Cow genome map

Conread name: LyN1-MLN01D100072

Conread position: 13-383
Cow position: chr1:69767999-69768383 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 248
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 82, 313

Conread position: 14-383
Cow position: chr1:55778010-55778390 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 249
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 76, 9

Conread position: 24-383
Cow position: chr1:17035163-17034791 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 241
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 69, 46

Conread position: 30-378
Cow position: chr1:69416845-69416496 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 220
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 158

Conread position: 30-378
Cow position: chr1:76620039-76619680 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 229
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 96, 62

Conread position: 30-383
Cow position: chr1:12060770-12060403 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr1:17011299-17010934 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr1:20830331-20830698 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 61, 341

Conread position: 30-383
Cow position: chr1:29363731-29364099 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr1:40056540-40056908 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 246
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr1:50210406-50210038 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr1:63604335-63603967 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr1:65387752-65388116 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 103, 70

Conread position: 30-383
Cow position: chr1:68606112-68605738 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 238
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr1:69404440-69404804 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 62

Conread position: 30-383
Cow position: chr1:81288571-81288939 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 238
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 66, 205

Conread position: 30-383
Cow position: chr1:82477412-82477780 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr1:82565549-82565917 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr1:93855950-93856316 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 30-390
Cow position: chr1:26584536-26584910 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 65, 231

Conread position: 30-391
Cow position: chr1:10724017-10724393 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 248
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 0

Conread position: 30-391
Cow position: chr1:30533584-30533207 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 103, 70

Conread position: 30-391
Cow position: chr1:42737869-42738241 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 244
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 66

Conread position: 30-391
Cow position: chr1:57364907-57364528 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 13, 21

Conread position: 30-391
Cow position: chr1:76750537-76750157 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 252
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 30-391
Cow position: chr1:85793117-85793496 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 30-391
Cow position: chr1:91891683-91891306 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 251
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 58, 260

Conread position: 30-393
Cow position: chr1:83975727-83976096 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 241
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 31

Conread position: 30-399
Cow position: chr1:64481185-64480818 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 249
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 99, 20

Conread position: 30-400
Cow position: chr1:80357738-80357346 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 249
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 34-383
Cow position: chr1:59207639-59207275 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 0

Conread position: 34-383
Cow position: chr1:72984914-72985253 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 16

Conread position: 34-383
Cow position: chr1:79455513-79455151 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 54, 320

Conread position: 34-383
Cow position: chr1:86546697-86546333 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 232
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 34-391
Cow position: chr1:49972729-49972358 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 99, 59

Conread position: 34-454
Cow position: chr1:30223122-30223548 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 288
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 59, 12

Conread position: 35-330
Cow position: chr1:40231746-40231444 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 209
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 49

Conread position: 35-392
Cow position: chr1:55320631-55320277 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 228
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 53, 185

Conread position: 36-392
Cow position: chr1:34507867-34508222 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 67, 95

Conread position: 36-461
Cow position: chr1:73197588-73197168 (view UCSC Genome Browser custom track)
Alignm length: 437
Alignm identity: 275
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 77

Conread position: 40-316
Cow position: chr1:89733061-89732784 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 179
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 136, 52

Conread position: 40-383
Cow position: chr1:13581543-13581192 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 162

Conread position: 40-388
Cow position: chr1:51084473-51084109 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 48, 221

Conread position: 40-391
Cow position: chr1:85779004-85778636 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 231
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 40-486
Cow position: chr1:46837073-46837529 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 289
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 58, 409

Conread position: 42-383
Cow position: chr1:94661122-94661473 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 227
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 51, 8

Conread position: 42-393
Cow position: chr1:53563459-53563808 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 85, 48

Conread position: 49-383
Cow position: chr1:57135874-57136210 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 92, 51

Conread position: 54-333
Cow position: chr1:23262796-23262514 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 188
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 39

Conread position: 54-381
Cow position: chr1:99315682-99316009 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 219
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 36, 57

Conread position: 54-383
Cow position: chr1:48248372-48248707 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 225
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 25, 170

Conread position: 54-383
Cow position: chr1:50941825-50941492 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 229
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 35, 17

Conread position: 54-383
Cow position: chr1:82922698-82922360 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 80, 41

Conread position: 54-391
Cow position: chr1:72082224-72082571 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 222
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 59, 75

Conread position: 54-392
Cow position: chr1:91597251-91596899 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 44, 181

Conread position: 54-397
Cow position: chr1:71740681-71740325 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 248
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 74, 46

Conread position: 54-420
Cow position: chr1:71443065-71443408 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 212, 44

Conread position: 55-379
Cow position: chr1:99219071-99218744 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 220
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 62

Conread position: 55-391
Cow position: chr1:91900482-91900837 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 229
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 40, 0

Conread position: 63-333
Cow position: chr1:87849157-87849425 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 191
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 74, 34

Conread position: 63-383
Cow position: chr1:22725026-22724709 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 207
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 195, 45

Conread position: 70-390
Cow position: chr1:18964893-18964554 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 219
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 88-433
Cow position: chr1:53518579-53518927 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 227
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 49, 64

Conread position: 148-393
Cow position: chr1:42259549-42259299 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 176
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 11, 160

Conread position: 166-383
Cow position: chr1:62921145-62921363 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 100, 0

Conread position: 171-393
Cow position: chr1:20789017-20789240 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 89, 145

Conread position: 171-393
Cow position: chr1:85824078-85824303 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 154

Conread position: 171-399
Cow position: chr1:29607473-29607245 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 215

Conread position: 171-426
Cow position: chr1:95164951-95164696 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 165
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 95, 196

Conread position: 172-389
Cow position: chr1:44256247-44256459 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 64, 49

Conread position: 172-396
Cow position: chr1:58115718-58115496 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 108

Conread position: 173-392
Cow position: chr1:6769099-6769319 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 86, 173

Conread position: 176-383
Cow position: chr1:82911233-82911025 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 64, 55

Conread position: 181-393
Cow position: chr1:57696351-57696138 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 79, 32

Conread position: 183-383
Cow position: chr1:101012581-101012380 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 138
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 77, 164

Conread position: 204-429
Cow position: chr1:72093264-72093041 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 8, 108

Conread position: 435-575
Cow position: chr1:27311205-27311063 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 58, 119

Conread position: 1-383
Cow position: chr10:38450968-38451355 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 88

Conread position: 16-309
Cow position: chr10:45311091-45310792 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 201
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 75, 30

Conread position: 30-333
Cow position: chr10:20537826-20538126 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 212
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 69, 93

Conread position: 30-382
Cow position: chr10:8291505-8291865 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 273

Conread position: 30-383
Cow position: chr10:7897024-7896655 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr10:14334376-14334020 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 223
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 58, 100

Conread position: 30-383
Cow position: chr10:21488416-21488782 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 69, 92

Conread position: 30-383
Cow position: chr10:22102696-22103058 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 234
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 96, 28

Conread position: 30-383
Cow position: chr10:25651971-25651603 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr10:30684034-30683665 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 62, 206

Conread position: 30-383
Cow position: chr10:33870743-33871111 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr10:37771343-37771710 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr10:38343899-38343540 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 129, 67

Conread position: 30-383
Cow position: chr10:39439610-39439978 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 233
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 58, 215

Conread position: 30-383
Cow position: chr10:39814940-39814573 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 231

Conread position: 30-383
Cow position: chr10:57988536-57988169 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 103, 0

Conread position: 30-383
Cow position: chr10:62407319-62406956 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 96, 63

Conread position: 30-387
Cow position: chr10:44708153-44707787 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 63, 245

Conread position: 30-390
Cow position: chr10:39877960-39877591 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 239
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 336

Conread position: 30-393
Cow position: chr10:46192604-46192981 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 242
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 96, 58

Conread position: 30-393
Cow position: chr10:64220969-64220614 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 241
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 230, 40

Conread position: 31-383
Cow position: chr10:39778662-39778306 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 225
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 57, 45

Conread position: 34-383
Cow position: chr10:29845190-29844832 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 237
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 38, 60

Conread position: 35-311
Cow position: chr10:7477855-7477575 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 192
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 93, 52

Conread position: 35-386
Cow position: chr10:41387509-41387156 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 93, 46

Conread position: 35-392
Cow position: chr10:41717236-41717600 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 75, 277

Conread position: 36-387
Cow position: chr10:19721628-19721271 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 239
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 13, 46

Conread position: 37-383
Cow position: chr10:29011203-29010844 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 239
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 52, 267

Conread position: 40-355
Cow position: chr10:44102602-44102929 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 225
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 53, 197

Conread position: 42-383
Cow position: chr10:46183921-46184271 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 230
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 13, 50

Conread position: 42-393
Cow position: chr10:29722582-29722215 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 86, 296

Conread position: 54-338
Cow position: chr10:10242413-10242713 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 203
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 54-383
Cow position: chr10:39039816-39039490 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 222
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 79, 39

Conread position: 56-392
Cow position: chr10:22677440-22677770 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 232
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 34, 45

Conread position: 59-383
Cow position: chr10:8325615-8325287 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 209
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 40, 85

Conread position: 60-383
Cow position: chr10:41158901-41159239 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 73-366
Cow position: chr10:60768580-60768870 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 205
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 64, 98

Conread position: 87-383
Cow position: chr10:23409722-23409424 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 187
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 46, 0

