Non-Coding RNA Search

Cow genome map


           Conread name:
           Ova1-OVRM10081B09
        

               Conread position:
               1-500
               

               Cow position:
               chr1:18139518-18139043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 16
               

               Conread position:
               1-518
               

               Cow position:
               chr1:5548823-5548307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               334
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               96, 75
               

               Conread position:
               1-531
               

               Cow position:
               chr1:65923757-65923218 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               355
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               233, 26
               

               Conread position:
               1-655
               

               Cow position:
               chr1:67292564-67293210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               660
               

               Alignm identity:
               423
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 148
               

               Conread position:
               1-683
               

               Cow position:
               chr1:32908754-32909440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               712
               

               Alignm identity:
               485
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 56
               

               Conread position:
               1-683
               

               Cow position:
               chr1:40643191-40643842 (view UCSC Genome Browser custom track)
               

               Alignm length:
               687
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 75
               

               Conread position:
               1-732
               

               Cow position:
               chr1:79111422-79112129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               502
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               253, 175
               

               Conread position:
               1-735
               

               Cow position:
               chr1:40512078-40511350 (view UCSC Genome Browser custom track)
               

               Alignm length:
               748
               

               Alignm identity:
               514
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 43
               

               Conread position:
               2-735
               

               Cow position:
               chr1:73198090-73197365 (view UCSC Genome Browser custom track)
               

               Alignm length:
               743
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 148
               

               Conread position:
               3-733
               

               Cow position:
               chr1:99019074-99018358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               740
               

               Alignm identity:
               543
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 134
               

               Conread position:
               5-517
               

               Cow position:
               chr1:101861125-101860633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               8-653
               

               Cow position:
               chr1:70419439-70418804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               660
               

               Alignm identity:
               470
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               202, 57
               

               Conread position:
               64-740
               

               Cow position:
               chr1:67326928-67326284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               687
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               76-540
               

               Cow position:
               chr1:16581494-16581055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 7
               

               Conread position:
               76-540
               

               Cow position:
               chr1:16587070-16586631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 7
               

               Conread position:
               94-693
               

               Cow position:
               chr1:72992547-72993117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               604
               

               Alignm identity:
               419
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 48
               

               Conread position:
               135-735
               

               Cow position:
               chr1:13581915-13581323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               612
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 56
               

               Conread position:
               137-709
               

               Cow position:
               chr1:81841400-81840845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               580
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 12
               

               Conread position:
               173-735
               

               Cow position:
               chr1:46836721-46837295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 148
               

               Conread position:
               175-704
               

               Cow position:
               chr1:40749127-40748608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               538
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 77
               

               Conread position:
               183-735
               

               Cow position:
               chr1:78923343-78923890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               559
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               210-618
               

               Cow position:
               chr1:41782167-41781764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               293
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               18, 68
               

               Conread position:
               241-735
               

               Cow position:
               chr1:85532189-85531687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               511
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               244-732
               

               Cow position:
               chr1:43984928-43984439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 187
               

               Conread position:
               245-712
               

               Cow position:
               chr1:81927463-81927024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               306
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               259, 97
               

               Conread position:
               245-712
               

               Cow position:
               chr1:91529468-91529010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               294
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               34, 131
               

               Conread position:
               248-694
               

               Cow position:
               chr1:74255360-74254892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               475
               

               Alignm identity:
               307
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 138
               

               Conread position:
               258-735
               

               Cow position:
               chr1:51965466-51965946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               486
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               105, 77
               

               Conread position:
               278-611
               

               Cow position:
               chr1:66486931-66487266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               142, 26
               

               Conread position:
               309-726
               

               Cow position:
               chr1:93235939-93236353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 99
               

               Conread position:
               342-605
               

               Cow position:
               chr1:82929139-82928876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               65, 100
               

               Conread position:
               375-552
               

               Cow position:
               chr1:29607970-29607793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               93, 38
               

               Conread position:
               397-712
               

               Cow position:
               chr1:76095730-76095419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               400-694
               

               Cow position:
               chr1:92668098-92667799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               154, 14
               

               Conread position:
               416-681
               

               Cow position:
               chr1:33581143-33580877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               20, 150
               

               Conread position:
               429-735
               

               Cow position:
               chr1:57746033-57745725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               93, 75
               

               Conread position:
               434-735
               

               Cow position:
               chr1:77115300-77114992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               149, 86
               

               Conread position:
               441-610
               

               Cow position:
               chr1:84152280-84152451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               125
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               120, 61
               

               Conread position:
               1-572
               

               Cow position:
               chr10:64145887-64146453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 71
               

               Conread position:
               1-602
               

               Cow position:
               chr10:14862645-14863217 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               413
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               192, 39
               

               Conread position:
               1-712
               

               Cow position:
               chr10:57501777-57502471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               715
               

               Alignm identity:
               487
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 46
               

               Conread position:
               1-732
               

               Cow position:
               chr10:10720224-10719533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               462
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               66, 74
               

               Conread position:
               1-734
               

               Cow position:
               chr10:39779164-39778439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               742
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 256
               

               Conread position:
               1-735
               

               Cow position:
               chr10:11821709-11822441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               578
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 189
               

               Conread position:
               1-735
               

               Cow position:
               chr10:38849258-38849960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               480, 130
               

               Conread position:
               6-712
               

               Cow position:
               chr10:20370115-20369441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               711
               

               Alignm identity:
               490
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 90
               

               Conread position:
               41-719
               

               Cow position:
               chr10:40640959-40641625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               684
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               408, 21
               

               Conread position:
               54-484
               

               Cow position:
               chr10:2725683-2726108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               104, 33
               

               Conread position:
               57-614
               

               Cow position:
               chr10:51782399-51781839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               406
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               346, 108
               

               Conread position:
               61-735
               

               Cow position:
               chr10:53321375-53320710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               684
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 40
               

               Conread position:
               78-541
               

               Cow position:
               chr10:13839085-13839523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               144, 45
               

               Conread position:
               98-634
               

               Cow position:
               chr10:32429781-32430307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 160
               

               Conread position:
               113-717
               

               Cow position:
               chr10:55285014-55285616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               622
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 373
               

               Conread position:
               162-519
               

               Cow position:
               chr10:27269157-27268812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               214, 56
               

               Conread position:
               162-735
               

               Cow position:
               chr10:10583231-10583815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               586
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               221, 483
               

               Conread position:
               169-735
               

               Cow position:
               chr10:20382887-20382342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 26
               

               Conread position:
               170-662
               

               Cow position:
               chr10:29631677-29631185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               499
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 390
               

               Conread position:
               209-554
               

               Cow position:
               chr10:51774044-51773706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               187, 0
               

               Conread position:
               251-543
               

               Cow position:
               chr10:23439927-23439634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               114, 128
               

