TRANS 0.006 320 NO NO NO NO
hgchr7_1066410-1066769 - Chr5_136970987-136971472 NOTRANS 0.006 261 NO NO NO YES
hgchr7_3581161-3581939.sub_0 - Chr5_139156502-139157330.sub_0 NOTRANS 0.006 385 NO NO NO NO
hgchr7_128833963-128834733 - Chr6_29914461-29915142 TRANS 0.006 376 NO NO NO NO
hgchr7_47622707-47623108 - Chr11_8744837-8745149 NOTRANS 0.006 281 NO NO NO NO
hgchr7_156212033-156211575 - Chr5_27794035-27793868 TRANS 0.006 476 NO NO NO NO
hgchr7_155966658-155966093 - Chr5_27620270-27619907 NOTRANS 0.006 421 YES YES YES NO
hgchr7_92421162-92420546.sub_0 - Chr6_3078246-3077420.sub_0 TRANS 0.007 408 YES YES NO NO
hgchr7_34545373-34545085 - Chr9_24145855-24145685 NOTRANS 0.007 336 NO NO NO NO
hgchr7_1720182-1718952.sub_0 - Chr5_137481522-137481180.sub_0 NOTRANS 0.007 547 NO NO NO NO
hgchr7_94818951-94819403 - Chr6_5161316-5162110 NOTRANS 0.007 393 YES NO NO NO
hgchr7_8061885-8062268 - Chr6_8492401-8492685 TRANS 0.007 364 NO NO NO NO
hgchr7_31066054-31066361 - Chr6_55561410-55561634 NOTRANS 0.007 279 NO NO NO NO
hgchr7_129679220-129678918 - Chr6_30583666-30583442 NOTRANS 0.007 458 NO NO NO NO
hgchr7_50197473-50195062.sub_0 - Chr11_11623913-11622832.sub_0 NOTRANS 0.007 536 NO NO NO NO
hgchr7_125842763-125842233 - Chr6_27276989-27276737 NOTRANS 0.007 351 NO NO NO NO
hgchr7_28967406-28967047 - Chr6_53957763-53957384 TRANS 0.008 359 NO NO NO NO
hgchr7_129531197-129531046 - Chr6_30456633-30456257 TRANS 0.008 258 YES YES NO NO
hgchr7_44098617-44097724.sub_0 - Chr11_5924526-5924259.sub_0 TRANS 0.008 380 NO NO NO NO
hgchr7_1255022-1254618 - Chr5_137121739-137121402 TRANS 0.008 408 NO YES YES YES
hgchr7_55807470-55806878 - Chr5_127293677-127293534 TRANS 0.008 341 YES YES NO NO
hgchr7_891977-892684 - Chr5_136815993-136817029 TRANS 0.008 586 NO NO NO NO
hgchr7_153920540-153919736.sub_0 - Chr5_25963918-25963467.sub_0 NOTRANS 0.009 454 NO NO NO NO
hgchr7_1897387-1896687 - Chr5_137617110-137616735 NOTRANS 0.009 379 NO NO NO NO
hgchr7_138867908-138866910.sub_0 - Chr6_38745748-38745370.sub_0 NOTRANS 0.009 589 NO NO NO YES
hgchr7_52394376-52395619 - Chr11_13888035-13888472 NOTRANS 0.009 290 NO NO NO NO
hgchr7_34180489-34180040 - Chr9_23729050-23728950 NOTRANS 0.009 194 NO NO NO NO
hgchr7_47466244-47466831 - Chr11_8601273-8601670 NOTRANS 0.009 445 NO NO NO YES
hgchr7_47054294-47053928.sub_0 - Chr11_8288717-8287680.sub_0 NOTRANS 0.009 367 NO NO NO NO
hgchr7_155694372-155693735 - Chr5_27370937-27370618 TRANS 0.009 503 NO NO NO NO
hgchr7_75321523-75321370 - Chr5_133223114-133222824 NOTRANS 0.009 233 YES YES NO NO
hgchr7_1061214-1061682 - Chr5_136965941-136966624 NOTRANS 0.009 589 NO NO NO NO
hgchr7_5421391-5420787 - Chr5_140456225-140455445 TRANS 0.009 466 NO NO NO NO
hgchr7_117484824-117484070.sub_0 - Chr6_18703823-18702675.sub_0 NOTRANS 0.009 359 NO NO NO NO
hgchr7_154663889-154665582.sub_1 - Chr5_26514268-26514495.sub_0 TRANS 0.009 558 NO NO NO NO
hgchr7_91366161-91366353 - Chr5_4065416-4065911 TRANS 0.01 395 NO YES YES NO
hgchr7_1943226-1943012 - Chr5_137649499-137648774 TRANS 0.01 465 NO NO NO YES
hgchr7_100870379-100870627 - Chr5_134127342-134127733 NOTRANS 0.01 378 NO NO NO YES
hgchr7_155073844-155074516 - Chr5_26817670-26818802 TRANS 0.01 515 NO NO NO NO
hgchr7_40024343-40024687 - Chr13_16985700-16986802 TRANS 0.01 346 NO NO NO NO
hgchr7_1229893-1230287 - Chr5_137099472-137099775 TRANS 0.01 326 NO NO NO YES
hgchr7_46674522-46674185 - Chr11_7934698-7934420 TRANS 0.01 293 NO NO NO NO
hgchr7_47537033-47537389 - Chr11_8677302-8677476 NOTRANS 0.01 411 NO NO NO NO
hgchr7_43613448-43613797 - Chr2_126841206-126841510 NOTRANS 0.011 269 NO NO NO NO
hgchr7_1890292-1892026.sub_2 - Chr5_137610802-137612218.sub_1 NOTRANS 0.011 567 NO NO NO NO
hgchr7_118019433-118019030 - Chr6_19405065-19404625 NOTRANS 0.011 285 NO NO NO NO
hgchr7_44698545-44698757 - Chr11_6371044-6371194 TRANS 0.011 309 NO YES NO YES
hgchr7_132943033-132942637.sub_0 - Chr6_33628181-33627177.sub_1 NOTRANS 0.011 306 NO NO NO NO
hgchr7_130770902-130770686 - Chr6_31500654-31500492 TRANS 0.011 390 NO NO NO NO
hgchr7_154696539-154695055.sub_0 - Chr5_26538223-26537689.sub_0 TRANS 0.011 523 NO NO NO NO
hgchr7_76277227-76276845 - Chr5_133475558-133475112 NOTRANS 0.011 454 NO NO NO NO
hgchr7_156497496-156498425 - Chr5_28016099-28016560 TRANS 0.011 348 NO NO NO NO
hgchr7_98118044-98117631 - Chr5_142230665-142230325 NOTRANS 0.012 301 NO NO NO YES
hgchr7_47206759-47206102 - Chr11_8410128-8409446 TRANS 0.012 320 YES NO NO NO
hgchr7_4582671-4583009 - Chr5_139884638-139884893 TRANS 0.012 316 YES YES YES YES
hgchr7_148430423-148431614 - Chr6_47872943-47873133 TRANS 0.012 393 YES YES YES NO
hgchr7_44034092-44034900 - Chr11_5868091-5868462 TRANS 0.012 440 YES NO NO NO
hgchr7_36006267-36006872 - Chr9_25461687-25462100 TRANS 0.013 480 NO NO NO NO
hgchr7_150412259-150412669 - Chr5_23025071-23025395 TRANS 0.013 422 NO NO NO NO
hgchr7_31236314-31235594.sub_0 - Chr6_55724157-55722822.sub_0 NOTRANS 0.013 399 NO NO NO NO
hgchr7_142971711-142972298 - Chr6_42580878-42581168 TRANS 0.013 635 NO NO NO NO
hgchr7_1767942-1767258 - Chr5_137511879-137511628 TRANS 0.013 440 NO NO NO NO
hgchr7_1718952-1720182 - Chr5_137481180-137481522 NOTRANS 0.013 411 NO NO NO NO
hgchr7_74817330-74817030 - Chr5_132862717-132862287 NOTRANS 0.013 371 NO NO NO NO
hgchr7_33227740-33228465 - Chr9_22644517-22645072 NOTRANS 0.013 310 NO NO NO NO
hgchr7_100870627-100870379 - Chr5_134127733-134127342 NOTRANS 0.014 421 NO NO NO YES
hgchr7_43936570-43937319 - Chr11_5773155-5773591 TRANS 0.014 469 NO NO NO YES
hgchr7_155125031-155123991.sub_0 - Chr5_26880994-26880690.sub_0 TRANS 0.014 321 NO NO NO YES
hgchr7_75254224-75253570 - Chr5_133175257-133174658 TRANS 0.014 592 NO YES NO NO
hgchr7_155273309-155273181 - Chr5_27065559-27064796 NOTRANS 0.014 367 NO NO NO NO
hgchr7_147476801-147477082 - Chr6_47230996-47231126 NOTRANS 0.014 260 NO NO NO NO
hgchr7_98337330-98336937 - Chr5_142391014-142390724 TRANS 0.014 297 NO NO NO NO
hgchr7_49397374-49396157.sub_0 - Chr11_10758912-10758502.sub_0 NOTRANS 0.015 364 NO NO NO YES
hgchr7_51103869-51105456.sub_1 - Chr11_12314515-12315944.sub_0 TRANS 0.015 505 NO NO NO NO
hgchr7_51111316-51111639 - Chr11_12319048-12319442 TRANS 0.016 349 NO NO NO NO
hgchr7_894684-896003 - Chr5_136825058-136825691 NOTRANS 0.016 497 NO NO NO NO
hgchr7_150744827-150744546 - Chr5_23297145-23296660 TRANS 0.016 373 NO NO NO NO
hgchr7_156565151-156564584 - Chr5_28085018-28084865 TRANS 0.016 384 NO NO NO YES
hgchr7_47285432-47286555 - Chr11_8466260-8466982 TRANS 0.016 412 NO NO NO NO
hgchr7_91302340-91302702 - Chr5_3985529-3985931 TRANS 0.016 220 NO NO NO NO
hgchr7_150844531-150843484.sub_1 - Chr5_23380521-23379946.sub_0 TRANS 0.017 355 NO NO NO YES
hgchr7_50343697-50343011 - Chr11_11739057-11738702 TRANS 0.017 324 NO NO NO YES
hgchr7_45685795-45684876.sub_0 - Chr11_7083271-7082963.sub_0 TRANS 0.017 452 NO NO NO YES
hgchr7_135410773-135411955 - Chr6_35743049-35743637 NOTRANS 0.017 420 NO NO NO NO
hgchr7_98257250-98256697 - Chr5_142329505-142329298 TRANS 0.017 391 YES NO NO NO
hgchr7_2168326-2169205 - Chr5_137829907-137830396 TRANS 0.017 392 NO NO NO NO
hgchr7_29414050-29412872.sub_0 - Chr6_54306675-54306387.sub_0 NOTRANS 0.017 360 NO NO NO NO
hgchr7_1358469-1359075 - Chr5_137213115-137213583 TRANS 0.017 600 YES YES YES YES
hgchr7_26392317-26392983 - Chr6_51729585-51729912 NOTRANS 0.018 383 NO NO NO NO
hgchr7_154526951-154526378 - Chr5_26470934-26470735 NOTRANS 0.018 512 YES NO YES NO
hgchr7_5225925-5226399 - Chr5_140291623-140292017 TRANS 0.018 305 NO NO NO NO
hgchr7_131298920-131299637 - Chr6_32054772-32055662 TRANS 0.018 550 YES NO NO NO
hgchr7_478265-477927 - Chr5_136503179-136502860 TRANS 0.018 387 NO NO NO NO
hgchr7_54203284-54202890 - Chr11_15980206-15979511 NOTRANS 0.019 269 NO NO NO NO
hgchr7_139165145-139165273 - Chr6_39007276-39007617 TRANS 0.019 238 NO NO NO NO
hgchr7_2006314-2006038 - Chr5_137690552-137689881 TRANS 0.019 449 NO NO NO YES
hgchr7_1448227-1447920 - Chr5_137291915-137291506 TRANS 0.019 345 NO NO NO NO
hgchr7_1107027-1107587 - Chr5_137004808-137005533 TRANS 0.019 518 NO NO NO YES
hgchr7_130028758-130028092 - Chr6_30945404-30944917 TRANS 0.02 374 YES NO NO NO
hgchr7_1696121-1696402 - Chr5_137464400-137464618 NOTRANS 0.02 247 NO NO NO YES
hgchr7_154189898-154189477 - Chr5_26143790-26143380 NOTRANS 0.02 289 NO NO NO NO
hgchr7_154789494-154789113.sub_0 - Chr5_26597470-26596374.sub_1 TRANS 0.02 457 NO NO NO YES
hgchr7_22313142-22313308 - Chr5_5756125-5756678 TRANS 0.02 263 NO NO NO NO
hgchr7_153366689-153366083.sub_0 - Chr5_25587629-25586769.sub_0 TRANS 0.021 316 NO NO NO YES
hgchr7_149006180-149004839.sub_0 - Chr6_48449486-48449172.sub_0 TRANS 0.021 389 YES YES YES NO
hgchr7_1159492-1160044 - Chr5_137053382-137053618 TRANS 0.021 402 NO NO NO NO
hgchr7_1672560-1671225.sub_0 - Chr5_137445523-137445263.sub_0 TRANS 0.021 426 NO NO NO NO
hgchr7_150129606-150129762 - Chr5_22764259-22764585 NOTRANS 0.021 287 NO YES YES NO
hgchr7_130884470-130884863 - Chr6_31584971-31585520 NOTRANS 0.021 284 NO NO NO YES
hgchr7_152022623-152022913 - Chr5_24283252-24283798 TRANS 0.022 347 NO NO NO NO
hgchr7_154765661-154765127 - Chr5_26580095-26579764 TRANS 0.022 375 NO NO NO NO
hgchr7_133565815-133566069 - Chr6_34178794-34179474 NOTRANS 0.022 390 NO NO NO YES
hgchr7_127484069-127484463 - Chr6_28918779-28919242 TRANS 0.022 387 NO NO NO NO
hgchr7_4038188-4038751 - Chr5_139600536-139600731 NOTRANS 0.022 328 YES NO NO NO
hgchr7_44136622-44136793 - Chr11_5958679-5958876 TRANS 0.022 366 NO NO NO NO
hgchr7_75167381-75167270 - Chr5_133097479-133097012 NOTRANS 0.022 393 NO NO NO NO
hgchr7_146783599-146783966 - Chr6_46480284-46480576 NOTRANS 0.022 227 NO NO NO NO
hgchr7_26900366-26901394 - Chr6_52097494-52098087 TRANS 0.022 443 NO NO NO NO
hgchr7_30061335-30061621 - Chr6_54739789-54740048 NOTRANS 0.022 217 NO NO NO NO
hgchr7_150912071-150911434 - Chr5_23427672-23426922 TRANS 0.022 524 NO NO NO NO
hgchr7_118388525-118387863 - Chr6_19844180-19843937 NOTRANS 0.023 220 NO NO NO NO
hgchr7_154740558-154741077 - Chr5_26556633-26557204 NOTRANS 0.023 390 NO YES NO YES
hgchr7_150929016-150929586 - Chr5_23451828-23452235 TRANS 0.023 373 NO NO NO YES
hgchr7_569236-569473 - Chr5_136568788-136569338 NOTRANS 0.023 384 NO NO NO NO
hgchr7_1107587-1107027 - Chr5_137005533-137004808 TRANS 0.023 485 NO NO NO YES
hgchr7_154935619-154936497 - Chr5_26714913-26715400 TRANS 0.023 410 YES NO NO NO
hgchr7_899084-898733 - Chr5_136828186-136827611 TRANS 0.023 424 NO NO NO YES
hgchr7_153230087-153230801 - Chr5_25476906-25477199 TRANS 0.024 353 NO NO NO NO
hgchr7_145517615-145517927 - Chr6_45280927-45281622 NOTRANS 0.024 221 NO NO NO NO
hgchr7_150245663-150245882 - Chr5_22867948-22868537 TRANS 0.024 375 NO NO NO YES
hgchr7_130105864-130105712 - Chr6_31005710-31005595 TRANS 0.024 332 NO NO NO NO
hgchr7_52262395-52263280.sub_0 - Chr11_13666883-13668188.sub_0 NOTRANS 0.024 378 NO NO NO NO
hgchr7_4495002-4494677 - Chr5_139823862-139823614 TRANS 0.024 310 NO NO NO YES
hgchr7_154775743-154776387 - Chr5_26584147-26585449 TRANS 0.024 414 NO NO NO NO
hgchr7_155086409-155086931 - Chr5_26838729-26839018 TRANS 0.024 332 NO NO NO YES
hgchr7_36006872-36006267 - Chr9_25462100-25461687 TRANS 0.024 426 NO NO NO NO
hgchr7_152474171-152474457 - Chr5_24776825-24776978 NOTRANS 0.024 172 NO NO NO NO
hgchr7_116503512-116503202 - Chr6_17720892-17720720 NOTRANS 0.024 167 NO NO NO NO
hgchr7_1695783-1695483 - Chr5_137464618-137464400 TRANS 0.025 284 NO NO NO NO
hgchr7_57058854-57058555 - Chr5_127566297-127565687 TRANS 0.025 329 NO YES NO NO
hgchr7_1254618-1255022 - Chr5_137121402-137121739 TRANS 0.025 394 NO YES NO YES
hgchr7_1662754-1662048 - Chr5_137437864-137437480 TRANS 0.025 350 NO NO NO NO
hgchr7_154776880-154777098.sub_0 - Chr5_26584147-26585449.sub_1 NOTRANS 0.025 429 NO NO NO NO
hgchr7_150957478-150957098 - Chr5_23476134-23475497 NOTRANS 0.025 418 NO NO NO NO
hgchr7_133874862-133875160 - Chr6_34453405-34453722 NOTRANS 0.026 252 NO NO NO NO
hgchr7_2042746-2041909.sub_0 - Chr5_137723918-137723478.sub_0 NOTRANS 0.026 521 YES NO NO NO
hgchr7_31585614-31586093 - Chr6_56052564-56052885 NOTRANS 0.026 283 NO NO NO NO
hgchr7_98287934-98287435 - Chr5_142354303-142353785 NOTRANS 0.026 363 YES NO NO YES
hgchr7_26262759-26262358.sub_0 - Chr6_51611903-51610825.sub_0 TRANS 0.026 401 NO NO NO YES
hgchr7_155333754-155336019.sub_1 - Chr5_27121398-27122663.sub_0 NOTRANS 0.026 492 NO NO NO NO
hgchr7_149959373-149960347 - Chr6_48781280-48781904 TRANS 0.026 424 YES YES YES NO
hgchr7_1698469-1699084 - Chr5_137466366-137466682 TRANS 0.027 466 NO NO NO NO
hgchr7_155839918-155840623 - Chr5_27525794-27526130 NOTRANS 0.027 395 NO NO NO NO
hgchr7_1098190-1096834.sub_0 - Chr5_136996874-136996415.sub_0 NOTRANS 0.027 506 NO NO NO NO
hgchr7_51105456-51103869.sub_0 - Chr11_12315944-12314515.sub_0 TRANS 0.027 463 NO NO NO NO
hgchr7_154663739-154663414.sub_0 - Chr5_26514114-26513007.sub_0 TRANS 0.027 430 NO NO NO YES
hgchr7_923570-923303 - Chr3_103657544-103657246 TRANS 0.027 381 NO NO NO NO
hgchr7_123193924-123194102 - Chr6_24724884-24725580 NOTRANS 0.028 214 YES NO NO NO
hgchr7_70694859-70694983 - Chr5_20807651-20807250 NOTRANS 0.028 265 YES NO NO NO
hgchr7_324070-324306 - Chr5_136188875-136188998 NOTRANS 0.028 241 NO NO NO NO
hgchr7_4022472-4022146 - Chr5_139586973-139586728 TRANS 0.028 428 NO NO NO NO
hgchr7_118019030-118019433 - Chr6_19404625-19405065 NOTRANS 0.028 300 NO NO NO NO
hgchr7_584315-584113 - Chr5_136581392-136581161 NOTRANS 0.028 301 NO NO NO NO
hgchr7_129571628-129571247 - Chr6_30489602-30489338 TRANS 0.028 379 NO NO NO NO
hgchr7_64891878-64891458 - Chr5_127566297-127565687 TRANS 0.028 429 YES YES NO NO
hgchr7_892684-891977.sub_0 - Chr5_136817029-136815993.sub_1 TRANS 0.028 456 NO NO NO YES
hgchr7_35030578-35030235 - Chr9_24691410-24690646 NOTRANS 0.028 218 NO NO NO NO
hgchr7_1821998-1821739.sub_0 - Chr5_137545231-137544280.sub_0 TRANS 0.029 402 NO NO NO YES
hgchr7_130130860-130130295 - Chr6_31021477-31021094 TRANS 0.029 251 NO NO NO YES
hgchr7_2988683-2988865 - Chr5_138523059-138523353 TRANS 0.029 452 NO NO NO NO
hgchr7_150412669-150412259 - Chr5_23025395-23025071 TRANS 0.029 387 NO NO NO NO
hgchr7_770023-771446 - Chr5_136737065-136737317 TRANS 0.029 435 NO NO NO NO
hgchr7_112101622-112101523.sub_0 - Chr6_13388028-13387106.sub_0 NOTRANS 0.029 253 NO NO YES NO
hgchr7_29227315-29227906 - Chr6_54184164-54184267 TRANS 0.03 235 YES NO NO NO
hgchr7_24886158-24886655 - Chr6_50479045-50479342 TRANS 0.03 286 NO NO NO YES
hgchr7_63740819-63741031 - Chr17_83544617-83544741 NOTRANS 0.03 208 NO NO NO NO
hgchr7_5045070-5045411 - Chr5_140092933-140093297 TRANS 0.03 490 YES YES YES YES
hgchr7_154438354-154438921 - Chr5_26403839-26404218 TRANS 0.03 418 NO NO NO YES
hgchr7_2548136-2547640 - Chr5_138178803-138178540 TRANS 0.03 517 NO NO NO YES
hgchr7_45524316-45524152.sub_0 - Chr11_7064079-7062784.sub_1 NOTRANS 0.03 312 NO NO NO YES
hgchr7_113526242-113526395 - Chr6_14844927-14845431 NOTRANS 0.03 246 NO NO NO NO
hgchr7_873899-873217 - Chr5_136802020-136801669 TRANS 0.03 396 NO YES YES YES