Conread position: 140-363
Cow position: chr10:57089539-57089767 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 87

Conread position: 147-393
Cow position: chr10:2133642-2133395 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 177
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 20, 126

Conread position: 148-393
Cow position: chr10:40822815-40822568 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 163
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 138, 115

Conread position: 158-309
Cow position: chr10:28709901-28710053 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 166-316
Cow position: chr10:38865697-38865848 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 171-378
Cow position: chr10:13218410-13218205 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 89, 136

Conread position: 171-389
Cow position: chr10:40641561-40641777 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 175, 91

Conread position: 181-426
Cow position: chr10:58356900-58356659 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 82

Conread position: 184-383
Cow position: chr10:6535345-6535545 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 2-383
Cow position: chr11:43513554-43513163 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 248
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 87, 288

Conread position: 30-338
Cow position: chr11:10848550-10848871 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 213
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 30-377
Cow position: chr11:41169598-41169233 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 245
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 63, 202

Conread position: 30-383
Cow position: chr11:3494087-3494455 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr11:23249372-23249004 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 229
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 30-383
Cow position: chr11:23881129-23881487 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 233
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 63

Conread position: 30-383
Cow position: chr11:24394413-24394779 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 56, 85

Conread position: 30-383
Cow position: chr11:27668899-27668529 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 57, 0

Conread position: 30-383
Cow position: chr11:44517766-44517400 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr11:44582244-44581877 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr11:47738442-47738082 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr11:53430933-53430567 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 210

Conread position: 30-383
Cow position: chr11:58135492-58135854 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 58, 201

Conread position: 30-383
Cow position: chr11:67845472-67845106 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 63, 40

Conread position: 30-391
Cow position: chr11:32452926-32453308 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 246
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 30-392
Cow position: chr11:17106584-17106208 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 61, 351

Conread position: 30-392
Cow position: chr11:17547261-17547632 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 65

Conread position: 30-392
Cow position: chr11:63654236-63653856 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 248
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 66, 255

Conread position: 30-437
Cow position: chr11:15943266-15942864 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 110

Conread position: 31-383
Cow position: chr11:9733578-9733217 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 18, 9

Conread position: 34-341
Cow position: chr11:13524764-13524468 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 200
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 226, 38

Conread position: 34-383
Cow position: chr11:19101391-19101024 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 59, 80

Conread position: 34-389
Cow position: chr11:40581496-40581855 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 228
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 82, 47

Conread position: 34-389
Cow position: chr11:54254548-54254915 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 251
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 92, 147

Conread position: 34-391
Cow position: chr11:72309936-72309563 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 238
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 62, 0

Conread position: 34-393
Cow position: chr11:63163843-63163481 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 234
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 157, 42

Conread position: 34-421
Cow position: chr11:4191644-4192035 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 249
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 213

Conread position: 35-346
Cow position: chr11:9302333-9302009 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 225
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 27, 36

Conread position: 35-388
Cow position: chr11:10883398-10883757 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 91, 42

Conread position: 38-382
Cow position: chr11:13048659-13048303 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 25, 73

Conread position: 39-383
Cow position: chr11:28740205-28739843 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 248
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 15

Conread position: 40-313
Cow position: chr11:30208245-30208524 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 188
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 86, 48

Conread position: 40-386
Cow position: chr11:35264976-35265325 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 70, 201

Conread position: 40-389
Cow position: chr11:37285704-37286064 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 240
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 88, 193

Conread position: 40-392
Cow position: chr11:63275293-63274942 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 237
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 105, 53

Conread position: 40-393
Cow position: chr11:16484645-16484977 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 238
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 218, 53

Conread position: 46-392
Cow position: chr11:12387539-12387889 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 241
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 118, 20

Conread position: 53-392
Cow position: chr11:3104327-3103973 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 244
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 34, 62

Conread position: 54-383
Cow position: chr11:30253351-30253689 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 217
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 42, 59

Conread position: 55-391
Cow position: chr11:19062954-19062600 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 41, 0

Conread position: 56-383
Cow position: chr11:26784380-26784715 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 221
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 103, 72

Conread position: 74-390
Cow position: chr11:21475263-21475593 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 224
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 19, 67

Conread position: 84-392
Cow position: chr11:54467319-54467619 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 203
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 50

Conread position: 154-388
Cow position: chr11:73461903-73461668 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 171
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 11

Conread position: 158-383
Cow position: chr11:32079548-32079322 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 0

Conread position: 167-388
Cow position: chr11:64963303-64963524 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 16, 87

Conread position: 171-336
Cow position: chr11:35135227-35135386 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 171-338
Cow position: chr11:54483738-54483571 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 116
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 171-393
Cow position: chr11:36087487-36087266 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 144, 0

Conread position: 171-424
Cow position: chr11:20575023-20574772 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 166, 92

Conread position: 176-383
Cow position: chr11:86876626-86876418 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 50, 45

Conread position: 176-391
Cow position: chr11:61399847-61399628 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 181-413
Cow position: chr11:85652968-85653199 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 158
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 79, 124

Conread position: 185-383
Cow position: chr11:4062643-4062447 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 127

Conread position: 186-371
Cow position: chr11:24484472-24484657 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 96

Conread position: 187-388
Cow position: chr11:76577538-76577742 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 202

Conread position: 199-383
Cow position: chr11:47728411-47728226 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 126
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 11-383
Cow position: chr12:21428214-21427840 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 149
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 175, 244

Conread position: 18-383
Cow position: chr12:30677012-30677390 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 259
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 140, 11

Conread position: 30-382
Cow position: chr12:42858151-42857783 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 246
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 63, 203

Conread position: 30-383
Cow position: chr12:3362326-3362687 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 229
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 66, 213

Conread position: 30-383
Cow position: chr12:21429393-21429761 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 61, 0

Conread position: 30-393
Cow position: chr12:15078233-15078594 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 237
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 90, 181

Conread position: 30-393
Cow position: chr12:32654941-32655313 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 236
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 65, 80

Conread position: 34-383
Cow position: chr12:22204323-22203960 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 52, 296

Conread position: 34-383
Cow position: chr12:22568366-22568005 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 41, 303

Conread position: 34-383
Cow position: chr12:24994574-24994210 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 57, 234

Conread position: 35-383
Cow position: chr12:27854574-27854212 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 237
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 14, 0

Conread position: 40-383
Cow position: chr12:8138745-8138406 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 224
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 44, 54

Conread position: 40-383
Cow position: chr12:42606853-42606498 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 50, 69

Conread position: 54-383
Cow position: chr12:6405227-6404886 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 217
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 141

Conread position: 70-393
Cow position: chr12:24929068-24928738 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 213
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 165

Conread position: 74-429
Cow position: chr12:41465085-41464719 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 244
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 90, 16

Conread position: 79-424
Cow position: chr12:10679983-10679631 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 234
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 49, 8

Conread position: 166-378
Cow position: chr12:39038931-39038720 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 174-384
Cow position: chr12:8891413-8891205 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 16

Conread position: 175-383
Cow position: chr12:11193818-11194022 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 204, 88

Conread position: 175-383
Cow position: chr12:11205089-11205293 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 204, 88

Conread position: 176-383
Cow position: chr12:21253041-21252834 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 137, 194

Conread position: 176-384
Cow position: chr12:22519435-22519226 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 139
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 185-383
Cow position: chr12:3209523-3209722 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 134
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 235-392
Cow position: chr12:38345058-38344901 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 48

Conread position: 9-391
Cow position: chr13:14186143-14186541 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 263
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 9, 237

Conread position: 30-382
Cow position: chr13:14401941-14401576 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 105, 0

Conread position: 30-383
Cow position: chr13:5500833-5500466 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 56, 0

Conread position: 30-383
Cow position: chr13:21697429-21697797 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr13:31508075-31508439 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 106

Conread position: 30-383
Cow position: chr13:35758451-35758813 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 58, 28

Conread position: 30-383
Cow position: chr13:46527614-46527976 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 258
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 46, 203

Conread position: 30-390
Cow position: chr13:13326094-13326466 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 242
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 30-391
Cow position: chr13:34030772-34031140 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 90, 63

Conread position: 30-392
Cow position: chr13:43590489-43590853 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 238
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 70, 31

Conread position: 31-393
Cow position: chr13:44752134-44752505 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 253
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 87, 65

Conread position: 34-333
Cow position: chr13:14177680-14177372 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 207
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 102, 59

Conread position: 34-338
Cow position: chr13:34377689-34377391 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 201
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 176

Conread position: 34-383
Cow position: chr13:30276150-30275806 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 230
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 94, 137

Conread position: 34-383
Cow position: chr13:34041165-34040800 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 34-391
Cow position: chr13:37835150-37834782 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 243
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 94, 50

Conread position: 34-392
Cow position: chr13:61051869-61051510 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 139

Conread position: 35-379
Cow position: chr13:3534710-3534361 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 71, 11

Conread position: 35-396
Cow position: chr13:11071100-11070748 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 228
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 106, 11

Conread position: 40-383
Cow position: chr13:34343081-34343439 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 50, 0

Conread position: 40-383
Cow position: chr13:34938619-34938971 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 223
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 56, 21

Conread position: 40-387
Cow position: chr13:32179590-32179949 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 46, 8