               Conread position:
               258-467
               

               Cow position:
               chr10:15368390-15368182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               88, 20
               

               Conread position:
               270-728
               

               Cow position:
               chr10:29101495-29101043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 46
               

               Conread position:
               291-712
               

               Cow position:
               chr10:20118373-20117963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               46, 11
               

               Conread position:
               338-678
               

               Cow position:
               chr10:41774316-41773981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               60, 167
               

               Conread position:
               378-720
               

               Cow position:
               chr10:19706302-19705957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 32
               

               Conread position:
               412-538
               

               Cow position:
               chr10:31539334-31539461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               460-731
               

               Cow position:
               chr10:25339521-25339785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               1-497
               

               Cow position:
               chr11:49840450-49840933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 52
               

               Conread position:
               1-731
               

               Cow position:
               chr11:9763155-9762457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               735
               

               Alignm identity:
               446
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               169, 73
               

               Conread position:
               1-735
               

               Cow position:
               chr11:26070464-26069709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               760
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 103
               

               Conread position:
               3-525
               

               Cow position:
               chr11:4056880-4056383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               523
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 0
               

               Conread position:
               7-712
               

               Cow position:
               chr11:15943746-15943059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               714
               

               Alignm identity:
               477
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 23
               

               Conread position:
               17-735
               

               Cow position:
               chr11:3855844-3856535 (view UCSC Genome Browser custom track)
               

               Alignm length:
               723
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               478, 125
               

               Conread position:
               32-735
               

               Cow position:
               chr11:13065335-13064651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               711
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               361, 34
               

               Conread position:
               176-519
               

               Cow position:
               chr11:14147697-14148037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               231
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               41, 74
               

               Conread position:
               179-735
               

               Cow position:
               chr11:87142353-87142914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 39
               

               Conread position:
               181-719
               

               Cow position:
               chr11:22939054-22938522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               551
               

               Alignm identity:
               354
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               140, 52
               

               Conread position:
               191-680
               

               Cow position:
               chr11:37285389-37285872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               390, 46
               

               Conread position:
               196-556
               

               Cow position:
               chr11:64962493-64962857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               210
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               20, 129
               

               Conread position:
               222-509
               

               Cow position:
               chr11:60823242-60823514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               230-712
               

               Cow position:
               chr11:26074141-26073654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               175, 19
               

               Conread position:
               265-735
               

               Cow position:
               chr11:67154546-67155011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               476
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 80
               

               Conread position:
               275-728
               

               Cow position:
               chr11:18070070-18069614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 70
               

               Conread position:
               288-601
               

               Cow position:
               chr11:21928305-21927998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               214
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               189, 115
               

               Conread position:
               327-516
               

               Cow position:
               chr11:31754451-31754642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               73, 182
               

               Conread position:
               335-661
               

               Cow position:
               chr11:54484350-54484026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 175
               

               Conread position:
               337-735
               

               Cow position:
               chr11:49239029-49238627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               267
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               59, 30
               

               Conread position:
               361-529
               

               Cow position:
               chr11:26146246-26146082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               31, 8
               

               Conread position:
               366-702
               

               Cow position:
               chr11:56487731-56488049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               122, 16
               

               Conread position:
               374-726
               

               Cow position:
               chr11:46779880-46779532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               237
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               34, 150
               

               Conread position:
               375-538
               

               Cow position:
               chr11:21444432-21444594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               49, 97
               

               Conread position:
               379-663
               

               Cow position:
               chr11:2833303-2833591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               125, 11
               

               Conread position:
               388-537
               

               Cow position:
               chr11:85210735-85210584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               389-568
               

               Cow position:
               chr11:82123232-82123063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               390-735
               

               Cow position:
               chr11:27669005-27668662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 52
               

               Conread position:
               391-662
               

               Cow position:
               chr11:65681396-65681666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               155, 78
               

               Conread position:
               398-700
               

               Cow position:
               chr11:51040608-51040903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               75, 68
               

               Conread position:
               428-656
               

               Cow position:
               chr11:81341243-81341020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               129, 56
               

               Conread position:
               1-699
               

               Cow position:
               chr12:11510412-11511068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               701
               

               Alignm identity:
               446
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               477, 108
               

               Conread position:
               91-704
               

               Cow position:
               chr12:11955963-11955348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               627
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               155, 58
               

               Conread position:
               98-502
               

               Cow position:
               chr12:47947482-47947081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               256
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               98-502
               

               Cow position:
               chr12:47971392-47970991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               176-456
               

               Cow position:
               chr12:38345356-38345070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               187, 100
               

               Conread position:
               210-694
               

               Cow position:
               chr12:1478146-1477675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 46
               

               Conread position:
               244-496
               

               Cow position:
               chr12:467100-466836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               102, 192
               

               Conread position:
               360-735
               

               Cow position:
               chr12:24433845-24433465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 217
               

               Conread position:
               1-570
               

               Cow position:
               chr13:57024361-57024916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               574
               

               Alignm identity:
               405
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 76
               

               Conread position:
               1-735
               

               Cow position:
               chr13:14178175-14177455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 80
               

               Conread position:
               8-550
               

               Cow position:
               chr13:44467130-44466595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 21
               

               Conread position:
               13-735
               

               Cow position:
               chr13:43590006-43590717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               729
               

               Alignm identity:
               507
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               386, 166
               

               Conread position:
               96-712
               

               Cow position:
               chr13:29517753-29518367 (view UCSC Genome Browser custom track)
               

               Alignm length:
               630
               

               Alignm identity:
               404
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 17
               

               Conread position:
               99-638
               

               Cow position:
               chr13:5778229-5778763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               297, 38
               

               Conread position:
               137-734
               

               Cow position:
               chr13:11794246-11793679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               397
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 80
               

               Conread position:
               166-697
               

               Cow position:
               chr13:21720705-21721234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               547
               

               Alignm identity:
               344
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               82, 105
               

               Conread position:
               169-735
               

               Cow position:
               chr13:22184510-22183941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               590
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 42
               

               Conread position:
               215-735
               

               Cow position:
               chr13:11738795-11739313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               216-735
               

               Cow position:
               chr13:50661180-50661674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               329, 6
               

               Conread position:
               302-735
               

               Cow position:
               chr13:26777102-26777518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               294
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               29, 75
               

               Conread position:
               368-737
               

               Cow position:
               chr13:34764800-34764438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               40, 77
               

               Conread position:
               379-713
               

               Cow position:
               chr13:34096922-34096586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               223
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               44, 40
               

               Conread position:
               1-673
               

               Cow position:
               chr14:29580711-29581356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               679
               

               Alignm identity:
               469
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 31
               

               Conread position:
               1-735
               

               Cow position:
               chr14:12610987-12611685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               744
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               185, 148
               