chr13


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 171 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr13_110364778-110363138.sub_0 - Chr8_11642615-11642014.sub_0 TRANS 0 655 YES YES YES NO
hgchr13_89012472-89012947 - Chr14_105632055-105632444 NOTRANS 0.001 390 NO NO NO NO
hgchr13_110863753-110866022 - Chr8_11923007-11923280 TRANS 0.001 605 NO NO NO NO
hgchr13_113191895-113193097.sub_1 - Chr8_13302921-13304801.sub_2 TRANS 0.001 820 YES YES NO NO
hgchr13_84614203-84613635 - Chr14_102408994-102408224 NOTRANS 0.001 376 NO NO NO NO
hgchr13_109131784-109130594.sub_0 - Chr8_10935943-10935273.sub_0 NOTRANS 0.002 499 YES NO NO YES
hgchr13_112290521-112290904 - Chr8_12688501-12689828 TRANS 0.002 489 YES YES NO NO
hgchr13_56615655-56614772.sub_0 - Chr6_89446592-89446321.sub_0 NOTRANS 0.002 422 YES YES YES NO
hgchr13_51339316-51338684.sub_0 - Chr8_20727810-20726991.sub_1 TRANS 0.002 434 NO NO NO YES
hgchr13_61174259-61172946.sub_0 - Chr14_80617465-80617133.sub_0 NOTRANS 0.002 433 NO NO NO NO
hgchr13_98002968-98003094 - Chr14_113698192-113698519 NOTRANS 0.002 385 NO NO NO NO
hgchr13_105514463-105513856 - Chr8_8195207-8194952 NOTRANS 0.002 420 NO NO NO YES
hgchr13_107604414-107604941 - Chr8_9935067-9935244 TRANS 0.003 354 NO NO NO NO
hgchr13_107604941-107604414 - Chr8_9935244-9935067 TRANS 0.003 404 NO NO NO NO
hgchr13_112686043-112685275.sub_0 - Chr8_12945501-12944590.sub_0 TRANS 0.003 496 NO NO NO NO
hgchr13_112391018-112392145 - Chr8_12772020-12773207 TRANS 0.003 624 YES NO NO NO
hgchr13_51228076-51228352 - Chr14_54941029-54941494 TRANS 0.003 419 NO NO NO NO
hgchr13_91701744-91701250 - Chr14_108231694-108231381 NOTRANS 0.003 324 NO NO NO NO
hgchr13_109659815-109660300 - Chr8_11248977-11249369 TRANS 0.003 436 NO NO NO NO
hgchr13_56642118-56641051.sub_1 - Chr6_89446592-89446321.sub_0 NOTRANS 0.004 422 YES YES YES NO
hgchr13_56622409-56621342.sub_1 - Chr6_89446592-89446321.sub_0 NOTRANS 0.004 422 YES YES YES NO
hgchr13_109580969-109580044.sub_0 - Chr8_11188116-11187488.sub_0 TRANS 0.004 520 NO NO NO YES
hgchr13_110363138-110364778 - Chr8_11642014-11642615 TRANS 0.004 454 YES YES YES NO
hgchr13_113845284-113845710 - Chr8_13640160-13640954 TRANS 0.004 441 NO NO NO NO
hgchr13_56635553-56634486.sub_1 - Chr6_89446592-89446321.sub_0 NOTRANS 0.004 422 YES YES YES NO
hgchr13_109720382-109719160.sub_0 - Chr8_11289381-11289043.sub_0 NOTRANS 0.004 430 YES NO NO YES
hgchr13_56628982-56627915.sub_1 - Chr6_89446592-89446321.sub_0 NOTRANS 0.004 422 YES YES YES NO
hgchr13_111846628-111846322.sub_0 - Chr8_12483809-12482671.sub_0 NOTRANS 0.005 529 NO YES NO YES
hgchr13_112923294-112923698 - Chr8_13134415-13135244 TRANS 0.005 465 NO YES NO NO
hgchr13_109856289-109855489.sub_0 - Chr8_11393690-11393307.sub_0 TRANS 0.005 436 NO YES NO NO
hgchr13_99015596-99016316 - Chr14_114496207-114496642 TRANS 0.005 415 NO NO NO NO
hgchr13_105428646-105429034 - Chr8_8103146-8103476 TRANS 0.005 295 NO NO NO NO
hgchr13_27401917-27400356.sub_1 - Chr5_144603104-144602348.sub_0 TRANS 0.005 573 NO YES NO YES
hgchr13_110703464-110703191 - Chr8_11809336-11809170 TRANS 0.005 438 NO YES NO NO
hgchr13_66974320-66973931 - Chr14_86384295-86384014 TRANS 0.005 268 NO NO NO NO
hgchr13_111602740-111601958.sub_0 - Chr8_12295700-12294482.sub_0 TRANS 0.006 491 YES NO NO YES
hgchr13_19254471-19253933 - Chr14_48756288-48755747 NOTRANS 0.006 527 NO YES YES NO
hgchr13_27935667-27936102 - Chr5_145022568-145023122 NOTRANS 0.007 405 NO NO NO NO
hgchr13_68691195-68690833 - Chr14_87858525-87858340 NOTRANS 0.007 266 NO NO NO NO
hgchr13_109701212-109702380 - Chr8_11279239-11279595 TRANS 0.007 456 NO NO NO NO
hgchr13_110113898-110114375 - Chr8_11532370-11532705 TRANS 0.007 482 YES NO NO YES
hgchr13_98224400-98224648 - Chr14_113870023-113871602 TRANS 0.007 443 NO NO NO NO
hgchr13_110009746-110009414 - Chr8_11482859-11482642 TRANS 0.007 313 YES NO NO YES
hgchr13_112594230-112595273 - Chr8_12888003-12888333 NOTRANS 0.008 520 NO NO NO NO
hgchr13_110251431-110251701 - Chr8_11592591-11592850 NOTRANS 0.008 337 NO NO NO YES
hgchr13_63482602-63481320.sub_1 - Chr14_82430125-82429779.sub_0 NOTRANS 0.008 259 NO NO NO YES
hgchr13_74214722-74214480 - Chr14_93161018-93160729 NOTRANS 0.008 221 NO NO NO YES
hgchr13_112613281-112614392 - Chr8_12904325-12904617 TRANS 0.008 631 NO NO NO NO
hgchr13_99886882-99887098 - Chr14_115125264-115125644 NOTRANS 0.008 333 NO NO NO NO
hgchr13_78832606-78833221 - Chr14_97393647-97393798 NOTRANS 0.009 391 NO YES NO NO
hgchr13_98836726-98837622 - Chr14_114356918-114357399 TRANS 0.009 433 NO NO NO NO
hgchr13_105379370-105378855 - Chr8_8038285-8037636 TRANS 0.009 419 NO NO NO NO
hgchr13_110481337-110482638 - Chr8_11698946-11699169 TRANS 0.009 400 NO NO NO NO
hgchr13_77438325-77438598 - Chr14_96142439-96142722 NOTRANS 0.01 250 NO NO NO NO
hgchr13_32703251-32703979 - Chr5_148613790-148614275 TRANS 0.01 428 YES NO NO NO
hgchr13_50535075-50536397 - Chr14_54441798-54442061 NOTRANS 0.01 420 NO NO NO NO
hgchr13_109680504-109680258.sub_0 - Chr8_11265410-11264411.sub_0 TRANS 0.01 364 YES NO NO YES
hgchr13_19136148-19135274.sub_0 - Chr14_48668805-48667687.sub_0 TRANS 0.01 428 NO YES NO NO
hgchr13_109139674-109138343.sub_1 - Chr8_10942173-10941599.sub_0 TRANS 0.01 346 NO NO NO NO
hgchr13_29244103-29243800 - Chr5_145836862-145836619 NOTRANS 0.01 196 NO NO NO YES
hgchr13_111072263-111072909 - Chr8_12083551-12083779 TRANS 0.011 423 NO NO NO YES
hgchr13_109195130-109195930 - Chr8_10982742-10983165 TRANS 0.011 489 NO NO NO NO
hgchr13_98277192-98277595 - Chr14_113916581-113916733 NOTRANS 0.011 289 NO NO NO NO
hgchr13_26083538-26083707 - Chr5_143744527-143744704 NOTRANS 0.011 290 NO NO NO NO
hgchr13_97867709-97866927.sub_0 - Chr14_113601581-113600374.sub_1 TRANS 0.011 380 YES NO NO NO
hgchr13_81630812-81632035 - Chr14_99748101-99748325 NOTRANS 0.011 281 NO NO NO NO
hgchr13_107132645-107133332 - Chr8_9618130-9618434 TRANS 0.011 259 YES NO YES NO
hgchr13_22435088-22434244.sub_0 - Chr12_107176105-107175671.sub_0 NOTRANS 0.012 540 NO NO NO NO
hgchr13_110866022-110863753.sub_1 - Chr8_11923280-11923007.sub_0 TRANS 0.012 443 NO NO NO NO
hgchr13_111640196-111639714 - Chr8_12318867-12318566 NOTRANS 0.012 327 NO NO NO NO
hgchr13_99361001-99361270 - Chr14_114754031-114754467 TRANS 0.013 386 NO NO NO NO
hgchr13_109928722-109929229 - Chr8_11437876-11438075 TRANS 0.013 392 NO NO NO YES
hgchr13_108402904-108403933 - Chr8_10432116-10432847 NOTRANS 0.013 317 NO NO NO NO
hgchr13_113332499-113333906 - Chr8_13385763-13386127 TRANS 0.014 385 NO NO NO NO
hgchr13_110657026-110655788.sub_0 - Chr8_11789161-11788869.sub_0 TRANS 0.014 404 YES NO NO NO
hgchr13_113768424-113769122.sub_0 - Chr8_13588074-13589086.sub_0 NOTRANS 0.014 756 NO NO NO NO
hgchr13_109915640-109914646.sub_0 - Chr8_11431495-11430855.sub_0 TRANS 0.014 495 NO NO NO NO
hgchr13_113848104-113847015.sub_0 - Chr8_13642418-13641303.sub_0 TRANS 0.014 518 NO NO NO NO
hgchr13_110810270-110810705 - ChrUnRandom_35808562-35808879 NOTRANS 0.014 287 NO NO NO NO
hgchr13_92840447-92840991 - Chr14_109379635-109379791 TRANS 0.015 183 YES NO NO NO
hgchr13_26333924-26335618 - Chr5_143968189-143968581 TRANS 0.015 342 NO NO NO NO
hgchr13_104579516-104578831 - Chr8_7161514-7161148 NOTRANS 0.015 328 NO NO NO YES
hgchr13_110138649-110138404 - Chr8_11549305-11548896 TRANS 0.015 316 NO NO NO NO
hgchr13_51250312-51250980 - Chr14_54957394-54957792 TRANS 0.015 367 YES NO NO NO
hgchr13_30681142-30681543 - Chr5_147151791-147152650 TRANS 0.016 507 NO NO NO NO
hgchr13_51240114-51240903 - Chr14_54951142-54951386 TRANS 0.016 363 YES NO NO YES
hgchr13_109650393-109649019.sub_0 - Chr8_11241054-11240356.sub_0 TRANS 0.016 423 NO NO NO YES
hgchr13_53687875-53689010 - Chr14_73077730-73078304 NOTRANS 0.016 330 NO NO NO NO
hgchr13_107990584-107991220 - Chr8_10188509-10188819 NOTRANS 0.016 333 NO NO NO YES
hgchr13_113371990-113371020.sub_1 - Chr8_13423149-13422969.sub_0 NOTRANS 0.017 380 NO NO NO YES
hgchr13_94221557-94221341 - Chr14_110604244-110604092 NOTRANS 0.017 220 NO NO NO YES
hgchr13_23730819-23731433 - Chr14_52715514-52715773 TRANS 0.017 402 NO NO NO YES
hgchr13_112848515-112849686 - Chr8_13068727-13069679 TRANS 0.017 468 NO NO NO NO
hgchr13_111049367-111048061.sub_0 - Chr8_12061550-12061165.sub_0 TRANS 0.017 483 NO NO NO NO
hgchr13_64005996-64005497 - Chr14_82996102-82995893 NOTRANS 0.017 197 NO NO NO NO
hgchr13_49827355-49826857.sub_0 - Chr14_53871481-53870665.sub_0 NOTRANS 0.018 343 NO NO NO NO
hgchr13_24099901-24099433 - Chr14_48293393-48293241 NOTRANS 0.018 259 NO NO NO NO
hgchr13_97926177-97926020 - Chr14_113641400-113641158 TRANS 0.018 240 NO NO NO YES
hgchr13_110094684-110094402 - Chr8_11522371-11522213 TRANS 0.018 317 YES NO NO NO
hgchr13_21681240-21681958 - Chr14_50618212-50618954 TRANS 0.018 333 NO YES NO NO
hgchr13_111048061-111049367 - Chr8_12061165-12061550 TRANS 0.019 483 NO YES NO NO
hgchr13_97888857-97889042 - Chr14_113613209-113613391 TRANS 0.019 324 NO NO NO NO
hgchr13_111916461-111915969.sub_0 - Chr8_12526548-12525653.sub_0 TRANS 0.019 457 NO NO NO YES
hgchr13_110869123-110868377 - Chr8_11928106-11927502 TRANS 0.019 462 NO NO NO YES
hgchr13_28188385-28189599 - Chr5_145217646-145218287 TRANS 0.019 454 NO NO NO NO
hgchr13_30845629-30845438 - Chr5_147292789-147292143 NOTRANS 0.019 194 NO NO NO YES
hgchr13_23745026-23745452 - Chr14_52729176-52729813 TRANS 0.02 498 YES NO NO YES
hgchr13_106017752-106017290.sub_0 - Chr8_8685547-8684700.sub_0 TRANS 0.02 326 NO NO NO NO
hgchr13_84276869-84277177 - Chr14_102080800-102081134 NOTRANS 0.02 259 NO NO NO NO
hgchr13_57844736-57843951 - Chr14_77046675-77046435 NOTRANS 0.02 270 NO NO NO YES
hgchr13_77438598-77438325 - Chr14_96142722-96142439 NOTRANS 0.02 285 NO NO NO NO
hgchr13_51118657-51118481 - Chr14_54870934-54870794 NOTRANS 0.021 292 NO YES NO NO
hgchr13_112126300-112126662 - Chr8_12612503-12613160 TRANS 0.021 288 NO NO NO NO
hgchr13_32394126-32394427 - Chr5_148367010-148367321 TRANS 0.021 260 NO NO NO NO
hgchr13_60457513-60458821 - Chr14_79915624-79916314 NOTRANS 0.021 222 NO NO NO NO
hgchr13_91941174-91941871 - Chr14_108473340-108473461 NOTRANS 0.021 222 NO NO NO NO
hgchr13_23745452-23745026 - Chr14_52729813-52729176 TRANS 0.022 424 YES NO NO YES
hgchr13_18141536-18139720.sub_0 - Chr17_54538435-54537381.sub_0 TRANS 0.022 490 NO NO YES NO
hgchr13_113135672-113134728.sub_0 - Chr8_13262595-13262357.sub_0 NOTRANS 0.023 446 NO NO NO NO
hgchr13_113355893-113356217 - Chr8_13406969-13407233 NOTRANS 0.023 400 NO NO NO NO
hgchr13_100157801-100157563 - Chr14_115333556-115332795 NOTRANS 0.023 396 NO NO NO NO
hgchr13_32330507-32330257 - Chr5_148318808-148318679 NOTRANS 0.023 243 NO NO NO NO
hgchr13_112602614-112603461 - Chr8_12894241-12894808 TRANS 0.023 487 NO NO NO NO
hgchr13_19887841-19887425 - Chr14_49276338-49276036 TRANS 0.023 558 YES NO NO YES
hgchr13_113333906-113332499.sub_0 - Chr8_13386127-13385763.sub_0 NOTRANS 0.023 330 NO NO NO NO
hgchr13_89825211-89824385.sub_0 - Chr14_106366966-106366868.sub_0 NOTRANS 0.024 183 NO NO NO YES
hgchr13_104681820-104680990.sub_0 - Chr8_7264460-7264182.sub_0 NOTRANS 0.024 275 NO NO NO NO
hgchr13_109178197-109179436 - Chr8_10975934-10976790 NOTRANS 0.024 412 YES NO NO NO
hgchr13_30673004-30672754 - Chr5_147142085-147141391 TRANS 0.024 432 NO NO NO YES
hgchr13_97426213-97426462 - Chr14_113248813-113248918 TRANS 0.024 305 NO NO NO NO
hgchr13_99180694-99180341 - Chr14_114620268-114619889 NOTRANS 0.025 284 NO NO NO NO
hgchr13_80490332-80489969 - Chr14_98774994-98774700 NOTRANS 0.025 228 NO NO NO NO
hgchr13_112762641-112762871 - Chr8_13009990-13010130 TRANS 0.025 353 NO NO NO YES
hgchr13_109681861-109680697.sub_0 - Chr8_11265410-11264411.sub_0 TRANS 0.025 509 NO NO NO YES
hgchr13_27267781-27267134 - Chr5_144516355-144515782 NOTRANS 0.025 402 NO NO NO NO
hgchr13_112059290-112060286.sub_0 - Chr8_12580112-12580436.sub_0 NOTRANS 0.025 310 NO NO NO NO
hgchr13_32841120-32840901 - Chr5_148717302-148717093 TRANS 0.025 347 NO NO NO NO
hgchr13_112595273-112594230.sub_0 - Chr8_12888333-12888003.sub_0 TRANS 0.025 468 NO NO NO NO
hgchr13_64677323-64677809 - Chr14_83674272-83675196 TRANS 0.025 350 NO NO NO NO
hgchr13_60623877-60624333 - Chr14_80102265-80102410 NOTRANS 0.026 145 NO NO NO NO
hgchr13_18531401-18531149 - Chr13_48329427-48328920 NOTRANS 0.026 428 NO YES NO NO
hgchr13_49148769-49149374 - Chr14_53344074-53344308 NOTRANS 0.026 262 NO NO NO YES
hgchr13_107577953-107578153 - Chr8_9922627-9923180 NOTRANS 0.026 219 NO NO NO YES
hgchr13_111946892-111946518 - Chr8_12540712-12540504 TRANS 0.026 241 NO NO NO NO
hgchr13_58398910-58398713 - Chr14_77685977-77685840 NOTRANS 0.027 392 NO NO NO YES
hgchr13_110251701-110251431 - Chr8_11592850-11592591 NOTRANS 0.027 373 NO NO NO YES
hgchr13_92818991-92818823 - Chr7_100271154-100270524 TRANS 0.027 276 NO NO NO NO
hgchr13_110635018-110635640 - Chr8_11782725-11783212 TRANS 0.027 411 YES NO NO YES
hgchr13_26822703-26822202 - Chr5_144223612-144222999 TRANS 0.027 398 NO NO NO YES
hgchr13_112999871-113000893 - Chr8_13176457-13176592 NOTRANS 0.027 412 YES YES NO NO
hgchr13_112573772-112574019 - Chr8_12873054-12873236 TRANS 0.028 276 NO NO NO NO
hgchr13_110480929-110479607.sub_0 - Chr8_11698315-11698050.sub_0 TRANS 0.028 433 NO NO NO NO
hgchr13_31787628-31788273 - Chr5_147987764-147988042 TRANS 0.028 554 YES YES YES NO
hgchr13_110012203-110012726 - Chr8_11485066-11485961 TRANS 0.028 375 YES NO YES NO
hgchr13_57956319-57956139 - Chr14_77189397-77189281 NOTRANS 0.028 301 NO NO NO NO
hgchr13_110114375-110113898 - Chr8_11532705-11532370 TRANS 0.029 506 YES NO NO YES
hgchr13_50588205-50588631 - Chr14_54478735-54479102 TRANS 0.029 345 NO NO NO YES
hgchr13_57819538-57819384 - Chr14_77019539-77019280 NOTRANS 0.029 226 NO NO NO NO
hgchr13_52264411-52264746 - Chr14_71492790-71493008 TRANS 0.029 395 NO NO NO NO
hgchr13_51250980-51250312 - Chr14_54957792-54957394 TRANS 0.029 323 YES NO NO NO
hgchr13_108743179-108743599 - Chr8_10677602-10678075 TRANS 0.029 343 NO NO NO YES
hgchr13_29616005-29615145.sub_0 - Chr5_146150164-146148728.sub_1 TRANS 0.029 415 NO NO NO YES
hgchr13_112538480-112536978.sub_0 - Chr8_12851479-12851042.sub_0 TRANS 0.029 500 YES NO NO NO
hgchr13_110012726-110012203.sub_0 - Chr8_11485961-11485066.sub_0 TRANS 0.029 431 NO NO YES NO
hgchr13_18424262-18424511 - Chr13_48310117-48310316 NOTRANS 0.029 367 NO NO NO NO
hgchr13_31077733-31077498.sub_0 - Chr5_147425068-147423657.sub_0 NOTRANS 0.03 396 NO NO NO NO
hgchr13_112923698-112923294.sub_0 - Chr8_13135244-13134415.sub_0 TRANS 0.03 368 YES YES NO YES
hgchr13_97426462-97426213 - Chr14_113248918-113248813 TRANS 0.03 219 NO NO NO NO
hgchr13_19773437-19774338 - Chr14_49181656-49182258 NOTRANS 0.03 434 NO NO NO NO
hgchr13_21041041-21040042.sub_0 - Chr14_49964369-49964162.sub_0 NOTRANS 0.03 302 NO NO NO NO
hgchr13_89713853-89714333 - Chr14_106265979-106266111 NOTRANS 0.03 200 NO NO NO NO