Conread position: 40-391
Cow position: chr13:11739095-11739455 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 240
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 88, 26

Conread position: 42-383
Cow position: chr13:33524777-33524423 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 234
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 8

Conread position: 42-394
Cow position: chr13:16816271-16816625 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 39

Conread position: 44-383
Cow position: chr13:49494997-49494646 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 228
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 84, 43

Conread position: 48-383
Cow position: chr13:31729710-31729371 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 21, 153

Conread position: 54-383
Cow position: chr13:33335121-33334788 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 72, 39

Conread position: 54-383
Cow position: chr13:50193206-50192865 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 222
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 54-392
Cow position: chr13:4193501-4193167 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 41

Conread position: 54-392
Cow position: chr13:44652650-44652314 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 236
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 83, 39

Conread position: 55-392
Cow position: chr13:21839008-21838665 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 214
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 41, 59

Conread position: 75-383
Cow position: chr13:11388208-11388530 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 207
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 166-393
Cow position: chr13:11763318-11763090 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 186-393
Cow position: chr13:19128300-19128093 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 103

Conread position: 187-383
Cow position: chr13:1048680-1048489 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 138
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 73, 34

Conread position: 209-383
Cow position: chr13:3760271-3760096 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 1-393
Cow position: chr14:5074969-5075360 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 262
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 96, 16

Conread position: 24-383
Cow position: chr14:48253280-48252919 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 102, 79

Conread position: 29-313
Cow position: chr14:33605879-33605578 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 207
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 30-333
Cow position: chr14:12124142-12123824 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 207
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 60, 238

Conread position: 30-338
Cow position: chr14:16272255-16271953 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 58, 141

Conread position: 30-366
Cow position: chr14:17965364-17965696 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 225
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 132, 70

Conread position: 30-383
Cow position: chr14:2287307-2287673 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 232
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 30-383
Cow position: chr14:5530098-5530466 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr14:15274798-15274433 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 63, 295

Conread position: 30-383
Cow position: chr14:27978396-27978764 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr14:45670995-45670623 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr14:45710688-45710330 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 221
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 58, 191

Conread position: 30-388
Cow position: chr14:13834180-13834553 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 247
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 63, 170

Conread position: 30-391
Cow position: chr14:751607-751984 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 244
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 74, 291

Conread position: 30-391
Cow position: chr14:13863056-13862683 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 241
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 65, 213

Conread position: 30-391
Cow position: chr14:20783508-20783886 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 30-391
Cow position: chr14:32448003-32448373 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 235
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 78, 93

Conread position: 34-383
Cow position: chr14:19327218-19326854 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 237
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 34-383
Cow position: chr14:35930641-35930994 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 125, 65

Conread position: 40-339
Cow position: chr14:47939922-47939614 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 201
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 114

Conread position: 40-393
Cow position: chr14:28123956-28123602 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 243
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 88

Conread position: 40-394
Cow position: chr14:18105478-18105840 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 57

Conread position: 40-394
Cow position: chr14:19056502-19056155 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 87, 20

Conread position: 40-411
Cow position: chr14:11610283-11609908 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 236
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 97, 61

Conread position: 54-307
Cow position: chr14:12340587-12340329 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 26

Conread position: 63-395
Cow position: chr14:34066936-34067262 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 219
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 30

Conread position: 70-383
Cow position: chr14:35372127-35371815 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 221
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 58, 17

Conread position: 158-392
Cow position: chr14:45027819-45027585 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 155
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 108, 83

Conread position: 169-383
Cow position: chr14:33490031-33490245 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 143, 23

Conread position: 173-393
Cow position: chr14:42122380-42122161 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 87, 139

Conread position: 176-383
Cow position: chr14:33392725-33392516 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 50, 45

Conread position: 176-391
Cow position: chr14:30583200-30582981 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 183-396
Cow position: chr14:35425325-35425537 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 77, 133

Conread position: 185-392
Cow position: chr14:20911126-20911329 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 148
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 75, 48

Conread position: 202-375
Cow position: chr14:42311871-42312047 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 125
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 0

Conread position: 18-383
Cow position: chr15:31359897-31360270 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 243
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 142, 75

Conread position: 29-393
Cow position: chr15:3777640-3777273 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 235
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 85, 187

Conread position: 30-338
Cow position: chr15:2013597-2013922 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 214
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 30-382
Cow position: chr15:33122416-33122783 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 239
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr15:107039-107407 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr15:4197505-4197873 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 61, 293

Conread position: 30-383
Cow position: chr15:4672472-4672839 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 233
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 208

Conread position: 30-383
Cow position: chr15:4962671-4963019 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 219
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 109

Conread position: 30-383
Cow position: chr15:6561625-6561993 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 243
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 20, 15

Conread position: 30-383
Cow position: chr15:19737017-19736649 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr15:20411636-20412002 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 234
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 30-383
Cow position: chr15:25205966-25205600 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 61, 106

Conread position: 30-383
Cow position: chr15:35898738-35898370 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr15:41659206-41659574 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr15:51218762-51219130 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 63

Conread position: 30-388
Cow position: chr15:45790948-45791314 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 110

Conread position: 30-389
Cow position: chr15:38651231-38651607 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 250
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 37, 278

Conread position: 30-391
Cow position: chr15:17036618-17036240 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 241
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 56, 90

Conread position: 30-403
Cow position: chr15:13075046-13075421 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 96, 241

Conread position: 30-404
Cow position: chr15:1833601-1833209 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 258
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 7, 206

Conread position: 34-267
Cow position: chr15:29866677-29866430 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 34-383
Cow position: chr15:4923188-4923551 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 57, 0

Conread position: 34-383
Cow position: chr15:24296133-24296493 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 238
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 49, 192

Conread position: 34-424
Cow position: chr15:24169185-24168782 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 271
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 94, 41

Conread position: 40-381
Cow position: chr15:2926361-2926695 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 92, 62

Conread position: 40-383
Cow position: chr15:1318473-1318823 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 241
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 127, 88

Conread position: 40-383
Cow position: chr15:2646601-2646247 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 40-383
Cow position: chr15:4726250-4726608 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 53, 102

Conread position: 40-387
Cow position: chr15:29333744-29333388 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 228
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 69

Conread position: 40-392
Cow position: chr15:6383103-6382746 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 234
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 64, 41

Conread position: 40-392
Cow position: chr15:25106145-25105781 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 250
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 48, 20

Conread position: 40-408
Cow position: chr15:25319275-25318911 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 236
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 6

Conread position: 54-392
Cow position: chr15:6459961-6460301 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 69

Conread position: 55-375
Cow position: chr15:10862740-10862422 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 215
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 19, 129

Conread position: 55-380
Cow position: chr15:31846509-31846849 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 49, 140

Conread position: 73-366
Cow position: chr15:53313793-53314087 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 187
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 86, 67

Conread position: 76-392
Cow position: chr15:50869423-50869751 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 219
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 52, 67

Conread position: 86-383
Cow position: chr15:3890008-3890310 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 195
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 242

Conread position: 144-389
Cow position: chr15:25663873-25664114 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 197, 41

Conread position: 149-383
Cow position: chr15:51613309-51613543 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 156
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 111, 170

Conread position: 149-391
Cow position: chr15:13390153-13389907 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 172
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 111, 0

Conread position: 154-426
Cow position: chr15:21915176-21915453 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 13, 217

Conread position: 158-333
Cow position: chr15:35272295-35272471 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 68, 60

Conread position: 165-393
Cow position: chr15:33494840-33495070 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 19

Conread position: 177-389
Cow position: chr15:4081036-4080823 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 184-383
Cow position: chr15:4686935-4687136 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 51, 33

Conread position: 185-382
Cow position: chr15:1783538-1783736 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 13-383
Cow position: chr16:41753939-41753549 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 256
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 21

Conread position: 19-383
Cow position: chr16:2726528-2726151 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 246
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 69, 0

Conread position: 30-328
Cow position: chr16:39824621-39824930 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 202
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 215

Conread position: 30-334
Cow position: chr16:10568344-10568645 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 207
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 29, 64

Conread position: 30-382
Cow position: chr16:3330635-3330993 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 233
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 129, 65

Conread position: 30-382
Cow position: chr16:19778953-19778589 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 235
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr16:838014-838376 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 230
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 254

Conread position: 30-383
Cow position: chr16:5485425-5485787 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 234
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 63, 100

Conread position: 30-383
Cow position: chr16:10374900-10374539 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 238
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 58, 257

Conread position: 30-383
Cow position: chr16:25456781-25456417 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 237
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 21

Conread position: 30-383
Cow position: chr16:27594203-27594571 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 61, 201

Conread position: 30-383
Cow position: chr16:27732686-27732318 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr16:29047721-29048086 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 130, 0

Conread position: 30-383
Cow position: chr16:34530996-34531351 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 103, 0

Conread position: 30-383
Cow position: chr16:40295464-40295103 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 233
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 56, 231

Conread position: 30-388
Cow position: chr16:32883409-32883042 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 239
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 98, 57

Conread position: 30-391
Cow position: chr16:15185774-15186153 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 247
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 301

Conread position: 34-382
Cow position: chr16:46500899-46501263 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 251
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 69, 59

Conread position: 34-383
Cow position: chr16:2410234-2409870 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 171

