Non-Coding RNA Search

Cow genome map


           Conread name:
           Mixc-0031e14
        

               Conread position:
               206-627
               

               Cow position:
               chr10:8996482-8996895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               267
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               273-638
               

               Cow position:
               chr10:9010193-9010550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               224
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr10:9010135-9010466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               308-638
               

               Cow position:
               chr10:9031599-9031271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr10:8996078-8996402 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr10:8996414-8996738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr10:8996331-8996654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               116, 106
               

               Conread position:
               316-599
               

               Cow position:
               chr10:8996500-8996783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-638
               

               Cow position:
               chr10:8996164-8996486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-563
               

               Cow position:
               chr10:9010318-9010559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               127, 122
               

               Conread position:
               322-638
               

               Cow position:
               chr10:8996254-8996570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr10:9009898-9010214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-639
               

               Cow position:
               chr10:9031503-9031186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               330-638
               

               Cow position:
               chr10:8996010-8996318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               207
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               330-638
               

               Cow position:
               chr10:9010074-9010382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               122, 109
               

               Conread position:
               334-637
               

               Cow position:
               chr10:21938834-21939137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               198
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               184, 195
               

               Conread position:
               372-638
               

               Cow position:
               chr10:9009864-9010130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               241, 229
               

               Conread position:
               382-638
               

               Cow position:
               chr10:9031611-9031355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               174
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               405-639
               

               Cow position:
               chr10:8996001-8996235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr11:74554758-74555081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-639
               

               Cow position:
               chr11:74554254-74554578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               216, 221
               

               Conread position:
               319-564
               

               Cow position:
               chr11:74554847-74555091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               319-599
               

               Cow position:
               chr11:74554343-74554622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr11:74554513-74554829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               111, 133
               

               Conread position:
               330-638
               

               Cow position:
               chr11:74554185-74554493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               285, 290
               

               Conread position:
               404-638
               

               Cow position:
               chr11:74554175-74554409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr13:39984758-39984427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr13:56291843-56292172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               308-638
               

               Cow position:
               chr13:39984503-39984175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               305, 11
               

               Conread position:
               308-638
               

               Cow position:
               chr13:39984587-39984259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               314-638
               

               Cow position:
               chr13:39984835-39984511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               204
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               195, 201
               

               Conread position:
               315-638
               

               Cow position:
               chr13:39930910-39930587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               315-638
               

               Cow position:
               chr13:39930994-39930671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               315-638
               

               Cow position:
               chr13:39931078-39930755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               70, 61
               

               Conread position:
               324-634
               

               Cow position:
               chr13:39984909-39984599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               111, 130
               

               Conread position:
               326-637
               

               Cow position:
               chr13:56291777-56292090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               334-591
               

               Cow position:
               chr13:56292622-56292877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               155, 109
               

               Conread position:
               341-638
               

               Cow position:
               chr13:39931136-39930839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               44, 35
               

               Conread position:
               372-638
               

               Cow position:
               chr13:39984609-39984343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               376-635
               

               Cow position:
               chr13:56292580-56292834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               183, 151
               

               Conread position:
               383-638
               

               Cow position:
               chr13:39931176-39930923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               171
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               227, 26
               

               Conread position:
               417-638
               

               Cow position:
               chr13:39984900-39984679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               111, 121
               

               Conread position:
               205-638
               

               Cow position:
               chr14:25794479-25794904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               45, 75
               

               Conread position:
               259-638
               

               Cow position:
               chr14:447986-447615 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               303-638
               

               Cow position:
               chr14:25794907-25795240 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               304-599
               

               Cow position:
               chr14:25783786-25783493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               304-600
               

               Cow position:
               chr14:25784206-25783912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               190
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               304-638
               

               Cow position:
               chr14:25783702-25783370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr14:25784374-25784042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr14:25794656-25794988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 10
               

               Conread position:
               305-638
               

               Cow position:
               chr14:25784121-25783790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               209
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr14:25794825-25795156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               307-638
               

               Cow position:
               chr14:25837076-25836745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr14:3127672-3127996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr14:25784450-25784126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               314-638
               

               Cow position:
               chr14:25794412-25794736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               299, 308
               

               Conread position:
               314-638
               

               Cow position:
               chr14:25837153-25836829 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-600
               

               Cow position:
               chr14:3156163-3155878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               65, 56
               

               Conread position:
               315-638
               

               Cow position:
               chr14:448022-447699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               209
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               104, 99
               

               Conread position:
               315-638
               

               Cow position:
               chr14:3127589-3127912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr14:3156415-3156092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr14:25783861-25783538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               46, 58
               

               Conread position:
               315-638
               

               Cow position:
               chr14:25859869-25859546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               316-638
               

               Cow position:
               chr14:3127338-3127660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 33
               

               Conread position:
               322-600
               

               Cow position:
               chr14:25784526-25784248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr14:681153-680837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr14:3079916-3080232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr14:3127512-3127828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-638
               

               Cow position:
               chr14:25783938-25783622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr14:25859610-25859294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               51, 28
               

               Conread position:
               322-638
               

               Cow position:
               chr14:25860198-25859882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               322-638
               

               Cow position:
               chr14:25876997-25876681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               35, 30
               

               Conread position:
               322-638
               

               Cow position:
               chr14:25877249-25876933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 30
               

               Conread position:
               324-638
               

               Cow position:
               chr14:3079666-3079980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               327-638
               

               Cow position:
               chr14:681064-680753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               330-638
               

               Cow position:
               chr14:25794259-25794568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               334-587
               

               Cow position:
               chr14:25859430-25859177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               160, 152
               

               Conread position:
               336-638
               

               Cow position:
               chr14:25784680-25784378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               341-599
               

               Cow position:
               chr14:3156305-3156047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-638
               

               Cow position:
               chr14:3155732-3155435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               353-638
               

               Cow position:
               chr14:680618-680333 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               355-638
               

               Cow position:
               chr14:25836608-25836325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               371-638
               

               Cow position:
               chr14:25836928-25836661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               372-638
               

               Cow position:
               chr14:681271-681005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               109, 113
               

               Conread position:
               372-638
               

               Cow position:
               chr14:25836843-25836577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               373-638
               

               Cow position:
               chr14:25836507-25836241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               373-638
               

               Cow position:
               chr14:25876863-25876597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               373-638
               

               Cow position:
               chr14:25877451-25877185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 229
               

               Conread position:
               374-638
               

               Cow position:
               chr14:25911290-25911025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               205-638
               

               Cow position:
               chr16:14627302-14627727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               122, 92
               

               Conread position:
               304-599
               

               Cow position:
               chr16:14627143-14627436 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               196
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr16:14626808-14627139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               223
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               314-597
               

               Cow position:
               chr16:14627235-14627518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               270, 253
               

               Conread position:
               314-638
               

               Cow position:
               chr16:14627571-14627895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               322-632
               

               Cow position:
               chr16:14627495-14627805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               199
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               322-638
               

               Cow position:
               chr16:14626907-14627223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               333-638
               

               Cow position:
               chr16:14626750-14627055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               206-638
               

               Cow position:
               chr17:22552486-22552910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               258-638
               

               Cow position:
               chr17:22552454-22552826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               259-636
               

               Cow position:
               chr17:22452152-22452522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               269, 37
               

               Conread position:
               260-638
               

               Cow position:
               chr17:22551784-22552154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               273-638
               

               Cow position:
               chr17:22552637-22552994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 23
               

               Conread position:
               304-632
               

               Cow position:
               chr17:22498531-22498859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               244, 227
               

               Conread position:
               305-638
               

               Cow position:
               chr17:22473775-22473444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               308-638
               

               Cow position:
               chr17:22473688-22473360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               219
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               308-638
               

               Cow position:
               chr17:22498789-22499117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               224, 11
               

               Conread position:
               315-578
               

               Cow position:
               chr17:22499130-22499393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-600
               

               Cow position:
               chr17:22498626-22498911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22451864-22452187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22498962-22499285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22551915-22552238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22551999-22552322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22552083-22552406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22552419-22552742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               222
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22552755-22553078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22552839-22553162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22589585-22589908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr17:22589669-22589992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-639
               

               Cow position:
               chr17:22473851-22473527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               217, 230
               

               Conread position:
               316-599
               

               Cow position:
               chr17:22590006-22590289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               317-640
               

               Cow position:
               chr17:22551581-22551904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               322-638
               

               Cow position:
               chr17:22473592-22473276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               28, 32
               

               Conread position:
               322-638
               

               Cow position:
               chr17:22498716-22499033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 302
               

               Conread position:
               322-638
               

               Cow position:
               chr17:22551502-22551818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr17:22551754-22552070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-638
               

               Cow position:
               chr17:22589256-22589572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               323-638
               

               Cow position:
               chr17:22473926-22473612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               293, 7
               

               Conread position:
               325-600
               

               Cow position:
               chr17:22499057-22499331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               38, 9
               

               Conread position:
               326-638
               

               Cow position:
               chr17:22552179-22552490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               326-638
               

               Cow position:
               chr17:22589345-22589656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               215
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               35, 5
               

               Conread position:
               326-638
               

               Cow position:
               chr17:22589933-22590244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               328-611
               

               Cow position:
               chr17:22452129-22452412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               332-638
               

               Cow position:
               chr17:22451797-22452103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               29, 41
               

               Conread position:
               333-638
               

               Cow position:
               chr17:22589183-22589488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               333-639
               

               Cow position:
               chr17:22552269-22552575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               334-638
               

               Cow position:
               chr17:22452051-22452355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-632
               

               Cow position:
               chr17:22498904-22499195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-638
               

               Cow position:
               chr17:22551689-22551986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               341-638
               

               Cow position:
               chr17:22552361-22552658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               204
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               346-638
               

               Cow position:
               chr17:22589532-22589824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               21, 27
               

               Conread position:
               354-638
               

               Cow position:
               chr17:22589792-22590076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 20
               

               Conread position:
               364-638
               

               Cow position:
               chr17:22451745-22452019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               79, 92
               

               Conread position:
               373-638
               

               Cow position:
               chr17:22589895-22590160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               175, 162
               

               Conread position:
               383-638
               

               Cow position:
               chr17:22473952-22473696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               384-638
               

               Cow position:
               chr17:22551480-22551734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               183
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               407-638
               

               Cow position:
               chr17:22589173-22589404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               206, 194
               

               Conread position:
               124-640
               

               Cow position:
               chr18:42828108-42827597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               517
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               174-638
               

               Cow position:
               chr18:52447590-52447135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               237, 31
               

               Conread position:
               174-638
               

               Cow position:
               chr18:52447842-52447387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               177-638
               

               Cow position:
               chr18:43092855-43093307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               297
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               93, 29
               

               Conread position:
               179-638
               

               Cow position:
               chr18:51812239-51812689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               291
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               88, 27
               

               Conread position:
               181-638
               

               Cow position:
               chr18:42837461-42837909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               182-638
               

               Cow position:
               chr18:41198301-41197854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               189-638
               

               Cow position:
               chr18:50100113-50099674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               176, 11
               

               Conread position:
               190-638
               

               Cow position:
               chr18:52428939-52428500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               190-638
               

               Cow position:
               chr18:52434120-52433681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               80, 16
               

               Conread position:
               190-639
               

               Cow position:
               chr18:52448331-52447890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               286
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               32, 16
               

               Conread position:
               195-638
               

               Cow position:
               chr18:52428514-52428080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               270
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               415, 11
               

               Conread position:
               195-638
               

               Cow position:
               chr18:52428850-52428416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               172, 11
               

               Conread position:
               195-638
               

               Cow position:
               chr18:52433695-52433261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               272
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               409, 11
               

               Conread position:
               205-572
               

               Cow position:
               chr18:41197859-41197500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               247
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               17, 34
               

               Conread position:
               205-638
               

               Cow position:
               chr18:41198111-41197686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               205-638
               

               Cow position:
               chr18:41198447-41198022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 34
               

               Conread position:
               205-638
               

               Cow position:
               chr18:41198699-41198274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 91
               

               Conread position:
               205-638
               

               Cow position:
               chr18:42743929-42744354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 35
               

               Conread position:
               205-638
               

               Cow position:
               chr18:50059003-50059428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               14, 38
               

               Conread position:
               206-600
               

               Cow position:
               chr18:53526227-53525841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               206-638
               

               Cow position:
               chr18:41197942-41197518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               206-638
               

               Cow position:
               chr18:42744266-42744690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               16, 34
               

               Conread position:
               210-599
               

               Cow position:
               chr18:43022036-43022417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               229-638
               

               Cow position:
               chr18:43093076-43093475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 9
               

               Conread position:
               231-639
               

               Cow position:
               chr18:42792146-42791746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 65
               

               Conread position:
               238-638
               

               Cow position:
               chr18:44184299-44184691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               41, 34
               

               Conread position:
               256-638
               

               Cow position:
               chr18:42792205-42791831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               256-639
               