chr14


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 161 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr14_104865152-104862539.sub_1 - Chr12_107779840-107778922.sub_0 NOTRANS 0 873 NO NO NO NO
hgchr14_104731142-104731964 - Chr12_107701959-107703412 NOTRANS 0 740 NO YES YES NO
hgchr14_30098624-30097169.sub_0 - Chr12_46567149-46566318.sub_0 TRANS 0 815 YES YES NO NO
hgchr14_67214332-67214443 - Chr12_74470584-74471025 TRANS 0 383 YES YES YES NO
hgchr14_30097169-30098624 - Chr12_46566318-46567149 TRANS 0 836 YES YES NO NO
hgchr14_97373560-97374572 - Chr12_101557326-101558039 NOTRANS 0 573 NO NO NO NO
hgchr14_101091108-101091422 - Chr12_105020047-105020533 NOTRANS 0.001 393 NO NO NO YES
hgchr14_100778156-100777924 - Chr12_104716104-104715833 TRANS 0.001 347 NO NO NO YES
hgchr14_99143110-99142780 - Chr12_103026975-103026518 TRANS 0.001 639 NO NO NO YES
hgchr14_91934553-91935989 - Chr12_96871674-96871914 NOTRANS 0.001 450 NO NO NO NO
hgchr14_100195292-100194421.sub_0 - Chr12_104146766-104146210.sub_0 TRANS 0.001 575 NO NO NO NO
hgchr14_23859458-23858953 - Chr14_47744830-47744672 NOTRANS 0.001 296 NO NO NO NO
hgchr14_104292414-104293000 - Chr12_107397770-107398779 TRANS 0.001 575 NO NO NO NO
hgchr14_97908512-97908698 - Chr12_102026148-102026694 NOTRANS 0.001 347 NO NO NO NO
hgchr14_28686484-28687018 - Chr12_45090747-45091055 NOTRANS 0.001 377 NO NO NO NO
hgchr14_99142780-99143110 - Chr12_103026518-103026975 TRANS 0.001 434 NO NO NO YES
hgchr14_94053857-94054321 - Chr12_98768370-98769399 NOTRANS 0.001 684 NO NO NO NO
hgchr14_71093651-71095079 - Chr12_77623694-77624007 NOTRANS 0.002 484 NO NO NO NO
hgchr14_97374572-97373560.sub_0 - Chr12_101558039-101557326.sub_0 NOTRANS 0.002 546 NO NO NO NO
hgchr14_100587072-100588274 - Chr12_104479283-104479730 TRANS 0.003 477 NO NO NO NO
hgchr14_104839237-104838626 - Chr12_107755235-107754599 TRANS 0.003 449 NO YES YES YES
hgchr14_97520723-97521795.sub_0 - Chr12_101703388-101703904.sub_0 NOTRANS 0.003 435 NO NO NO NO
hgchr14_58849667-58849518 - Chr12_67201537-67200907 TRANS 0.003 278 YES NO NO NO
hgchr14_89258282-89258019 - Chr12_94256915-94256568 NOTRANS 0.003 428 NO YES YES YES
hgchr14_104778329-104778638 - Chr12_107726632-107727126 TRANS 0.004 416 NO NO NO NO
hgchr14_102473748-102474178 - Chr12_106039095-106039448 TRANS 0.004 573 NO YES NO NO
hgchr14_104558285-104557393.sub_0 - Chr12_107579920-107578977.sub_0 TRANS 0.004 724 NO YES YES NO
hgchr14_105236109-105236469.sub_0 - Chr12_107998842-108000777.sub_1 NOTRANS 0.004 614 NO NO NO NO
hgchr14_97908698-97908512 - Chr12_102026694-102026148 NOTRANS 0.004 274 NO NO NO NO
hgchr14_101632460-101631863 - Chr12_105449193-105448645 NOTRANS 0.005 460 NO NO NO YES
hgchr14_99426899-99426463 - Chr12_103250999-103250398 TRANS 0.005 526 NO NO NO YES
hgchr14_18860064-18859691 - Chr4_152752777-152752574 NOTRANS 0.005 476 NO NO YES NO
hgchr14_94221686-94221429 - Chr12_99151667-99151366 NOTRANS 0.005 353 NO NO NO NO
hgchr14_98566573-98566157.sub_0 - Chr12_102551266-102550109.sub_0 TRANS 0.006 486 NO NO NO NO
hgchr14_104557393-104558285 - Chr12_107578977-107579920 TRANS 0.006 591 YES NO NO NO
hgchr14_102854670-102854241.sub_0 - Chr12_106265323-106264336.sub_0 TRANS 0.006 406 YES NO NO NO
hgchr14_75943365-75943939 - Chr12_81773945-81774088 TRANS 0.006 424 NO NO NO NO
hgchr14_76541015-76541672 - Chr12_82192449-82192817 TRANS 0.006 373 NO NO NO YES
hgchr14_52908581-52908757 - Chr14_38490049-38490217 TRANS 0.006 391 NO NO NO NO
hgchr14_23154062-23153661 - Chr14_47113712-47113074 TRANS 0.007 466 NO NO NO NO
hgchr14_104546644-104547315 - Chr12_107570890-107571226 NOTRANS 0.007 368 YES NO NO YES
hgchr14_96117792-96117292 - Chr12_100571750-100571261 NOTRANS 0.007 336 NO NO NO NO
hgchr14_95647800-95647418 - Chr12_100219026-100218631 TRANS 0.007 373 NO NO NO NO
hgchr14_90105809-90105016 - Chr12_94962894-94962425 NOTRANS 0.008 413 NO NO NO NO
hgchr14_104048955-104048595 - Chr12_107186891-107186653 TRANS 0.008 526 NO NO NO YES
hgchr14_100783351-100785542 - Chr12_104720025-104720312 NOTRANS 0.008 552 NO NO NO NO
hgchr14_50626321-50625797 - Chr12_65606511-65606089 NOTRANS 0.008 376 NO YES NO NO
hgchr14_93415937-93414258.sub_1 - Chr12_97976618-97976387.sub_0 TRANS 0.009 438 NO NO NO NO
hgchr14_104555992-104555528 - Chr12_107578305-107578126 NOTRANS 0.009 319 NO YES YES NO
hgchr14_76460132-76460735 - Chr12_82134361-82134835 TRANS 0.009 471 NO NO NO NO
hgchr14_105269566-105269112 - Chr9_111724419-111724277 NOTRANS 0.009 261 YES NO NO NO
hgchr14_93996458-93996654 - Chr12_98704130-98704336 NOTRANS 0.01 239 NO YES NO NO
hgchr14_98566157-98566573 - Chr12_102550109-102551266 TRANS 0.01 426 NO NO NO NO
hgchr14_34441623-34441850 - Chr12_50186233-50186408 NOTRANS 0.01 244 NO NO NO NO
hgchr14_95080756-95080979 - Chr12_99753728-99753880 NOTRANS 0.01 293 NO YES YES NO
hgchr14_100769385-100769613 - Chr12_104706122-104706552 NOTRANS 0.01 516 NO NO NO NO
hgchr14_104995631-104995354.sub_0 - Chr12_107880417-107879372.sub_0 NOTRANS 0.011 544 NO NO NO NO
hgchr14_101757157-101757550 - Chr12_105548407-105548784 TRANS 0.011 498 NO NO NO NO
hgchr14_101484430-101485115 - Chr12_105338167-105338671 TRANS 0.011 476 YES YES YES YES
hgchr14_83578469-83578304 - Chr12_88835426-88835300 TRANS 0.011 209 NO NO NO NO
hgchr14_102674692-102673814.sub_0 - Chr12_106200452-106200164.sub_0 TRANS 0.011 487 NO NO NO NO
hgchr14_76746508-76746929 - Chr12_82382480-82382752 TRANS 0.011 328 NO NO NO NO
hgchr14_104009856-104010799.sub_1 - Chr12_107151869-107152591.sub_0 NOTRANS 0.011 523 NO NO NO NO
hgchr14_24482396-24480648.sub_2 - Chr12_40106760-40106487.sub_0 TRANS 0.012 417 NO NO NO NO
hgchr14_102485849-102484835.sub_1 - Chr12_106049536-106049137.sub_0 NOTRANS 0.013 519 NO YES NO NO
hgchr14_94693905-94694409 - Chr12_99464837-99465322 TRANS 0.013 292 YES YES YES NO
hgchr14_73316734-73317396 - Chr12_79528814-79529089 TRANS 0.013 403 NO NO NO NO
hgchr14_100662268-100661793 - Chr12_104587340-104586924 TRANS 0.013 481 NO NO NO YES
hgchr14_38042355-38042585 - Chr12_53711036-53711274 NOTRANS 0.014 326 NO NO NO NO
hgchr14_69895720-69895931 - Chr12_76787091-76787365 TRANS 0.014 199 YES YES YES NO
hgchr14_104862539-104865152.sub_2 - Chr12_107778922-107779840.sub_0 NOTRANS 0.014 984 NO NO NO NO
hgchr14_65747896-65747707 - Chr12_73210692-73209934 NOTRANS 0.014 286 NO NO NO NO
hgchr14_94732551-94731894 - Chr12_99489434-99488709 TRANS 0.015 428 NO NO NO NO
hgchr14_89814366-89813154.sub_0 - Chr12_94768423-94767309.sub_0 NOTRANS 0.015 490 YES NO NO NO
hgchr14_96492756-96493077 - Chr12_100848080-100848371 TRANS 0.015 478 NO NO NO YES
hgchr14_30996226-30995413.sub_0 - Chr12_47225605-47225359.sub_0 TRANS 0.015 368 YES YES YES NO
hgchr14_99426463-99426899 - Chr12_103250398-103250999 TRANS 0.015 423 NO NO NO YES
hgchr14_101631863-101632460 - Chr12_105448645-105449193 NOTRANS 0.015 436 NO NO NO YES
hgchr14_105071609-105071076 - Chr12_107947034-107946584 NOTRANS 0.015 352 YES NO NO YES
hgchr14_101761903-101763660 - Chr12_105552276-105552866 TRANS 0.016 608 NO YES NO NO
hgchr14_24573579-24572878 - Chr12_40222009-40221693 TRANS 0.016 320 NO NO NO NO
hgchr14_102624510-102624800 - Chr12_106155096-106155297 NOTRANS 0.016 386 YES YES NO NO
hgchr14_104470370-104470991 - Chr12_107521036-107521458 TRANS 0.016 435 NO YES YES YES
hgchr14_92547483-92547737 - Chr12_97296728-97296935 NOTRANS 0.017 416 NO YES NO YES
hgchr14_76062206-76061980 - Chr12_81866837-81866639 NOTRANS 0.017 347 NO NO NO NO
hgchr14_100687105-100687425 - Chr12_104618977-104619223 TRANS 0.017 358 NO NO NO YES
hgchr14_36543615-36543730 - Chr12_52243177-52243302 TRANS 0.017 432 NO NO NO NO
hgchr14_104903812-104904556 - Chr12_107802989-107803437 NOTRANS 0.017 520 NO YES NO YES
hgchr14_104849786-104848937.sub_0 - Chr12_107766104-107765307.sub_0 TRANS 0.017 542 NO NO NO NO
hgchr14_75983338-75983027 - Chr12_81801142-81800780 TRANS 0.017 314 NO NO NO YES
hgchr14_103166011-103165888 - Chr12_106511878-106511293 TRANS 0.018 499 NO NO NO NO
hgchr14_51312955-51313213 - Chr12_66177431-66177646 TRANS 0.018 248 NO NO NO NO
hgchr14_103981346-103980510.sub_0 - Chr12_107131274-107130995.sub_0 TRANS 0.018 517 NO NO NO NO
hgchr14_104280743-104281378 - Chr12_107388700-107389664 TRANS 0.018 461 YES YES NO NO
hgchr14_18857947-18859167.sub_1 - Chr4_152751979-152752192.sub_0 NOTRANS 0.018 349 NO NO YES NO
hgchr14_103087135-103087771 - Chr12_106451138-106451588 TRANS 0.018 397 NO YES NO YES
hgchr14_90194866-90195309 - Chr12_95033875-95034395 NOTRANS 0.018 380 NO NO NO NO
hgchr14_102545019-102544702.sub_0 - Chr12_106087609-106086736.sub_0 NOTRANS 0.018 412 NO NO NO NO
hgchr14_104838626-104839237 - Chr12_107754599-107755235 TRANS 0.019 582 NO YES YES YES
hgchr14_100785659-100785935 - Chr12_104720660-104720773 TRANS 0.019 173 NO NO NO NO
hgchr14_66948449-66948112 - Chr12_74204296-74204151 NOTRANS 0.019 319 NO NO NO YES
hgchr14_104745633-104744982 - Chr12_107712136-107711794 TRANS 0.019 572 NO YES NO NO
hgchr14_103969191-103968959.sub_0 - Chr12_107127700-107126283.sub_1 TRANS 0.02 531 NO NO NO NO
hgchr14_38360355-38359017.sub_1 - Chr12_53955409-53954513.sub_0 TRANS 0.02 359 NO NO NO NO
hgchr14_101380597-101380249 - Chr12_105258345-105257598 TRANS 0.02 353 NO NO NO NO
hgchr14_76489329-76489601 - Chr12_82157566-82157737 TRANS 0.02 353 NO NO NO NO
hgchr14_95566660-95566980 - Chr12_100164313-100164594 TRANS 0.021 250 NO NO NO NO
hgchr14_89527383-89527020 - Chr12_94550984-94550726 NOTRANS 0.021 360 NO YES NO NO
hgchr14_30180586-30180116 - Chr12_46612387-46612125 NOTRANS 0.021 266 NO NO NO NO
hgchr14_97217522-97217861 - Chr12_101455725-101455881 NOTRANS 0.021 171 NO NO NO NO
hgchr14_104089800-104090074 - Chr12_107216044-107216343 NOTRANS 0.021 415 NO NO NO YES
hgchr14_93533836-93533061 - Chr12_98048102-98047951 NOTRANS 0.021 427 YES NO NO NO
hgchr14_100021560-100021916 - Chr12_103747340-103747539 NOTRANS 0.021 316 NO NO NO NO
hgchr14_90081298-90081739 - ChrUnRandom_42716271-42716463 NOTRANS 0.021 413 NO NO NO NO
hgchr14_86064184-86064674 - Chr12_91382018-91382354 NOTRANS 0.021 184 NO NO NO NO
hgchr14_76746929-76746508 - Chr12_82382752-82382480 TRANS 0.021 358 NO NO NO NO
hgchr14_103960514-103960161 - Chr12_107121507-107121041 TRANS 0.022 420 NO NO NO YES
hgchr14_68333239-68333505 - Chr12_75414883-75415003 NOTRANS 0.022 196 NO YES YES YES
hgchr14_104364112-104364303 - Chr8_104888143-104888295 TRANS 0.022 214 NO NO NO NO
hgchr14_100611181-100610071.sub_1 - Chr12_104500621-104499812.sub_0 TRANS 0.022 442 NO NO NO NO
hgchr14_92628056-92628663 - Chr12_97365275-97366215 NOTRANS 0.022 438 YES NO NO NO
hgchr14_89582041-89581899 - Chr12_94593527-94593053 NOTRANS 0.022 563 NO NO NO YES
hgchr14_98938379-98937907 - Chr12_102859146-102858772 NOTRANS 0.023 399 NO NO NO YES
hgchr14_63555400-63555182 - Chr12_71227417-71227006 NOTRANS 0.023 327 NO NO NO NO
hgchr14_89517297-89516891 - Chr12_94543830-94543584 TRANS 0.023 315 NO YES NO NO
hgchr14_35836087-35836527 - Chr12_51519114-51519529 TRANS 0.023 337 NO NO NO YES
hgchr14_88797390-88796179.sub_1 - Chr12_93890114-93889579.sub_0 TRANS 0.023 395 NO YES NO YES
hgchr14_99695160-99694770 - Chr12_103455094-103454668 TRANS 0.023 406 NO NO NO NO
hgchr14_99106438-99106677 - Chr12_102994745-102995099 NOTRANS 0.023 503 NO NO YES NO
hgchr14_105378094-105379371 - Chr12_108168802-108169213 NOTRANS 0.023 592 YES YES NO NO
hgchr14_76541672-76541015 - Chr12_82192817-82192449 TRANS 0.024 454 NO NO NO YES
hgchr14_103409015-103408414 - Chr12_106684493-106683960 TRANS 0.024 512 YES NO NO NO
hgchr14_75590746-75591096 - Chr12_81460386-81460808 TRANS 0.024 363 NO NO NO NO
hgchr14_100219703-100220955 - Chr12_104164104-104165268 NOTRANS 0.024 399 NO YES NO NO
hgchr14_55846423-55846727 - Chr14_40934223-40934459 NOTRANS 0.024 248 NO NO NO NO
hgchr14_97949942-97949697 - Chr12_102075448-102075316 NOTRANS 0.025 236 NO NO NO NO
hgchr14_93332027-93331761 - Chr12_97932242-97931759 TRANS 0.025 345 NO NO NO NO
hgchr14_101169466-101168602.sub_1 - Chr12_105124937-105124726.sub_0 NOTRANS 0.025 360 YES NO NO NO
hgchr14_104107489-104107126.sub_0 - Chr12_107230953-107230075.sub_0 NOTRANS 0.025 550 NO NO NO NO
hgchr14_104983910-104982918.sub_0 - Chr12_107871551-107870772.sub_0 NOTRANS 0.026 465 YES NO NO NO
hgchr14_61023284-61024040 - Chr12_69003292-69003442 NOTRANS 0.026 287 NO NO NO NO
hgchr14_103909732-103910441 - Chr12_107077461-107078042 TRANS 0.026 466 NO NO NO YES
hgchr14_94947700-94948480 - Chr12_99640239-99640784 TRANS 0.027 413 YES NO NO NO
hgchr14_96495796-96495293 - Chr12_100848685-100848488 TRANS 0.027 319 NO NO NO NO
hgchr14_54351855-54351276 - Chr14_39792598-39792345 TRANS 0.027 475 NO NO NO NO
hgchr14_101270300-101270960 - Chr12_105176660-105177000 NOTRANS 0.027 349 NO NO NO YES
hgchr14_100356526-100356803 - Chr12_104283984-104284255 TRANS 0.027 233 NO NO NO YES
hgchr14_93280663-93281866 - Chr12_97891839-97892885 TRANS 0.028 498 NO NO NO NO
hgchr14_94614899-94616012.sub_0 - Chr12_99397803-99399578.sub_0 NOTRANS 0.028 414 NO NO NO NO
hgchr14_104365204-104364464 - Chr5_127170270-127170129 TRANS 0.029 345 NO NO YES NO
hgchr14_104848937-104849786 - Chr12_107765307-107766104 TRANS 0.029 473 NO NO NO NO
hgchr14_44925647-44925995 - Chr12_60503260-60503589 TRANS 0.029 281 NO NO NO NO
hgchr14_60916863-60918071 - Chr12_68919800-68920148 NOTRANS 0.029 280 YES NO NO NO
hgchr14_102232133-102232821 - Chr12_105833671-105834102 NOTRANS 0.029 315 NO YES YES NO
hgchr14_104766179-104765942 - Chr12_107725897-107725383 NOTRANS 0.029 382 YES YES NO NO
hgchr14_99667674-99667493 - Chr12_103430500-103430286 NOTRANS 0.029 282 NO NO NO NO
hgchr14_23219562-23219265.sub_0 - Chr14_47187419-47186307.sub_0 NOTRANS 0.03 391 NO NO NO NO
hgchr14_103755063-103755452.sub_0 - Chr12_106971177-106972227.sub_0 NOTRANS 0.03 411 NO NO NO NO
hgchr14_105126574-105126196 - Chr12_108012014-108011645 NOTRANS 0.03 437 YES NO NO NO
hgchr14_101514810-101515128 - Chr12_105359615-105360047 NOTRANS 0.03 263 NO NO NO NO
hgchr14_104098063-104098845 - Chr12_107223118-107223797 TRANS 0.03 434 NO NO NO NO