Conread position: 34-383
Cow position: chr16:7675749-7675394 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 232
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 125, 64

Conread position: 34-389
Cow position: chr16:32930818-32931161 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 231
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 59, 141

Conread position: 34-393
Cow position: chr16:27299444-27299076 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 238
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 66, 46

Conread position: 35-383
Cow position: chr16:1959914-1959562 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 223
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 52, 295

Conread position: 40-380
Cow position: chr16:707556-707202 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 236
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 30, 35

Conread position: 40-383
Cow position: chr16:2238058-2237707 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 225
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 56, 103

Conread position: 40-383
Cow position: chr16:5527679-5527322 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 227
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 64, 244

Conread position: 42-383
Cow position: chr16:1566743-1566400 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 217
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 46, 8

Conread position: 43-379
Cow position: chr16:15047750-15047427 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 222
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 78, 41

Conread position: 48-331
Cow position: chr16:32773837-32773552 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 192
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 43, 13

Conread position: 48-331
Cow position: chr16:42175595-42175882 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 42, 160

Conread position: 53-375
Cow position: chr16:337908-338241 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 213
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 95

Conread position: 54-381
Cow position: chr16:14665093-14664751 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 39, 0

Conread position: 54-382
Cow position: chr16:23535174-23534838 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 220
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 43

Conread position: 54-383
Cow position: chr16:8815385-8815044 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 220
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 134

Conread position: 54-383
Cow position: chr16:49221184-49220854 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 217
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 34, 95

Conread position: 54-389
Cow position: chr16:42240447-42240786 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 221
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 103, 33

Conread position: 61-383
Cow position: chr16:12668051-12667715 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 214
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 84-316
Cow position: chr16:39366116-39365879 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 44, 191

Conread position: 148-388
Cow position: chr16:24764731-24764487 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 169
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 92

Conread position: 153-382
Cow position: chr16:40654733-40654960 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 111, 0

Conread position: 165-383
Cow position: chr16:43846369-43846153 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 95, 19

Conread position: 166-336
Cow position: chr16:46628829-46629001 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 94, 0

Conread position: 166-383
Cow position: chr16:5119173-5118955 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 145
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 84, 88

Conread position: 166-393
Cow position: chr16:27823402-27823177 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 90, 107

Conread position: 168-383
Cow position: chr16:7465452-7465668 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 141

Conread position: 169-393
Cow position: chr16:8665236-8665011 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 18, 119

Conread position: 171-383
Cow position: chr16:3828489-3828277 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 142
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 185, 98

Conread position: 171-396
Cow position: chr16:42869764-42869541 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 67, 30

Conread position: 173-336
Cow position: chr16:25938378-25938541 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-383
Cow position: chr16:20193316-20193108 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 179-393
Cow position: chr16:42060115-42059898 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 48

Conread position: 29-387
Cow position: chr17:44926063-44925698 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 32

Conread position: 30-261
Cow position: chr17:37214-37447 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 158
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 100

Conread position: 30-383
Cow position: chr17:182846-183209 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 103, 69

Conread position: 30-383
Cow position: chr17:2263411-2263777 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 107, 291

Conread position: 30-383
Cow position: chr17:6261131-6261497 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 59, 0

Conread position: 30-383
Cow position: chr17:13967197-13967564 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 215

Conread position: 30-383
Cow position: chr17:34157392-34157759 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 66, 346

Conread position: 30-383
Cow position: chr17:39049485-39049855 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 241
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr17:43989774-43990140 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 38, 28

Conread position: 34-383
Cow position: chr17:11086449-11086089 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 99, 59

Conread position: 34-383
Cow position: chr17:31094508-31094152 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 246
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 54, 34

Conread position: 34-383
Cow position: chr17:38946635-38946990 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 245
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 50, 112

Conread position: 36-363
Cow position: chr17:28874191-28873864 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 92, 57

Conread position: 40-383
Cow position: chr17:15326559-15326919 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 234
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 53, 315

Conread position: 40-383
Cow position: chr17:23323168-23322810 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 239
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 53, 191

Conread position: 41-313
Cow position: chr17:39453380-39453664 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 188
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 47, 5

Conread position: 42-426
Cow position: chr17:36001768-36001370 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 271
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 43, 172

Conread position: 48-391
Cow position: chr17:14936682-14936325 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 43, 57

Conread position: 54-375
Cow position: chr17:3654995-3654659 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 219
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 54-383
Cow position: chr17:19267537-19267207 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 215
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 79, 38

Conread position: 54-391
Cow position: chr17:27793487-27793134 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 228
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 42, 0

Conread position: 56-381
Cow position: chr17:1538444-1538119 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 213
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 41

Conread position: 73-338
Cow position: chr17:14269636-14269362 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 37

Conread position: 82-389
Cow position: chr17:6626635-6626946 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 205
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 78, 46

Conread position: 94-393
Cow position: chr17:3326467-3326776 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 212
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 61

Conread position: 163-431
Cow position: chr17:15685824-15686095 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 180
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 91

Conread position: 165-389
Cow position: chr17:18191498-18191717 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 93, 32

Conread position: 166-383
Cow position: chr17:39860-40078 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 166-383
Cow position: chr17:14295139-14294916 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 41, 186

Conread position: 166-392
Cow position: chr17:24335980-24336200 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 46

Conread position: 173-383
Cow position: chr17:41337350-41337152 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 176-382
Cow position: chr17:4346149-4345942 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 140
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 176-391
Cow position: chr17:19980706-19980490 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 176-392
Cow position: chr17:17257260-17257043 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 84, 0

Conread position: 185-392
Cow position: chr17:6121224-6121433 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 75, 0

Conread position: 208-392
Cow position: chr17:11784329-11784514 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 129
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 1-391
Cow position: chr18:24617586-24617990 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 258
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 16

Conread position: 10-383
Cow position: chr18:54170044-54169677 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 241
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 78, 17

Conread position: 13-272
Cow position: chr18:24574489-24574244 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 176
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 30-261
Cow position: chr18:38342814-38342581 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 166
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 66

Conread position: 30-383
Cow position: chr18:23799128-23799490 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 230
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 58, 157

Conread position: 30-383
Cow position: chr18:29238374-29238732 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 229
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 95, 63

Conread position: 30-383
Cow position: chr18:29865131-29864765 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 63, 45

Conread position: 30-383
Cow position: chr18:33270397-33270745 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 209, 63

Conread position: 30-383
Cow position: chr18:36510095-36510463 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 19, 15

Conread position: 30-383
Cow position: chr18:47742984-47743337 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 230
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 65, 158

Conread position: 30-383
Cow position: chr18:51482337-51482700 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 233
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 103, 62

Conread position: 30-383
Cow position: chr18:54004694-54004330 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 233
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 149

Conread position: 30-388
Cow position: chr18:14421761-14422127 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 240
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 69

Conread position: 30-389
Cow position: chr18:26746832-26747202 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 253
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 65, 93

Conread position: 30-391
Cow position: chr18:5534489-5534863 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 245
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 179

Conread position: 30-391
Cow position: chr18:19353845-19354224 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 69, 201

Conread position: 30-421
Cow position: chr18:28972406-28972001 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 255
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 103, 203

Conread position: 34-347
Cow position: chr18:8100934-8100626 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 206
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 71, 93

Conread position: 34-383
Cow position: chr18:16175136-16174774 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 235
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 257

Conread position: 40-383
Cow position: chr18:12992586-12992923 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 42

Conread position: 40-383
Cow position: chr18:37507449-37507809 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 230
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 55, 0

Conread position: 40-388
Cow position: chr18:37559028-37559378 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 236
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 89, 57

Conread position: 41-394
Cow position: chr18:44049184-44049538 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 238
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 134, 46

Conread position: 43-309
Cow position: chr18:45184774-45185049 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 85, 255

Conread position: 54-383
Cow position: chr18:4947457-4947793 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 216
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 37, 171

Conread position: 55-383
Cow position: chr18:51343186-51343529 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 225
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 58-393
Cow position: chr18:159721-159390 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 223
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 70, 34

Conread position: 70-393
Cow position: chr18:46884135-46883810 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 220
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 80

Conread position: 145-384
Cow position: chr18:42516233-42516476 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 199

Conread position: 156-397
Cow position: chr18:41647343-41647104 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 110, 20

Conread position: 158-383
Cow position: chr18:11273237-11273012 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 102, 151

Conread position: 158-393
Cow position: chr18:48469560-48469322 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 102, 173

Conread position: 165-383
Cow position: chr18:24714562-24714342 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 154
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 140, 98

Conread position: 166-383
Cow position: chr18:40482625-40482842 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 74, 65

Conread position: 171-382
Cow position: chr18:12186322-12186532 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 89, 145

Conread position: 174-383
Cow position: chr18:26741320-26741115 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 86, 47

Conread position: 203-388
Cow position: chr18:38346690-38346876 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 35

Conread position: 30-383
Cow position: chr19:173741-174110 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr19:4387095-4387452 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 233
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 126, 0

Conread position: 30-383
Cow position: chr19:20106209-20106577 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 65, 201

Conread position: 30-383
Cow position: chr19:23400741-23400399 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 58

Conread position: 30-383
Cow position: chr19:33874898-33875262 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 240
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 103, 63

Conread position: 30-391
Cow position: chr19:5730338-5730705 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 96, 109