               Cow position:
               chr18:1418319-1417944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               153, 40
               

               Conread position:
               256-639
               

               Cow position:
               chr18:50083935-50083560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               258-638
               

               Cow position:
               chr18:42792035-42791663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               238
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               69, 38
               

               Conread position:
               259-638
               

               Cow position:
               chr18:43168442-43168071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 40
               

               Conread position:
               259-638
               

               Cow position:
               chr18:49032480-49032851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               260-638
               

               Cow position:
               chr18:41198308-41197938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               260-638
               

               Cow position:
               chr18:50084015-50083645 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               266-638
               

               Cow position:
               chr18:44397796-44398160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               267-638
               

               Cow position:
               chr18:49032572-49032935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               269-638
               

               Cow position:
               chr18:44398051-44398412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               273-638
               

               Cow position:
               chr18:42792272-42791915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               274-595
               

               Cow position:
               chr18:44398140-44398453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               274, 28
               

               Conread position:
               275-638
               

               Cow position:
               chr18:44397721-44398076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               278-632
               

               Cow position:
               chr18:42674690-42675036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               303-600
               

               Cow position:
               chr18:44184610-44184905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               192
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               122, 11
               

               Conread position:
               303-638
               

               Cow position:
               chr18:51789027-51789362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               47, 53
               

               Conread position:
               303-638
               

               Cow position:
               chr18:51811934-51812269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               78, 70
               

               Conread position:
               303-638
               

               Cow position:
               chr18:56129236-56128904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               77, 14
               

               Conread position:
               304-600
               

               Cow position:
               chr18:40085660-40085955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 9
               

               Conread position:
               304-600
               

               Cow position:
               chr18:41949073-41949367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               304-600
               

               Cow position:
               chr18:42984949-42985243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               304-600
               

               Cow position:
               chr18:43174997-43175291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:41948737-41949069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43022544-43022876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               310, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43093059-43093391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43093395-43093724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43119628-43119960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               231, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43119796-43120128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               224
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               68, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43168487-43168155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 14
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43174745-43175077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               73, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:43174913-43175245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               304-638
               

               Cow position:
               chr18:44253448-44253780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               218
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               59, 10
               

               Conread position:
               304-638
               

               Cow position:
               chr18:52428160-52427828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               217, 14
               

               Conread position:
               304-638
               

               Cow position:
               chr18:52433341-52433009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               304-638
               

               Cow position:
               chr18:52433929-52433597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               63, 14
               

               Conread position:
               304-639
               

               Cow position:
               chr18:52447803-52447470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-578
               

               Cow position:
               chr18:42744443-42744714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               58, 9
               

               Conread position:
               305-587
               

               Cow position:
               chr18:14453014-14453294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               212, 9
               

               Conread position:
               305-594
               

               Cow position:
               chr18:43048454-43048741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               69, 9
               

               Conread position:
               305-599
               

               Cow position:
               chr18:40324022-40324314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               305-599
               

               Cow position:
               chr18:42984614-42984906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-599
               

               Cow position:
               chr18:42985034-42985326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               68, 9
               

               Conread position:
               305-600
               

               Cow position:
               chr18:33092748-33093041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               62, 9
               

               Conread position:
               305-600
               

               Cow position:
               chr18:42837662-42837955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-601
               

               Cow position:
               chr18:42675047-42675341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               22, 13
               

               Conread position:
               305-601
               

               Cow position:
               chr18:43119461-43119755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               36, 9
               

               Conread position:
               305-602
               

               Cow position:
               chr18:51367908-51368203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               305-634
               

               Cow position:
               chr18:42984698-42985026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               308, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:41948570-41948901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:41948822-41949153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               220
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               176, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:42674627-42674958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               220
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               22, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:42674963-42675294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:42837494-42837825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               65, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:42959941-42960272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               323, 21
               

               Conread position:
               305-638
               

               Cow position:
               chr18:42985118-42985449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               140, 14
               

               Conread position:
               305-638
               

               Cow position:
               chr18:43022461-43022792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               73, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:43119545-43119876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               320, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:43119965-43120296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:43175082-43175413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:43175166-43175497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:44184276-44184607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               231, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:44240451-44240120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:44397577-44397908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:44397661-44397992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               225
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               174, 9
               

               Conread position:
               305-638
               

               Cow position:
               chr18:44397913-44398244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               217
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:44397997-44398328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               220
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               305-638
               

               Cow position:
               chr18:53586389-53586720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               44, 12
               

               Conread position:
               305-638
               

               Cow position:
               chr18:53634931-53635261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               237, 12
               

               Conread position:
               305-638
               

               Cow position:
               chr18:54993178-54992847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               58, 24
               

               Conread position:
               305-638
               

               Cow position:
               chr18:55018238-55017907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               214
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               305-639
               

               Cow position:
               chr18:55066416-55066748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               58, 22
               

               Conread position:
               306-638
               

               Cow position:
               chr18:52428998-52428668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               306-638
               

               Cow position:
               chr18:52434179-52433849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               307-638
               

               Cow position:
               chr18:50100342-50100010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               307-638
               

               Cow position:
               chr18:51400722-51400391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               308-599
               

               Cow position:
               chr18:40075210-40074921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               71, 9
               

               Conread position:
               308-600
               

               Cow position:
               chr18:44253046-44253335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               308-601
               

               Cow position:
               chr18:42791235-42790944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               308-638
               

               Cow position:
               chr18:1418441-1418113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               140, 11
               

               Conread position:
               308-638
               

               Cow position:
               chr18:22634995-22634667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               308-638
               

               Cow position:
               chr18:42791739-42791411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               61, 9
               

               Conread position:
               308-638
               

               Cow position:
               chr18:50058680-50059008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               308-638
               

               Cow position:
               chr18:50848522-50848194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               205, 19
               

               Conread position:
               308-638
               

               Cow position:
               chr18:51751728-51752056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               308-638
               

               Cow position:
               chr18:54980251-54979923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 9
               

               Conread position:
               308-638
               

               Cow position:
               chr18:56494451-56494123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               212
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               209, 9
               

               Conread position:
               312-600
               

               Cow position:
               chr18:54993088-54992801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 18
               

               Conread position:
               312-638
               

               Cow position:
               chr18:50083635-50083309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               312-638
               

               Cow position:
               chr18:50246766-50246440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               224
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               15, 20
               

               Conread position:
               312-638
               

               Cow position:
               chr18:56329078-56329404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               38, 42
               

               Conread position:
               313-632
               

               Cow position:
               chr18:50058433-50058750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               313-637
               

               Cow position:
               chr18:50295540-50295216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               168, 172
               

               Conread position:
               313-638
               

               Cow position:
               chr18:50059271-50059596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               14, 19
               

               Conread position:
               314-533
               

               Cow position:
               chr18:50099158-50098939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               184, 167
               

               Conread position:
               314-564
               

               Cow position:
               chr18:55066843-55067093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               212, 217
               

               Conread position:
               314-587
               

               Cow position:
               chr18:53509925-53509652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               314-599
               

               Cow position:
               chr18:42743862-42744147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               49, 60
               

               Conread position:
               314-599
               

               Cow position:
               chr18:53560193-53559908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               236, 214
               

               Conread position:
               314-599
               

               Cow position:
               chr18:53586816-53587104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               7, 18
               

               Conread position:
               314-601
               

               Cow position:
               chr18:52447627-52447340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               111, 117
               

               Conread position:
               314-602
               

               Cow position:
               chr18:54968221-54967935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               314-614
               

               Cow position:
               chr18:42674466-42674766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-636
               

               Cow position:
               chr18:42791903-42791581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               314-638
               

               Cow position:
               chr18:42791399-42791075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               203, 227
               

               Conread position:
               314-638
               

               Cow position:
               chr18:42791483-42791159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               287, 307
               

               Conread position:
               314-638
               

               Cow position:
               chr18:43022216-43022540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               64, 53
               

               Conread position:
               314-638
               

               Cow position:
               chr18:43093235-43093559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr18:43093319-43093643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               314-638
               

               Cow position:
               chr18:43168227-43167903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               314-638
               

               Cow position:
               chr18:49033031-49033355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr18:50048704-50049028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               13, 21
               

               Conread position:
               314-638
               

               Cow position:
               chr18:50059020-50059344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               314-638
               

               Cow position:
               chr18:50083801-50083477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               218
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               298, 289
               

               Conread position:
               314-638
               

               Cow position:
               chr18:50099578-50099254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               314-638
               

               Cow position:
               chr18:50099914-50099590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               217, 209
               

               Conread position:
               314-638
               

               Cow position:
               chr18:50272064-50271740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               226
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               314-638
               

               Cow position:
               chr18:50849442-50849118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr18:51789122-51789446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               314-638
               

               Cow position:
               chr18:51789458-51789782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               159, 164
               

               Conread position:
               314-638
               

               Cow position:
               chr18:51812533-51812857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               255, 262
               

               Conread position:
               314-638
               

               Cow position:
               chr18:51969690-51969368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               205
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               36, 42
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52427984-52427660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52428068-52427744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               199
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52428236-52427912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               209
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               132, 142
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52428320-52427996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52428488-52428164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52428572-52428248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52428656-52428332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52433417-52433093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52433501-52433177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52433669-52433345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               132, 142
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52433753-52433429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52433837-52433513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:52448131-52447807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               211
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-638
               

               Cow position:
               chr18:53586144-53586468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               49, 59
               

               Conread position:
               314-638
               

               Cow position:
               chr18:54980415-54980091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               205
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               56, 60
               

               Conread position:
               314-638
               

               Cow position:
               chr18:54993759-54993435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               205
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               314-638
               

               Cow position:
               chr18:54993843-54993519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               203, 209
               

               Conread position:
               314-638
               

               Cow position:
               chr18:55523659-55523335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               314-638
               

               Cow position:
               chr18:55523827-55523503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               7, 17
               

               Conread position:
               314-638
               

               Cow position:
               chr18:56129060-56128736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-639
               

               Cow position:
               chr18:43168311-43167986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               232, 239
               

               Conread position:
               314-639
               

               Cow position:
               chr18:50251518-50251193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               74, 106
               

               Conread position:
               314-639
               

               Cow position:
               chr18:52447963-52447638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-533
               

               Cow position:
               chr18:50059441-50059659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-563
               

               Cow position:
               chr18:40324618-40324866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-596
               

               Cow position:
               chr18:50058601-50058882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-598
               

               Cow position:
               chr18:14453754-14454037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-599
               

               Cow position:
               chr18:43168058-43167774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-599
               

               Cow position:
               chr18:54980580-54980298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               315-599
               

               Cow position:
               chr18:54993924-54993642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               53, 10
               

               Conread position:
               315-599
               

               Cow position:
               chr18:55018146-55017862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               315-600
               

               Cow position:
               chr18:1418520-1418235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-600
               

               Cow position:
               chr18:42959454-42959739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-600
               

               Cow position:
               chr18:43022805-43023090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-600
               

               Cow position:
               chr18:44240275-44239990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               226, 211
               

               Conread position:
               315-600
               

               Cow position:
               chr18:54967553-54967268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-600
               

               Cow position:
               chr18:54979826-54979541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-600
               

               Cow position:
               chr18:55009077-55008792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               315-600
               

               Cow position:
               chr18:56247894-56248176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               315-601
               

               Cow position:
               chr18:40086248-40086534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-601
               

               Cow position:
               chr18:42837418-42837704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               55, 59
               

               Conread position:
               315-636
               

               Cow position:
               chr18:53610117-53610438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               40, 34
               

               Conread position:
               315-638
               

               Cow position:
               chr18:33064168-33064491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               58, 34
               

               Conread position:
               315-638
               

               Cow position:
               chr18:33064504-33064827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               119, 131
               

               Conread position:
               315-638
               

               Cow position:
               chr18:33092672-33092995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               315-638
               

               Cow position:
               chr18:40075541-40075218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               127, 134
               

               Conread position:
               315-638
               

               Cow position:
               chr18:40306771-40306448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               203
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:40307107-40306784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 98
               

               Conread position:
               315-638
               

               Cow position:
               chr18:40324450-40324773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               201
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:41197925-41197602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:41948410-41948733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:41948494-41948817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42674803-42675126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42744115-42744438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42744199-42744522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42792406-42792083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42792658-42792335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               219
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42837166-42837489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42984790-42985113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:42984874-42985197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               45, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:43022721-43023044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               200
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:43048378-43048701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               301, 308
               

               Conread position:
               315-638
               

               Cow position:
               chr18:43093728-43094050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               301, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:43168142-43167819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               214
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:43174670-43174993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               213
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:43174838-43175161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:43175258-43175581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:44154101-44154427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               207
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:44184200-44184523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:44240359-44240036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               146, 132
               

               Conread position:
               315-638
               

               Cow position:
               chr18:44240527-44240204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               208
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               315-638
               

               Cow position:
               chr18:44240695-44240372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               69, 43
               