chr19


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 124 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr19_4629425-4630844 - Chr17_54465731-54466511 TRANS 0.001 680 NO YES NO NO
hgchr19_482170-481847.sub_0 - Chr10_79578204-79577027.sub_0 TRANS 0.001 591 NO NO NO YES
hgchr19_4823842-4823737 - Chr17_54569814-54569391 NOTRANS 0.001 545 NO NO NO YES
hgchr19_53486676-53486290 - Chr17_20345011-20344247 NOTRANS 0.001 479 NO YES NO YES
hgchr19_2690561-2690231 - Chr10_80945565-80945297 NOTRANS 0.002 401 YES YES NO YES
hgchr19_4823737-4823842 - Chr17_54569391-54569814 NOTRANS 0.002 476 NO NO NO NO
hgchr19_703722-703960.sub_0 - Chr8_46503646-46504620.sub_1 NOTRANS 0.002 545 YES NO NO NO
hgchr19_63778731-63779515 - ChrUnRandom_89346516-89347041 NOTRANS 0.002 531 NO NO NO NO
hgchr19_51408299-51408860 - Chr19_58307180-58307368 NOTRANS 0.003 390 NO NO NO NO
hgchr19_1737731-1738058 - Chr10_80431467-80431862 TRANS 0.003 546 NO NO NO YES
hgchr19_1037628-1037027 - Chr10_79928019-79927615 TRANS 0.003 580 YES YES YES YES
hgchr19_6323767-6323276 - Chr17_55328439-55328009 NOTRANS 0.003 374 YES NO NO NO
hgchr19_53486290-53486676 - Chr17_20344247-20345011 NOTRANS 0.003 513 NO YES NO NO
hgchr19_4601848-4601358 - Chr17_54449955-54449680 NOTRANS 0.003 397 YES NO NO NO
hgchr19_797744-797638 - Chr10_79779292-79778979 TRANS 0.004 413 NO NO NO YES
hgchr19_1309472-1310814 - Chr10_80132344-80132900 NOTRANS 0.004 451 YES NO NO NO
hgchr19_661714-661869 - Chr10_79691762-79692028 NOTRANS 0.004 365 NO YES NO NO
hgchr19_16507661-16508404 - Chr8_71504987-71505950 TRANS 0.004 476 NO NO NO NO
hgchr19_2254260-2254582 - Chr10_80748767-80749026 NOTRANS 0.005 398 NO NO NO YES
hgchr19_1161258-1160627 - Chr10_80015909-80015707 NOTRANS 0.005 428 YES YES NO YES
hgchr19_6222520-6222215 - Chr17_55258836-55258469 NOTRANS 0.005 526 NO NO NO NO
hgchr19_388020-387799 - Chr10_79522722-79522375 NOTRANS 0.006 403 YES NO NO NO
hgchr19_6165055-6165609 - Chr17_55226231-55226641 TRANS 0.006 499 YES NO NO NO
hgchr19_47063738-47064695.sub_0 - Chr7_13624890-13627209.sub_1 TRANS 0.006 630 NO NO YES NO
hgchr19_750464-750914 - Chr10_79753098-79753432 TRANS 0.006 442 NO YES NO YES
hgchr19_16508404-16507661.sub_0 - Chr8_71505950-71504987.sub_0 TRANS 0.007 619 NO NO NO YES
hgchr19_376298-376745 - Chr10_79519077-79519455 NOTRANS 0.007 504 NO YES NO YES
hgchr19_392220-391946 - Chr10_79526722-79526374 TRANS 0.007 459 YES NO NO YES
hgchr19_6468424-6467460.sub_0 - Chr17_55427785-55427369.sub_0 TRANS 0.007 455 NO NO NO YES
hgchr19_34287757-34288191 - Chr7_28001204-28001449 NOTRANS 0.008 442 NO NO NO NO
hgchr19_5595837-5596339 - Chr17_54925022-54925299 NOTRANS 0.008 370 NO YES YES NO
hgchr19_1859656-1859225 - Chr10_80512323-80511650 TRANS 0.008 428 YES NO NO YES
hgchr19_17212974-17213552 - Chr8_70412043-70412425 TRANS 0.008 583 NO YES YES YES
hgchr19_17324412-17323481.sub_0 - Chr8_70531861-70531360.sub_0 NOTRANS 0.008 493 YES YES NO NO
hgchr19_16365835-16366505 - Chr8_71405339-71405670 TRANS 0.008 349 NO NO NO YES
hgchr19_5015030-5014705 - Chr17_54643657-54643115 NOTRANS 0.009 378 NO NO NO YES
hgchr19_244345-244844 - Chr10_79430668-79431151 NOTRANS 0.009 510 NO NO NO YES
hgchr19_5646435-5645932 - Chr17_54945579-54945322 TRANS 0.01 531 YES YES NO YES
hgchr19_34329771-34329512 - Chr7_28035999-28035381 NOTRANS 0.01 349 NO NO NO YES
hgchr19_2157544-2157673 - Chr10_80688831-80689112 TRANS 0.011 285 YES NO NO NO
hgchr19_60591665-60592317 - Chr7Random_10564106-10564544 TRANS 0.011 420 YES NO NO NO
hgchr19_1324741-1325418 - Chr10_80143359-80143753 TRANS 0.012 587 YES YES YES YES
hgchr19_1876810-1876397 - Chr10_80522937-80522745 TRANS 0.012 346 YES YES YES NO
hgchr19_2471732-2471970 - Chr10_80860978-80861333 NOTRANS 0.012 407 YES NO NO YES
hgchr19_11021784-11023018 - Chr9_21632138-21632772 NOTRANS 0.012 635 YES NO NO NO
hgchr19_5286281-5286049 - Chr17_54751305-54751000 NOTRANS 0.013 327 YES NO NO YES
hgchr19_16835615-16835821 - Chr8_71778821-71779055 TRANS 0.013 310 NO NO NO YES
hgchr19_1066734-1066953 - Chr10_79960386-79960717 TRANS 0.013 495 NO YES NO NO
hgchr19_34581657-34581490 - Chr7_28266167-28265674 TRANS 0.013 344 NO NO NO NO
hgchr19_53076541-53076782 - ChrUnRandom_92039638-92039945 NOTRANS 0.014 219 NO NO NO NO
hgchr19_17427920-17427792 - Chr8_70595982-70595717 TRANS 0.014 307 YES NO NO YES
hgchr19_2301895-2302408 - Chr10_80774686-80775025 NOTRANS 0.015 322 NO NO NO YES
hgchr19_835071-835728 - Chr10_79797801-79798260 TRANS 0.015 406 NO NO NO YES
hgchr19_2175750-2176364 - Chr10_80698492-80698717 NOTRANS 0.016 388 YES YES NO YES
hgchr19_8980201-8980987 - Chr9_18538226-18538633 TRANS 0.016 412 NO NO NO NO
hgchr19_754545-752772.sub_0 - Chr10_79755283-79753522.sub_1 TRANS 0.016 513 NO YES NO NO
hgchr19_7607870-7607605 - Chr8_3593482-3592795 TRANS 0.016 325 YES YES NO NO
hgchr19_4728228-4728045 - Chr17_54529769-54529599 NOTRANS 0.016 302 NO NO NO NO
hgchr19_459022-459571 - Chr10_79566482-79567636 NOTRANS 0.016 522 NO YES YES NO
hgchr19_14757259-14756722 - Chr8_83048539-83047762 TRANS 0.016 561 NO NO NO NO
hgchr19_1082535-1082853 - Chr10_79971590-79972160 TRANS 0.016 483 NO YES YES NO
hgchr19_2078443-2078214 - Chr10_80631494-80631174 TRANS 0.017 330 YES NO NO YES
hgchr19_1124462-1124092 - Chr10_79998892-79998477 NOTRANS 0.018 386 NO YES YES YES
hgchr19_2562251-2561764 - Chr10_80898736-80898205 NOTRANS 0.018 563 YES NO NO NO
hgchr19_16572424-16570172.sub_1 - Chr8_71546646-71545464.sub_0 NOTRANS 0.018 535 YES NO NO YES
hgchr19_4531263-4530591.sub_0 - Chr17_54417594-54416769.sub_0 TRANS 0.018 498 NO NO NO NO
hgchr19_6188064-6188485 - Chr17_55238466-55238963 TRANS 0.019 328 NO NO NO YES
hgchr19_1322083-1322255 - Chr10_80142135-80142433 TRANS 0.019 319 NO NO YES YES
hgchr19_14756722-14757259 - Chr8_83047762-83048539 TRANS 0.019 441 NO NO NO NO
hgchr19_4767213-4766975 - Chr17_54548159-54547467 TRANS 0.02 362 YES YES YES YES
hgchr19_34962816-34962548 - ChrUnRandom_65897915-65897457 NOTRANS 0.02 335 NO NO NO NO
hgchr19_16818948-16819549 - Chr8_71767016-71767343 TRANS 0.02 421 NO NO NO YES
hgchr19_4929234-4928804.sub_0 - Chr17_54610828-54609861.sub_1 TRANS 0.021 504 YES NO NO NO
hgchr19_1573457-1574380.sub_0 - Chr10_80324976-80325854.sub_1 NOTRANS 0.021 422 NO NO NO YES
hgchr19_1077587-1077752 - Chr10_79968532-79968687 TRANS 0.021 351 NO YES YES NO
hgchr19_2077681-2078145 - Chr10_80630642-80631104 TRANS 0.021 398 NO NO NO NO
hgchr19_16841223-16840464.sub_0 - Chr8_71783477-71782495.sub_0 NOTRANS 0.021 426 NO NO NO NO
hgchr19_5552154-5551281.sub_0 - Chr17_54898710-54898546.sub_0 NOTRANS 0.022 415 NO YES NO YES
hgchr19_34243674-34242559.sub_0 - Chr7_27952124-27951801.sub_0 TRANS 0.022 366 NO NO NO NO
hgchr19_16346545-16346101 - Chr8_71389212-71388777 NOTRANS 0.023 408 YES YES NO YES
hgchr19_455771-455558 - Chr10_79564785-79564592 TRANS 0.023 360 NO YES YES YES
hgchr19_5034974-5033524.sub_0 - Chr17_54655087-54654246.sub_0 TRANS 0.023 539 NO NO NO YES
hgchr19_367755-367031 - Chr10_79514615-79514076 TRANS 0.023 446 YES YES NO NO
hgchr19_42586109-42586750 - Chr7_3375856-3376136 TRANS 0.023 287 NO NO NO NO
hgchr19_4450724-4451287 - Chr17_54378699-54378906 TRANS 0.024 410 NO YES NO NO
hgchr19_2181781-2183736.sub_0 - Chr10_80702864-80704335.sub_0 TRANS 0.025 654 YES YES NO NO
hgchr19_16378043-16376642.sub_1 - Chr8_71413703-71413434.sub_0 TRANS 0.025 401 NO NO NO NO
hgchr19_1596922-1597346 - Chr10_80333481-80334975 TRANS 0.025 468 NO NO NO NO
hgchr19_4393343-4395344 - Chr17_54346911-54347620 TRANS 0.025 564 NO YES YES NO
hgchr19_4652840-4653027 - Chr17_54482179-54482406 TRANS 0.025 366 NO NO NO YES
hgchr19_5943801-5944519 - Chr17_55106372-55107017 NOTRANS 0.025 551 NO YES NO NO
hgchr19_47064695-47063738.sub_0 - Chr7_13627209-13624890.sub_0 TRANS 0.025 489 NO YES YES NO
hgchr19_4326801-4329254.sub_2 - Chr17_54303577-54304772.sub_0 TRANS 0.026 643 NO NO NO YES
hgchr19_17635261-17634758 - Chr8_70695201-70694860 TRANS 0.026 319 NO YES YES NO
hgchr19_5048719-5049280 - Chr17_54660549-54661823 TRANS 0.026 716 NO YES NO NO
hgchr19_4443091-4442836 - Chr17_54375776-54375584 TRANS 0.026 320 NO YES YES NO
hgchr19_41604238-41604036 - Chr12_79354992-79354573 TRANS 0.026 374 YES YES NO NO
hgchr19_17442727-17443920 - Chr8_70603827-70604367 TRANS 0.026 391 YES YES NO NO
hgchr19_33376997-33377493 - Chr7_27424124-27424486 NOTRANS 0.026 285 NO NO NO YES
hgchr19_6180889-6181553 - Chr17_55235875-55236818 NOTRANS 0.026 427 NO NO NO NO
hgchr19_16355898-16356184 - Chr8_71398983-71399328 TRANS 0.026 322 YES NO YES YES
hgchr19_1169404-1169156 - Chr10_80022035-80021463 TRANS 0.027 371 NO YES NO NO
hgchr19_1940994-1940375 - Chr10_80552709-80552188 NOTRANS 0.027 585 YES YES NO YES
hgchr19_16562107-16561566 - Chr8_71538881-71538520 TRANS 0.027 426 NO NO YES YES
hgchr19_1995546-1996041 - Chr10_80578826-80579369 TRANS 0.027 448 NO NO NO NO
hgchr19_4923238-4922941 - Chr17_54607210-54606710 TRANS 0.027 439 NO NO NO NO
hgchr19_10883607-10882867 - Chr9_21515831-21515179 TRANS 0.027 570 NO NO NO NO
hgchr19_17165028-17165403 - Chr8_70381410-70381598 TRANS 0.027 334 NO NO NO NO
hgchr19_935236-934890 - Chr10_79856581-79856362 TRANS 0.027 270 YES YES NO YES
hgchr19_1242101-1242993 - Chr10_80084172-80084500 TRANS 0.028 522 NO NO NO NO
hgchr19_5018282-5019697.sub_1 - Chr17_54644781-54646549.sub_2 NOTRANS 0.028 691 YES NO NO YES
hgchr19_1335435-1335003 - Chr10_80151029-80150491 TRANS 0.028 498 NO NO NO NO
hgchr19_1873534-1873958 - Chr10_80519350-80519611 NOTRANS 0.028 280 YES YES NO NO
hgchr19_17238969-17238676 - Chr8_70429769-70429640 NOTRANS 0.028 219 NO YES YES NO
hgchr19_9817305-9818140 - Chr9_20581150-20581567 NOTRANS 0.029 406 NO YES NO NO
hgchr19_20575551-20576093 - Chr7_5580108-5580586 NOTRANS 0.029 313 NO NO NO NO
hgchr19_1369175-1368545 - Chr10_80176082-80175799 NOTRANS 0.029 331 NO NO NO NO
hgchr19_7449302-7450008 - Chr8_3374570-3374779 TRANS 0.029 513 NO NO NO NO
hgchr19_17657858-17657308 - Chr8_70703837-70703596 NOTRANS 0.029 295 NO YES YES NO
hgchr19_60896498-60897110 - Chr7Random_45343751-45344150 TRANS 0.03 336 YES NO NO NO
hgchr19_47307814-47308045 - Chr7_13850744-13850955 NOTRANS 0.03 266 YES YES NO NO
hgchr19_481847-482170 - Chr10_79577027-79578204 TRANS 0.03 489 NO NO NO NO
hgchr19_691860-691498 - Chr10_79713749-79713470 NOTRANS 0.03 437 NO YES YES NO
hgchr19_2036273-2036023 - Chr10_80603381-80603168 TRANS 0.03 260 YES NO NO NO