Conread position: 30-394
Cow position: chr19:48028083-48027733 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 28

Conread position: 34-303
Cow position: chr19:40794755-40794474 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 194
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 86, 0

Conread position: 34-304
Cow position: chr19:4301556-4301823 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 185
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 54, 111

Conread position: 34-383
Cow position: chr19:788884-789240 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 48, 43

Conread position: 34-383
Cow position: chr19:5900022-5899659 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 234
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 62, 292

Conread position: 34-383
Cow position: chr19:16319142-16318778 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 234
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 57, 0

Conread position: 34-393
Cow position: chr19:5678301-5677940 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 250
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 86, 15

Conread position: 35-391
Cow position: chr19:32139895-32139532 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 253
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 64, 235

Conread position: 40-391
Cow position: chr19:40850966-40850606 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 237
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 198

Conread position: 40-393
Cow position: chr19:5561356-5560998 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 239
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 62, 7

Conread position: 47-392
Cow position: chr19:23360112-23360466 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 234

Conread position: 53-383
Cow position: chr19:892130-891788 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 225
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 35, 253

Conread position: 54-365
Cow position: chr19:42347438-42347755 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 206
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 7

Conread position: 54-383
Cow position: chr19:39985281-39984945 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 238
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 63, 179

Conread position: 54-393
Cow position: chr19:35107282-35106933 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 237
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 34, 55

Conread position: 55-392
Cow position: chr19:2964646-2964998 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 231
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 40, 230

Conread position: 66-297
Cow position: chr19:44003604-44003842 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 31, 5

Conread position: 158-390
Cow position: chr19:40471076-40470841 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 113, 0

Conread position: 166-392
Cow position: chr19:30559820-30560045 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 154
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 94, 157

Conread position: 171-379
Cow position: chr19:29141712-29141919 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 69

Conread position: 171-393
Cow position: chr19:36148062-36148283 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 209, 91

Conread position: 187-383
Cow position: chr19:43146313-43146510 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 132
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 429-631
Cow position: chr19:48027750-48027555 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 164
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 66, 162

Conread position: 13-389
Cow position: chr2:42221335-42220954 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 262
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 19, 51

Conread position: 29-394
Cow position: chr2:64768267-64767893 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 258
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 114

Conread position: 30-312
Cow position: chr2:45967106-45966820 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 194
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 218

Conread position: 30-382
Cow position: chr2:6005919-6005556 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 236
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 66, 235

Conread position: 30-382
Cow position: chr2:41687694-41688060 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 243
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 66, 201

Conread position: 30-383
Cow position: chr2:281758-281392 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 242
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 58, 200

Conread position: 30-383
Cow position: chr2:8119470-8119836 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 244
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 62, 213

Conread position: 30-383
Cow position: chr2:9958147-9957779 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 66, 293

Conread position: 30-383
Cow position: chr2:13044786-13044414 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 47, 267

Conread position: 30-383
Cow position: chr2:19012289-19012649 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 222
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr2:24925495-24925859 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 63, 212

Conread position: 30-383
Cow position: chr2:24926344-24926708 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 241
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 63, 212

Conread position: 30-383
Cow position: chr2:26904830-26904479 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 236
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 61, 142

Conread position: 30-383
Cow position: chr2:32065111-32064744 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 69, 63

Conread position: 30-383
Cow position: chr2:80291837-80291469 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 62, 205

Conread position: 30-391
Cow position: chr2:12696541-12696164 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 242
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 0

Conread position: 30-391
Cow position: chr2:28794167-28794550 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 253
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 94, 63

Conread position: 30-391
Cow position: chr2:50078494-50078863 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 242
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 74

Conread position: 30-391
Cow position: chr2:50982214-50981843 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 244
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 103, 66

Conread position: 30-391
Cow position: chr2:65937306-65936923 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 251
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 58, 0

Conread position: 30-392
Cow position: chr2:85082012-85081649 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 107, 57

Conread position: 30-407
Cow position: chr2:49628703-49629076 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 216
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 68, 148

Conread position: 34-384
Cow position: chr2:32656575-32656929 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 231
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 34

Conread position: 34-387
Cow position: chr2:3832281-3831933 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 94, 26

Conread position: 34-393
Cow position: chr2:39690838-39691206 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 256
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 58, 291

Conread position: 34-393
Cow position: chr2:62056107-62056451 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 239
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 57, 109

Conread position: 35-324
Cow position: chr2:1867810-1867530 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 198
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 106, 23

Conread position: 35-383
Cow position: chr2:32458128-32457766 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 241
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 125, 67

Conread position: 36-389
Cow position: chr2:72187566-72187199 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 92, 65

Conread position: 40-286
Cow position: chr2:49624984-49624733 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 57, 78

Conread position: 40-379
Cow position: chr2:15446217-15445885 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 231
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 120, 53

Conread position: 40-383
Cow position: chr2:47526425-47526075 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 231
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 10

Conread position: 40-383
Cow position: chr2:72688545-72688901 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 228
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 53, 30

Conread position: 40-388
Cow position: chr2:63518910-63519262 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 249
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 88, 34

Conread position: 40-392
Cow position: chr2:11693415-11693775 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 59, 84

Conread position: 42-383
Cow position: chr2:52617416-52617769 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 49, 9

Conread position: 42-393
Cow position: chr2:10610705-10610338 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 49, 8

Conread position: 54-316
Cow position: chr2:44650206-44650474 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 180
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 23

Conread position: 54-333
Cow position: chr2:16637326-16637602 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 193
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 34, 20

Conread position: 54-388
Cow position: chr2:7326649-7326996 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 236
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 34, 314

Conread position: 54-549
Cow position: chr2:74112849-74112362 (view UCSC Genome Browser custom track)
Alignm length: 509
Alignm identity: 314
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 51, 40

Conread position: 55-383
Cow position: chr2:25028351-25028012 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 216
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 35, 68

Conread position: 55-390
Cow position: chr2:246932-246586 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 219
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 56-383
Cow position: chr2:53540887-53541228 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 224
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 35, 266

Conread position: 58-389
Cow position: chr2:33325211-33324896 (view UCSC Genome Browser custom track)
Alignm length: 334
Alignm identity: 221
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 30, 70

Conread position: 68-389
Cow position: chr2:43676818-43677144 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 29, 41

Conread position: 87-383
Cow position: chr2:33089059-33089352 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 21

Conread position: 125-389
Cow position: chr2:433635-433378 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 179
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 53, 91

Conread position: 152-392
Cow position: chr2:7318553-7318790 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 111, 0

Conread position: 165-331
Cow position: chr2:62815277-62815445 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 160, 0

Conread position: 165-393
Cow position: chr2:41181187-41181416 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 154
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 17, 209

Conread position: 166-383
Cow position: chr2:210966-210746 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 51

Conread position: 166-383
Cow position: chr2:11558925-11559143 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 88

Conread position: 166-387
Cow position: chr2:37788940-37788715 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 94, 124

Conread position: 176-378
Cow position: chr2:13553653-13553856 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 137
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 84, 0

Conread position: 176-383
Cow position: chr2:41047943-41047735 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 176-391
Cow position: chr2:62729596-62729815 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 85, 77

Conread position: 176-392
Cow position: chr2:5869047-5868831 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 84, 58

Conread position: 185-383
Cow position: chr2:27084388-27084191 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 49

Conread position: 187-393
Cow position: chr2:18663733-18663940 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 79, 0

Conread position: 193-389
Cow position: chr2:1108657-1108463 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 136
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 10

Conread position: 432-575
Cow position: chr2:80291470-80291325 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 61, 122

Conread position: 30-336
Cow position: chr20:12436977-12436655 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 208
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr20:8972733-8972359 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 235
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr20:21916081-21916449 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr20:23800331-23800696 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 234
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 66, 23

Conread position: 30-383
Cow position: chr20:28162269-28162637 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-391
Cow position: chr20:25849377-25849010 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 234
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 86, 98

Conread position: 30-391
Cow position: chr20:30429715-30430092 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 60, 0

Conread position: 30-392
Cow position: chr20:3306351-3306711 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 233
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 97, 57

Conread position: 30-392
Cow position: chr20:5466460-5466830 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 240
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 82

Conread position: 30-394
Cow position: chr20:21717869-21718259 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 259
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 25, 0

Conread position: 34-311
Cow position: chr20:39208543-39208263 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 191
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 25

Conread position: 36-392
Cow position: chr20:18967949-18968298 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 243
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 84, 15

Conread position: 40-383
Cow position: chr20:17660287-17659932 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 48, 95

Conread position: 40-386
Cow position: chr20:5937697-5937354 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 52, 65

Conread position: 42-336
Cow position: chr20:21395376-21395680 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 203
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 67

Conread position: 54-383
Cow position: chr20:20441483-20441139 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 221
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 35, 0

Conread position: 54-383
Cow position: chr20:23468198-23467856 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 0

Conread position: 54-394
Cow position: chr20:36893951-36893599 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 228
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 97, 201

Conread position: 87-388
Cow position: chr20:18108010-18108318 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 204
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 41, 0

Conread position: 150-383
Cow position: chr20:23670598-23670365 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 154
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 113, 71

Conread position: 166-383
Cow position: chr20:25899282-25899500 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 30-375
Cow position: chr21:10851633-10851993 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 236
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 19, 300