               Conread position:
               315-638
               

               Cow position:
               chr18:44253541-44253864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:49023164-49022841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               39, 34
               

               Conread position:
               315-638
               

               Cow position:
               chr18:49032276-49032599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               116, 106
               

               Conread position:
               315-638
               

               Cow position:
               chr18:49032780-49033103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50021798-50022124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50030633-50030955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               130, 203
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50048453-50048776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               215
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               301, 308
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50048621-50048944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               302, 308
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50059189-50059512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50083716-50083393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               219
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               136, 143
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50099325-50099002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               137, 141
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50099661-50099338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50100165-50099842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               287, 302
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50246175-50245852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               131, 141
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50246511-50246188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50246679-50246356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               12, 20
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50848685-50848362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50848769-50848446 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               215
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50848853-50848530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50849273-50848950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               166, 170
               

               Conread position:
               315-638
               

               Cow position:
               chr18:50849357-50849034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53498658-53498338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53509588-53509265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53509756-53509433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               26, 31
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53526042-53525719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53560276-53559953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               212, 216
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53560528-53560205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               300, 295
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53560612-53560289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53586313-53586636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               56, 68
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53586565-53586888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               6, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53635190-53635513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:53635274-53635597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:54967217-54966894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:54967385-54967062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               315-638
               

               Cow position:
               chr18:54967718-54967398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               70, 31
               

               Conread position:
               315-638
               

               Cow position:
               chr18:54993254-54992931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               205
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               315-638
               

               Cow position:
               chr18:54993422-54993099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               56, 67
               

               Conread position:
               315-638
               

               Cow position:
               chr18:54993590-54993267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:55018482-55018159 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               315-638
               

               Cow position:
               chr18:55066676-55066999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               315-638
               

               Cow position:
               chr18:55523910-55523587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               213, 232
               

               Conread position:
               315-638
               

               Cow position:
               chr18:56128975-56128652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               128, 140
               

               Conread position:
               315-638
               

               Cow position:
               chr18:56328913-56329236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-638
               

               Cow position:
               chr18:56329165-56329488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               315-638
               

               Cow position:
               chr18:56494278-56493955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               315-639
               

               Cow position:
               chr18:41198093-41197769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               196, 200
               

               Conread position:
               315-639
               

               Cow position:
               chr18:42792742-42792418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               220
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               12, 17
               

               Conread position:
               315-639
               

               Cow position:
               chr18:54967301-54966977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-495
               

               Cow position:
               chr18:40324703-40324882 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-593
               

               Cow position:
               chr18:51765817-51766093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               264, 0
               

               Conread position:
               316-594
               

               Cow position:
               chr18:52447205-52446927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               140, 136
               

               Conread position:
               316-599
               

               Cow position:
               chr18:49022995-49022712 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               163, 159
               

               Conread position:
               316-599
               

               Cow position:
               chr18:51368253-51368536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               316-600
               

               Cow position:
               chr18:42693028-42693311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               188
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               316-600
               

               Cow position:
               chr18:51367833-51368117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               34, 38
               

               Conread position:
               316-614
               

               Cow position:
               chr18:51788872-51789170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-614
               

               Cow position:
               chr18:51812115-51812413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               232, 228
               

               Conread position:
               316-632
               

               Cow position:
               chr18:51400881-51400565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-636
               

               Cow position:
               chr18:50048874-50049198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               316-637
               

               Cow position:
               chr18:51367750-51368070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               316-638
               

               Cow position:
               chr18:40075372-40075050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               216, 222
               

               Conread position:
               316-638
               

               Cow position:
               chr18:44240610-44240288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-638
               

               Cow position:
               chr18:50246426-50246104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               316-638
               

               Cow position:
               chr18:50271810-50271488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               135, 141
               

               Conread position:
               316-638
               

               Cow position:
               chr18:50282023-50281701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               316-638
               

               Cow position:
               chr18:50849020-50848698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-638
               

               Cow position:
               chr18:51401049-51400727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-638
               

               Cow position:
               chr18:51751650-51751972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               48, 75
               

               Conread position:
               316-638
               

               Cow position:
               chr18:51751902-51752224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               316-638
               

               Cow position:
               chr18:51765061-51765383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               34, 39
               

               Conread position:
               316-638
               

               Cow position:
               chr18:51789292-51789614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               221
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               147, 139
               

               Conread position:
               316-638
               

               Cow position:
               chr18:51812031-51812353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               217
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               11, 16
               

               Conread position:
               316-638
               

               Cow position:
               chr18:51838960-51839282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               317-600
               

               Cow position:
               chr18:50100247-50099964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               10, 15
               

               Conread position:
               317-609
               

               Cow position:
               chr18:55524244-55523952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               140, 127
               

               Conread position:
               317-638
               

               Cow position:
               chr18:42791648-42791327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 297
               

               Conread position:
               317-638
               

               Cow position:
               chr18:44253375-44253696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               208
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               60, 45
               

               Conread position:
               317-640
               

               Cow position:
               chr18:50271893-50271570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               221
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               304, 291
               

               Conread position:
               318-638
               

               Cow position:
               chr18:42674387-42674706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               318-638
               

               Cow position:
               chr18:44184538-44184859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               11, 57
               

               Conread position:
               319-557
               

               Cow position:
               chr18:55075350-55075112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               42, 10
               

               Conread position:
               319-593
               

               Cow position:
               chr18:53498737-53498465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               319-599
               

               Cow position:
               chr18:54968383-54968104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               48, 11
               

               Conread position:
               319-599
               

               Cow position:
               chr18:55018561-55018282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 11
               

               Conread position:
               319-638
               

               Cow position:
               chr18:41948330-41948649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               203
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               319-638
               

               Cow position:
               chr18:54992997-54992679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               301, 11
               

               Conread position:
               319-638
               

               Cow position:
               chr18:55009156-55008838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               200
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               319-638
               

               Cow position:
               chr18:56434222-56433914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               50, 12
               

               Conread position:
               320-638
               

               Cow position:
               chr18:43021971-43022288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               206
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               321-638
               

               Cow position:
               chr18:42743784-42744102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 54
               

               Conread position:
               322-587
               

               Cow position:
               chr18:51788962-51789227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-592
               

               Cow position:
               chr18:50083541-50083271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               255, 265
               

               Conread position:
               322-593
               

               Cow position:
               chr18:51873959-51873689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               261, 0
               

               Conread position:
               322-597
               

               Cow position:
               chr18:42960040-42960315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               322-599
               

               Cow position:
               chr18:40086423-40086703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 52
               

               Conread position:
               322-599
               

               Cow position:
               chr18:51812205-51812482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-600
               

               Cow position:
               chr18:33064343-33064621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               45, 52
               

               Conread position:
               322-600
               

               Cow position:
               chr18:44240772-44240494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-600
               

               Cow position:
               chr18:50058860-50059138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-601
               

               Cow position:
               chr18:42675146-42675425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-617
               

               Cow position:
               chr18:50271720-50271425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               202
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               132, 120
               

               Conread position:
               322-632
               

               Cow position:
               chr18:42674894-42675204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               216
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-632
               

               Cow position:
               chr18:50059364-50059674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               215
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-634
               

               Cow position:
               chr18:50030724-50031035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               200
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               39, 138
               

               Conread position:
               322-638
               

               Cow position:
               chr18:1418345-1418029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 179
               

               Conread position:
               322-638
               

               Cow position:
               chr18:14452861-14453177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               322-638
               

               Cow position:
               chr18:14452944-14453261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               223
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               7, 216
               

               Conread position:
               322-638
               

               Cow position:
               chr18:33063671-33063987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               134, 119
               

               Conread position:
               322-638
               

               Cow position:
               chr18:33063755-33064071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               118, 133
               

               Conread position:
               322-638
               

               Cow position:
               chr18:33064091-33064407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               32, 27
               

               Conread position:
               322-638
               

               Cow position:
               chr18:40085761-40086069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               322-638
               

               Cow position:
               chr18:40306596-40306280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:40306848-40306532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               207
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               322-638
               

               Cow position:
               chr18:40323953-40324269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               322-638
               

               Cow position:
               chr18:40324291-40324605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               41, 7
               

               Conread position:
               322-638
               

               Cow position:
               chr18:40324373-40324689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               209
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:40324540-40324857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               322-638
               

               Cow position:
               chr18:41198506-41198190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               225
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:41198758-41198442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               212
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:41949005-41949321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               58, 48
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42674558-42674874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               41, 51
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42693369-42693685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               48, 52
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42791559-42791243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               212
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               34, 30
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42792315-42791999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42792567-42792251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               216
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               45, 52
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42837341-42837657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               41, 52
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42959788-42960104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:42984545-42984861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:43174593-43174909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 73
               

               Conread position:
               322-638
               

               Cow position:
               chr18:44153695-44154004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               195, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:50058944-50059260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               5, 10
               

               Conread position:
               322-638
               

               Cow position:
               chr18:50099738-50099422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               122, 136
               

               Conread position:
               322-638
               

               Cow position:
               chr18:50251258-50250946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 36
               

               Conread position:
               322-638
               

               Cow position:
               chr18:50272140-50271824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               216
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               322-638
               

               Cow position:
               chr18:50295867-50295551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               199
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               172, 164
               

               Conread position:
               322-638
               

               Cow position:
               chr18:50849098-50848782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 31
               
322-638UCSC Genome Browser
               Conread position:
               
               

               Cow position:
               chr18:51367252-51367568 (view  custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 52
               
322-638UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chr18:51400959-51400643 (view  custom track)

               
               
               
Alignm length: 318

               
               
               
Alignm identity: 202

               
               
               
Alignm E-value: 8e-30

               
               
               
Alignm gaps (pig, cow): 200, 195
322-638UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chr18:51812457-51812773 (view  custom track)

               
               
               
Alignm length: 317

               
               
               
Alignm identity: 213

               
               
               
Alignm E-value: 1.00053e-42

               
               
               
Alignm gaps (pig, cow): 0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr18:51839134-51839450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr18:51969600-51969288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:198
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):209, 214

               
               
               Conread position:322-638
               
               
               Cow position:chr18:52447283-52446967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:196
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):210, 218

               
               
               Conread position:322-638
               
               
               Cow position:chr18:53635617-53635933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr18:56247392-56247702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:203
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):227, 27

               
               
               Conread position:322-638
               
               
               Cow position:chr18:56316644-56316328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:205
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr18:56316728-56316412 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:194
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):189, 193

               
               
               Conread position:322-638
               
               
               Cow position:chr18:56329004-56329320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr18:56329340-56329656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr18:56329676-56329992 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):130, 123

               
               
               Conread position:322-639
               
               
               Cow position:chr18:50084129-50083812 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:216
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:322-639
               
               
               Cow position:chr18:50271972-50271655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:219
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:322-640
               
               
               Cow position:chr18:50021973-50022294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):100, 0

               
               
               Conread position:323-600
               
               
               Cow position:chr18:50246251-50245974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):45, 50

               
               
               Conread position:323-636
               
               
               Cow position:chr18:42791306-42790993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:323-638
               
               
               Cow position:chr18:44183956-44184271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):290, 299

               
               
               Conread position:323-638
               
               
               Cow position:chr18:50030470-50030789 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):130, 293

               
               
               Conread position:323-638
               
               
               Cow position:chr18:50048545-50048860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:211
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):27, 31

               
               
               Conread position:323-638
               
               
               Cow position:chr18:50084044-50083729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:215
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:323-638
               
               
               Cow position:chr18:50282100-50281785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):108, 98

               
               
               Conread position:323-638
               
               
               Cow position:chr18:50849181-50848866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:323-638
               
               
               Cow position:chr18:54968465-54968149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:200
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):6, 225

               
               
               Conread position:323-638
               
               
               Cow position:chr18:56247143-56247454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:210
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):233, 0

               
               
               Conread position:324-602
               
               
               Cow position:chr18:22634814-22634537 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):11, 45

               
               
               Conread position:324-638
               
               
               Cow position:chr18:44397510-44397824 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:202
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:324-638
               
               
               Cow position:chr18:51401125-51400811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:202
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:324-638
               
               
               Cow position:chr18:53585985-53586300 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):5, 54

               
               
               Conread position:325-638
               
               
               Cow position:chr18:50295611-50295299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:206
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):259, 5

               
               
               Conread position:326-578
               
               
               Cow position:chr18:42827658-42827407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:326-638
               
               
               Cow position:chr18:53635033-53635345 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:328-599
               
               
               Cow position:chr18:55524149-55523878 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):43, 30

               
               
               Conread position:328-601
               
               
               Cow position:chr18:40075696-40075423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):189, 195

               
               
               Conread position:328-638
               
               
               Cow position:chr18:54993994-54993687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:197
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:329-638
               
               
               Cow position:chr18:55009231-55008922 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):290, 294

               
               
               Conread position:330-600
               
               
               Cow position:chr18:53498811-53498541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:172
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):33, 53

               
               
               Conread position:330-632
               
               
               Cow position:chr18:51367344-51367646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:330-638
               