chr20


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 199 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr20_16676416-16676239 - Chr2_142828860-142828449 NOTRANS 0 361 NO NO NO NO
hgchr20_58339404-58339870 - Chr2_178409615-178410899 TRANS 0 628 YES NO NO NO
hgchr20_61905791-61906242.sub_0 - Chr2_181124299-181125904.sub_0 TRANS 0 651 NO NO NO NO
hgchr20_54982272-54981610 - Chr2_172821230-172820305 NOTRANS 0 580 NO YES NO NO
hgchr20_62330251-62331456 - Chr2_181505808-181506410 TRANS 0 834 NO NO NO NO
hgchr20_34928284-34927172 - Chr2_157144195-157143873 TRANS 0 609 NO NO NO NO
hgchr20_62331456-62330251 - Chr2_181506410-181505808 TRANS 0 868 NO NO NO NO
hgchr20_4902545-4901925 - Chr2_131876886-131876196 TRANS 0 465 NO YES NO NO
hgchr20_50212652-50213023 - Chr2_169002347-169002913 TRANS 0 622 YES NO NO YES
hgchr20_16209225-16207355.sub_1 - Chr2_142377269-142376654.sub_0 TRANS 0.001 487 NO NO NO NO
hgchr20_24593220-24592753 - Chr2_150065716-150064766 NOTRANS 0.001 503 NO NO NO NO
hgchr20_3547620-3547882 - Chr2_130757156-130757547 TRANS 0.001 663 YES NO NO NO
hgchr20_4901925-4902545 - Chr2_131876196-131876886 TRANS 0.001 456 NO YES NO NO
hgchr20_25552704-25553538 - Chr2_151102791-151103211 TRANS 0.001 647 YES YES YES NO
hgchr20_23290494-23290097 - Chr2_148433445-148433155 TRANS 0.001 442 NO YES NO NO
hgchr20_54643724-54644211 - Chr2_172618050-172618258 TRANS 0.001 341 NO YES NO NO
hgchr20_50749158-50749630 - Chr2_169439071-169439256 NOTRANS 0.001 297 NO NO NO NO
hgchr20_25319688-25319964 - Chr2_150968239-150968596 TRANS 0.001 446 YES NO NO NO
hgchr20_15766607-15765987 - Chr2_141900934-141900568 NOTRANS 0.001 403 YES NO NO NO
hgchr20_51194894-51195336 - Chr2_169848438-169848752 NOTRANS 0.001 447 NO YES NO YES
hgchr20_23055657-23057045 - Chr2_148252455-148253429 TRANS 0.002 655 NO NO NO NO
hgchr20_40991061-40990923 - Chr2_162466562-162465908 NOTRANS 0.002 410 NO NO NO NO
hgchr20_60988198-60985820.sub_0 - Chr2_180353435-180352931.sub_0 NOTRANS 0.002 519 NO NO NO YES
hgchr20_10437912-10436706.sub_1 - Chr2_136700371-136698935.sub_0 TRANS 0.003 446 NO NO NO YES
hgchr20_37102389-37103885 - Chr2_158922658-158922877 TRANS 0.003 474 NO YES YES NO
hgchr20_57040971-57041796 - Chr2_174531608-174531848 TRANS 0.003 531 NO NO NO NO
hgchr20_59766421-59765576 - Chr2_179478083-179477424 TRANS 0.003 539 NO NO NO NO
hgchr20_56508379-56507957 - Chr2_173897845-173897548 TRANS 0.004 429 NO NO NO NO
hgchr20_24950525-24950285 - Chr2_150694215-150693315 TRANS 0.004 341 YES NO NO NO
hgchr20_51562384-51562123 - Chr2_170149680-170149331 TRANS 0.004 505 NO NO NO YES
hgchr20_61696434-61695820 - Chr2_180946025-180945572 NOTRANS 0.004 451 NO NO NO NO
hgchr20_59818309-59818854 - Chr2_179505668-179506072 TRANS 0.004 549 NO YES NO YES
hgchr20_55939007-55938361 - Chr2_173432558-173432055 TRANS 0.004 459 NO NO NO NO
hgchr20_11151440-11151800 - Chr2_137421173-137422110 NOTRANS 0.004 313 NO NO NO NO
hgchr20_57392026-57391754 - Chr2_174907477-174907108 TRANS 0.005 366 NO NO NO YES
hgchr20_23287096-23286564 - Chr2_148431400-148430564 NOTRANS 0.005 469 NO NO NO NO
hgchr20_8794330-8795021 - Chr2_135206366-135206501 NOTRANS 0.005 291 NO NO NO NO
hgchr20_59469703-59470081 - Chr2_179279517-179280066 NOTRANS 0.005 469 NO NO NO YES
hgchr20_44699974-44700674 - Chr2_165524070-165524347 TRANS 0.005 477 NO NO NO YES
hgchr20_61871690-61873535.sub_1 - Chr2_181094871-181095300.sub_0 NOTRANS 0.005 490 YES NO YES NO
hgchr20_54485593-54485971 - Chr2_172509885-172510122 TRANS 0.006 369 NO NO NO NO
hgchr20_62258612-62259549 - Chr2_181448647-181449931 NOTRANS 0.006 718 YES NO NO NO
hgchr20_24971549-24970208 - Chr2_150713596-150713285 TRANS 0.006 505 YES NO NO NO
hgchr20_8795021-8794330 - Chr2_135206501-135206366 NOTRANS 0.007 371 NO NO NO NO
hgchr20_61174174-61174389.sub_0 - Chr2_180503616-180505184.sub_1 TRANS 0.007 535 NO NO NO NO
hgchr20_57041796-57040971 - Chr2_174531848-174531608 TRANS 0.007 500 YES NO NO NO
hgchr20_25425710-25426822 - Chr2_151026924-151027459 TRANS 0.007 539 NO NO NO NO
hgchr20_58043058-58043510 - Chr2_178182624-178182978 NOTRANS 0.007 417 YES NO NO NO
hgchr20_3017032-3016762 - Chr2_130333760-130333534 TRANS 0.007 302 NO NO NO NO
hgchr20_34083059-34082706 - Chr2_156439735-156439443 TRANS 0.007 432 NO NO NO NO
hgchr20_59459790-59458545 - Chr2_179273121-179272829 NOTRANS 0.008 468 NO NO NO NO
hgchr20_6646635-6646421 - Chr2_133261159-133260246 NOTRANS 0.008 258 NO NO NO NO
hgchr20_59824941-59825950 - Chr2_179510900-179511343 TRANS 0.008 500 NO NO NO NO
hgchr20_57142785-57142330 - Chr2_174646983-174646720 NOTRANS 0.008 368 NO NO NO YES
hgchr20_47986655-47987396 - Chr2_167566872-167567700 TRANS 0.009 485 YES YES NO YES
hgchr20_56703071-56703354 - Chr2_174179265-174179421 TRANS 0.009 424 NO YES NO NO
hgchr20_22333397-22333600 - Chr2_147631668-147631830 NOTRANS 0.009 211 NO NO NO NO
hgchr20_58801241-58800966 - Chr2_178772836-178772569 NOTRANS 0.009 346 NO NO NO NO
hgchr20_24659315-24659708 - Chr2_150118869-150119384 TRANS 0.009 362 NO NO NO NO
hgchr20_37059428-37059790 - Chr2_158886862-158887130 TRANS 0.009 416 NO NO NO YES
hgchr20_61906242-61905791.sub_0 - Chr2_181125904-181124299.sub_1 TRANS 0.01 455 NO NO NO YES
hgchr20_57822323-57823026 - Chr2_177998526-177998885 NOTRANS 0.01 474 NO NO NO YES
hgchr20_47755232-47755644 - Chr2_167406468-167406732 NOTRANS 0.01 285 NO NO NO NO
hgchr20_59770418-59771056 - Chr2_179480796-179481036 TRANS 0.01 301 NO NO NO NO
hgchr20_59718762-59719218 - Chr2_179452159-179452744 NOTRANS 0.01 422 NO NO NO NO
hgchr20_2977602-2977172 - Chr2_130314788-130314665 TRANS 0.01 262 NO YES NO YES
hgchr20_56600952-56600651 - Chr2_174071870-174071321 TRANS 0.01 328 NO NO NO NO
hgchr20_57749826-57749241 - Chr2_177941960-177941610 NOTRANS 0.01 470 NO NO NO YES
hgchr20_20589687-20589275 - Chr1_87127228-87127052 NOTRANS 0.01 296 NO NO NO NO
hgchr20_60248301-60247313 - Chr2_179808813-179807957 TRANS 0.01 510 NO YES NO NO
hgchr20_5701737-5701932 - Chr2_132441392-132441638 TRANS 0.01 358 YES NO NO NO
hgchr20_48532259-48532013 - Chr2_167969034-167968915 NOTRANS 0.01 229 NO NO NO NO
hgchr20_35934030-35934287 - Chr2_157954526-157954692 TRANS 0.011 421 NO YES YES YES
hgchr20_23080328-23080100 - Chr2_148277806-148277590 TRANS 0.011 351 NO NO NO NO
hgchr20_25406037-25405744 - Chr2_151013981-151013747 TRANS 0.011 445 YES NO NO NO
hgchr20_59675764-59674312 - Chr2_179424147-179423880 NOTRANS 0.011 590 NO NO NO NO
hgchr20_48796964-48797381 - Chr2_168158756-168159091 TRANS 0.011 277 NO NO NO YES
hgchr20_11152045-11152566 - Chr2_137421173-137422110 NOTRANS 0.012 383 NO NO NO NO
hgchr20_60815367-60814562 - Chr2_180192570-180192047 NOTRANS 0.012 409 NO NO NO NO
hgchr20_55101888-55101388 - Chr2_172896368-172896157 TRANS 0.012 520 NO NO NO NO
hgchr20_54524718-54525166 - Chr2_172528525-172528897 NOTRANS 0.012 310 YES NO NO NO
hgchr20_55027589-55027275 - Chr2_172851462-172851263 TRANS 0.012 364 NO NO NO YES
hgchr20_61293179-61292454 - Chr2_180589531-180589343 NOTRANS 0.012 473 NO NO NO YES
hgchr20_55478178-55478872 - Chr2_173143610-173144181 TRANS 0.012 454 NO NO NO YES
hgchr20_49358075-49358642 - Chr2_168509458-168509799 TRANS 0.012 345 NO NO NO NO
hgchr20_54381018-54381856 - Chr2_172422401-172422858 TRANS 0.012 339 YES YES NO NO
hgchr20_52712524-52713543.sub_0 - Chr2_170951114-170952717.sub_1 NOTRANS 0.012 406 NO YES YES NO
hgchr20_61050305-61051952.sub_1 - Chr2_180409846-180410808.sub_1 NOTRANS 0.012 483 NO YES NO NO
hgchr20_57612211-57611808 - Chr2_177829411-177829130 NOTRANS 0.012 321 NO NO NO NO
hgchr20_30701400-30701001 - Chr2_153646497-153646060 TRANS 0.012 437 YES NO NO NO
hgchr20_49169710-49169916 - Chr2_168411564-168411705 TRANS 0.013 270 NO NO NO YES
hgchr20_61807133-61805599.sub_0 - Chr2_181051007-181050793.sub_0 TRANS 0.013 482 NO YES YES NO
hgchr20_61796161-61795566 - Chr2_181043214-181042803 TRANS 0.013 481 NO YES NO YES
hgchr20_25398601-25398101 - Chr2_151008404-151008031 TRANS 0.013 414 NO NO NO NO
hgchr20_60800523-60799998 - Chr2_180181940-180180827 TRANS 0.014 559 NO NO NO NO
hgchr20_45304390-45305493 - Chr2_165872350-165872632 TRANS 0.014 553 YES NO NO NO
hgchr20_60794787-60795728 - Chr2_180176735-180177597 TRANS 0.014 482 NO NO NO NO
hgchr20_61983179-61983974 - Chr2_181195652-181195828 NOTRANS 0.014 358 NO NO NO NO
hgchr20_22363143-22363600 - Chr2_147664695-147665300 TRANS 0.014 394 NO NO NO YES
hgchr20_61624796-61624081 - Chr2_180877975-180876791 TRANS 0.014 514 YES YES NO NO
hgchr20_4800796-4801235 - Chr2_131818668-131818997 TRANS 0.014 377 YES NO NO NO
hgchr20_58899152-58899549 - Chr2_178854112-178854366 NOTRANS 0.014 410 NO NO NO YES
hgchr20_60166828-60166203 - Chr2_179740660-179740300 TRANS 0.015 427 NO NO NO NO
hgchr20_16207355-16209225.sub_0 - Chr2_142376654-142377269.sub_0 TRANS 0.015 412 NO NO NO NO
hgchr20_13785337-13785076 - Chr2_139987338-139987215 NOTRANS 0.015 204 NO NO NO NO
hgchr20_31363255-31363397 - Chr2_154284309-154284699 TRANS 0.015 314 NO NO NO YES
hgchr20_44055411-44055548 - Chr2_164995353-164995747 TRANS 0.015 350 NO NO NO NO
hgchr20_21919216-21918934 - Chr2_147325829-147325650 TRANS 0.016 231 NO NO NO NO
hgchr20_3511485-3511837 - Chr2_130729610-130729820 NOTRANS 0.016 305 NO NO NO NO
hgchr20_55385095-55386431 - Chr2_173077999-173078669 TRANS 0.016 405 YES YES NO NO
hgchr20_61533643-61533321 - Chr2_180792345-180792051 NOTRANS 0.017 275 NO NO NO YES
hgchr20_60307093-60307487 - Chr2_179854047-179854796 TRANS 0.017 501 YES NO NO NO
hgchr20_3855959-3855609 - Chr2_131047512-131047197 TRANS 0.017 289 YES YES YES NO
hgchr20_59502440-59501380 - Chr2_179310044-179309839 NOTRANS 0.017 425 NO NO NO NO
hgchr20_20526711-20527114 - Chr2_146170600-146170744 NOTRANS 0.017 261 NO YES NO NO
hgchr20_45937383-45938053 - Chr2_166258502-166258707 TRANS 0.017 352 NO NO NO NO
hgchr20_24978232-24977188 - Chr2_150723777-150723498 NOTRANS 0.017 408 NO NO NO NO
hgchr20_57942158-57943150 - Chr2_178095728-178096419 TRANS 0.017 705 NO YES YES NO
hgchr20_57129027-57128749 - Chr2_174630280-174630094 NOTRANS 0.017 274 NO NO NO NO
hgchr20_55666925-55666419 - Chr2_173296825-173296191 TRANS 0.018 441 YES NO NO NO
hgchr20_47941308-47940612.sub_0 - Chr2_167540824-167539265.sub_1 TRANS 0.018 700 YES YES YES NO
hgchr20_54668386-54668692 - Chr2_172636087-172636594 TRANS 0.018 381 NO NO NO YES
hgchr20_60497174-60497900 - Chr2_180031048-180031326 TRANS 0.018 446 NO NO NO YES
hgchr20_36904588-36904290 - Chr2_158765182-158764962 TRANS 0.018 241 NO NO YES NO
hgchr20_23029046-23029392 - Chr2_148210978-148211864 NOTRANS 0.018 365 NO NO NO NO
hgchr20_62310755-62310949 - Chr2_181486598-181486816 TRANS 0.018 300 NO NO NO NO
hgchr20_59794857-59794177 - Chr2_179492477-179492002 NOTRANS 0.019 513 NO NO NO NO
hgchr20_58853520-58852762 - Chr2_178812081-178811789 NOTRANS 0.019 353 NO NO NO YES
hgchr20_58688793-58688616 - Chr2_178675800-178675295 NOTRANS 0.019 236 NO NO NO NO
hgchr20_24885509-24884375 - Chr2_150638717-150638374 TRANS 0.019 330 NO NO NO NO
hgchr20_55183726-55184167 - Chr2_172938945-172939477 NOTRANS 0.019 318 NO NO NO NO
hgchr20_60218228-60218693 - Chr2_179783498-179783702 TRANS 0.02 369 NO NO NO YES
hgchr20_54666709-54666905 - Chr2_172633673-172634073 NOTRANS 0.02 516 NO NO NO NO
hgchr20_34153038-34152905 - Chr2_156492632-156492458 NOTRANS 0.02 221 NO NO NO NO
hgchr20_47987396-47986655 - Chr2_167567700-167566872 TRANS 0.02 420 YES NO NO NO
hgchr20_59324410-59324620 - Chr2_179178832-179178986 NOTRANS 0.02 323 NO NO NO YES
hgchr20_45305493-45304390 - Chr2_165872632-165872350 TRANS 0.02 384 YES NO NO NO
hgchr20_35394564-35394328 - Chr2_157475347-157475035 NOTRANS 0.021 389 NO NO NO NO
hgchr20_31958926-31959919 - Chr2_154788139-154788332 NOTRANS 0.021 286 NO YES NO NO
hgchr20_54394530-54394224 - Chr2_172429870-172429585 NOTRANS 0.021 359 NO YES NO NO
hgchr20_59702330-59701595 - Chr2_179443080-179442654 TRANS 0.021 362 NO NO NO YES
hgchr20_54668692-54668386 - Chr2_172636594-172636087 TRANS 0.022 272 NO NO NO YES
hgchr20_59885280-59887729.sub_3 - Chr2_179551701-179552059.sub_0 TRANS 0.022 454 NO NO NO NO
hgchr20_61424934-61424408 - Chr2_180699158-180698095 TRANS 0.022 476 NO NO NO NO
hgchr20_61375309-61375155 - Chr2_180656592-180655956 NOTRANS 0.022 389 YES YES YES NO
hgchr20_48958385-48958112 - Chr2_168254004-168253465 NOTRANS 0.022 282 YES NO NO NO
hgchr20_61293298-61293599 - Chr2_180589668-180589985 NOTRANS 0.022 280 YES NO NO YES
hgchr20_54589076-54588715 - Chr2_172568919-172568564 TRANS 0.022 377 NO NO NO YES
hgchr20_61161502-61161916 - Chr2_180496684-180496969 TRANS 0.022 437 NO NO NO YES
hgchr20_48620852-48622013 - Chr2_168032607-168032906 TRANS 0.022 352 YES NO NO NO
hgchr20_57943150-57942158 - Chr2_178096419-178095728 TRANS 0.022 573 NO YES YES NO
hgchr20_29643108-29642845 - Chr2_152789657-152789449 NOTRANS 0.022 286 NO NO NO NO
hgchr20_31362737-31362112 - Chr2_154284699-154284309 TRANS 0.023 559 NO NO NO YES
hgchr20_46818857-46819077 - Chr2_166722794-166723284 NOTRANS 0.023 350 NO NO NO YES
hgchr20_61805599-61807133.sub_0 - Chr2_181050793-181051007.sub_0 TRANS 0.023 422 NO YES YES NO
hgchr20_59378172-59379056 - Chr2_179224921-179225266 NOTRANS 0.023 437 YES NO NO NO
hgchr20_53133425-53133851 - Chr2_171287726-171288334 NOTRANS 0.023 327 NO NO NO NO
hgchr20_58342596-58342781 - Chr2_178409615-178410899 TRANS 0.024 309 YES NO NO NO
hgchr20_60486856-60486068 - Chr2_180024437-180023580 TRANS 0.024 443 YES NO NO NO
hgchr20_60978065-60979511 - Chr2_180345638-180346145 TRANS 0.024 482 YES NO NO NO
hgchr20_60495948-60495010 - Chr2_180030782-180030317 TRANS 0.024 492 NO NO NO YES
hgchr20_59818854-59818309 - Chr2_179506072-179505668 TRANS 0.024 386 NO YES NO YES
hgchr20_59887729-59885280.sub_2 - Chr2_179552059-179551701.sub_0 TRANS 0.025 531 NO NO NO NO
hgchr20_59873093-59873636 - Chr2_179544577-179545183 NOTRANS 0.025 441 NO NO NO YES
hgchr20_61444679-61444263 - Chr2_180709347-180709149 TRANS 0.025 310 NO NO NO NO
hgchr20_1852862-1853020 - Chr2_129367029-129367161 NOTRANS 0.025 270 YES NO NO NO
hgchr20_59493810-59495058 - Chr2_179294629-179295451 TRANS 0.025 430 NO NO NO NO
hgchr20_59782963-59782621 - Chr2_179487141-179486491 NOTRANS 0.026 511 NO NO NO NO
hgchr20_29689392-29689770 - Chr2_152817527-152817705 TRANS 0.026 331 NO YES NO YES
hgchr20_17563995-17562547 - Chr2_143720256-143719813 TRANS 0.026 502 NO NO NO NO
hgchr20_60437963-60438609 - Chr2_179988636-179988777 TRANS 0.026 212 NO NO NO NO
hgchr20_9276646-9276841 - Chr2_135667322-135667606 NOTRANS 0.026 270 YES YES NO NO
hgchr20_61483781-61482634 - Chr2_180748556-180747590 TRANS 0.026 532 NO NO NO NO
hgchr20_59649453-59649794 - Chr2_179406463-179407621 TRANS 0.027 403 NO YES NO NO
hgchr20_4801235-4800796 - Chr2_131818997-131818668 TRANS 0.027 351 NO NO NO NO
hgchr20_9266756-9267048 - Chr2_135657686-135658487 NOTRANS 0.027 218 NO NO NO NO
hgchr20_59420709-59419756 - Chr2_179250438-179250267 NOTRANS 0.027 250 NO NO NO NO
hgchr20_30944052-30944297 - Chr2_153861346-153861878 TRANS 0.027 440 NO NO NO YES
hgchr20_49519902-49520456 - Chr2_168594544-168595248 TRANS 0.027 409 YES YES NO NO
hgchr20_59532859-59531113.sub_1 - Chr2_179332289-179331380.sub_0 TRANS 0.027 453 NO NO NO NO
hgchr20_40221511-40221706 - Chr2_161668091-161668737 NOTRANS 0.028 332 NO NO NO NO
hgchr20_24190221-24190696 - Chr2_149382778-149383033 NOTRANS 0.028 243 NO NO NO NO
hgchr20_59677440-59677171 - Chr2_179424147-179423880 TRANS 0.028 470 NO NO NO NO
hgchr20_49675314-49675498 - Chr2_168715862-168716154 TRANS 0.029 489 NO NO NO YES
hgchr20_25226666-25226899 - Chr2_150895093-150895753 TRANS 0.029 363 NO YES NO NO
hgchr20_58043510-58043058 - Chr2_178182978-178182624 NOTRANS 0.029 284 YES NO NO NO
hgchr20_57818353-57818709 - Chr2_177991759-177992013 TRANS 0.029 184 NO NO NO YES
hgchr20_40221706-40221511 - Chr2_161668737-161668091 NOTRANS 0.029 360 NO NO NO NO
hgchr20_59075949-59075492 - Chr2_178981069-178980731 NOTRANS 0.029 343 NO NO NO NO
hgchr20_47643624-47643813 - Chr2_167333339-167333658 TRANS 0.029 293 NO NO NO NO
hgchr20_61269213-61269022 - Chr2_180572670-180572088 TRANS 0.03 264 NO NO NO NO
hgchr20_59669034-59669920 - Chr2_179421815-179422380 TRANS 0.03 465 NO NO NO NO
hgchr20_55386431-55385095 - Chr2_173078669-173077999 TRANS 0.03 349 YES YES NO NO
hgchr20_54644211-54643724 - Chr2_172618258-172618050 TRANS 0.03 268 NO YES NO NO
hgchr20_29893776-29893982 - Chr2_152993079-152993347 TRANS 0.03 376 NO NO NO NO
hgchr20_59611144-59610070 - Chr2_179382854-179382680 NOTRANS 0.03 354 YES NO NO NO
hgchr20_55780713-55781133 - Chr2_173384184-173384769 NOTRANS 0.03 409 NO NO NO YES
hgchr20_3591718-3590832 - Chr2_130791785-130791527 NOTRANS 0.03 457 NO NO NO NO
hgchr20_12798119-12799260 - Chr2_139069218-139069360 NOTRANS 0.03 285 NO NO NO NO