               Conread position:
               1-735
               

               Cow position:
               chr14:21744644-21745353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               742
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 52
               

               Conread position:
               1-735
               

               Cow position:
               chr14:45711177-45710464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               739
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               582, 10
               

               Conread position:
               5-736
               

               Cow position:
               chr14:44226940-44227653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               740
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               345, 130
               

               Conread position:
               10-627
               

               Cow position:
               chr14:30666048-30666644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               628
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 19
               

               Conread position:
               11-654
               

               Cow position:
               chr14:44775490-44774857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               645
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 131
               

               Conread position:
               98-735
               

               Cow position:
               chr14:45678443-45677812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               473
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               245, 65
               

               Conread position:
               164-741
               

               Cow position:
               chr14:18105149-18105701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 23
               

               Conread position:
               188-638
               

               Cow position:
               chr14:48402426-48401986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 46
               

               Conread position:
               201-658
               

               Cow position:
               chr14:44256021-44255572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 225
               

               Conread position:
               227-732
               

               Cow position:
               chr14:13833913-13834412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 102
               

               Conread position:
               245-658
               

               Cow position:
               chr14:35385033-35384631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 100
               

               Conread position:
               278-694
               

               Cow position:
               chr14:13579207-13579619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 138
               

               Conread position:
               322-605
               

               Cow position:
               chr14:44292070-44292355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               259, 0
               

               Conread position:
               340-708
               

               Cow position:
               chr14:19056672-19056317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               16, 55
               

               Conread position:
               342-561
               

               Cow position:
               chr14:28244794-28244577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               168
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               378-736
               

               Cow position:
               chr14:47643213-47643567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 96
               

               Conread position:
               383-735
               

               Cow position:
               chr14:11561784-11562111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               336, 22
               

               Conread position:
               416-735
               

               Cow position:
               chr14:44380296-44380621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               85, 198
               

               Conread position:
               419-735
               

               Cow position:
               chr14:35364874-35364556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               215
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               137, 52
               

               Conread position:
               1-507
               

               Cow position:
               chr15:5207429-5207923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               500, 58
               

               Conread position:
               1-684
               

               Cow position:
               chr15:33797961-33797286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               701
               

               Alignm identity:
               447
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               1-707
               

               Cow position:
               chr15:7965408-7964702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               729
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 147
               

               Conread position:
               1-735
               

               Cow position:
               chr15:5980887-5981630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               521
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 133
               

               Conread position:
               1-735
               

               Cow position:
               chr15:21450202-21450959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               765
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 310
               

               Conread position:
               1-735
               

               Cow position:
               chr15:35647129-35646411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               518
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 73
               

               Conread position:
               2-735
               

               Cow position:
               chr15:6079293-6080016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               741
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               144, 116
               

               Conread position:
               44-534
               

               Cow position:
               chr15:9430510-9431006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               507
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 236
               

               Conread position:
               138-488
               

               Cow position:
               chr15:19232578-19232234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               21, 43
               

               Conread position:
               164-486
               

               Cow position:
               chr15:13677238-13677539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               236
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               240, 21
               

               Conread position:
               166-684
               

               Cow position:
               chr15:16287230-16286724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 19
               

               Conread position:
               191-649
               

               Cow position:
               chr15:50954832-50955275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               128, 19
               

               Conread position:
               243-735
               

               Cow position:
               chr15:3182285-3181794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               503
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 15
               

               Conread position:
               244-574
               

               Cow position:
               chr15:12026952-12027287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               10, 53
               

               Conread position:
               266-737
               

               Cow position:
               chr15:17217322-17216873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 18
               

               Conread position:
               276-712
               

               Cow position:
               chr15:3777863-3777440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 69
               

               Conread position:
               307-666
               

               Cow position:
               chr15:40386744-40387094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               75, 22
               

               Conread position:
               335-694
               

               Cow position:
               chr15:33642970-33642604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               45, 14
               

               Conread position:
               360-735
               

               Cow position:
               chr15:9003313-9002949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 112
               

               Conread position:
               375-734
               

               Cow position:
               chr15:4108399-4108036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               30, 98
               

               Conread position:
               384-712
               

               Cow position:
               chr15:22240067-22239740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               199, 26
               

               Conread position:
               421-731
               

               Cow position:
               chr15:24288511-24288207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               427-735
               

               Cow position:
               chr15:53339186-53339496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 156
               

               Conread position:
               1-497
               

               Cow position:
               chr16:56916869-56916378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               501
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               317, 141
               

               Conread position:
               1-614
               

               Cow position:
               chr16:37455824-37455202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               429
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 165
               

               Conread position:
               1-732
               

               Cow position:
               chr16:27786239-27786973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               395, 19
               

               Conread position:
               1-735
               

               Cow position:
               chr16:12668569-12667849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               750
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 12
               

               Conread position:
               1-735
               

               Cow position:
               chr16:43897080-43896331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               539
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 597
               

               Conread position:
               2-488
               

               Cow position:
               chr16:54696911-54697408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               508
               

               Alignm identity:
               334
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               3-735
               

               Cow position:
               chr16:1860420-1861166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               758
               

               Alignm identity:
               515
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               388, 97
               

               Conread position:
               25-662
               

               Cow position:
               chr16:11782169-11781542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               650
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 58
               

               Conread position:
               103-735
               

               Cow position:
               chr16:16897758-16898384 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               445
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 31
               

               Conread position:
               127-581
               

               Cow position:
               chr16:3828947-3828516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               220, 15
               

               Conread position:
               136-571
               

               Cow position:
               chr16:23808668-23809083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               169-735
               

               Cow position:
               chr16:39824299-39824851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               573
               

               Alignm identity:
               411
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 49
               

               Conread position:
               172-732
               

               Cow position:
               chr16:13410302-13410862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               369
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 298
               

               Conread position:
               201-610
               

               Cow position:
               chr16:6934227-6933793 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               125, 216
               

               Conread position:
               255-654
               

               Cow position:
               chr16:8648406-8648795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               257
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               269-735
               

               Cow position:
               chr16:48334107-48333662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 151
               

               Conread position:
               270-735
               

               Cow position:
               chr16:16520290-16519840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 18
               

               Conread position:
               367-735
               

               Cow position:
               chr16:1960051-1959691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               216, 88
               

               Conread position:
               372-735
               

               Cow position:
               chr16:41571957-41572324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 86
               

               Conread position:
               412-735
               

               Cow position:
               chr16:28158163-28158498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               231
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               158, 140
               

               Conread position:
               417-708
               

               Cow position:
               chr16:4771446-4771734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               139, 91
               

               Conread position:
               437-661
               

               Cow position:
               chr16:29208539-29208324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               455-735
               