               
               Cow position:chr18:51765579-51765887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:330-638
               
               
               Cow position:chr18:51788802-51789110 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):143, 148

               
               
               Conread position:330-638
               
               
               Cow position:chr18:53560345-53560037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):284, 271

               
               
               Conread position:330-638
               
               
               Cow position:chr18:53560681-53560373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:209
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):19, 26

               
               
               Conread position:330-638
               
               
               Cow position:chr18:55009397-55009090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):10, 65

               
               
               Conread position:332-638
               
               
               Cow position:chr18:53498302-53497999 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):101, 116

               
               
               Conread position:333-601
               
               
               Cow position:chr18:44154035-44154303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:172
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):28, 41

               
               
               Conread position:333-638
               
               
               Cow position:chr18:41948680-41948985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr18:41948932-41949237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:209
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):30, 41

               
               
               Conread position:333-638
               
               
               Cow position:chr18:42827820-42827515 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:210
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr18:42984472-42984777 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr18:43022319-43022624 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):30, 41

               
               
               Conread position:333-638
               
               
               Cow position:chr18:43022655-43022960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):197, 212

               
               
               Conread position:333-638
               
               
               Cow position:chr18:43092752-43093055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):17, 26

               
               
               Conread position:333-638
               
               
               Cow position:chr18:43092834-43093139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:213
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):271, 285

               
               
               Conread position:333-638
               
               
               Cow position:chr18:44240845-44240540 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:191
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr18:50022071-50022376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):209, 198

               
               
               Conread position:333-638
               
               
               Cow position:chr18:50058369-50058672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:204
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):138, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr18:50058535-50058840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr18:50295772-50295467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr18:55018801-55018495 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):74, 0

               
               
               Conread position:333-640
               
               
               Cow position:chr18:14453520-14453827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:191
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-594
               
               
               Cow position:chr18:40307340-40307080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:168
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):103, 112

               
               
               Conread position:334-599
               
               
               Cow position:chr18:55523975-55523710 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):29, 49

               
               
               Conread position:334-600
               
               
               Cow position:chr18:51765499-51765765 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):44, 38

               
               
               Conread position:334-600
               
               
               Cow position:chr18:53560425-53560159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-602
               
               
               Cow position:chr18:55008974-55008706 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):33, 40

               
               
               Conread position:334-632
               
               
               Cow position:chr18:54979975-54979677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:190
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):34, 39

               
               
               Conread position:334-632
               
               
               Cow position:chr18:55018295-55017997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:203
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):34, 40

               
               
               Conread position:334-638
               
               
               Cow position:chr18:42792471-42792167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:210
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):147, 151

               
               
               Conread position:334-638
               
               
               Cow position:chr18:42792891-42792587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:204
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr18:42827735-42827431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:203
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr18:43168543-43168239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:209
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr18:44184135-44184439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:195
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):108, 120

               
               
               Conread position:334-638
               
               
               Cow position:chr18:49032127-49032431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):118, 111

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50021394-50021698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):285, 296

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50022156-50022463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:195
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):246, 231

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50048388-50048692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):30, 39

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50084201-50083897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:209
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):285, 278

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50099390-50099086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:203
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):30, 39

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50246828-50246524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:208
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50282341-50282037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50848582-50848278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:206
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):217, 210

               
               
               Conread position:334-638
               
               
               Cow position:chr18:50848918-50848614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:210
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):149, 139

               
               
               Conread position:334-638
               
               
               Cow position:chr18:51839062-51839366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):214, 210

               
               
               Conread position:334-638
               
               
               Cow position:chr18:53560761-53560457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:203
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):110, 121

               
               
               Conread position:334-638
               
               
               Cow position:chr18:53586500-53586804 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:200
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):24, 40

               
               
               Conread position:334-638
               
               
               Cow position:chr18:53586668-53586972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):198, 204

               
               
               Conread position:334-638
               
               
               Cow position:chr18:53609884-53610188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr18:54967618-54967314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):33, 40

               
               
               Conread position:334-638
               
               
               Cow position:chr18:54980143-54979839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):33, 40

               
               
               Conread position:334-638
               
               
               Cow position:chr18:54980646-54980343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):52, 85

               
               
               Conread position:334-638
               
               
               Cow position:chr18:54993487-54993183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):33, 40

               
               
               Conread position:334-638
               
               
               Cow position:chr18:55066527-55066831 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:200
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):29, 45

               
               
               Conread position:334-638
               
               
               Cow position:chr18:55066779-55067083 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):204, 183

               
               
               Conread position:334-638
               
               
               Cow position:chr18:56494175-56493871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):183, 190

               
               
               Conread position:334-638
               
               
               Cow position:chr18:56494343-56494039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:336-638
               
               
               Cow position:chr18:50021734-50022037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:198
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):9, 200

               
               
               Conread position:338-617
               
               
               Cow position:chr18:50281917-50281638 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:185
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):114, 119

               
               
               Conread position:338-638
               
               
               Cow position:chr18:42792803-42792503 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:198
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:338-638
               
               
               Cow position:chr18:50048812-50049112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:203
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):119, 103

               
               
               Conread position:338-638
               
               
               Cow position:chr18:53560001-53559701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):273, 286

               
               
               Conread position:338-638
               
               
               Cow position:chr18:55524307-55524007 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):212, 188

               
               
               Conread position:338-638
               
               
               Cow position:chr18:56494506-56494207 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:340-638
               
               
               Cow position:chr18:53509983-53509685 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):155, 149

               
               
               Conread position:341-637
               
               
               Cow position:chr18:1418158-1417862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):201, 196

               
               
               Conread position:341-638
               
               
               Cow position:chr18:42693472-42693769 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:207
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):42, 27

               
               
               Conread position:341-638
               
               
               Cow position:chr18:42693556-42693853 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:341-638
               
               
               Cow position:chr18:50058795-50059092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:203
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:341-638
               
               
               Cow position:chr18:50246569-50246272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:198
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):115, 103

               
               
               Conread position:341-638
               
               
               Cow position:chr18:53498887-53498587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):59, 199

               
               
               Conread position:341-639
               
               
               Cow position:chr18:52448357-52448058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):70, 116

               
               
               Conread position:343-638
               
               
               Cow position:chr18:50295678-50295383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:201
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:345-638
               
               
               Cow position:chr18:50849495-50849202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:198
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):39, 28

               
               
               Conread position:346-600
               
               
               Cow position:chr18:42692894-42693144 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):137, 27

               
               
               Conread position:346-630
               
               
               Cow position:chr18:42693645-42693929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:180
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):38, 27

               
               
               Conread position:353-638
               
               
               Cow position:chr18:53560822-53560541 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):18, 26

               
               
               Conread position:353-638
               
               
               Cow position:chr18:53635564-53635849 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):249, 261

               
               
               Conread position:358-638
               
               
               Cow position:chr18:53526503-53526223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):17, 72

               
               
               Conread position:360-639
               
               
               Cow position:chr18:50099447-50099169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:202
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):94, 13

               
               
               Conread position:363-638
               
               
               Cow position:chr18:53509623-53509349 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):91, 9

               
               
               Conread position:366-638
               
               
               Cow position:chr18:54968002-54967731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):166, 7

               
               
               Conread position:367-638
               
               
               Cow position:chr18:40306467-40306196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:367-638
               
               
               Cow position:chr18:50084252-50083981 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:193
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:371-638
               
               
               Cow position:chr18:50295901-50295635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):160, 34

               
               
               Conread position:372-602
               
               
               Cow position:chr18:54967412-54967182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:372-636
               
               
               Cow position:chr18:50251127-50250871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):73, 85

               
               
               Conread position:372-638
               
               
               Cow position:chr18:33063637-33063903 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):68, 83

               
               
               Conread position:372-638
               
               
               Cow position:chr18:33092561-33092827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):156, 146

               
               
               Conread position:372-638
               
               
               Cow position:chr18:50099772-50099506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):84, 70

               
               
               Conread position:372-638
               
               
               Cow position:chr18:53610090-53610356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:168
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:372-638
               
               
               Cow position:chr18:55075382-55075115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):103, 154

               
               
               Conread position:372-638
               
               
               Cow position:chr18:56247110-56247374 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:372-638
               
               
               Cow position:chr18:56329894-56330160 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:373-587
               
               
               Cow position:chr18:54993616-54993402 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:373-599
               
               
               Cow position:chr18:51764949-51765176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:229
               
               
               Alignm identity:149
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):6, 163

               
               
               Conread position:373-599
               
               
               Cow position:chr18:51970042-51969816 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):68, 56

               
               
               Conread position:373-599
               
               
               Cow position:chr18:56434589-56434363 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):83, 71

               
               
               Conread position:373-618
               
               
               Cow position:chr18:42693335-42693581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:166
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):13, 117

               
               
               Conread position:373-638
               
               
               Cow position:chr18:14453644-14453909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):159, 166

               
               
               Conread position:373-638
               
               
               Cow position:chr18:33064310-33064575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:178
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):176, 162

               
               
               Conread position:373-638
               
               
               Cow position:chr18:40085643-40085909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):106, 0

               
               
               Conread position:373-638
               
               
               Cow position:chr18:40086222-40086487 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:373-638
               
               
               Cow position:chr18:40306881-40306616 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:180
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):237, 241

               
               
               Conread position:373-638
               
               
               Cow position:chr18:40306965-40306700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):144, 157

               
               
               Conread position:373-638
               
               
               Cow position:chr18:40323920-40324185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):5, 30

               
               
               Conread position:373-638
               
               
               Cow position:chr18:43175400-43175656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):189, 0

               
               
               Conread position:373-638
               
               
               Cow position:chr18:53526152-53525887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):86, 69

               
               
               Conread position:373-638
               
               
               Cow position:chr18:53526405-53526139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:175
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):6, 117

               
               
               Conread position:373-638
               
               
               Cow position:chr18:54980272-54980007 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):159, 166

               
               
               Conread position:373-638
               
               
               Cow position:chr18:55008851-55008586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:172
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):79, 89

               
               
               Conread position:373-638
               
               
               Cow position:chr18:55018592-55018327 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):158, 144

               
               
               Conread position:373-638
               
               
               Cow position:chr18:56434673-56434408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:167
               
               
               Alignm E-value:1e-20
               
               
               Alignm gaps (pig, cow):140, 132

               
               
               Conread position:374-638
               
               
               Cow position:chr18:22635183-22634919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):158, 143

               
               
               Conread position:374-638
               
               
               Cow position:chr18:56434093-56433827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):156, 79

               
               
               Conread position:375-638
               
               
               Cow position:chr18:54979850-54979587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:172
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:377-638
               
               
               Cow position:chr18:43048357-43048617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):96, 7

               
               
               Conread position:378-638
               
               
               Cow position:chr18:40075394-40075134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):237, 243

               
               
               Conread position:378-638
               
               
               Cow position:chr18:55018671-55018411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:166
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):232, 244

               
               
               Conread position:379-633
               
               
               Cow position:chr18:50251537-50251282 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):76, 60

               
               
               Conread position:382-638
               
               
               Cow position:chr18:14453737-14453993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):237, 243

               
               
               Conread position:382-638
               
               
               Cow position:chr18:50272163-50271908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:383-638
               
               
               Cow position:chr18:50021361-50021614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:163
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):19, 0

               
               
               Conread position:383-638
               
               
               Cow position:chr18:56494543-56494291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:173
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):27, 0

               
               
               Conread position:386-638
               
               
               Cow position:chr18:41198780-41198526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:165
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):8, 0

               
               
               Conread position:387-638
               
               
               Cow position:chr18:51838779-51839030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:137
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):135, 130

               
               
               Conread position:393-638
               
               
               Cow position:chr18:55066334-55066579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:162
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):140, 155

               
               
               Conread position:396-638
               
               
               Cow position:chr18:44183945-44184187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:157
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):83, 77

               
               
               Conread position:398-634
               
               
               Cow position:chr18:43053192-43053428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:152
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:398-638
               
               
               Cow position:chr18:43174501-43174741 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:155
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):158, 163

               
               
               Conread position:400-638
               
               
               Cow position:chr18:14452855-14453093 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:167
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:404-638
               
               
               Cow position:chr18:50084302-50084065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:163
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:404-638
               
               
               Cow position:chr18:50282355-50282121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:156
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:406-638
               
               
               Cow position:chr18:40075702-40075470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):88, 83

               
               
               Conread position:407-638
               
               
               Cow position:chr18:43168554-43168323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:156
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:407-638
               
               
               Cow position:chr18:50246839-50246608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:408-638
               
               
               Cow position:chr18:42837091-42837321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:232
               
               
               Alignm identity:156
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):17, 23

               
               
               Conread position:412-638
               
               
               Cow position:chr18:56328842-56329068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:148
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:188-638
               
               
               Cow position:chr19:14940456-14940015 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:285
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):337, 18

               
               
               Conread position:190-499
               
               
               Cow position:chr19:14960177-14960477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):173, 15