chr21


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 50 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr21_36355047-36354530.sub_0 - Chr16_94086305-94085034.sub_1 TRANS 0 607 YES YES YES YES
hgchr21_42546972-42546379 - Chr17_29693473-29693183 NOTRANS 0.001 541 NO NO NO NO
hgchr21_43694574-43693981 - Chr17_30477515-30476892 TRANS 0.001 623 NO NO NO YES
hgchr21_33332526-33331632.sub_0 - Chr16_91668889-91668603.sub_0 NOTRANS 0.001 409 NO NO NO NO
hgchr21_42516517-42516907 - Chr17_29667494-29667710 TRANS 0.002 560 NO NO NO NO
hgchr21_34198256-34198923 - Chr16_92390118-92390423 TRANS 0.002 461 YES YES NO NO
hgchr21_43592507-43593133 - Chr17_30397557-30398226 TRANS 0.003 573 NO NO NO YES
hgchr21_32607849-32607027.sub_0 - Chr16_91185496-91184504.sub_0 TRANS 0.003 505 YES NO NO NO
hgchr21_44796233-44797436.sub_0 - Chr10_77667516-77667934.sub_0 TRANS 0.004 500 NO NO NO NO
hgchr21_43059238-43058706 - Chr17_30069270-30068880 TRANS 0.005 456 NO NO NO YES
hgchr21_42573179-42572973 - Chr17_29708502-29708311 NOTRANS 0.006 293 NO NO NO YES
hgchr21_43511935-43511362 - Chr17_30326105-30325339 NOTRANS 0.006 517 NO NO NO YES
hgchr21_31717273-31716891 - Chr16_90466546-90466388 NOTRANS 0.007 394 NO NO NO YES
hgchr21_43155612-43156547.sub_0 - Chr17_30104560-30105143.sub_0 TRANS 0.007 503 NO YES NO YES
hgchr21_43516825-43516677.sub_0 - Chr17_30329487-30327367.sub_0 NOTRANS 0.008 495 NO NO NO NO
hgchr21_37177977-37177833 - Chr16_94934735-94934098 NOTRANS 0.009 439 YES NO NO NO
hgchr21_27745556-27744197.sub_0 - Chr16_86637401-86637024.sub_0 NOTRANS 0.009 296 NO NO NO NO
hgchr21_41206661-41206155.sub_0 - Chr16_98006511-98005491.sub_0 NOTRANS 0.009 365 NO NO NO NO
hgchr21_43321863-43321111 - Chr17_30203641-30203344 NOTRANS 0.009 442 NO NO NO NO
hgchr21_43385216-43385777 - Chr17_30246817-30247236 TRANS 0.01 418 NO NO NO YES
hgchr21_41961173-41962069.sub_0 - Chr16_98498559-98499565.sub_0 TRANS 0.01 511 NO NO NO YES
hgchr21_42377892-42377430 - Chr17_29572753-29572350 TRANS 0.011 418 NO NO NO NO
hgchr21_32562312-32561176.sub_1 - Chr16_91153428-91153242.sub_0 TRANS 0.011 421 NO YES NO NO
hgchr21_39643265-39643525.sub_0 - Chr16_96880499-96881329.sub_0 TRANS 0.012 401 YES NO NO NO
hgchr21_43693981-43694574 - Chr17_30476892-30477515 TRANS 0.012 557 NO NO NO YES
hgchr21_40112803-40112600 - Chr16_97216230-97215992 NOTRANS 0.012 197 NO NO NO YES
hgchr21_30811642-30811102 - Chr16_89330756-89330210 NOTRANS 0.013 373 NO NO NO YES
hgchr21_34352963-34352339 - Chr16_92506100-92505552 TRANS 0.013 414 NO NO NO YES
hgchr21_38727246-38726636 - Chr16_96119674-96119288 NOTRANS 0.013 400 NO NO NO NO
hgchr21_34205408-34203740.sub_1 - Chr16_92392666-92392322.sub_0 NOTRANS 0.015 437 NO NO NO NO
hgchr21_36842078-36843009.sub_1 - Chr16_94464757-94464999.sub_0 TRANS 0.016 388 NO NO NO NO
hgchr21_42122143-42121830 - Chr16_98612358-98611995 NOTRANS 0.016 278 NO NO NO NO
hgchr21_35003797-35004076 - Chr16_92999331-92999599 TRANS 0.016 331 NO NO NO NO
hgchr21_28554943-28554218 - Chr16_87196797-87196220 NOTRANS 0.017 262 NO NO NO NO
hgchr21_41542913-41542594.sub_0 - Chr16_98217152-98216223.sub_1 NOTRANS 0.018 365 NO NO NO YES
hgchr21_14737867-14737724 - Chr16_76170410-76170153 NOTRANS 0.019 303 NO NO NO NO
hgchr21_39675435-39674299.sub_1 - Chr16_96898551-96898294.sub_0 TRANS 0.02 452 YES YES NO NO
hgchr21_43518655-43519001.sub_0 - Chr17_30334599-30335640.sub_0 TRANS 0.022 416 NO NO NO NO
hgchr21_36188195-36186837.sub_0 - Chr16_93979619-93978512.sub_0 TRANS 0.022 416 NO NO NO NO
hgchr21_33619769-33619320 - Chr16_91950124-91949630 TRANS 0.025 346 NO YES NO NO
hgchr21_18744775-18744090.sub_0 - Chr16_79470180-79469138.sub_1 NOTRANS 0.025 286 NO NO NO NO
hgchr21_32371199-32370750 - Chr16_90995170-90994844 TRANS 0.025 365 NO NO NO NO
hgchr21_35004076-35003797 - Chr16_92999599-92999331 TRANS 0.026 356 NO NO NO NO
hgchr21_15336539-15336655 - Chr16_76710453-76710853 NOTRANS 0.026 283 NO YES YES NO
hgchr21_23982690-23982035.sub_0 - Chr16_83577267-83576438.sub_0 NOTRANS 0.026 294 NO NO NO YES
hgchr21_39315281-39316253.sub_0 - Chr16_96622439-96623372.sub_0 TRANS 0.027 432 YES NO NO NO
hgchr21_39904694-39905482 - Chr16_97075856-97076118 TRANS 0.027 368 NO NO NO NO
hgchr21_43609897-43607506.sub_2 - Chr17_30412063-30411336.sub_0 NOTRANS 0.028 531 NO NO NO YES
hgchr21_37304311-37303920 - Chr16_95040170-95039909 TRANS 0.029 444 NO NO NO NO
hgchr21_36714503-36714312 - Chr16_94392999-94392619 TRANS 0.029 317 NO NO NO YES