               Cow position:
               chr16:27005699-27005961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-699
               

               Cow position:
               chr17:20081099-20080412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               706
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               223, 32
               

               Conread position:
               1-735
               

               Cow position:
               chr17:3708015-3707288 (view UCSC Genome Browser custom track)
               

               Alignm length:
               752
               

               Alignm identity:
               506
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 55
               

               Conread position:
               1-735
               

               Cow position:
               chr17:7942291-7941572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               745
               

               Alignm identity:
               478
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               219, 135
               

               Conread position:
               24-658
               

               Cow position:
               chr17:17067047-17067651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               637
               

               Alignm identity:
               415
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 51
               

               Conread position:
               91-735
               

               Cow position:
               chr17:2078142-2077487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               660
               

               Alignm identity:
               458
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               137, 72
               

               Conread position:
               172-530
               

               Cow position:
               chr17:42266362-42266698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 28
               

               Conread position:
               186-519
               

               Cow position:
               chr17:23919233-23919558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 83
               

               Conread position:
               361-723
               

               Cow position:
               chr17:19899151-19899517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               44, 268
               

               Conread position:
               365-736
               

               Cow position:
               chr17:38875623-38875988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               248
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               40, 84
               

               Conread position:
               387-712
               

               Cow position:
               chr17:31534018-31534332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 54
               

               Conread position:
               408-735
               

               Cow position:
               chr17:22133424-22133771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               148, 95
               

               Conread position:
               428-684
               

               Cow position:
               chr17:20489519-20489767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               1-735
               

               Cow position:
               chr18:15856219-15856910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               740
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 71
               

               Conread position:
               7-705
               

               Cow position:
               chr18:25961438-25960738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               724
               

               Alignm identity:
               440
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               7-705
               

               Cow position:
               chr18:33142237-33142921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               706
               

               Alignm identity:
               437
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 46
               

               Conread position:
               14-675
               

               Cow position:
               chr18:29046963-29046303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               687
               

               Alignm identity:
               454
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 29
               

               Conread position:
               33-544
               

               Cow position:
               chr18:36782173-36782660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               516
               

               Alignm identity:
               329
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               7, 28
               

               Conread position:
               98-581
               

               Cow position:
               chr18:37753849-37754322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               492
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               46, 37
               

               Conread position:
               114-654
               

               Cow position:
               chr18:40345307-40344768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               552
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               118, 28
               

               Conread position:
               245-736
               

               Cow position:
               chr18:34043831-34044310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               493
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 30
               

               Conread position:
               271-630
               

               Cow position:
               chr18:16137603-16137251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 86
               

               Conread position:
               309-519
               

               Cow position:
               chr18:46634011-46633796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               335-681
               

               Cow position:
               chr18:18450395-18450053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               338-634
               

               Cow position:
               chr18:5079168-5078877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               135, 58
               

               Conread position:
               362-538
               

               Cow position:
               chr18:18528539-18528705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               105, 45
               

               Conread position:
               379-662
               

               Cow position:
               chr18:37558899-37559177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               184, 27
               

               Conread position:
               393-732
               

               Cow position:
               chr18:14421654-14421986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               66, 46
               

               Conread position:
               396-661
               

               Cow position:
               chr18:56428966-56428717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               449-735
               

               Cow position:
               chr18:36110687-36110401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               131, 73
               

               Conread position:
               1-476
               

               Cow position:
               chr19:48861223-48860755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               479
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 195
               

               Conread position:
               3-734
               

               Cow position:
               chr19:35384623-35383897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               740
               

               Alignm identity:
               532
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               266, 10
               

               Conread position:
               77-668
               

               Cow position:
               chr19:256312-256915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               607
               

               Alignm identity:
               412
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 460
               

               Conread position:
               80-734
               

               Cow position:
               chr19:30756277-30756930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               664
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 62
               

               Conread position:
               103-479
               

               Cow position:
               chr19:12679104-12678716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               246
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               123, 197
               

               Conread position:
               201-712
               

               Cow position:
               chr19:376540-376031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               528
               

               Alignm identity:
               341
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               66, 21
               

               Conread position:
               229-530
               

               Cow position:
               chr19:36262889-36262593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               201
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               86, 29
               

               Conread position:
               338-735
               

               Cow position:
               chr19:264966-265372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 99
               

               Conread position:
               342-712
               

               Cow position:
               chr19:40794920-40794553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               390-731
               

               Cow position:
               chr19:32181676-32181345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               198, 22
               

               Conread position:
               434-729
               

               Cow position:
               chr19:5766259-5766544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               1-489
               

               Cow position:
               chr2:22322598-22323068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               305
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               23, 87
               

               Conread position:
               1-600
               

               Cow position:
               chr2:27085685-27085128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               601
               

               Alignm identity:
               370
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               406, 143
               

               Conread position:
               1-634
               

               Cow position:
               chr2:40453337-40453951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               641
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 62
               

               Conread position:
               1-701
               

               Cow position:
               chr2:1691398-1692088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               711
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 147
               

               Conread position:
               1-701
               

               Cow position:
               chr2:44990880-44990174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               721
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 10
               

               Conread position:
               1-730
               

               Cow position:
               chr2:40827538-40828266 (view UCSC Genome Browser custom track)
               

               Alignm length:
               751
               

               Alignm identity:
               450
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               20, 27
               

               Conread position:
               1-735
               

               Cow position:
               chr2:78743014-78743721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               582, 162
               

               Conread position:
               2-731
               

               Cow position:
               chr2:28640431-28639693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               748
               

               Alignm identity:
               492
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 527
               

               Conread position:
               23-735
               

               Cow position:
               chr2:32656101-32656798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               718
               

               Alignm identity:
               480
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               380, 123
               

               Conread position:
               29-659
               

               Cow position:
               chr2:44966052-44966668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               396
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               29-732
               

               Cow position:
               chr2:20029867-20030574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               724
               

               Alignm identity:
               463
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               180, 23
               

               Conread position:
               32-564
               

               Cow position:
               chr2:32372925-32372408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               372, 14
               

               Conread position:
               44-735
               

               Cow position:
               chr2:44934506-44933828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               700
               

               Alignm identity:
               479
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 102
               

               Conread position:
               56-735
               

               Cow position:
               chr2:42332408-42331729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               695
               

               Alignm identity:
               475
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 91
               

               Conread position:
               98-574
               

               Cow position:
               chr2:41779745-41780212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               481
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 51
               

               Conread position:
               166-510
               

               Cow position:
               chr2:1644956-1645296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               168, 44
               

               Conread position:
               176-514
               

               Cow position:
               chr2:19077384-19077715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               182, 42
               

               Conread position:
               191-730
               

               Cow position:
               chr2:24152016-24152534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               350
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               205, 29
               