               
               
               Conread position:205-638
               
               
               Cow position:chr19:20678403-20677978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:264
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):308, 91

               
               
               Conread position:206-627
               
               
               Cow position:chr19:14940355-14939942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:426
               
               
               Alignm identity:265
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):16, 33

               
               
               Conread position:206-638
               
               
               Cow position:chr19:23614303-23613879 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:278
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):74, 66

               
               
               Conread position:241-638
               
               
               Cow position:chr19:23597529-23597140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:401
               
               
               Alignm identity:250
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):86, 56

               
               
               Conread position:256-638
               
               
               Cow position:chr19:23613833-23613459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:241
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:259-638
               
               
               Cow position:chr19:20635235-20635606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:242
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:265-599
               
               
               Cow position:chr19:14948159-14948484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:208
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:277-638
               
               
               Cow position:chr19:14940885-14940519 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:241
               
               
               Alignm E-value:8.99998e-41
               
               
               Alignm gaps (pig, cow):24, 0

               
               
               Conread position:304-638
               
               
               Cow position:chr19:14960118-14960448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:224
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):228, 10

               
               
               Conread position:304-638
               
               
               Cow position:chr19:20678142-20677810 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:217
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr19:14940598-14940267 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:228
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr19:14940934-14940603 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:215
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):206, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr19:14959379-14959708 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:212
               
               
               Alignm E-value:7e-28
               
               
               Alignm gaps (pig, cow):226, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr19:20635023-20635354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:221
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):58, 14

               
               
               Conread position:305-638
               
               
               Cow position:chr19:20678393-20678062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):62, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr19:23649828-23649497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:218
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:305-640
               
               
               Cow position:chr19:43569950-43570280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:223
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):60, 12

               
               
               Conread position:306-638
               
               
               Cow position:chr19:20678730-20678398 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:216
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):57, 68

               
               
               Conread position:306-638
               
               
               Cow position:chr19:23614967-23614635 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:219
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):69, 62

               
               
               Conread position:306-639
               
               
               Cow position:chr19:23614130-23613794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:226
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:312-636
               
               
               Cow position:chr19:14959871-14960194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:214
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):17, 285

               
               
               Conread position:312-638
               
               
               Cow position:chr19:23597634-23597308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-530
               
               
               Cow position:chr19:23613531-23613315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:146
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):182, 199

               
               
               Conread position:314-638
               
               
               Cow position:chr19:20635114-20635438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):49, 60

               
               
               Conread position:314-638
               
               
               Cow position:chr19:20677966-20677642 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23613699-23613375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:211
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23613867-23613543 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):117, 111

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23614371-23614047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:218
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23614623-23614299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:215
               
               
               Alignm E-value:8.99998e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23614791-23614467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:210
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23615043-23614719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:211
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):49, 59

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23649989-23649665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:207
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):156, 147

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23650073-23649749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):240, 231

               
               
               Conread position:314-638
               
               
               Cow position:chr19:23650325-23650001 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:203
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-636
               
               
               Cow position:chr19:14958982-14959297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):136, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr19:14940758-14940435 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:213
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):48, 59

               
               
               Conread position:315-638
               
               
               Cow position:chr19:14941010-14940687 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:209
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):293, 286

               
               
               Conread position:315-638
               
               
               Cow position:chr19:23650408-23650085 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-639
               
               
               Cow position:chr19:43569790-43570114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):216, 222

               
               
               Conread position:316-638
               
               
               Cow position:chr19:23649735-23649413 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:317-623
               
               
               Cow position:chr19:14958817-14959122 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):35, 5

               
               
               Conread position:317-638
               
               
               Cow position:chr19:14948119-14948439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:203
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):284, 0

               
               
               Conread position:322-632
               
               
               Cow position:chr19:23597373-23597062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):7, 203

               
               
               Conread position:322-638
               
               
               Cow position:chr19:14940500-14940183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr19:14940667-14940351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr19:20678546-20678230 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:205
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):213, 223

               
               
               Conread position:322-638
               
               
               Cow position:chr19:23597540-23597224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:209
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr19:23614699-23614383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):41, 51

               
               
               Conread position:322-638
               
               
               Cow position:chr19:23649897-23649581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr19:23650233-23649917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:196
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):293, 288

               
               
               Conread position:322-639
               
               
               Cow position:chr19:43569715-43570030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:210
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):293, 19

               
               
               Conread position:323-638
               
               
               Cow position:chr19:14948040-14948356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:209
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):6, 51

               
               
               Conread position:333-638
               
               
               Cow position:chr19:23615108-23614803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):30, 41

               
               
               Conread position:334-634
               
               
               Cow position:chr19:23650137-23649837 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr19:23597696-23597392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):46, 39

               
               
               Conread position:334-638
               
               
               Cow position:chr19:23614435-23614131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:202
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):28, 40

               
               
               Conread position:336-638
               
               
               Cow position:chr19:43570063-43570355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):187, 0

               
               
               Conread position:341-638
               
               
               Cow position:chr19:14959817-14960114 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:191
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:342-638
               
               
               Cow position:chr19:23650465-23650169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:369-638
               
               
               Cow position:chr19:20677995-20677726 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):255, 241

               
               
               Conread position:372-594
               
               
               Cow position:chr19:20635424-20635646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:154
               
               
               Alignm E-value:8e-29
               
               
               Alignm gaps (pig, cow):134, 143

               
               
               Conread position:372-634
               
               
               Cow position:chr19:43569931-43570193 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:173
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:372-638
               
               
               Cow position:chr19:20678160-20677894 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):150, 134

               
               
               Conread position:372-638
               
               
               Cow position:chr19:20678412-20678146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:168
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):80, 84

               
               
               Conread position:372-638
               
               
               Cow position:chr19:20678580-20678314 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:173
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):247, 252

               
               
               Conread position:372-638
               
               
               Cow position:chr19:23614817-23614551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:173
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):163, 175

               
               
               Conread position:376-638
               
               
               Cow position:chr19:23613973-23613711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:407-638
               
               
               Cow position:chr19:23615118-23614887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):7, 11

               
               
               Conread position:205-638
               
               
               Cow position:chr2:78755449-78755025 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:434
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):91, 0

               
               
               Conread position:206-600
               
               
               Cow position:chr2:78755197-78754811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:259
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):13, 34

               
               
               Conread position:256-638
               
               
               Cow position:chr2:78755649-78755277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:259-638
               
               
               Cow position:chr2:78755228-78754857 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:255
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):68, 37

               
               
               Conread position:259-638
               
               
               Cow position:chr2:78755312-78754941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:265
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):68, 37

               
               
               Conread position:305-638
               
               
               Cow position:chr2:82799882-82799551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:214
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):227, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr2:82800134-82799803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):245, 14

               
               
               Conread position:306-638
               
               
               Cow position:chr2:78755776-78755444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:224
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):9, 29

               
               
               Conread position:308-638
               
               
               Cow position:chr2:82800383-82800055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:214
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:315-634
               
               
               Cow position:chr2:78756016-78755697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:207
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):223, 213

               
               
               Conread position:315-638
               
               
               Cow position:chr2:5874330-5874653 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:205
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):68, 58

               
               
               Conread position:315-638
               
               
               Cow position:chr2:78754608-78754287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:218
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chr2:78755932-78755611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:205
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):52, 59

               
               
               Conread position:315-638
               
               
               Cow position:chr2:82800210-82799887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:201
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr2:86466118-86465795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:208
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):26, 32

               
               
               Conread position:317-638
               
               
               Cow position:chr2:5874416-5874737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:201
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):68, 56

               
               
               Conread position:319-554
               
               
               Cow position:chr2:82799701-82799467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:161
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):44, 11

               
               
               Conread position:322-636
               
               
               Cow position:chr2:78756262-78755947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:213
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):109, 151

               
               
               Conread position:331-598
               
               
               Cow position:chr2:78756335-78756070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:188
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):182, 34

               
               
               Conread position:334-638
               
               
               Cow position:chr2:78755663-78755360 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:216
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):33, 40

               
               
               Conread position:334-638
               
               
               Cow position:chr2:82800443-82800139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:199
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:353-639
               
               
               Cow position:chr2:82799752-82799466 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):179, 185

               
               
               Conread position:357-638
               
               
               Cow position:chr2:86465572-86465291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):245, 268

               
               
               Conread position:364-638
               
               
               Cow position:chr2:5874883-5875157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:180
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):17, 8

               
               
               Conread position:372-638
               
               
               Cow position:chr2:78756044-78755777 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):12, 103

               
               
               Conread position:373-638
               
               
               Cow position:chr2:86465640-86465375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):57, 48

               
               
               Conread position:377-638
               
               
               Cow position:chr2:5874307-5874569 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:167
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):7, 235

               
               
               Conread position:377-638
               
               
               Cow position:chr2:86466222-86465963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:404-638
               
               
               Cow position:chr2:78756428-78756198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:154
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:322-626
               
               
               Cow position:chr21:12608001-12608305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:322-638
               
               
               Cow position:chr21:12608589-12608905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:200
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):161, 151

               
               
               Conread position:334-599
               
               
               Cow position:chr21:12607929-12608194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):46, 42

               
               
               Conread position:334-639
               
               
               Cow position:chr21:34222723-34223028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:342-638
               
               
               Cow position:chr21:12608441-12608737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:379-638
               
               
               Cow position:chr21:34222600-34222859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:175
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):59, 76

               
               
               Conread position:404-638
               
               
               Cow position:chr21:34222541-34222775 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:156
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):24, 17

               
               
               Conread position:187-638
               
               
               Cow position:chr22:12499757-12499315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:281
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:190-638
               
               
               Cow position:chr22:12399212-12399651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:287
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:206-638
               
               
               Cow position:chr22:12399479-12399897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:271
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):54, 44

               
               
               Conread position:304-638
               
               
               Cow position:chr22:12430793-12431127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):159, 135

               
               
               Conread position:304-638
               
               
               Cow position:chr22:12431551-12431883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:213
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):307, 15

               
               
               Conread position:304-638
               
               
               Cow position:chr22:12431887-12432219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):45, 9

               
               
               Conread position:304-638
               
               
               Cow position:chr22:12475444-12475776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:304-638
               
               
               Cow position:chr22:12475612-12475944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:219
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:304-638
               
               
               Cow position:chr22:12499815-12499483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-598
               
               
               Cow position:chr22:12458336-12458627 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):226, 9

               
               
               Conread position:305-599
               
               
               Cow position:chr22:12499562-12499270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-637
               
               
               Cow position:chr22:11641046-11640716 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:203
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):56, 14

               
               
               Conread position:305-638
               
               
               Cow position:chr22:12475529-12475860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:207
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr22:12475697-12476028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr22:12476033-12476364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:222
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:306-638
               
               
               Cow position:chr22:12399064-12399399 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:226
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:307-638
               
               
               Cow position:chr22:12475949-12476280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:307-638
               
               
               Cow position:chr22:12499310-12498979 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:215
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):64, 76

               
               
               Conread position:312-638
               
               
               Cow position:chr22:12430717-12431043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):15, 20

               
               
               Conread position:314-599
               
               
               Cow position:chr22:12399411-12399696 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):49, 60

               
               
               Conread position:314-602
               
               
               Cow position:chr22:12457839-12458127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12385065-12385389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12385149-12385475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:330
               
               
               Alignm identity:216
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):13, 18

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12398907-12399231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:217
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):5, 9

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12398991-12399315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12399243-12399567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12430887-12431211 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:206
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):65, 49

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12431727-12432051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12431979-12432303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr22:12457923-12458247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):56, 60

               
               
               Conread position:314-638
               
               
               Cow position:chr22:14429995-14429671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:203
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):165, 160

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12384982-12385305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:221
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):202, 208

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12398824-12399147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12399496-12399819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:220
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):224, 217

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12418511-12418834 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):166, 170

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12431224-12431547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12431476-12431799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):63, 53

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12458092-12458415 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:205
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):34, 39

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12475369-12475692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12499218-12498895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:219
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr22:12499890-12499567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:204
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-639
               
               
               Cow position:chr22:12431056-12431380 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:213
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):35, 39

               
               
               Conread position:315-639
               
               
               Cow position:chr22:12499386-12499062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):312, 307

               
               
               Conread position:316-638
               
               
               Cow position:chr22:11641121-11640799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):69, 51

               
               
               Conread position:316-638
               
               
               Cow position:chr22:12431393-12431715 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):43, 57

               
               
               Conread position:316-638
               
               
               Cow position:chr22:12458177-12458499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:317-639
               
               
               Cow position:chr22:12475875-12476197 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):310, 305

               
               
               Conread position:321-638
               
               
               Cow position:chr22:12384906-12385221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:202
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):6, 0

               
               
               Conread position:321-638
               
               
               Cow position:chr22:12430558-12430875 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:197
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-599
               
               
               Cow position:chr22:11641451-11641174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:173
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):130, 121

               
               