chr22


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 165 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchr22_45839650-45838284.sub_0 - Chr15_86820179-86818554.sub_1 TRANS 0 790 NO NO NO NO
hgchr22_45904896-45904302 - Chr15_86868082-86867614 TRANS 0 615 NO NO NO YES
hgchr22_21770076-21771152 - Chr10_74832646-74833049 NOTRANS 0 663 NO NO NO NO
hgchr22_46861884-46860059.sub_2 - Chr15_87623935-87623276.sub_0 TRANS 0 606 NO NO NO NO
hgchr22_43532946-43532270 - Chr15_85109244-85108766 TRANS 0.001 531 YES NO NO NO
hgchr22_45870665-45870213 - Chr15_86845739-86845139 TRANS 0.001 593 YES YES NO YES
hgchr22_46860059-46861884 - Chr15_87623276-87623935 TRANS 0.001 614 NO NO NO NO
hgchr22_38389959-38388936.sub_0 - Chr15_80707857-80707613.sub_0 NOTRANS 0.001 552 NO NO NO NO
hgchr22_48435238-48434848 - Chr15_89025038-89024821 TRANS 0.001 307 NO NO NO NO
hgchr22_22284053-22283061.sub_1 - ChrUnRandom_45019467-45019113.sub_0 NOTRANS 0.001 438 NO NO NO NO
hgchr22_47050498-47049814.sub_0 - Chr15_87791886-87790835.sub_0 TRANS 0.001 561 NO NO NO YES
hgchr22_45052958-45052282.sub_0 - Chr15_86237971-86237144.sub_1 TRANS 0.002 472 YES YES YES NO
hgchr22_47916861-47915247.sub_0 - Chr15_88538520-88537656.sub_0 NOTRANS 0.002 504 NO NO NO NO
hgchr22_34231856-34231510 - Chr8_74307082-74306443 NOTRANS 0.002 304 NO NO NO YES
hgchr22_40743547-40743067 - Chr15_82650875-82650295 NOTRANS 0.002 416 NO NO NO YES
hgchr22_36746501-36746273 - Chr15_79527690-79527049 TRANS 0.003 435 YES NO NO NO
hgchr22_35545131-35544784 - Chr15_78540144-78539692 NOTRANS 0.003 415 NO NO NO YES
hgchr22_42436903-42437622 - Chr15_84328673-84328844 NOTRANS 0.003 252 YES NO NO NO
hgchr22_45727469-45728465 - Chr15_86737031-86737224 TRANS 0.003 523 NO NO NO NO
hgchr22_43532270-43532946 - Chr15_85108766-85109244 TRANS 0.003 507 YES NO NO NO
hgchr22_45838284-45839650.sub_1 - Chr15_86818554-86820179.sub_0 TRANS 0.003 632 NO NO NO NO
hgchr22_47049814-47050498 - Chr15_87790835-87791886 TRANS 0.003 557 NO NO NO NO
hgchr22_20134863-20134075 - Chr16_17044599-17043928 TRANS 0.003 584 NO NO NO NO
hgchr22_48785671-48786118 - Chr15_89322963-89323411 TRANS 0.003 408 NO NO NO NO
hgchr22_44963002-44962766 - Chr15_86165234-86165078 TRANS 0.003 433 YES NO NO NO
hgchr22_37490850-37491358 - Chr15_80081841-80081983 TRANS 0.004 489 NO NO YES YES
hgchr22_47560375-47560758 - Chr15_88208446-88209157 NOTRANS 0.004 535 NO NO NO NO
hgchr22_46532487-46532061 - Chr15_87356671-87356335 NOTRANS 0.004 482 NO NO NO NO
hgchr22_16601887-16602360 - Chr6_121300165-121300288 NOTRANS 0.004 352 NO NO NO NO
hgchr22_36895269-36895676 - Chr15_79651161-79651860 NOTRANS 0.005 404 NO NO NO NO
hgchr22_47721707-47722169 - Chr15_88342430-88342919 TRANS 0.005 418 NO NO NO NO
hgchr22_34104407-34104624 - Chr8_74163385-74163510 NOTRANS 0.005 317 NO YES NO NO
hgchr22_47742398-47741719 - Chr15_88369464-88368859 TRANS 0.005 518 NO NO NO NO
hgchr22_37190239-37189904.sub_0 - Chr15_79846285-79845310.sub_0 NOTRANS 0.005 438 NO NO NO NO
hgchr22_36066701-36066903 - Chr15_78971573-78971937 TRANS 0.005 398 NO NO NO NO
hgchr22_40164946-40164430 - Chr15_82193900-82193530 TRANS 0.005 377 NO YES YES NO
hgchr22_19754534-19754785 - Chr16_15630081-15630763 TRANS 0.005 305 NO NO NO YES
hgchr22_49187102-49187584 - Chr15_89689632-89689934 TRANS 0.006 294 NO YES NO NO
hgchr22_47900394-47901003 - Chr15_88527146-88527955 TRANS 0.006 548 NO NO NO YES
hgchr22_38388936-38389959 - Chr15_80707613-80707857 NOTRANS 0.006 494 NO NO NO NO
hgchr22_45870213-45870665 - Chr15_86845139-86845739 TRANS 0.006 460 YES YES NO YES
hgchr22_48419032-48418571 - Chr15_89007247-89006637 NOTRANS 0.006 414 NO NO NO NO
hgchr22_36746273-36746501 - Chr15_79527049-79527690 NOTRANS 0.007 413 YES NO NO NO
hgchr22_43657533-43656966 - Chr15_85176923-85176330 NOTRANS 0.007 496 NO NO NO YES
hgchr22_47743147-47744442 - Chr15_88369928-88370352 TRANS 0.007 402 NO NO NO NO
hgchr22_48449215-48449015 - Chr15_89038941-89038201 TRANS 0.007 398 NO NO NO YES
hgchr22_47168258-47168478 - Chr15_87891728-87892053 NOTRANS 0.008 334 NO NO NO YES
hgchr22_48379689-48379861 - Chr15_88958478-88958752 TRANS 0.008 341 NO NO NO NO
hgchr22_48255073-48254629 - Chr15_88869981-88869215 TRANS 0.008 431 NO NO NO NO
hgchr22_45377343-45376968 - Chr15_86481541-86481253 TRANS 0.008 392 NO NO NO NO
hgchr22_42120689-42120916 - Chr15_84127823-84128099 NOTRANS 0.009 395 NO NO NO NO
hgchr22_47153523-47152876.sub_0 - Chr15_87877813-87876674.sub_0 TRANS 0.009 467 NO NO NO NO
hgchr22_44660461-44660173 - Chr15_85909554-85909350 NOTRANS 0.009 357 NO NO NO NO
hgchr22_37927722-37927028 - Chr15_80311711-80311248 TRANS 0.009 491 YES NO NO NO
hgchr22_48428179-48428401 - Chr15_89017462-89018130 NOTRANS 0.009 282 NO YES NO NO
hgchr22_45883368-45882687.sub_0 - Chr15_86853108-86851564.sub_0 TRANS 0.009 576 NO NO NO NO
hgchr22_47797697-47798497 - Chr15_88416084-88417006 TRANS 0.009 511 NO NO NO NO
hgchr22_47425127-47426624 - Chr15_88107694-88108289 TRANS 0.009 560 NO NO NO NO
hgchr22_36066903-36066701 - Chr15_78971937-78971573 TRANS 0.01 470 NO NO NO NO
hgchr22_45052282-45052958 - Chr15_86237144-86237971 TRANS 0.01 476 YES YES YES NO
hgchr22_47833001-47833751 - Chr15_88468248-88469847 TRANS 0.01 495 NO NO NO NO
hgchr22_47798497-47797697.sub_0 - Chr15_88417006-88416084.sub_0 TRANS 0.011 505 NO NO NO YES
hgchr22_44219164-44218489 - Chr15_85561535-85561365 TRANS 0.011 411 NO NO NO YES
hgchr22_47423304-47424313 - Chr15_88106206-88106927 TRANS 0.011 492 NO NO NO NO
hgchr22_44851077-44850626 - Chr15_86078283-86077853 NOTRANS 0.011 385 NO NO NO YES
hgchr22_44808039-44808226 - Chr15_86044935-86045412 NOTRANS 0.011 327 YES NO NO NO
hgchr22_45048327-45047546.sub_0 - Chr15_86235604-86234484.sub_1 TRANS 0.011 448 YES NO NO NO
hgchr22_36120860-36120615 - Chr15_79020704-79020268 TRANS 0.012 389 NO NO NO NO
hgchr22_47228300-47227716 - Chr15_87948334-87947901 TRANS 0.012 386 NO NO NO YES
hgchr22_48153636-48151895.sub_1 - Chr15_88773526-88772883.sub_0 TRANS 0.012 629 NO NO NO NO
hgchr22_36064359-36064524 - Chr15_78971573-78971937 TRANS 0.013 326 NO NO NO NO
hgchr22_41296071-41296383 - Chr15_83474844-83475180 NOTRANS 0.013 472 NO YES NO NO
hgchr22_17531582-17530860 - Chr16_17697462-17697239 TRANS 0.013 486 NO NO NO NO
hgchr22_47152876-47153523 - Chr15_87876674-87877813 TRANS 0.014 421 NO NO NO NO
hgchr22_43320279-43320177 - Chr15_84973891-84973563 NOTRANS 0.014 342 YES NO NO NO
hgchr22_18851875-18851323 - Chr10_75516291-75515935 NOTRANS 0.014 487 NO NO NO NO
hgchr22_21776263-21774832.sub_0 - Chr10_74839419-74838724.sub_0 TRANS 0.014 491 NO NO NO NO
hgchr22_42350933-42352236 - Chr15_84287455-84288135 TRANS 0.014 467 NO NO NO NO
hgchr22_48650819-48651265 - Chr15_89228276-89228852 NOTRANS 0.014 667 NO NO NO YES
hgchr22_47016175-47015470.sub_0 - Chr15_87755990-87754936.sub_0 NOTRANS 0.015 485 NO NO NO NO
hgchr22_48824103-48825505 - Chr15_89367292-89368064 TRANS 0.015 565 NO NO NO NO
hgchr22_47321465-47321334 - Chr15_88036082-88035518 NOTRANS 0.016 319 NO NO NO NO
hgchr22_46557158-46556439 - Chr15_87374274-87373947 TRANS 0.016 378 NO NO NO NO
hgchr22_43914828-43914578 - Chr15_85306011-85305516 NOTRANS 0.016 423 NO YES NO YES
hgchr22_42328624-42327456.sub_0 - Chr15_84268644-84267951.sub_0 TRANS 0.016 466 NO YES NO YES
hgchr22_34855022-34855291 - Chr15_77695994-77696673 NOTRANS 0.016 384 NO NO NO NO
hgchr22_46334729-46334307 - Chr15_87161858-87161466 TRANS 0.017 440 NO NO NO YES
hgchr22_38243221-38244099.sub_0 - Chr15_80585545-80587175.sub_0 TRANS 0.017 540 YES NO NO NO
hgchr22_21731512-21730892 - Chr10_74794482-74794099 TRANS 0.017 412 NO NO NO NO
hgchr22_38369720-38369458 - Chr15_80691818-80691580 TRANS 0.017 431 NO NO NO YES
hgchr22_48344349-48345165 - Chr15_88921658-88922995 TRANS 0.017 521 NO NO NO NO
hgchr22_45607273-45607645 - Chr15_86659610-86660329 NOTRANS 0.017 366 YES NO NO NO
hgchr22_47168561-47169809 - Chr15_87892136-87892688 TRANS 0.017 440 NO NO NO NO
hgchr22_47779240-47778644 - Chr15_88401250-88400733 TRANS 0.017 512 NO NO NO NO
hgchr22_34978485-34977722 - Chr15_77949188-77948869 TRANS 0.017 447 NO NO NO NO
hgchr22_47337338-47336781.sub_0 - Chr15_88048490-88047405.sub_0 NOTRANS 0.017 493 NO NO NO YES
hgchr22_44629702-44628805.sub_0 - Chr15_85885328-85884955.sub_0 NOTRANS 0.018 598 NO NO NO YES
hgchr22_45840988-45840509 - Chr15_86822962-86822442 TRANS 0.018 436 NO YES NO NO
hgchr22_45163659-45163262 - Chr15_86325151-86324697 NOTRANS 0.018 357 NO NO NO NO
hgchr22_49209901-49209574 - Chr15_89715363-89715098 TRANS 0.019 406 NO NO NO YES
hgchr22_43718733-43717980 - Chr15_85205002-85204882 NOTRANS 0.019 342 NO NO NO NO
hgchr22_47778644-47779240 - Chr15_88400733-88401250 TRANS 0.019 497 NO NO NO NO
hgchr22_41883873-41884668 - Chr15_83929953-83930722 TRANS 0.019 531 NO NO NO YES
hgchr22_36443553-36443256 - Chr15_79292745-79292481 NOTRANS 0.019 266 NO NO NO NO
hgchr22_42352236-42350933.sub_1 - Chr15_84288135-84287455.sub_0 TRANS 0.019 425 NO NO NO NO