Conread position: 30-383
Cow position: chr21:3780330-3780698 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 235
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr21:6414468-6414100 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 238

Conread position: 30-383
Cow position: chr21:33253739-33254105 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 231
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr21:37372791-37373150 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 123

Conread position: 30-391
Cow position: chr21:31514758-31514382 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 252
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 105, 328

Conread position: 30-391
Cow position: chr21:39426628-39426999 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 231
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 74, 0

Conread position: 30-397
Cow position: chr21:25125167-25125544 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 238
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 59, 197

Conread position: 34-340
Cow position: chr21:3974478-3974169 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 204
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 59, 46

Conread position: 34-383
Cow position: chr21:2512409-2512773 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 34-383
Cow position: chr21:24085243-24084878 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 244
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 39, 297

Conread position: 34-383
Cow position: chr21:34655396-34655754 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 222
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 117

Conread position: 34-392
Cow position: chr21:21139295-21139643 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 241
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 94, 43

Conread position: 34-393
Cow position: chr21:147484-147857 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 242
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 59, 76

Conread position: 35-383
Cow position: chr21:40270111-40269748 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 53, 0

Conread position: 35-388
Cow position: chr21:405595-405234 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 245
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 93, 239

Conread position: 40-383
Cow position: chr21:10568269-10568622 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 222
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 48, 201

Conread position: 40-383
Cow position: chr21:19612326-19612684 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 235
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 63, 205

Conread position: 40-393
Cow position: chr21:8074402-8074052 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 128, 26

Conread position: 40-401
Cow position: chr21:33710715-33711094 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 251
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 50, 228

Conread position: 40-421
Cow position: chr21:15941243-15941607 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 263
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 30

Conread position: 44-390
Cow position: chr21:22751858-22751514 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 222
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 98, 29

Conread position: 83-393
Cow position: chr21:18340845-18340525 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 206
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 0

Conread position: 154-391
Cow position: chr21:38023824-38024060 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 128, 40

Conread position: 158-375
Cow position: chr21:31639611-31639829 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 164-379
Cow position: chr21:21079403-21079616 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 102, 21

Conread position: 165-392
Cow position: chr21:13185319-13185543 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 95, 39

Conread position: 176-393
Cow position: chr21:10284864-10285081 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 64, 42

Conread position: 184-396
Cow position: chr21:38917274-38917485 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 82, 33

Conread position: 187-382
Cow position: chr21:28999446-28999641 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 133
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 83, 105

Conread position: 195-393
Cow position: chr21:45000993-45001191 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 30

Conread position: 204-393
Cow position: chr21:22871776-22871969 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 60, 29

Conread position: 206-383
Cow position: chr21:13194793-13194968 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 209-383
Cow position: chr21:2417953-2418128 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 121
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 57, 0

Conread position: 13-430
Cow position: chr22:10908468-10908037 (view UCSC Genome Browser custom track)
Alignm length: 433
Alignm identity: 245
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 83, 311

Conread position: 17-333
Cow position: chr22:10303968-10303643 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 240
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 15, 123

Conread position: 30-366
Cow position: chr22:6333098-6333446 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 226
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 64

Conread position: 30-382
Cow position: chr22:45014736-45015097 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 227
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 15

Conread position: 30-383
Cow position: chr22:559320-558956 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 242
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 105, 57

Conread position: 30-383
Cow position: chr22:1880189-1880557 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 61, 201

Conread position: 30-383
Cow position: chr22:3276972-3276604 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 234
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr22:15310555-15310205 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 226
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 64, 158

Conread position: 30-383
Cow position: chr22:17327073-17326705 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 30-383
Cow position: chr22:18028673-18029022 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 227
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 58, 151

Conread position: 30-383
Cow position: chr22:21195112-21194744 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 65, 40

Conread position: 30-383
Cow position: chr22:44368097-44367729 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr22:44492440-44492801 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 230
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr22:44935353-44935715 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 237
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 19, 15

Conread position: 30-386
Cow position: chr22:46580333-46579962 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 232
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 30-390
Cow position: chr22:290312-289935 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 246
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 75, 9

Conread position: 30-391
Cow position: chr22:39468129-39467752 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 251
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 103, 63

Conread position: 34-393
Cow position: chr22:13547383-13547017 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 254
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 96, 70

Conread position: 35-383
Cow position: chr22:538500-538861 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 235
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 54, 198

Conread position: 35-383
Cow position: chr22:44397820-44398182 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 195

Conread position: 40-258
Cow position: chr22:31117848-31117626 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 103

Conread position: 40-375
Cow position: chr22:38960501-38960852 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 234
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 53, 0

Conread position: 40-383
Cow position: chr22:34169734-34170087 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 235
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 93, 53

Conread position: 44-383
Cow position: chr22:13773918-13774267 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 226
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 185

Conread position: 54-383
Cow position: chr22:19142275-19141937 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 218
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 72, 272

Conread position: 61-382
Cow position: chr22:35912037-35911705 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 221
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 37, 258

Conread position: 152-316
Cow position: chr22:39724855-39724691 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 7, 120

Conread position: 166-383
Cow position: chr22:32283147-32282929 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 173-383
Cow position: chr22:29332892-29333107 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 66, 154

Conread position: 176-383
Cow position: chr22:29499085-29499293 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 177-393
Cow position: chr22:37413231-37413444 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 89, 21

Conread position: 178-420
Cow position: chr22:7291646-7291890 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 176
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 80, 99

Conread position: 180-383
Cow position: chr22:40361725-40361522 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 80, 51

Conread position: 185-383
Cow position: chr22:21336508-21336707 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 41, 32

Conread position: 30-298
Cow position: chr23:4513865-4514147 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 185
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 59, 0

Conread position: 30-382
Cow position: chr23:23172159-23172524 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr23:2759282-2759647 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 236
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 103, 57

Conread position: 30-383
Cow position: chr23:7314291-7314659 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 239
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 238

Conread position: 30-383
Cow position: chr23:11714485-11714117 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 59, 0

Conread position: 30-383
Cow position: chr23:15218500-15218139 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 227
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 80, 93

Conread position: 30-383
Cow position: chr23:41141846-41141478 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 243
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 34-383
Cow position: chr23:965110-964749 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 234
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 54, 340

Conread position: 34-383
Cow position: chr23:35274029-35274393 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 239
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 65, 215

Conread position: 34-383
Cow position: chr23:36029993-36029635 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 196

Conread position: 34-433
Cow position: chr23:14263258-14263649 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 267
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 69, 36

Conread position: 54-383
Cow position: chr23:16055176-16055520 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 223
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 267

Conread position: 84-387
Cow position: chr23:12547625-12547936 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 222
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 76, 248

Conread position: 170-412
Cow position: chr23:11074944-11074696 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 162
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 176-392
Cow position: chr23:608256-608470 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 144
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 1-393
Cow position: chr24:6344384-6344769 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 255
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 116, 122

Conread position: 18-383
Cow position: chr24:4414080-4413717 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 247
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 108, 11

Conread position: 30-337
Cow position: chr24:44018979-44019301 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 212
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr24:9545526-9545894 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 235
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 16

Conread position: 30-383
Cow position: chr24:13044157-13043789 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 243
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 19

Conread position: 30-383
Cow position: chr24:16560843-16560472 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 238
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 19, 13

Conread position: 30-383
Cow position: chr24:19834875-19835242 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 240
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 58, 203

Conread position: 30-383
Cow position: chr24:22972533-22972903 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 30-383
Cow position: chr24:23504389-23504021 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 61, 201

Conread position: 30-391
Cow position: chr24:147141-146760 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 253
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 60, 0

Conread position: 34-383
Cow position: chr24:38585643-38585297 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 215
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 60

Conread position: 40-383
Cow position: chr24:13233739-13234086 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 221
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 301

Conread position: 40-392
Cow position: chr24:5776918-5776554 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 47

Conread position: 41-383
Cow position: chr24:12334247-12333900 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 219
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 47, 9

Conread position: 43-388
Cow position: chr24:5887769-5887409 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 244
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 50, 7

Conread position: 43-433
Cow position: chr24:29352364-29351971 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 266
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 46, 87

Conread position: 48-340
Cow position: chr24:42584271-42583975 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 197
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 51, 199

Conread position: 51-313
Cow position: chr24:8753825-8754083 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 42, 104

Conread position: 54-383
Cow position: chr24:6963256-6962912 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 226
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 54-383
Cow position: chr24:36298912-36299248 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 219
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 45

Conread position: 54-389
Cow position: chr24:21072769-21073111 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 90, 43

Conread position: 55-376
Cow position: chr24:6060926-6061240 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 208
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 49, 0

Conread position: 55-393
Cow position: chr24:13512274-13511942 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 73, 57

Conread position: 70-407
Cow position: chr24:13322345-13322678 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 219
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 58, 159

Conread position: 85-383
Cow position: chr24:40469830-40469532 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 190
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 116

Conread position: 87-383
Cow position: chr24:20286383-20286074 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 200
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 46, 142

Conread position: 99-388
Cow position: chr24:39405157-39404875 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 200
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 58, 39

Conread position: 149-383
Cow position: chr24:6353738-6353973 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 159
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 41

Conread position: 154-393
Cow position: chr24:9769654-9769892 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 161
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 74, 64