               Conread position:322-620
               
               
               Cow position:chr22:12385411-12385709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):55, 45

               
               
               Conread position:322-638
               
               
               Cow position:chr22:11640947-11640631 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):99, 104

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12418602-12418918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):41, 51

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12431147-12431463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12457763-12458079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:201
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):282, 302

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12458015-12458331 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):39, 51

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12458267-12458583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:211
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):293, 298

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12475292-12475608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:212
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12475796-12476112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr22:12499463-12499147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):205, 212

               
               
               Conread position:322-638
               
               
               Cow position:chr22:46654606-46654290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:212
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):56, 49

               
               
               Conread position:322-639
               
               
               Cow position:chr22:12499967-12499650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:326-614
               
               
               Cow position:chr22:12399172-12399459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:203
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):40, 5

               
               
               Conread position:333-599
               
               
               Cow position:chr22:12430654-12430920 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):121, 108

               
               
               Conread position:333-638
               
               
               Cow position:chr22:12418697-12419002 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:196
               
               
               Alignm E-value:9e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr22:12398759-12399063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:198
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):44, 35

               
               
               Conread position:338-638
               
               
               Cow position:chr22:12418450-12418750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):204, 198

               
               
               Conread position:341-638
               
               
               Cow position:chr22:12432090-12432387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:365-638
               
               
               Cow position:chr22:11641156-11640883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):176, 171

               
               
               Conread position:373-638
               
               
               Cow position:chr22:14468265-14468000 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:171
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:378-638
               
               
               Cow position:chr22:14468344-14468084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:162
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:401-638
               
               
               Cow position:chr22:12475287-12475524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:160
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:401-638
               
               
               Cow position:chr22:12499972-12499735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:161
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:206-535
               
               
               Cow position:chr23:24626589-24626268 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):288, 90

               
               
               Conread position:304-502
               
               
               Cow position:chr23:24654222-24654024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):189, 9

               
               
               Conread position:304-638
               
               
               Cow position:chr23:24560281-24560613 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:218
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:305-583
               
               
               Cow position:chr23:24547058-24547334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr23:24560534-24560865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:211
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:308-638
               
               
               Cow position:chr23:24639989-24639661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:209
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:312-564
               
               
               Cow position:chr23:24535778-24536030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr23:24522219-24522543 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr23:24546813-24547137 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:218
               
               
               Alignm E-value:8.96831e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr23:25626796-25626475 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):281, 213

               
               
               Conread position:315-578
               
               
               Cow position:chr23:24560626-24560889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:167
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):116, 106

               
               
               Conread position:315-584
               
               
               Cow position:chr23:24626572-24626303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):261, 251

               
               
               Conread position:315-638
               
               
               Cow position:chr23:24522304-24522624 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:212
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):48, 59

               
               
               Conread position:315-638
               
               
               Cow position:chr23:24546898-24547221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:214
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chr23:24546982-24547305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr23:24560206-24560529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):217, 224

               
               
               Conread position:315-638
               
               
               Cow position:chr23:24560458-24560781 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:202
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr23:24626656-24626333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:211
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr23:24639816-24639493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:204
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr23:25626378-25626055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:211
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr23:25660499-25660176 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:211
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):139, 129

               
               
               Conread position:316-638
               
               
               Cow position:chr23:25723780-25724102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):210, 221

               
               
               Conread position:318-638
               
               
               Cow position:chr23:25626544-25626223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:204
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):17, 0

               
               
               Conread position:322-563
               
               
               Cow position:chr23:25723870-25724111 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):120, 124

               
               
               Conread position:322-605
               
               
               Cow position:chr23:24639474-24639191 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):7, 266

               
               
               Conread position:322-626
               
               
               Cow position:chr23:25626287-25625983 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:197
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:322-638
               
               
               Cow position:chr23:24535536-24535852 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:207
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr23:24546737-24547053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:210
               
               
               Alignm E-value:6e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr23:24560381-24560697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:214
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):41, 51

               
               
               Conread position:322-638
               
               
               Cow position:chr23:24639725-24639409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr23:25626872-25626559 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):39, 51

               
               
               Conread position:322-638
               
               
               Cow position:chr23:25698230-25698547 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:206
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):7, 81

               
               
               Conread position:323-638
               
               
               Cow position:chr23:25660659-25660344 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:199
               
               
               Alignm E-value:7e-21
               
               
               Alignm gaps (pig, cow):51, 40

               
               
               Conread position:327-600
               
               
               Cow position:chr23:25626450-25626177 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:329-638
               
               
               Cow position:chr23:24546660-24546969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:211
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:330-638
               
               
               Cow position:chr23:25660736-25660428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr23:24654363-24654058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:197
               
               
               Alignm E-value:9e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr23:25626945-25626640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:208
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-559
               
               
               Cow position:chr23:24654278-24654053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:147
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-600
               
               
               Cow position:chr23:25698411-25698677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:173
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):36, 26

               
               
               Conread position:334-638
               
               
               Cow position:chr23:24560141-24560445 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:212
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr23:24626721-24626417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:207
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr23:24639881-24639577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr23:24640049-24639745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:340-604
               
               
               Cow position:chr23:25660389-25660123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):33, 6

               
               
               Conread position:341-638
               
               
               Cow position:chr23:24639538-24639241 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:184
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):160, 150

               
               
               Conread position:341-638
               
               
               Cow position:chr23:24639622-24639325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):244, 236

               
               
               Conread position:341-638
               
               
               Cow position:chr23:25627021-25626724 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):29, 33

               
               
               Conread position:364-634
               
               
               Cow position:chr23:25660534-25660263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):163, 173

               
               
               Conread position:372-638
               
               
               Cow position:chr23:24522193-24522459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:179
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):160, 165

               
               
               Conread position:387-638
               
               
               Cow position:chr23:24626750-24626501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:171
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):31, 0

               
               
               Conread position:405-638
               
               
               Cow position:chr23:24560128-24560361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:159
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:429-638
               
               
               Cow position:chr23:24522166-24522375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:141
               
               
               Alignm E-value:9e-23
               
               
               Alignm gaps (pig, cow):187, 192

               
               
               Conread position:444-638
               
               
               Cow position:chr23:25723740-25723934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:130
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:190-638
               
               
               Cow position:chr24:17035915-17036354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:271
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):16, 0

               
               
               Conread position:301-638
               
               
               Cow position:chr24:17034924-17035262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:340
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):30, 155

               
               
               Conread position:305-638
               
               
               Cow position:chr24:17077822-17078153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:224
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:305-639
               
               
               Cow position:chr24:17070898-17070566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:219
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):58, 9

               
               
               Conread position:314-601
               
               
               Cow position:chr24:17035274-17035561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:185
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-626
               
               
               Cow position:chr24:17036114-17036426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:200
               
               
               Alignm E-value:7e-30
               
               
               Alignm gaps (pig, cow):57, 68

               
               
               Conread position:314-638
               
               
               Cow position:chr24:17036198-17036522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:210
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-639
               
               
               Cow position:chr24:17035106-17035431 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-639
               
               
               Cow position:chr24:17035946-17036271 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:206
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-557
               
               
               Cow position:chr24:17013427-17013185 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:153
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-626
               
               
               Cow position:chr24:17035863-17036174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:312
               
               
               Alignm identity:208
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-631
               
               
               Cow position:chr24:17070722-17070407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):48, 58

               
               
               Conread position:315-638
               
               
               Cow position:chr24:17035611-17035934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:212
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):216, 223

               
               
               Conread position:315-638
               
               
               Cow position:chr24:17070974-17070651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr24:17077662-17077985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr24:17077746-17078069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:219
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr24:17077914-17078237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:174
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:316-638
               
               
               Cow position:chr24:17035780-17036102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):50, 57

               
               
               Conread position:316-638
               
               
               Cow position:chr24:17077579-17077901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):41, 33

               
               
               Conread position:318-638
               
               
               Cow position:chr24:17070804-17070483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:322-626
               
               
               Cow position:chr24:17035198-17035502 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-632
               
               
               Cow position:chr24:17035449-17035760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:207
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):7, 300

               
               
               Conread position:322-638
               
               
               Cow position:chr24:17035365-17035682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:203
               
               
               Alignm E-value:8e-32
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr24:17035534-17035850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):210, 215

               
               
               Conread position:326-599
               
               
               Cow position:chr24:17036295-17036564 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:334-626
               
               
               Cow position:chr24:17035042-17035334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):29, 39

               
               
               Conread position:334-638
               
               
               Cow position:chr24:17071039-17070735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:205
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):20, 15

               
               
               Conread position:334-638
               
               
               Cow position:chr24:17077513-17077817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:342-638
               
               
               Cow position:chr24:17013484-17013188 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:193
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):175, 181

               
               
               Conread position:395-638
               
               
               Cow position:chr24:17071062-17070819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):221, 227

               
               
               Conread position:205-638
               
               
               Cow position:chr25:33299684-33299259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:279
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):17, 37

               
               
               Conread position:258-557
               
               
               Cow position:chr25:33128030-33127739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):39, 0

               
               
               Conread position:259-638
               
               
               Cow position:chr25:33157078-33157449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:238
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:259-638
               
               
               Cow position:chr25:34769309-34769680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:250
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):38, 0

               
               
               Conread position:273-640
               
               
               Cow position:chr25:34447319-34446960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:304-600
               
               
               Cow position:chr25:34769768-34770062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-630
               
               
               Cow position:chr25:36800902-36800579 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:212
               
               
               Alignm E-value:9e-34
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr25:33157202-33157532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):58, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr25:33299170-33298839 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:230
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr25:33299254-33298923 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:227
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr25:33299338-33299007 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:225
               
               
               Alignm E-value:6.99949e-42
               
               
               Alignm gaps (pig, cow):71, 14

               
               
               Conread position:305-638
               
               
               Cow position:chr25:33299506-33299175 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:223
               
               
               Alignm E-value:6e-40
               
               
               Alignm gaps (pig, cow):22, 14

               
               
               Conread position:305-638
               
               
               Cow position:chr25:33299674-33299343 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:226
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr25:36801070-36800739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:219
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):22, 12

               
               
               Conread position:305-638
               
               
               Cow position:chr25:36801238-36800907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:217
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):19, 14

               
               
               Conread position:305-638
               
               
               Cow position:chr25:36801814-36801483 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr25:36801898-36801567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:225
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:306-636
               
               
               Cow position:chr25:33305695-33306021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:333
               
               
               Alignm identity:219
               
               
               Alignm E-value:9e-34
               
               
               Alignm gaps (pig, cow):295, 8

               
               
               Conread position:306-638
               
               
               Cow position:chr25:34447715-34447382 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:223
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:308-638
               
               
               Cow position:chr25:33299755-33299427 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:225
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):19, 11

               
               
               Conread position:312-638
               
               
               Cow position:chr25:33145364-33145038 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:208
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):226, 216

               
               
               Conread position:312-638
               
               
               Cow position:chr25:34769690-34770016 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:214
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-561
               
               
               Cow position:chr25:23420563-23420316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:163
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-599
               
               
               Cow position:chr25:36800811-36800526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):15, 20

               
               
               Conread position:314-619
               
               
               Cow position:chr25:33305139-33305437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:206
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):13, 18

               
               
               Conread position:314-638
               
               
               Cow position:chr25:23420731-23420407 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:217
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):13, 18

               
               
               Conread position:315-587
               
               
               Cow position:chr25:33298742-33298470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-630
               
               
               Cow position:chr25:33298826-33298511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:205
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chr25:33145193-33144873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:204
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):157, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr25:33299414-33299091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:214
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):12, 19

               
               
               Conread position:315-638
               
               
               Cow position:chr25:34447453-34447130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:209
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chr25:34447537-34447214 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:204
               
               
               Alignm E-value:7e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr25:34769609-34769932 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:213
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr25:36801722-36801399 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:316-614
               
               
               Cow position:chr25:36801637-36801339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):11, 16

               
               
               Conread position:316-638
               
               
               Cow position:chr25:34769442-34769764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:214
               
               
               Alignm E-value:7.00005e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:316-638
               
               
               Cow position:chr25:34769526-34769848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:212
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:317-567
               
               
               Cow position:chr25:33306205-33306451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):85, 0

               
               
               Conread position:317-638
               
               
               Cow position:chr25:33156792-33157113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:203
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):291, 306

               
               
               Conread position:319-601
               
               
               Cow position:chr25:34769866-34770147 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-30
               
               
               Alignm gaps (pig, cow):247, 11

               
               
               Conread position:322-638
               
               
               Cow position:chr25:23420807-23420491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:214
               
               
               Alignm E-value:8.96831e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr25:33304982-33305295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:211
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):68, 134

               
               
               Conread position:322-638
               
               
               Cow position:chr25:33305067-33305378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:219
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):216, 46

               
               
               Conread position:322-638
               
               
               Cow position:chr25:36801139-36800823 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:220
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:322-639
               
               
               Cow position:chr25:327263-326946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):61, 51