               Conread position:
               218-701
               

               Cow position:
               chr2:19225519-19225992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 161
               

               Conread position:
               229-515
               

               Cow position:
               chr2:20901440-20901150 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               58, 37
               

               Conread position:
               302-735
               

               Cow position:
               chr2:6880080-6880530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 56
               

               Conread position:
               320-712
               

               Cow position:
               chr2:24471885-24471489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 38
               

               Conread position:
               360-736
               

               Cow position:
               chr2:64768399-64768029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 47
               

               Conread position:
               375-735
               

               Cow position:
               chr2:54693747-54694098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 56
               

               Conread position:
               391-661
               

               Cow position:
               chr2:49631331-49631592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               410-736
               

               Cow position:
               chr2:31448676-31448999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               144, 0
               

               Conread position:
               425-735
               

               Cow position:
               chr2:72906374-72906054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               132, 42
               

               Conread position:
               1-532
               

               Cow position:
               chr20:14870009-14869492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               534
               

               Alignm identity:
               384
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               233, 51
               

               Conread position:
               1-552
               

               Cow position:
               chr20:32215973-32216503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               553
               

               Alignm identity:
               346
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               411, 61
               

               Conread position:
               1-694
               

               Cow position:
               chr20:19355708-19356396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               699
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               350, 141
               

               Conread position:
               2-528
               

               Cow position:
               chr20:5791299-5791794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 70
               

               Conread position:
               17-718
               

               Cow position:
               chr20:18323962-18323304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               704
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 51
               

               Conread position:
               41-735
               

               Cow position:
               chr20:13499091-13499786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               710
               

               Alignm identity:
               534
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 104
               

               Conread position:
               87-592
               

               Cow position:
               chr20:22210080-22210566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               510
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 26
               

               Conread position:
               107-739
               

               Cow position:
               chr20:20753723-20753122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               640
               

               Alignm identity:
               409
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               37, 29
               

               Conread position:
               177-737
               

               Cow position:
               chr20:36702511-36703070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               357
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 63
               

               Conread position:
               290-694
               

               Cow position:
               chr20:30971274-30971671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               257
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               225, 94
               

               Conread position:
               324-732
               

               Cow position:
               chr20:18107780-18108177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               20, 49
               

               Conread position:
               326-613
               

               Cow position:
               chr20:33182874-33182594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               143, 84
               

               Conread position:
               338-735
               

               Cow position:
               chr20:13769140-13769525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 24
               

               Conread position:
               398-712
               

               Cow position:
               chr20:41364296-41363985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               226
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               256, 36
               

               Conread position:
               1-523
               

               Cow position:
               chr21:10283959-10284465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               532
               

               Alignm identity:
               336
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               21, 28
               

               Conread position:
               1-656
               

               Cow position:
               chr21:3169451-3170084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               659
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               366, 141
               

               Conread position:
               1-668
               

               Cow position:
               chr21:38091398-38092043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               675
               

               Alignm identity:
               412
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               172, 61
               

               Conread position:
               1-735
               

               Cow position:
               chr21:2540025-2539287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               764
               

               Alignm identity:
               504
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 61
               

               Conread position:
               6-732
               

               Cow position:
               chr21:1075126-1075847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               466
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 68
               

               Conread position:
               17-571
               

               Cow position:
               chr21:1778662-1779215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               570
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               140, 10
               

               Conread position:
               29-735
               

               Cow position:
               chr21:47942030-47942736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               716
               

               Alignm identity:
               500
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 198
               

               Conread position:
               77-603
               

               Cow position:
               chr21:4716147-4716676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               169, 138
               

               Conread position:
               171-730
               

               Cow position:
               chr21:963619-964190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               358
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               127, 69
               

               Conread position:
               222-561
               

               Cow position:
               chr21:40080681-40081012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               253, 73
               

               Conread position:
               335-732
               

               Cow position:
               chr21:41404699-41405104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 304
               

               Conread position:
               361-735
               

               Cow position:
               chr21:28613736-28614119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 282
               

               Conread position:
               379-714
               

               Cow position:
               chr21:21024901-21025227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1-532
               

               Cow position:
               chr22:2395112-2394575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               381
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 54
               

               Conread position:
               1-719
               

               Cow position:
               chr22:1281848-1281131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               739
               

               Alignm identity:
               519
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 61
               

               Conread position:
               1-733
               

               Cow position:
               chr22:290820-290085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               744
               

               Alignm identity:
               553
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               360, 474
               

               Conread position:
               1-736
               

               Cow position:
               chr22:4242736-4242015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               747
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 39
               

               Conread position:
               2-726
               

               Cow position:
               chr22:8737446-8736737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               738
               

               Alignm identity:
               503
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               226, 140
               

               Conread position:
               6-525
               

               Cow position:
               chr22:6602321-6601838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               520
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               53-629
               

               Cow position:
               chr22:35916079-35915516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               584
               

               Alignm identity:
               364
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               124, 83
               

               Conread position:
               103-735
               

               Cow position:
               chr22:1268773-1268133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               647
               

               Alignm identity:
               441
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 25
               

               Conread position:
               105-617
               

               Cow position:
               chr22:8121097-8120585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               521
               

               Alignm identity:
               364
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 366
               

               Conread position:
               194-735
               

               Cow position:
               chr22:33351755-33352281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               546
               

               Alignm identity:
               365
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 128
               

               Conread position:
               222-501
               

               Cow position:
               chr22:23945307-23945039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               38, 103
               

               Conread position:
               239-595
               

               Cow position:
               chr22:38550512-38550864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               108, 30
               

               Conread position:
               335-660
               

               Cow position:
               chr22:4066316-4065999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               248, 71
               

               Conread position:
               337-536
               

               Cow position:
               chr22:2718858-2718662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               158, 76
               

               Conread position:
               366-735
               

               Cow position:
               chr22:30128837-30129200 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 18
               

               Conread position:
               366-735
               

               Cow position:
               chr22:30146486-30146849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 18
               

               Conread position:
               439-672
               

               Cow position:
               chr22:9045594-9045824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               120, 62
               

               Conread position:
               1-525
               

               Cow position:
               chr23:38581609-38582099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 120
               

               Conread position:
               1-660
               

               Cow position:
               chr23:11077325-11076647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               688
               

               Alignm identity:
               482
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               134, 52
               

               Conread position:
               1-673
               

               Cow position:
               chr23:13511993-13512651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               676
               

               Alignm identity:
               459
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 141
               

               Conread position:
               1-719
               

               Cow position:
               chr23:3180869-3181584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               734
               

               Alignm identity:
               450
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               160, 53
               

               Conread position:
               1-735
               

               Cow position:
               chr23:5873696-5872956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               744
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 73
               