Conread position: 167-393
Cow position: chr24:6198517-6198741 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 154
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 90, 12

Conread position: 171-392
Cow position: chr24:30865124-30865346 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 160
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 87, 18

Conread position: 172-393
Cow position: chr24:37199287-37199066 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 87, 37

Conread position: 173-391
Cow position: chr24:23094397-23094177 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 146
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 173-393
Cow position: chr24:1493189-1493405 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 87, 116

Conread position: 185-399
Cow position: chr24:6272952-6272737 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 143
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 188-383
Cow position: chr24:13086845-13086645 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 75, 163

Conread position: 206-375
Cow position: chr24:1098596-1098766 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 74, 134

Conread position: 30-301
Cow position: chr25:13999195-13999471 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 179
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 58, 151

Conread position: 30-383
Cow position: chr25:12941238-12940872 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 58, 164

Conread position: 30-383
Cow position: chr25:13062277-13061909 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr25:13782480-13782848 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr25:17655865-17656202 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 221
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 30-383
Cow position: chr25:20346550-20346182 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr25:20631057-20631425 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 244
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 62, 268

Conread position: 30-383
Cow position: chr25:25508139-25508505 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 236
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 59, 345

Conread position: 30-383
Cow position: chr25:32580955-32581323 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 244
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr25:34345563-34345204 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 234
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 90

Conread position: 30-391
Cow position: chr25:27523175-27522818 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 233
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 58, 105

Conread position: 30-392
Cow position: chr25:4533068-4532700 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 256
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 109, 27

Conread position: 34-258
Cow position: chr25:13793989-13793757 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 61, 34

Conread position: 34-388
Cow position: chr25:10944150-10943781 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 242
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 59, 265

Conread position: 34-393
Cow position: chr25:30149274-30148915 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 251
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 62, 154

Conread position: 40-384
Cow position: chr25:18281323-18280992 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 240
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 48, 28

Conread position: 40-389
Cow position: chr25:35021221-35020883 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 234
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 46, 118

Conread position: 42-393
Cow position: chr25:23847768-23847428 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 241
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 47, 67

Conread position: 51-383
Cow position: chr25:19427888-19427554 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 190
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 111, 202

Conread position: 55-383
Cow position: chr25:17588104-17587766 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 216
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 42, 71

Conread position: 84-388
Cow position: chr25:33209649-33209341 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 208
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 18, 10

Conread position: 153-388
Cow position: chr25:13771976-13771741 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 154
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 107, 233

Conread position: 156-392
Cow position: chr25:25288547-25288784 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 169
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 171-396
Cow position: chr25:32153394-32153620 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 150
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 0

Conread position: 173-406
Cow position: chr25:26988673-26988901 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 165
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 59, 91

Conread position: 173-429
Cow position: chr25:35627858-35627599 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 171
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 93, 246

Conread position: 176-421
Cow position: chr25:19018593-19018341 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 181
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 10, 176

Conread position: 186-397
Cow position: chr25:26455062-26455276 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 149
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 0

Conread position: 11-388
Cow position: chr26:8192916-8192525 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 249
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 39, 20

Conread position: 30-382
Cow position: chr26:6847999-6847648 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 229
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 96, 63

Conread position: 30-383
Cow position: chr26:3029395-3029027 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 69, 0

Conread position: 30-383
Cow position: chr26:8871278-8871645 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 51

Conread position: 30-383
Cow position: chr26:9113325-9113690 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 61, 307

Conread position: 30-383
Cow position: chr26:12587110-12586742 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 238
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr26:18853660-18854024 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 237
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 100, 57

Conread position: 30-383
Cow position: chr26:33148431-33148063 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 30-392
Cow position: chr26:2350760-2350379 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 238
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 34-331
Cow position: chr26:28229226-28229526 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 64

Conread position: 39-282
Cow position: chr26:33932875-33933133 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 174
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 52, 103

Conread position: 40-390
Cow position: chr26:21708946-21708585 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 259
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 56

Conread position: 40-392
Cow position: chr26:16478783-16479139 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 250
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 90, 175

Conread position: 40-492
Cow position: chr26:26271168-26271620 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 297
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 88, 37

Conread position: 97-395
Cow position: chr26:15552625-15552331 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 200
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 42, 105

Conread position: 114-388
Cow position: chr26:26998828-26998555 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 180
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 14, 27

Conread position: 158-393
Cow position: chr26:4213150-4212919 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 149, 31

Conread position: 171-389
Cow position: chr26:9640230-9640451 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 164

Conread position: 183-396
Cow position: chr26:21007752-21007968 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 30-341
Cow position: chr27:29056546-29056872 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 216
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 238

Conread position: 30-383
Cow position: chr27:167540-167174 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 231
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr27:1677185-1676819 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 65, 23

Conread position: 30-383
Cow position: chr27:8199194-8199562 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 63, 307

Conread position: 30-383
Cow position: chr27:9991823-9991462 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 236
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 96, 62

Conread position: 30-391
Cow position: chr27:12748423-12748802 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 58, 0

Conread position: 30-391
Cow position: chr27:19524940-19525311 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 246
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 67, 193

Conread position: 34-383
Cow position: chr27:798177-797813 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 57, 0

Conread position: 38-380
Cow position: chr27:26032464-26032123 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 8

Conread position: 40-311
Cow position: chr27:16967129-16966854 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 182
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 88, 57

Conread position: 40-371
Cow position: chr27:17818219-17818560 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 228
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 53

Conread position: 42-383
Cow position: chr27:15635943-15635589 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 232
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 46, 11

Conread position: 43-389
Cow position: chr27:22676883-22676541 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 248
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 19, 37

Conread position: 43-393
Cow position: chr27:28893023-28893372 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 234
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 118, 44

Conread position: 56-364
Cow position: chr27:14323599-14323905 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 203
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 104, 18

Conread position: 59-423
Cow position: chr27:19135259-19135635 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 240
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 29, 45

Conread position: 149-393
Cow position: chr27:2378044-2378285 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 166
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 8, 87

Conread position: 158-382
Cow position: chr27:25872103-25872327 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 154
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 102, 36

Conread position: 165-387
Cow position: chr27:30911764-30911986 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 95, 188

Conread position: 187-434
Cow position: chr27:29856253-29856509 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 430-575
Cow position: chr27:12748788-12748939 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 62, 128

Conread position: 2-391
Cow position: chr28:12408817-12408414 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 262
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 88, 9

Conread position: 30-333
Cow position: chr28:24173351-24173043 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 198
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 96, 70

Conread position: 30-382
Cow position: chr28:1166459-1166096 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 235
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 130, 104

Conread position: 30-383
Cow position: chr28:1216401-1216039 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 239
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 96, 63

Conread position: 30-383
Cow position: chr28:1459525-1459893 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 240
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 61, 238

Conread position: 30-383
Cow position: chr28:3190822-3190454 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr28:10580443-10580074 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 244
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 69, 51

Conread position: 30-383
Cow position: chr28:17389832-17390201 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 242
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 30-383
Cow position: chr28:17665877-17665529 (view UCSC Genome Browser custom track)
Alignm length: 358
Alignm identity: 227
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 58, 141

Conread position: 30-383
Cow position: chr28:22259720-22259357 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 103, 67

Conread position: 30-383
Cow position: chr28:26424828-26424463 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 235
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 58, 210

Conread position: 30-384
Cow position: chr28:24590287-24590655 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 244
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 13, 23

Conread position: 30-391
Cow position: chr28:784093-784465 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 249
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 97, 10

Conread position: 30-391
Cow position: chr28:7827420-7827787 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 247
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 69

Conread position: 34-342
Cow position: chr28:33384462-33384149 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 211
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 54, 215

Conread position: 34-383
Cow position: chr28:1506301-1506664 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 241
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 59, 36

Conread position: 34-383
Cow position: chr28:5938922-5939286 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 238
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 59, 0

Conread position: 34-383
Cow position: chr28:27679579-27679939 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 252
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 58, 191

Conread position: 34-383
Cow position: chr28:32790957-32790601 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 228
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 59, 166

Conread position: 34-392
Cow position: chr28:9715109-9714749 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 257
Alignm E-value: 8.99634e-43
Alignm gaps (pig, cow): 93, 36

Conread position: 35-382
Cow position: chr28:1954795-1955152 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 231
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 98, 64

Conread position: 42-383
Cow position: chr28:29821443-29821786 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 224
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 73, 8

Conread position: 51-375
Cow position: chr28:10645983-10645648 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 214
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 46, 0

Conread position: 54-383
Cow position: chr28:5750249-5749905 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 220
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 178

Conread position: 54-392
Cow position: chr28:29337952-29338295 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 221
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 74, 27

Conread position: 55-383
Cow position: chr28:34526448-34526119 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 219
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 42, 66

Conread position: 59-383
Cow position: chr28:9288409-9288745 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 217
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 166-383
Cow position: chr28:7059088-7058870 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 147
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 171-431
Cow position: chr28:22457358-22457616 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 85, 118

Conread position: 176-383
Cow position: chr28:31591149-31591357 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 30-339
Cow position: chr29:16661402-16661715 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 205
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 53

Conread position: 30-382
Cow position: chr29:34798417-34798051 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 235
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 58, 300

Conread position: 30-383
Cow position: chr29:2691557-2691924 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 237
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 74, 94