hgchr22_47140532-47142556 - Chr15_87863575-87864094 NOTRANS 0.019 567 NO NO NO NO
hgchr22_47409614-47406302.sub_2 - Chr15_88096435-88095326.sub_0 TRANS 0.02 727 NO NO NO NO
hgchr22_43027036-43026418 - Chr15_84778854-84778460 NOTRANS 0.02 489 NO NO NO NO
hgchr22_16724836-16725219 - Chr6_121404740-121404891 NOTRANS 0.02 287 NO NO NO NO
hgchr22_45378065-45378345 - Chr15_86482136-86482856 TRANS 0.02 437 NO NO NO YES
hgchr22_48151895-48153636 - Chr15_88772883-88773526 NOTRANS 0.02 517 NO NO NO NO
hgchr22_39966085-39965579 - Chr15_82041692-82041539 TRANS 0.02 414 YES NO NO NO
hgchr22_42388098-42388384 - Chr15_84300912-84301136 NOTRANS 0.02 455 YES NO NO NO
hgchr22_42555948-42556273 - Chr15_84442670-84443166 TRANS 0.02 407 YES NO NO NO
hgchr22_48379072-48377686.sub_0 - Chr15_88957800-88957113.sub_0 TRANS 0.02 552 NO NO NO YES
hgchr22_47242463-47242024 - Chr15_87961875-87961120 NOTRANS 0.021 446 NO NO NO NO
hgchr22_48449015-48449215 - Chr15_89038201-89038941 TRANS 0.021 374 NO NO NO NO
hgchr22_43954341-43954148 - Chr15_85340432-85340264 TRANS 0.021 298 YES YES NO NO
hgchr22_23125781-23125391 - Chr10_75138648-75138176 NOTRANS 0.022 359 YES NO NO NO
hgchr22_22051472-22051975 - Chr16_17988097-17988783 NOTRANS 0.022 435 NO NO NO YES
hgchr22_48656592-48656857 - Chr15_89233117-89233290 NOTRANS 0.022 324 NO NO NO YES
hgchr22_47722169-47721707 - Chr15_88342919-88342430 NOTRANS 0.022 409 NO NO NO NO
hgchr22_43649268-43648604 - Chr15_85171831-85171408 NOTRANS 0.022 457 NO NO NO NO
hgchr22_42556273-42555948 - Chr15_84443166-84442670 TRANS 0.022 395 YES NO NO NO
hgchr22_48775214-48774952 - Chr15_89310146-89309952 TRANS 0.022 365 NO NO NO NO
hgchr22_44628805-44629702.sub_1 - Chr15_85884955-85885328.sub_0 NOTRANS 0.023 625 NO NO NO YES
hgchr22_45376444-45376154 - Chr15_86480418-86479742 TRANS 0.023 459 NO NO NO NO
hgchr22_47675523-47673910.sub_1 - Chr15_88297162-88296387.sub_0 NOTRANS 0.023 480 NO NO NO NO
hgchr22_48951267-48951500 - Chr15_89487880-89488175 NOTRANS 0.023 381 NO YES NO NO
hgchr22_48372210-48372885 - Chr15_88952346-88952589 TRANS 0.023 428 NO NO NO NO
hgchr22_19641948-19641634 - Chr16_17264897-17264794 NOTRANS 0.023 295 NO NO NO YES
hgchr22_16596858-16597479 - Chr6_121296757-121297234 TRANS 0.023 424 NO YES NO NO
hgchr22_48021718-48021940 - Chr15_88632557-88633856 NOTRANS 0.024 457 NO NO NO NO
hgchr22_45202344-45202101 - Chr15_86353370-86353057 TRANS 0.024 300 NO NO NO NO
hgchr22_48248788-48248668 - Chr15_88864158-88864020 NOTRANS 0.025 232 YES NO NO NO
hgchr22_49071750-49071176 - Chr15_89604208-89604020 NOTRANS 0.025 377 NO YES NO YES
hgchr22_34164390-34164035.sub_0 - Chr8_74215463-74214537.sub_0 NOTRANS 0.025 326 NO NO NO NO
hgchr22_36627567-36627342 - Chr15_79436701-79436353 TRANS 0.025 390 YES NO NO YES
hgchr22_41078225-41078420 - Chr15_83336227-83336408 NOTRANS 0.025 369 NO NO NO NO
hgchr22_42708910-42709867.sub_0 - Chr15_84565191-84566072.sub_0 NOTRANS 0.025 419 YES YES NO YES
hgchr22_46776394-46777678 - Chr15_87560454-87561003 NOTRANS 0.025 399 NO NO NO NO
hgchr22_44236110-44236305.sub_0 - Chr15_85578152-85579039.sub_1 NOTRANS 0.025 414 NO NO NO YES
hgchr22_45882687-45883368 - Chr15_86851564-86853108 TRANS 0.026 495 NO NO NO NO
hgchr22_45409930-45411371 - Chr15_86505729-86506020 TRANS 0.027 421 NO YES NO NO
hgchr22_42540562-42541036 - Chr15_84427031-84427265 TRANS 0.027 296 NO NO NO YES
hgchr22_43909243-43910469 - Chr15_85301567-85302172 TRANS 0.028 346 YES YES YES NO
hgchr22_45378345-45378065 - Chr15_86482856-86482136 TRANS 0.028 329 NO NO NO YES
hgchr22_48625942-48625126.sub_0 - Chr15_89204230-89203924.sub_0 NOTRANS 0.028 369 NO NO NO NO
hgchr22_45225109-45224897 - Chr15_86370087-86369541 TRANS 0.028 430 NO NO NO YES
hgchr22_43002245-43003769 - Chr15_84759239-84760057 TRANS 0.028 672 NO NO NO NO
hgchr22_44812387-44813432 - Chr15_86047422-86048395 TRANS 0.028 493 NO YES NO NO
hgchr22_17469587-17468189.sub_1 - Chr16_17655369-17655058.sub_0 TRANS 0.029 433 NO NO NO NO
hgchr22_45306315-45307193 - Chr15_86429272-86429655 TRANS 0.029 456 NO NO NO NO
hgchr22_42655128-42655358 - Chr15_84531995-84532391 NOTRANS 0.029 287 NO NO NO NO
hgchr22_47227716-47228300 - Chr15_87947901-87948334 TRANS 0.029 362 NO NO NO NO
hgchr22_17287085-17286586 - Chr16_17857809-17857505 TRANS 0.029 424 NO NO NO NO
hgchr22_49462805-49463443 - Chr15_89954140-89954749 NOTRANS 0.029 423 NO NO NO NO
hgchr22_48636798-48637005 - Chr15_89211050-89211285 NOTRANS 0.029 352 YES NO NO NO
hgchr22_44659866-44660076 - Chr15_85909350-85909554 NOTRANS 0.029 303 NO NO NO YES
hgchr22_48535133-48535803 - Chr15_89115144-89115386 TRANS 0.03 293 NO NO NO NO
hgchr22_44609517-44609908 - Chr15_85869263-85869645 NOTRANS 0.03 500 NO NO NO YES
hgchr22_41891883-41892294 - Chr15_83935251-83935647 TRANS 0.03 522 NO NO NO NO
hgchr22_49452625-49452999 - Chr15_89944182-89944392 TRANS 0.03 283 YES NO NO YES
hgchr22_38399595-38398845 - Chr15_80719725-80719400 TRANS 0.03 432 NO NO NO NO
hgchr22_43940950-43941228 - Chr15_85328353-85328796 NOTRANS 0.03 380 YES NO NO NO

chrX


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 40 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchrX_83432279-83431585 - ChrX_102959819-102959650 TRANS 0.001 363 NO NO NO NO
hgchrX_39582405-39581875 - ChrX_10286742-10286600 TRANS 0.001 471 NO NO NO NO
hgchrX_109857983-109858943 - ChrX_133300499-133300721 NOTRANS 0.002 443 NO NO NO NO
hgchrX_148338470-148339631 - ChrX_61962095-61962530 TRANS 0.002 398 NO NO NO NO
hgchrX_149612637-149611936 - ChrX_62992792-62992507 TRANS 0.003 450 YES NO NO NO
hgchrX_152525127-152525372 - ChrX_65290881-65291294 TRANS 0.003 494 NO YES NO YES
hgchrX_39995607-39996025 - ChrX_10686566-10687530 TRANS 0.003 497 NO NO NO NO
hgchrX_148891991-148892367 - ChrX_62295834-62296375 NOTRANS 0.003 563 NO NO NO NO
hgchrX_148326392-148325302.sub_0 - ChrX_61948011-61947400.sub_0 TRANS 0.003 435 YES NO NO YES
hgchrX_113155112-113154929 - ChrX_136486455-136485633 NOTRANS 0.004 330 NO NO NO NO
hgchrX_138882634-138882865 - ChrX_52088014-52088308 NOTRANS 0.004 348 NO NO NO NO
hgchrX_147932734-147933168 - ChrX_61594436-61594678 NOTRANS 0.005 338 NO NO NO NO
hgchrX_148767117-148765781.sub_0 - ChrX_62110666-62110005.sub_0 NOTRANS 0.005 398 NO NO NO NO
hgchrX_127269608-127270053 - ChrX_38933990-38934131 NOTRANS 0.005 442 NO NO NO NO
hgchrX_100353594-100354709 - ChrX_124482913-124483956 TRANS 0.007 566 YES YES NO NO
hgchrX_144994355-144994775 - ChrX_58564647-58564865 NOTRANS 0.008 278 NO NO NO NO
hgchrX_161747-161306 - Chr5_107433967-107433543 NOTRANS 0.009 529 YES YES YES NO
hgchrX_39567090-39567450 - ChrX_10273644-10273843 NOTRANS 0.009 349 NO NO NO NO
hgchrX_148325302-148326392 - ChrX_61947400-61948011 NOTRANS 0.009 407 YES NO NO NO
hgchrX_152174104-152173683 - ChrX_64951703-64951206 NOTRANS 0.011 396 NO NO NO YES
hgchrX_118343661-118342981 - ChrX_29314222-29313976 TRANS 0.011 452 NO NO NO YES
hgchrX_135019905-135019425 - ChrX_48446481-48446137 NOTRANS 0.012 372 NO NO NO NO
hgchrX_39090542-39090097 - ChrX_9773147-9772939 NOTRANS 0.015 334 NO NO NO NO
hgchrX_130687261-130687040 - ChrX_42977961-42977701 NOTRANS 0.015 288 NO NO NO NO
hgchrX_146222399-146221678 - ChrX_59707542-59707272 NOTRANS 0.016 262 NO NO NO NO
hgchrX_152706081-152705830 - ChrX_65463585-65463357 NOTRANS 0.016 366 NO NO NO NO
hgchrX_39589007-39589320 - ChrX_10292401-10292591 NOTRANS 0.017 310 NO NO NO NO
hgchrX_133274793-133275079 - ChrX_45467056-45467237 NOTRANS 0.017 223 NO NO NO NO
hgchrX_121735722-121734568.sub_0 - ChrX_33423098-33422531.sub_0 NOTRANS 0.018 287 NO NO NO NO
hgchrX_70370183-70369434 - ChrX_92936886-92936645 TRANS 0.018 330 YES NO NO NO
hgchrX_152285291-152283620.sub_0 - ChrX_65044515-65044316.sub_0 TRANS 0.02 524 NO NO YES YES
hgchrX_38790834-38791253 - ChrX_9446006-9446207 TRANS 0.021 353 NO NO NO NO
hgchrX_37807399-37807651 - ChrX_8420430-8420626 TRANS 0.023 178 NO NO NO NO
hgchrX_148373344-148373016.sub_0 - ChrX_63945087-63944057.sub_1 TRANS 0.024 394 NO NO NO YES
hgchrX_151833380-151833674 - ChrX_64598232-64598646 NOTRANS 0.024 332 NO YES NO YES
hgchrX_153146907-153147072 - ChrX_65827942-65828757 TRANS 0.025 396 YES NO NO NO
hgchrX_153151568-153151909 - ChrX_65831542-65831958 TRANS 0.027 347 YES YES YES NO
hgchrX_152385274-152384735 - ChrX_65142469-65142285 TRANS 0.028 413 YES NO NO NO
hgchrX_292336-293099 - ChrUnRandom_37428613-37429001 NOTRANS 0.028 504 NO NO NO NO
hgchrX_100456435-100456222 - ChrX_124594565-124594078 NOTRANS 0.029 325 YES YES YES NO

chrY


You can upload the results as a custom track and view it here in the UCSC Genome Browser

Here are links to fasta files containing the human and the mouse candidates.

There are 2 candidates
Candidate Transfrag Pscore Score EST A EST B Fantom More Organisms
hgchrY_161747-161306 - Chr5_107433967-107433543 NOTRANS 0.009 529 YES YES YES NO
hgchrY_292336-293099 - ChrUnRandom_37428613-37429001 NOTRANS 0.029 504 NO NO NO NO