               Conread position:
               89-592
               

               Cow position:
               chr23:35432360-35431872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               512
               

               Alignm identity:
               326
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               14, 147
               

               Conread position:
               107-711
               

               Cow position:
               chr23:29647322-29646747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               613
               

               Alignm identity:
               373
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               249, 35
               

               Conread position:
               113-735
               

               Cow position:
               chr23:30237261-30237900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               643
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               282, 301
               

               Conread position:
               270-736
               

               Cow position:
               chr23:16614025-16613571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               117, 6
               

               Conread position:
               335-735
               

               Cow position:
               chr23:2440041-2439674 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               193, 22
               

               Conread position:
               380-540
               

               Cow position:
               chr23:22942731-22942573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               16, 43
               

               Conread position:
               392-552
               

               Cow position:
               chr23:12266084-12266244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               96, 32
               

               Conread position:
               411-712
               

               Cow position:
               chr23:17878469-17878168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               99, 149
               

               Conread position:
               1-474
               

               Cow position:
               chr24:7090000-7089530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               480
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               115, 83
               

               Conread position:
               1-488
               

               Cow position:
               chr24:11938954-11938465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 29
               

               Conread position:
               1-602
               

               Cow position:
               chr24:25577358-25576781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               610
               

               Alignm identity:
               379
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               16, 29
               

               Conread position:
               1-732
               

               Cow position:
               chr24:25467649-25466943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 16
               

               Conread position:
               3-735
               

               Cow position:
               chr24:38638509-38639224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               735
               

               Alignm identity:
               501
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               211, 146
               

               Conread position:
               6-732
               

               Cow position:
               chr24:5888267-5887551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               741
               

               Alignm identity:
               484
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 81
               

               Conread position:
               9-694
               

               Cow position:
               chr24:6675592-6676245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               692
               

               Alignm identity:
               444
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 126
               

               Conread position:
               33-661
               

               Cow position:
               chr24:35841069-35840458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               476
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               124, 317
               

               Conread position:
               54-662
               

               Cow position:
               chr24:29408681-29408073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               620
               

               Alignm identity:
               407
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               265, 80
               

               Conread position:
               62-734
               

               Cow position:
               chr24:35869526-35868880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               674
               

               Alignm identity:
               465
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 103
               

               Conread position:
               103-732
               

               Cow position:
               chr24:17204057-17203428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               649
               

               Alignm identity:
               412
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               211, 33
               

               Conread position:
               142-735
               

               Cow position:
               chr24:40470254-40469665 (view UCSC Genome Browser custom track)
               

               Alignm length:
               608
               

               Alignm identity:
               388
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               189, 22
               

               Conread position:
               179-586
               

               Cow position:
               chr24:17425581-17425184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               125, 14
               

               Conread position:
               182-735
               

               Cow position:
               chr24:9435791-9435243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 76
               

               Conread position:
               301-723
               

               Cow position:
               chr24:32847296-32847706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 21
               

               Conread position:
               306-735
               

               Cow position:
               chr24:12205060-12204638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               250, 87
               

               Conread position:
               335-689
               

               Cow position:
               chr24:17279084-17278728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               59, 233
               

               Conread position:
               1-735
               

               Cow position:
               chr25:18273840-18273117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               742
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               149, 58
               

               Conread position:
               2-569
               

               Cow position:
               chr25:32901846-32902414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               581
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 74
               

               Conread position:
               31-538
               

               Cow position:
               chr25:3973993-3974498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               519
               

               Alignm identity:
               330
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               76, 64
               

               Conread position:
               64-621
               

               Cow position:
               chr25:13454589-13454038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               564
               

               Alignm identity:
               422
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 126
               

               Conread position:
               104-701
               

               Cow position:
               chr25:17655471-17656055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               603
               

               Alignm identity:
               420
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               172-712
               

               Cow position:
               chr25:26732100-26732622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               549
               

               Alignm identity:
               345
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               25, 47
               

               Conread position:
               210-529
               

               Cow position:
               chr25:4107820-4108132 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               39, 27
               

               Conread position:
               246-532
               

               Cow position:
               chr25:30314350-30314066 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               95, 78
               

               Conread position:
               315-530
               

               Cow position:
               chr25:16431924-16431708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               91, 7
               

               Conread position:
               418-732
               

               Cow position:
               chr25:30157767-30157469 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 30
               

               Conread position:
               430-735
               

               Cow position:
               chr25:18450703-18451003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               230, 87
               

               Conread position:
               6-701
               

               Cow position:
               chr26:1626931-1627625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               710
               

               Alignm identity:
               468
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 73
               

               Conread position:
               39-735
               

               Cow position:
               chr26:6806102-6805387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               724
               

               Alignm identity:
               495
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 66
               

               Conread position:
               95-712
               

               Cow position:
               chr26:16885989-16886599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               633
               

               Alignm identity:
               390
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 154
               

               Conread position:
               113-474
               

               Cow position:
               chr26:8086224-8086577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 124
               

               Conread position:
               120-735
               

               Cow position:
               chr26:4328385-4327768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               635
               

               Alignm identity:
               431
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 22
               

               Conread position:
               162-673
               

               Cow position:
               chr26:12666600-12667110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               370
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               365, 71
               

               Conread position:
               189-678
               

               Cow position:
               chr26:19205022-19205496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               496
               

               Alignm identity:
               315
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               297, 110
               

               Conread position:
               328-701
               

               Cow position:
               chr26:20224612-20224976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               390-735
               

               Cow position:
               chr26:16478658-16479005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 246
               

               Conread position:
               430-648
               

               Cow position:
               chr26:9843326-9843103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               134, 208
               

               Conread position:
               1-538
               

               Cow position:
               chr27:2377413-2377930 (view UCSC Genome Browser custom track)
               

               Alignm length:
               544
               

               Alignm identity:
               355
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 28
               

               Conread position:
               6-694
               

               Cow position:
               chr27:1575491-1576178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               701
               

               Alignm identity:
               450
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 142
               

               Conread position:
               164-735
               

               Cow position:
               chr27:15275017-15274447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               579
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 118
               

               Conread position:
               221-539
               

               Cow position:
               chr27:2622013-2622328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               184, 23
               

               Conread position:
               229-732
               

               Cow position:
               chr27:30911345-30911847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               513
               

               Alignm identity:
               337
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               295, 29
               

               Conread position:
               297-712
               

               Cow position:
               chr27:22150125-22150542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               13, 33
               

               Conread position:
               374-712
               

               Cow position:
               chr27:8589982-8590298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               110, 19
               

               Conread position:
               375-679
               

               Cow position:
               chr27:27415111-27415400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               202
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               396-694
               

               Cow position:
               chr27:22673330-22673617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               95, 14
               

               Conread position:
               1-662
               

               Cow position:
               chr28:12180145-12179502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               673
               