Conread position: 30-383
Cow position: chr29:6264606-6264237 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 240
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 263

Conread position: 30-383
Cow position: chr29:7845784-7846152 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr29:10022938-10022570 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 30-383
Cow position: chr29:10822522-10822156 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 242
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 96, 200

Conread position: 30-383
Cow position: chr29:13583475-13583843 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 233
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 30-383
Cow position: chr29:16345608-16345973 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 60, 28

Conread position: 30-383
Cow position: chr29:19526892-19526524 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr29:19655018-19655380 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 233
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 103, 63

Conread position: 30-383
Cow position: chr29:26163440-26163074 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 236
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 58, 235

Conread position: 30-383
Cow position: chr29:27180359-27179991 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 61, 238

Conread position: 30-383
Cow position: chr29:31182802-31183164 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 232
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr29:45461141-45461508 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 236
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 58, 0

Conread position: 30-390
Cow position: chr29:4633230-4632871 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 231
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 112

Conread position: 30-391
Cow position: chr29:21431457-21431082 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 243
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 61, 32

Conread position: 30-392
Cow position: chr29:647208-647578 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 249
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 65, 106

Conread position: 34-383
Cow position: chr29:27979522-27979159 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 236
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 56, 190

Conread position: 34-392
Cow position: chr29:44601199-44600848 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 6

Conread position: 34-394
Cow position: chr29:37165491-37165851 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 248
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 128, 38

Conread position: 35-383
Cow position: chr29:409849-409500 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 223
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 54, 110

Conread position: 40-316
Cow position: chr29:23905240-23905509 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 184
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 49, 83

Conread position: 40-370
Cow position: chr29:24335596-24335254 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 232
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 87, 44

Conread position: 40-375
Cow position: chr29:35298314-35298664 (view UCSC Genome Browser custom track)
Alignm length: 352
Alignm identity: 229
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 49, 283

Conread position: 40-383
Cow position: chr29:23977527-23977885 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 230
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 48, 0

Conread position: 40-393
Cow position: chr29:31547271-31546912 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 230
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 75, 43

Conread position: 48-409
Cow position: chr29:9877098-9876721 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 250
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 7, 195

Conread position: 54-383
Cow position: chr29:43324937-43325279 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 228
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 34, 273

Conread position: 54-389
Cow position: chr29:3176019-3175684 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 224
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 122, 19

Conread position: 112-392
Cow position: chr29:40612388-40612103 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 197
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 25, 65

Conread position: 176-383
Cow position: chr29:609094-608886 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 84, 0

Conread position: 176-383
Cow position: chr29:36634829-36634622 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 141
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 64, 55

Conread position: 176-391
Cow position: chr29:42204651-42204867 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 0

Conread position: 183-392
Cow position: chr29:26215843-26216047 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 50

Conread position: 211-383
Cow position: chr29:2073697-2073870 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 123
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 18-388
Cow position: chr3:79122301-79121926 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 256
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 75, 7

Conread position: 30-382
Cow position: chr3:36877342-36876983 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 231
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 30-382
Cow position: chr3:64016055-64015706 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 228
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 96, 118

Conread position: 30-383
Cow position: chr3:595446-595804 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 234
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 30-383
Cow position: chr3:1742641-1743009 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 242
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:2368027-2367661 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 232
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 69, 265

Conread position: 30-383
Cow position: chr3:2709557-2709192 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 238
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 60, 88

Conread position: 30-383
Cow position: chr3:2870098-2870466 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:2918779-2919142 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 233
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:4287399-4287764 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 61, 0

Conread position: 30-383
Cow position: chr3:5993770-5993410 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 227
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 63, 189

Conread position: 30-383
Cow position: chr3:16224195-16224563 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 239
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 63, 0

Conread position: 30-383
Cow position: chr3:20382338-20382713 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 56, 210

Conread position: 30-383
Cow position: chr3:23289024-23288656 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 238
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 59, 192

Conread position: 30-383
Cow position: chr3:24644534-24644891 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 244
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 130, 36

Conread position: 30-383
Cow position: chr3:29575814-29575446 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 236
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 65, 0

Conread position: 30-383
Cow position: chr3:30315859-30316225 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 234
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 67, 33

Conread position: 30-383
Cow position: chr3:40824702-40825070 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 246
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 58, 200

Conread position: 30-383
Cow position: chr3:64651947-64652286 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 226
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 230, 67

Conread position: 30-383
Cow position: chr3:68698663-68698297 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 233
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 272

Conread position: 30-383
Cow position: chr3:68891260-68890899 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 241
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 61, 85

Conread position: 30-383
Cow position: chr3:72631376-72631734 (view UCSC Genome Browser custom track)
Alignm length: 363
Alignm identity: 226
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 62

Conread position: 30-383
Cow position: chr3:78026103-78025744 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 236
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 96, 322

Conread position: 30-384
Cow position: chr3:48058051-48057682 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 58, 202

Conread position: 30-387
Cow position: chr3:82638405-82638773 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 245
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 101, 54

Conread position: 30-391
Cow position: chr3:3524325-3524700 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 246
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 103, 67

Conread position: 30-391
Cow position: chr3:5952871-5952498 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 245
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 103, 44

Conread position: 30-391
Cow position: chr3:6783677-6784054 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 241
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 30-391
Cow position: chr3:37970356-37970734 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 247
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 66, 0

Conread position: 30-391
Cow position: chr3:44925372-44925752 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 247
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 66, 256

Conread position: 34-383
Cow position: chr3:7313160-7312799 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 250
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 55, 106

Conread position: 34-383
Cow position: chr3:56100367-56100010 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 226
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 58, 32

Conread position: 34-392
Cow position: chr3:19799858-19799492 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 231
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 62, 0

Conread position: 35-383
Cow position: chr3:34506029-34505675 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 225
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 64

Conread position: 40-383
Cow position: chr3:3840197-3839840 (view UCSC Genome Browser custom track)
Alignm length: 360
Alignm identity: 233
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 50, 231

Conread position: 40-383
Cow position: chr3:24457865-24457503 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 246
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 18, 204

Conread position: 40-383
Cow position: chr3:45034059-45034417 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 231
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 40-383
Cow position: chr3:57483403-57483048 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 229
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 92, 53

Conread position: 40-395
Cow position: chr3:62503445-62503813 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 248
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 57, 254

Conread position: 41-285
Cow position: chr3:65207900-65207643 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 177
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 56

Conread position: 48-383
Cow position: chr3:54291251-54290904 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 222
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 80, 60

Conread position: 54-383
Cow position: chr3:23206540-23206198 (view UCSC Genome Browser custom track)
Alignm length: 346
Alignm identity: 222
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 269

Conread position: 54-383
Cow position: chr3:36863124-36862780 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 222
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 54-383
Cow position: chr3:37626331-37626659 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 212
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 66

Conread position: 54-383
Cow position: chr3:56295520-56295863 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 222
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 37, 51

Conread position: 54-391
Cow position: chr3:19720324-19719972 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 36, 299

Conread position: 57-382
Cow position: chr3:19945581-19945927 (view UCSC Genome Browser custom track)
Alignm length: 347
Alignm identity: 224
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 31, 0

Conread position: 70-431
Cow position: chr3:72163628-72163257 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 235
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 90, 141

Conread position: 84-383
Cow position: chr3:53516975-53517287 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 201
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 84-393
Cow position: chr3:45983060-45982743 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 205
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 22, 228

Conread position: 91-390
Cow position: chr3:70197593-70197911 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 43, 281

Conread position: 109-393
Cow position: chr3:63946535-63946818 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 207
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 15, 37

Conread position: 114-338
Cow position: chr3:42053273-42053046 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 14, 27

Conread position: 124-390
Cow position: chr3:57979000-57978737 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 186
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 15

Conread position: 155-393
Cow position: chr3:71205876-71206114 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 159
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 101, 11

Conread position: 158-378
Cow position: chr3:31319813-31320029 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 152
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 102, 73

Conread position: 158-389
Cow position: chr3:23944085-23943854 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 108, 32

Conread position: 162-383
Cow position: chr3:58784700-58784478 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 98, 0

Conread position: 166-383
Cow position: chr3:21028158-21027940 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 94, 150

Conread position: 166-383
Cow position: chr3:43191832-43191614 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 166-383
Cow position: chr3:51857231-51857013 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 88

Conread position: 166-392
Cow position: chr3:8438500-8438719 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 90, 150

Conread position: 171-393
Cow position: chr3:58167140-58167363 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 171-393
Cow position: chr3:69099375-69099156 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 155
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 171-393
Cow position: chr3:78908522-78908302 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 55, 46

Conread position: 176-391
Cow position: chr3:19940400-19940615 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 150, 93

Conread position: 185-316
Cow position: chr3:12689194-12689060 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 53, 114

Conread position: 185-391
Cow position: chr3:4736447-4736242 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 106

Conread position: 29-267
Cow position: chr4:47486428-47486678 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 169
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 30-281
Cow position: chr4:37322-37070 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 169
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 115

Conread position: 30-336
Cow position: chr4:20804692-20804988 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 198
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 10

Conread position: 30-383
Cow position: chr4:9355495-9355860 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 231
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 109, 57

Conread position: 30-383
Cow position: chr4:14386934-14387303 (view