               
               
               Conread position:323-638
               
               
               Cow position:chr25:326836-326521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:197
               
               
               Alignm E-value:5e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:326-638
               
               
               Cow position:chr25:33298898-33298587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:212
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:326-638
               
               
               Cow position:chr25:36800966-36800655 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:211
               
               
               Alignm E-value:6.99949e-42
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr25:367054-366749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:346776-346472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:195
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):207, 202

               
               
               Conread position:334-638
               
               
               Cow position:chr25:23420879-23420575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:33128046-33127742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:33128130-33127826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:206
               
               
               Alignm E-value:6.99949e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:33128214-33127910 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:208
               
               
               Alignm E-value:8.96831e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:33298975-33298671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:212
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):283, 277

               
               
               Conread position:334-638
               
               
               Cow position:chr25:33299815-33299511 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:214
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:33305642-33305940 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):75, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:34447350-34447046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-26
               
               
               Alignm gaps (pig, cow):198, 205

               
               
               Conread position:334-638
               
               
               Cow position:chr25:34447602-34447298 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:208
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):29, 40

               
               
               Conread position:334-638
               
               
               Cow position:chr25:36801295-36800991 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr25:36801955-36801651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:206
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):216, 210

               
               
               Conread position:334-639
               
               
               Cow position:chr25:33145426-33145121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):288, 278

               
               
               Conread position:338-638
               
               
               Cow position:chr25:326653-326353 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):25, 34

               
               
               Conread position:341-638
               
               
               Cow position:chr25:33299052-33298755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:370-639
               
               
               Cow position:chr25:33306095-33306355 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:178
               
               
               Alignm E-value:8e-22
               
               
               Alignm gaps (pig, cow):103, 81

               
               
               Conread position:372-638
               
               
               Cow position:chr25:34769246-34769512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:372-638
               
               
               Cow position:chr25:36801340-36801075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):64, 10

               
               
               Conread position:374-600
               
               
               Cow position:chr25:22236118-22235891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:228
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-24
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:383-638
               
               
               Cow position:chr25:33305438-33305694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):53, 123

               
               
               Conread position:392-638
               
               
               Cow position:chr25:33128240-33127994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:155
               
               
               Alignm E-value:7e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:418-640
               
               
               Cow position:chr25:23420879-23420657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:206-638
               
               
               Cow position:chr27:21615492-21615915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:434
               
               
               Alignm identity:259
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):157, 75

               
               
               Conread position:206-638
               
               
               Cow position:chr28:9253551-9253127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:437
               
               
               Alignm identity:300
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):15, 37

               
               
               Conread position:267-638
               
               
               Cow position:chr28:7810983-7810615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:247
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):349, 29

               
               
               Conread position:305-599
               
               
               Cow position:chr28:7758679-7758387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:295
               
               
               Alignm identity:205
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-601
               
               
               Cow position:chr28:9253206-9252911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):269, 22

               
               
               Conread position:305-636
               
               
               Cow position:chr28:9253290-9252961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr28:7757939-7757608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:236
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr28:7810862-7810531 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:228
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):227, 9

               
               
               Conread position:306-638
               
               
               Cow position:chr28:9253378-9253043 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):9, 29

               
               
               Conread position:308-613
               
               
               Cow position:chr28:9290352-9290053 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:201
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):259, 21

               
               
               Conread position:308-638
               
               
               Cow position:chr28:9299083-9298758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:331
               
               
               Alignm identity:213
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):13, 0

               
               
               Conread position:314-535
               
               
               Cow position:chr28:9298829-9298611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:152
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:314-581
               
               
               Cow position:chr28:9299485-9299218 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-599
               
               
               Cow position:chr28:11333621-11333906 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:180
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):217, 223

               
               
               Conread position:314-638
               
               
               Cow position:chr28:7758756-7758432 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:214
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):13, 21

               
               
               Conread position:314-638
               
               
               Cow position:chr28:11333537-11333861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:204
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):70, 59

               
               
               Conread position:315-519
               
               
               Cow position:chr28:7810443-7810248 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):160, 0

               
               
               Conread position:315-559
               
               
               Cow position:chr28:7810527-7810283 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:157
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-637
               
               
               Cow position:chr28:7757679-7757357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr28:7758015-7757692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr28:7758183-7757860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr28:7758267-7757944 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr28:7810770-7810456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:215
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):246, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr28:9253534-9253211 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr28:9290597-9290276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:214
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chr28:34696427-34696104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:198
               
               
               Alignm E-value:8e-23
               
               
               Alignm gaps (pig, cow):299, 286

               
               
               Conread position:318-638
               
               
               Cow position:chr28:7758835-7758516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:322
               
               
               Alignm identity:209
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):43, 37

               
               
               Conread position:318-638
               
               
               Cow position:chr28:9253615-9253295 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:321
               
               
               Alignm identity:234
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr28:7757840-7757524 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr28:7758092-7757776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:322-638
               
               
               Cow position:chr28:34679219-34679536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:209
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):41, 7

               
               
               Conread position:326-638
               
               
               Cow position:chr28:9299556-9299245 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:216
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):54, 5

               
               
               Conread position:327-638
               
               
               Cow position:chr28:33210563-33210252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:193
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):241, 232

               
               
               Conread position:334-638
               
               
               Cow position:chr28:7758332-7758028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:217
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:338-638
               
               
               Cow position:chr28:7757740-7757440 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:341-639
               
               
               Cow position:chr28:7757569-7757277 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:300
               
               
               Alignm identity:195
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):194, 207

               
               
               Conread position:352-638
               
               
               Cow position:chr28:9299208-9298925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:182
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:352-638
               
               
               Cow position:chr28:33210623-33210336 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):64, 0

               
               
               Conread position:366-638
               
               
               Cow position:chr28:9290714-9290443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:186
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):253, 0

               
               
               Conread position:398-638
               
               
               Cow position:chr28:7810528-7810288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:171
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:404-638
               
               
               Cow position:chr28:9299563-9299329 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:235
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:143-638
               
               
               Cow position:chr29:39626832-39627316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:500
               
               
               Alignm identity:306
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):7, 64

               
               
               Conread position:305-602
               
               
               Cow position:chr29:39626904-39627199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):222, 8

               
               
               Conread position:334-639
               
               
               Cow position:chr29:39626847-39627152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):277, 290

               
               
               Conread position:273-638
               
               
               Cow position:chr3:68046150-68045793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:367
               
               
               Alignm identity:229
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):244, 23

               
               
               Conread position:305-638
               
               
               Cow position:chr3:62721802-62722133 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:210
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):222, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr3:68046208-68045877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:218
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):22, 13

               
               
               Conread position:305-638
               
               
               Cow position:chr3:68046292-68045961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:205
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:306-638
               
               
               Cow position:chr3:68027703-68027368 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:205
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:308-634
               
               
               Cow position:chr3:62722057-62722381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):266, 19

               
               
               Conread position:314-614
               
               
               Cow position:chr3:62742958-62742659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:303
               
               
               Alignm identity:203
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):49, 59

               
               
               Conread position:314-636
               
               
               Cow position:chr3:62743440-62743118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:213
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):46, 64

               
               
               Conread position:315-638
               
               
               Cow position:chr3:62721894-62722217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:216
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):300, 306

               
               
               Conread position:315-638
               
               
               Cow position:chr3:68046032-68045709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:213
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):134, 129

               
               
               Conread position:315-638
               
               
               Cow position:chr3:77350652-77350967 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:205
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):202, 48

               
               
               Conread position:317-638
               
               
               Cow position:chr3:62721644-62721965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:210
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):284, 296

               
               
               Conread position:319-638
               
               
               Cow position:chr3:62721731-62722049 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:218
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):44, 11

               
               
               Conread position:322-526
               
               
               Cow position:chr3:68027264-68027060 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:137
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-601
               
               
               Cow position:chr3:62743029-62742754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):155, 22

               
               
               Conread position:322-638
               
               
               Cow position:chr3:62721984-62722301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:220
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):9, 53

               
               
               Conread position:322-638
               
               
               Cow position:chr3:62742699-62742386 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:194
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):50, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr3:68045941-68045625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):209, 214

               
               
               Conread position:329-638
               
               
               Cow position:chr3:62721572-62721881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:311
               
               
               Alignm identity:211
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):203, 208

               
               
               Conread position:330-636
               
               
               Cow position:chr3:68027424-68027118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:307
               
               
               Alignm identity:194
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr3:62743337-62743037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):229, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr3:68046349-68046045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:198
               
               
               Alignm E-value:6e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:372-601
               
               
               Cow position:chr3:68027718-68027489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:230
               
               
               Alignm identity:155
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-525
               
               
               Cow position:chr5:34281605-34281394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):55, 59

               
               
               Conread position:360-609
               
               
               Cow position:chr5:34281642-34281394 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:172
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):49, 11

               
               
               Conread position:305-638
               
               
               Cow position:chr6:49340759-49340428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:222
               
               
               Alignm E-value:9e-39
               
               
               Alignm gaps (pig, cow):138, 14

               
               
               Conread position:305-638
               
               
               Cow position:chr6:49340843-49340512 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:334
               
               
               Alignm identity:212
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr6:49341095-49340764 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:219
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):224, 9

               
               
               Conread position:314-638
               
               
               Cow position:chr6:49396557-49396233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:200
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr6:49341171-49340848 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:207
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):295, 305

               
               
               Conread position:315-638
               
               
               Cow position:chr6:49341423-49341100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:215
               
               
               Alignm E-value:9e-39
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:316-594
               
               
               Cow position:chr6:49340666-49340388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr6:49340996-49340680 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:206
               
               
               Alignm E-value:7e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-638
               
               
               Cow position:chr6:49341332-49341016 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):206, 213

               
               
               Conread position:341-638
               
               
               Cow position:chr6:49396446-49396155 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:301
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):16, 11

               
               
               Conread position:365-638
               
               
               Cow position:chr6:49341455-49341184 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:373-638
               
               
               Cow position:chr6:49340861-49340596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:183-633
               
               
               Cow position:chr7:1439941-1439499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:457
               
               
               Alignm identity:293
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):71, 23

               
               
               Conread position:195-638
               
               
               Cow position:chr7:3180239-3179805 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:445
               
               
               Alignm identity:279
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):24, 10

               
               
               Conread position:205-638
               
               
               Cow position:chr7:42878575-42879000 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:285
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):159, 94

               
               
               Conread position:206-578
               
               
               Cow position:chr7:42878912-42879276 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:373
               
               
               Alignm identity:248
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:231-638
               
               
               Cow position:chr7:42878769-42879168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:284
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):65, 0

               
               
               Conread position:259-638
               
               
               Cow position:chr7:42878545-42878916 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:256
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:265-638
               
               
               Cow position:chr7:11600714-11601079 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:240
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):62, 31

               
               
               Conread position:304-599
               
               
               Cow position:chr7:1015043-1014750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:304-638
               
               
               Cow position:chr7:3180725-3180393 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:218
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):15, 0

               
               
               Conread position:305-638
               
               
               Cow position:chr7:1015378-1015047 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:227
               
               
               Alignm E-value:5.04467e-44
               
               
               Alignm gaps (pig, cow):237, 9

               
               
               Conread position:307-638
               
               
               Cow position:chr7:1440243-1439915 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:218
               
               
               Alignm E-value:8e-38
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:312-639
               
               
               Cow position:chr7:42878338-42878665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-564
               
               
               Cow position:chr7:3179961-3179711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:158
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr7:3180045-3179721 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:204
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr7:3180213-3179889 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:217
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):51, 60

               
               
               Conread position:314-638
               
               
               Cow position:chr7:3180465-3180141 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:220
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr7:3180549-3180225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:211
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr7:3180633-3180309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:215
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):228, 222

               
               
               Conread position:314-638
               
               
               Cow position:chr7:18390762-18390438 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:208
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-600
               
               
               Cow position:chr7:18390425-18390140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:189
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):169, 160

               
               
               Conread position:315-610
               
               
               Cow position:chr7:11600588-11600883 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:297
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):43, 58

               
               
               Conread position:315-638
               
               
               Cow position:chr7:1014698-1014381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:203
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):36, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr7:1439985-1439660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:212
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):296, 19

               
               
               Conread position:315-638
               
               
               Cow position:chr7:8325164-8324841 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:328
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):43, 58

               
               
               Conread position:315-638
               
               
               Cow position:chr7:18390677-18390354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:210
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):111, 116

               
               
               Conread position:315-638
               
               
               Cow position:chr7:42878425-42878748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chr7:42878929-42879252 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:235
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:321-632
               
               
               Cow position:chr7:11600846-11601157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:200
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):211, 217

               
               
               Conread position:322-597
               
               
               Cow position:chr7:1014943-1014668 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):254, 245

               
               
               Conread position:322-638
               
               
               Cow position:chr7:3180794-3180477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:211
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):7, 291

               
               
               Conread position:322-638
               
               
               Cow position:chr7:3180876-3180561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:212
               