               Alignm identity:
               440
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 87
               

               Conread position:
               1-735
               

               Cow position:
               chr28:5799227-5799956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               741
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 141
               

               Conread position:
               1-735
               

               Cow position:
               chr28:8720017-8719291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               747
               

               Alignm identity:
               520
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 140
               

               Conread position:
               1-735
               

               Cow position:
               chr28:10646474-10645772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               736
               

               Alignm identity:
               474
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               316, 43
               

               Conread position:
               2-728
               

               Cow position:
               chr28:18146799-18146087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               736
               

               Alignm identity:
               491
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               395, 93
               

               Conread position:
               134-735
               

               Cow position:
               chr28:21566514-21567105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               614
               

               Alignm identity:
               421
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 8
               

               Conread position:
               164-735
               

               Cow position:
               chr28:25169017-25168484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               575
               

               Alignm identity:
               380
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               254-511
               

               Cow position:
               chr28:25770087-25770342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               153, 97
               

               Conread position:
               363-719
               

               Cow position:
               chr28:10615700-10615353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               42, 48
               

               Conread position:
               379-712
               

               Cow position:
               chr28:8784627-8784954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 93
               

               Conread position:
               409-732
               

               Cow position:
               chr28:25501148-25500824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               57, 147
               

               Conread position:
               418-736
               

               Cow position:
               chr28:698628-698942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               165, 23
               

               Conread position:
               430-732
               

               Cow position:
               chr28:24558963-24559262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               206
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               39, 13
               

               Conread position:
               1-735
               

               Cow position:
               chr29:23977015-23977752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               535
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 245
               

               Conread position:
               1-736
               

               Cow position:
               chr29:8664405-8665135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               497
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               114, 142
               

               Conread position:
               3-735
               

               Cow position:
               chr29:2747535-2746833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               738
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 111
               

               Conread position:
               196-734
               

               Cow position:
               chr29:26461153-26460633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               542
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 28
               

               Conread position:
               300-735
               

               Cow position:
               chr29:36635196-36634754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               338-570
               

               Cow position:
               chr29:21265944-21266171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               131, 7
               

               Conread position:
               360-735
               

               Cow position:
               chr29:4633371-4633004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               363-735
               

               Cow position:
               chr29:27262465-27262083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               270
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 155
               

               Conread position:
               406-694
               

               Cow position:
               chr29:4516861-4517149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 63
               

               Conread position:
               1-735
               

               Cow position:
               chr6:7178443-7177711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               747
               

               Alignm identity:
               527
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               121, 225
               

               Conread position:
               1-735
               

               Cow position:
               chr6:10644594-10645308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               745
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 42
               

               Conread position:
               1-735
               

               Cow position:
               chr6:44262639-44261891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               761
               

               Alignm identity:
               512
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 41
               

               Conread position:
               6-729
               

               Cow position:
               chr6:4508482-4509163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               730
               

               Alignm identity:
               446
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               219, 107
               

               Conread position:
               7-540
               

               Cow position:
               chr6:62095579-62095029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               383
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 135
               

               Conread position:
               30-735
               

               Cow position:
               chr6:10632437-10633127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               710
               

               Alignm identity:
               517
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 135
               

               Conread position:
               44-735
               

               Cow position:
               chr6:58065635-58066303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               693
               

               Alignm identity:
               486
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               104, 98
               

               Conread position:
               113-519
               

               Cow position:
               chr6:14761946-14761553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 35
               

               Conread position:
               116-735
               

               Cow position:
               chr6:27332963-27333576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               631
               

               Alignm identity:
               410
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 44
               

               Conread position:
               278-661
               

               Cow position:
               chr6:6156677-6157059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               118, 40
               

               Conread position:
               290-525
               

               Cow position:
               chr6:87783-88016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 0
               

               Conread position:
               300-736
               

               Cow position:
               chr6:63465769-63465341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               360-583
               

               Cow position:
               chr6:30677075-30676860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               362-735
               

               Cow position:
               chr6:47625282-47625650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 37
               

               Conread position:
               384-708
               

               Cow position:
               chr6:12626942-12627263 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               228
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               95, 35
               

               Conread position:
               410-735
               

               Cow position:
               chr6:50636133-50636459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               130, 61
               

               Conread position:
               1-482
               

               Cow position:
               chr8:47887020-47887478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               484
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 101
               

               Conread position:
               1-523
               

               Cow position:
               chr8:49859632-49859117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               529
               

               Alignm identity:
               379
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 64
               

               Conread position:
               1-530
               

               Cow position:
               chr8:38606072-38605554 (view UCSC Genome Browser custom track)
               

               Alignm length:
               537
               

               Alignm identity:
               386
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 212
               

               Conread position:
               1-565
               

               Cow position:
               chr8:56487599-56487063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               387, 85
               

               Conread position:
               1-719
               

               Cow position:
               chr8:45691891-45691174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               734
               

               Alignm identity:
               494
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 135
               

               Conread position:
               1-735
               

               Cow position:
               chr8:42158856-42158153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               739
               

               Alignm identity:
               488
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               569, 221
               

               Conread position:
               1-735
               

               Cow position:
               chr8:42656839-42656127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               737
               

               Alignm identity:
               493
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               449, 43
               

               Conread position:
               1-735
               

               Cow position:
               chr8:47673980-47674701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               740
               

               Alignm identity:
               510
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               168, 141
               

               Conread position:
               1-735
               

               Cow position:
               chr8:47783665-47782956 (view UCSC Genome Browser custom track)
               

               Alignm length:
               742
               

               Alignm identity:
               496
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 67
               

               Conread position:
               1-741
               

               Cow position:
               chr8:21584361-21585058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               748
               

               Alignm identity:
               499
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               555, 196
               

               Conread position:
               2-525
               

               Cow position:
               chr8:5681921-5681411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               533
               

               Alignm identity:
               362
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 57
               

               Conread position:
               57-735
               

               Cow position:
               chr8:21230274-21230949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               692
               

               Alignm identity:
               461
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               100, 15
               

               Conread position:
               62-694
               

               Cow position:
               chr8:51857176-51857791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               653
               

               Alignm identity:
               428
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 206
               

               Conread position:
               95-649
               

               Cow position:
               chr8:46948938-46949533 (view UCSC Genome Browser custom track)
               

               Alignm length:
               597
               

               Alignm identity:
               409
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               251, 93
               

               Conread position:
               138-669
               

               Cow position:
               chr8:30496291-30495783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               535
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 11
               

               Conread position:
               164-735
               

               Cow position:
               chr8:23135318-23134736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               591
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 80
               

               Conread position:
               169-604
               

               Cow position:
               chr8:15409099-15409522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               177, 10
               

