Cow genome map
| Conread name: | Lng1-LNG010100E06 |
| Conread position: | 4-373 |
| Cow position: | chr10:50141336-50140952 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 144, 32 |
| Conread position: | 22-358 |
| Cow position: | chr10:18863068-18863420 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 55, 103 |
| Conread position: | 1-358 |
| Cow position: | chr11:18452956-18452593 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 212, 18 |
| Conread position: | 41-358 |
| Cow position: | chr11:17737542-17737876 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 36, 22 |
| Conread position: | 22-193 |
| Cow position: | chr12:10161772-10161604 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 25-358 |
| Cow position: | chr12:26310906-26310567 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 6, 12 |
| Conread position: | 49-363 |
| Cow position: | chr12:12709958-12709650 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 227, 34 |
| Conread position: | 49-373 |
| Cow position: | chr12:7936861-7936528 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 228 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 150, 23 |
| Conread position: | 4-204 |
| Cow position: | chr13:33239729-33239925 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 141, 7 |
| Conread position: | 18-274 |
| Cow position: | chr13:46464591-46464336 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 158, 41 |
| Conread position: | 22-190 |
| Cow position: | chr13:7804053-7803890 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 22-329 |
| Cow position: | chr13:20656558-20656882 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 178, 42 |
| Conread position: | 22-358 |
| Cow position: | chr14:15011655-15012011 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 165, 42 |
| Conread position: | 35-355 |
| Cow position: | chr14:35605507-35605845 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 165, 23 |
| Conread position: | 1-358 |
| Cow position: | chr15:23265657-23266019 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 239 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 3-358 |
| Cow position: | chr15:31855343-31855718 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 194, 33 |
| Conread position: | 25-344 |
| Cow position: | chr15:1887969-1888302 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 163, 37 |
| Conread position: | 39-193 |
| Cow position: | chr15:41344152-41344005 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 70-358 |
| Cow position: | chr15:19813563-19813256 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 135, 16 |
| Conread position: | 3-155 |
| Cow position: | chr16:12473523-12473671 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 26-204 |
| Cow position: | chr17:32451399-32451224 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 22-363 |
| Cow position: | chr18:50880673-50881034 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 244 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 181, 42 |
| Conread position: | 25-174 |
| Cow position: | chr18:16259454-16259600 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 109 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 41-362 |
| Cow position: | chr18:1700797-1701128 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 39, 17 |
| Conread position: | 65-254 |
| Cow position: | chr18:19152613-19152796 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 1-205 |
| Cow position: | chr19:30188596-30188397 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 3-272 |
| Cow position: | chr19:49483946-49484219 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 197 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 97, 20 |
| Conread position: | 22-274 |
| Cow position: | chr19:51070667-51070414 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 137, 42 |
| Conread position: | 55-358 |
| Cow position: | chr19:25846559-25846872 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 7 |
| Conread position: | 26-204 |
| Cow position: | chr20:26993043-26993219 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 10-359 |
| Cow position: | chr21:6667473-6667830 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 240 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 23, 13 |
| Conread position: | 39-194 |
| Cow position: | chr21:8273234-8273084 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 22-354 |
| Cow position: | chr23:24400966-24400607 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 244 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 56, 14 |
| Conread position: | 26-354 |
| Cow position: | chr23:9546613-9546955 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 54, 165 |
| Conread position: | 12-358 |
| Cow position: | chr24:35835831-35835483 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 46 |
| Conread position: | 49-205 |
| Cow position: | chr24:36097693-36097847 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 65-359 |
| Cow position: | chr25:11526754-11526462 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 213, 15 |
| Conread position: | 67-357 |
| Cow position: | chr25:20457525-20457239 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 92, 53 |
| Conread position: | 87-358 |
| Cow position: | chr25:5377358-5377075 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 113, 163 |
| Conread position: | 22-161 |
| Cow position: | chr27:11935434-11935302 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 25-358 |
| Cow position: | chr28:22360874-22361207 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 201, 52 |
| Conread position: | 36-354 |
| Cow position: | chr28:26626925-26626611 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 164, 37 |
| Conread position: | 22-258 |
| Cow position: | chr29:22454602-22454365 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 171, 33 |
| Conread position: | 5-579 |
| Cow position: | chr6:10484985-10484397 (view UCSC Genome Browser custom track) |
| Alignm length: | 612 |
| Alignm identity: | 446 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 6 |
| Conread position: | 22-193 |
| Cow position: | chr7:5701181-5701349 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 26-357 |
| Cow position: | chr7:5448037-5447708 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 223, 38 |
| Conread position: | 26-373 |
| Cow position: | chr7:5435619-5435274 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 216, 38 |
| Conread position: | 45-192 |
| Cow position: | chr7:33062483-33062342 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 1-279 |
| Cow position: | chr8:18810638-18810923 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 201 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 197, 12 |
| Conread position: | 3-155 |
| Cow position: | chr8:9985943-9986090 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 59, 13 |
| Conread position: | 18-358 |
| Cow position: | chr8:47128794-47129151 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 240 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 185, 54 |
| Conread position: | 19-193 |
| Cow position: | chr8:23440877-23440709 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 22-205 |
| Cow position: | chr8:40273414-40273233 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 118, 37 |
| Conread position: | 22-274 |
| Cow position: | chr8:5874380-5874631 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 173, 35 |
| Conread position: | 36-373 |
| Cow position: | chr8:33818990-33818639 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 164, 31 |
| Conread position: | 22-357 |
| Cow position: | chr9:10003861-10003504 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 248 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 22-391 |
| Cow position: | chr9:18570580-18570971 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 35-358 |
| Cow position: | chr9:47200429-47200758 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 230 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 154, 28 |
| Conread position: | 22-238 |
| Cow position: | chrX:8558208-8557992 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 181, 35 |
| Conread position: | 22-358 |
| Cow position: | chrX:4625155-4625516 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 158, 36 |
| Conread position: | 22-363 |
| Cow position: | chrX:18700111-18699752 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 26-358 |
| Cow position: | chrX:25453436-25453775 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 230, 33 |