               
               Alignm E-value:9e-39
               
               
               Alignm gaps (pig, cow):43, 83

               
               
               Conread position:322-638
               
               
               Cow position:chr7:42878768-42879084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:326-638
               
               
               Cow position:chr7:1015274-1014963 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):288, 5

               
               
               Conread position:330-638
               
               
               Cow position:chr7:1014605-1014297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:207
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):35, 44

               
               
               Conread position:332-638
               
               
               Cow position:chr7:42878189-42878496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:310
               
               
               Alignm identity:213
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):31, 41

               
               
               Conread position:333-638
               
               
               Cow position:chr7:11600438-11600743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:202
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):35, 40

               
               
               Conread position:333-638
               
               
               Cow position:chr7:42878275-42878580 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:218
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chr7:1015435-1015131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):197, 205

               
               
               Conread position:334-638
               
               
               Cow position:chr7:42878528-42878832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:211
               
               
               Alignm E-value:5.04467e-44
               
               
               Alignm gaps (pig, cow):218, 201

               
               
               Conread position:341-638
               
               
               Cow position:chr7:8278339-8278040 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:198
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):15, 29

               
               
               Conread position:352-638
               
               
               Cow position:chr7:1438727-1438441 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:355-517
               
               
               Cow position:chr7:8278070-8277909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:117
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):83, 12

               
               
               Conread position:364-634
               
               
               Cow position:chr7:1440272-1440002 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:180
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:365-638
               
               
               Cow position:chr7:18390459-18390186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:365-638
               
               
               Cow position:chr7:18390795-18390522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:372-601
               
               
               Cow position:chr7:11600981-11601210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:151
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):176, 160

               
               
               Conread position:372-638
               
               
               Cow position:chr7:18390536-18390270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:182
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:373-638
               
               
               Cow position:chr7:8325190-8324925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):161, 144

               
               
               Conread position:373-638
               
               
               Cow position:chr7:11600562-11600827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:182-638
               
               
               Cow position:chr8:46816600-46816153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:460
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):64, 24

               
               
               Conread position:183-638
               
               
               Cow position:chr8:46817103-46816657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:459
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):10, 23

               
               
               Conread position:205-616
               
               
               Cow position:chr8:45201299-45200896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:415
               
               
               Alignm identity:267
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):17, 35

               
               
               Conread position:206-638
               
               
               Cow position:chr8:46816745-46816321 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:433
               
               
               Alignm identity:287
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):90, 0

               
               
               Conread position:206-638
               
               
               Cow position:chr8:48406678-48407102 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:436
               
               
               Alignm identity:282
               
               
               Alignm E-value:8.99999e-40
               
               
               Alignm gaps (pig, cow):41, 51

               
               
               Conread position:238-638
               
               
               Cow position:chr8:46816461-46816069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:402
               
               
               Alignm identity:254
               
               
               Alignm E-value:5e-34
               
               
               Alignm gaps (pig, cow):364, 58

               
               
               Conread position:304-477
               
               
               Cow position:chr8:6957892-6958063 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:122
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):14, 0

               
               
               Conread position:304-638
               
               
               Cow position:chr8:48406348-48406682 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):23, 28

               
               
               Conread position:305-599
               
               
               Cow position:chr8:55581681-55581389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:191
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):45, 17

               
               
               Conread position:305-637
               
               
               Cow position:chr8:46816232-46815899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:338
               
               
               Alignm identity:219
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):59, 9

               
               
               Conread position:305-638
               
               
               Cow position:chr8:55581597-55581266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:213
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):212, 9

               
               
               Conread position:313-638
               
               
               Cow position:chr8:46816814-46816489 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:327
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):14, 19

               
               
               Conread position:314-634
               
               
               Cow position:chr8:45201114-45200793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):13, 18

               
               
               Conread position:314-638
               
               
               Cow position:chr8:45201450-45201126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:233
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr8:45201534-45201210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:225
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr8:45201618-45201294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:215
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr8:45201786-45201462 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 18

               
               
               Conread position:314-638
               
               
               Cow position:chr8:46816897-46816573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:222
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):300, 293

               
               
               Conread position:314-638
               
               
               Cow position:chr8:46817149-46816825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:216
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr8:46817317-46816993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chr8:55581254-55580930 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:215
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):218, 231

               
               
               Conread position:314-638
               
               
               Cow position:chr8:55581506-55581182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:207
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr8:45201701-45201378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:227
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr8:46816728-46816405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chr8:48407199-48407522 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:211
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:316-557
               
               
               Cow position:chr8:6957818-6958059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:160
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):47, 58

               
               
               Conread position:316-638
               
               
               Cow position:chr8:46817231-46816909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):11, 16

               
               
               Conread position:317-601
               
               
               Cow position:chr8:48407033-48407317 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):61, 50

               
               
               Conread position:317-638
               
               
               Cow position:chr8:55581756-55581434 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:323
               
               
               Alignm identity:202
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):18, 0

               
               
               Conread position:321-638
               
               
               Cow position:chr8:46816302-46815985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:214
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):59, 49

               
               
               Conread position:322-638
               
               
               Cow position:chr8:55581163-55580846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:199
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):7, 282

               
               
               Conread position:322-638
               
               
               Cow position:chr8:55581331-55581014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:217
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:322-639
               
               
               Cow position:chr8:45201862-45201545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:228
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:323-595
               
               
               Cow position:chr8:48407375-48407647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:323-638
               
               
               Cow position:chr8:45201273-45200958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:218
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):27, 31

               
               
               Conread position:324-638
               
               
               Cow position:chr8:46817392-46817077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:216
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:325-638
               
               
               Cow position:chr8:45201943-45201630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:219
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:326-638
               
               
               Cow position:chr8:55581409-55581098 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:313
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:327-639
               
               
               Cow position:chr8:48407127-48407439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:200
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):37, 47

               
               
               Conread position:331-638
               
               
               Cow position:chr8:48406291-48406598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:308
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chr8:48406965-48407270 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-602
               
               
               Cow position:chr8:48406882-48407150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):197, 202

               
               
               Conread position:334-638
               
               
               Cow position:chr8:45201346-45201042 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:210
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:346-638
               
               
               Cow position:chr8:45202006-45201714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:207
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):13, 28

               
               
               Conread position:205-599
               
               
               Cow position:chrX:25325390-25325776 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:398
               
               
               Alignm identity:250
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):17, 35

               
               
               Conread position:205-638
               
               
               Cow position:chrX:25325138-25325563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:438
               
               
               Alignm identity:292
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):17, 35

               
               
               Conread position:206-638
               
               
               Cow position:chrX:29044812-29045236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:435
               
               
               Alignm identity:288
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):16, 34

               
               
               Conread position:256-638
               
               
               Cow position:chrX:29044778-29045152 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:383
               
               
               Alignm identity:272
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):40, 0

               
               
               Conread position:259-638
               
               
               Cow position:chrX:25324688-25325059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:261
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:273-638
               
               
               Cow position:chrX:25324366-25324723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:366
               
               
               Alignm identity:249
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):23, 0

               
               
               Conread position:305-636
               
               
               Cow position:chrX:25325400-25325729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:332
               
               
               Alignm identity:214
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):12, 0

               
               
               Conread position:305-638
               
               
               Cow position:chrX:25310413-25310082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:336
               
               
               Alignm identity:226
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):22, 9

               
               
               Conread position:306-638
               
               
               Cow position:chrX:25310580-25310250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:335
               
               
               Alignm identity:226
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):21, 11

               
               
               Conread position:308-524
               
               
               Cow position:chrX:29045559-29045773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:145
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:314-638
               
               
               Cow position:chrX:25310238-25309914 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:218
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):71, 53

               
               
               Conread position:314-638
               
               
               Cow position:chrX:25324483-25324807 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:214
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chrX:25324903-25325227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:232
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:314-638
               
               
               Cow position:chrX:25324987-25325311 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):56, 69

               
               
               Conread position:314-638
               
               
               Cow position:chrX:25325071-25325395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:326
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):13, 18

               
               
               Conread position:315-598
               
               
               Cow position:chrX:29045081-29045361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chrX:25310069-25309746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:219
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chrX:25324316-25324639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:229
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chrX:25324652-25324975 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:226
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:315-638
               
               
               Cow position:chrX:25325156-25325479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:231
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:315-638
               
               
               Cow position:chrX:29044745-29045068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:325
               
               
               Alignm identity:237
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):12, 17

               
               
               Conread position:322-636
               
               
               Cow position:chrX:25325331-25325645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:315
               
               
               Alignm identity:223
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:322-636
               
               
               Cow position:chrX:29045487-29045801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:211
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:322-638
               
               
               Cow position:chrX:25324575-25324891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:318
               
               
               Alignm identity:224
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):5, 10

               
               
               Conread position:326-639
               
               
               Cow position:chrX:25310477-25310165 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:314
               
               
               Alignm identity:206
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):5, 0

               
               
               Conread position:333-638
               
               
               Cow position:chrX:25310303-25309998 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:201
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chrX:25324250-25324555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:333-638
               
               
               Cow position:chrX:25324838-25325143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:209
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:334-638
               
               
               Cow position:chrX:29044680-29044984 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:222
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:338-600
               
               
               Cow position:chrX:25309962-25309700 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:187
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:338-638
               
               
               Cow position:chrX:29045419-29045719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:206
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):29, 36

               
               
               Conread position:373-638
               
               
               Cow position:chrX:25310095-25309830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:186
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:399-638
               
               
               Cow position:chrX:29044661-29044900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:175
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):0, 0
Conread position:	206-627
Cow position:	chr10:8996482-8996895 (view UCSC Genome Browser custom track)
Alignm length:	422
Alignm identity:	267
Alignm E-value:	9e-39
Alignm gaps (pig, cow):	90, 0
Conread position:	273-638
Cow position:	chr10:9010193-9010550 (view UCSC Genome Browser custom track)
Alignm length:	366
Alignm identity:	224
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	30, 0
Conread position:	305-638
Cow position:	chr10:9010135-9010466 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	214
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	14, 0
Conread position:	308-638
Cow position:	chr10:9031599-9031271 (view UCSC Genome Browser custom track)
Alignm length:	331
Alignm identity:	211
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	11, 0
Conread position:	314-638
Cow position:	chr10:8996078-8996402 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	215
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	0, 0
Conread position:	315-638
Cow position:	chr10:8996331-8996654 (view UCSC Genome Browser custom track)
Alignm length:	325
Alignm identity:	220
Alignm E-value:	2.00386e-43
Alignm gaps (pig, cow):	116, 106
Conread position:	316-599
Cow position:	chr10:8996500-8996783 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	194
Alignm E-value:	3e-40
Alignm gaps (pig, cow):	0, 0
Conread position:	316-638
Cow position:	chr10:8996164-8996486 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	204
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	0, 0
Conread position:	322-563
Cow position:	chr10:9010318-9010559 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	162
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	127, 122
Conread position:	322-638
Cow position:	chr10:8996254-8996570 (view UCSC Genome Browser custom track)
Alignm length:	317
Alignm identity:	216
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	0, 0
Conread position:	322-639
Cow position:	chr10:9031503-9031186 (view UCSC Genome Browser custom track)
Alignm length:	319
Alignm identity:	210
Alignm E-value:	7e-37
Alignm gaps (pig, cow):	5, 10
Conread position:	330-638
Cow position:	chr10:8996010-8996318 (view UCSC Genome Browser custom track)
Alignm length:	309
Alignm identity:	207
Alignm E-value:	9.99995e-41
Alignm gaps (pig, cow):	0, 0
Conread position:	334-637
Cow position:	chr10:21938834-21939137 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	198
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	184, 195
Conread position:	372-638
Cow position:	chr10:9009864-9010130 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	174
Alignm E-value:	8e-27
Alignm gaps (pig, cow):	241, 229
Conread position:	382-638
Cow position:	chr10:9031611-9031355 (view UCSC Genome Browser custom track)
Alignm length:	257
Alignm identity:	174
Alignm E-value:	5e-34
Alignm gaps (pig, cow):	0, 0
Conread position:	405-639
Cow position:	chr10:8996001-8996235 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	158
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	0, 0
Conread position:	315-639
Cow position:	chr11:74554254-74554578 (view UCSC Genome Browser custom track)
Alignm length:	326
Alignm identity:	219
Alignm E-value:	4.99983e-42
Alignm gaps (pig, cow):	216, 221
Conread position:	319-564
Cow position:	chr11:74554847-74555091 (view UCSC Genome Browser custom track)
Alignm length:	246
Alignm identity:	164
Alignm E-value:	1e-28
Alignm gaps (pig, cow):	11, 0
Conread position:	319-599
Cow position:	chr11:74554343-74554622 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	178
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	12, 0
Conread position:	404-638
Cow position:	chr11:74554175-74554409 (view UCSC Genome Browser custom track)
Alignm length:	235
Alignm identity:	151
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	0, 0