               Conread position:
               248-653
               

               Cow position:
               chr8:49697611-49697210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 12
               

               Conread position:
               262-621
               

               Cow position:
               chr8:46539026-46538675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               134, 40
               

               Conread position:
               337-573
               

               Cow position:
               chr8:27644275-27644508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               219, 46
               

               Conread position:
               353-712
               

               Cow position:
               chr8:51507355-51507000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               242
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               355-732
               

               Cow position:
               chr8:34269240-34269627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               12, 65
               

               Conread position:
               357-662
               

               Cow position:
               chr8:20135960-20135654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               211
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               18, 62
               

               Conread position:
               362-700
               

               Cow position:
               chr8:32648000-32648324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 52
               

               Conread position:
               388-735
               

               Cow position:
               chr8:44700507-44700847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 146
               

               Conread position:
               440-735
               

               Cow position:
               chr8:38584552-38584253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               448-735
               

               Cow position:
               chr8:20278467-20278731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               1-525
               

               Cow position:
               chr9:32296459-32295951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               530
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 31
               

               Conread position:
               1-634
               

               Cow position:
               chr9:3763783-3764403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               639
               

               Alignm identity:
               433
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 73
               

               Conread position:
               1-732
               

               Cow position:
               chr9:46271919-46272640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               747
               

               Alignm identity:
               467
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               391, 87
               

               Conread position:
               1-733
               

               Cow position:
               chr9:4282756-4283476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               746
               

               Alignm identity:
               511
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               348, 37
               

               Conread position:
               1-736
               

               Cow position:
               chr9:50698084-50698815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               743
               

               Alignm identity:
               513
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               162, 146
               

               Conread position:
               101-525
               

               Cow position:
               chr9:3372409-3372020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               285
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               301, 63
               

               Conread position:
               142-519
               

               Cow position:
               chr9:8284143-8283772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 77
               

               Conread position:
               180-506
               

               Cow position:
               chr9:20308050-20307722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 120
               

               Conread position:
               195-735
               

               Cow position:
               chr9:26083578-26083042 (view UCSC Genome Browser custom track)
               

               Alignm length:
               556
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 19
               

               Conread position:
               210-526
               

               Cow position:
               chr9:46263377-46263058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               57, 174
               

               Conread position:
               241-708
               

               Cow position:
               chr9:21110558-21111017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               474
               

               Alignm identity:
               304
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               160, 10
               

               Conread position:
               255-509
               

               Cow position:
               chr9:26736787-26737044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 216
               

               Conread position:
               260-576
               

               Cow position:
               chr9:4836301-4835984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 200
               

               Conread position:
               336-735
               

               Cow position:
               chr9:9562925-9562531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               354-712
               

               Cow position:
               chr9:12725137-12725477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               236
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               344, 53
Conread position:	1-500
Cow position:	chr1:18139518-18139043 (view UCSC Genome Browser custom track)
Alignm length:	511
Alignm identity:	348
Alignm E-value:	0
Alignm gaps (pig, cow):	217, 16
Conread position:	1-518
Cow position:	chr1:5548823-5548307 (view UCSC Genome Browser custom track)
Alignm length:	529
Alignm identity:	334
Alignm E-value:	6e-40
Alignm gaps (pig, cow):	96, 75
Conread position:	1-531
Cow position:	chr1:65923757-65923218 (view UCSC Genome Browser custom track)
Alignm length:	552
Alignm identity:	355
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	233, 26
Conread position:	1-655
Cow position:	chr1:67292564-67293210 (view UCSC Genome Browser custom track)
Alignm length:	660
Alignm identity:	423
Alignm E-value:	0
Alignm gaps (pig, cow):	158, 148
Conread position:	1-683
Cow position:	chr1:32908754-32909440 (view UCSC Genome Browser custom track)
Alignm length:	712
Alignm identity:	485
Alignm E-value:	0
Alignm gaps (pig, cow):	192, 56
Conread position:	1-732
Cow position:	chr1:79111422-79112129 (view UCSC Genome Browser custom track)
Alignm length:	737
Alignm identity:	502
Alignm E-value:	0
Alignm gaps (pig, cow):	253, 175
Conread position:	1-735
Cow position:	chr1:40512078-40511350 (view UCSC Genome Browser custom track)
Alignm length:	748
Alignm identity:	514
Alignm E-value:	0
Alignm gaps (pig, cow):	136, 43
Conread position:	2-735
Cow position:	chr1:73198090-73197365 (view UCSC Genome Browser custom track)
Alignm length:	743
Alignm identity:	535
Alignm E-value:	0
Alignm gaps (pig, cow):	98, 148
Conread position:	3-733
Cow position:	chr1:99019074-99018358 (view UCSC Genome Browser custom track)
Alignm length:	740
Alignm identity:	543
Alignm E-value:	0
Alignm gaps (pig, cow):	185, 134
Conread position:	5-517
Cow position:	chr1:101861125-101860633 (view UCSC Genome Browser custom track)
Alignm length:	513
Alignm identity:	355
Alignm E-value:	0
Alignm gaps (pig, cow):	29, 0
Conread position:	8-653
Cow position:	chr1:70419439-70418804 (view UCSC Genome Browser custom track)
Alignm length:	660
Alignm identity:	470
Alignm E-value:	0
Alignm gaps (pig, cow):	202, 57
Conread position:	64-740
Cow position:	chr1:67326928-67326284 (view UCSC Genome Browser custom track)
Alignm length:	687
Alignm identity:	442
Alignm E-value:	0
Alignm gaps (pig, cow):	72, 49
Conread position:	76-540
Cow position:	chr1:16581494-16581055 (view UCSC Genome Browser custom track)
Alignm length:	472
Alignm identity:	335
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 7
Conread position:	94-693
Cow position:	chr1:72992547-72993117 (view UCSC Genome Browser custom track)
Alignm length:	604
Alignm identity:	419
Alignm E-value:	0
Alignm gaps (pig, cow):	63, 48
Conread position:	135-735
Cow position:	chr1:13581915-13581323 (view UCSC Genome Browser custom track)
Alignm length:	612
Alignm identity:	445
Alignm E-value:	0
Alignm gaps (pig, cow):	22, 56
Conread position:	137-709
Cow position:	chr1:81841400-81840845 (view UCSC Genome Browser custom track)
Alignm length:	580
Alignm identity:	381
Alignm E-value:	0
Alignm gaps (pig, cow):	24, 12
Conread position:	173-735
Cow position:	chr1:46836721-46837295 (view UCSC Genome Browser custom track)
Alignm length:	581
Alignm identity:	373
Alignm E-value:	0
Alignm gaps (pig, cow):	47, 148
Conread position:	175-704
Cow position:	chr1:40749127-40748608 (view UCSC Genome Browser custom track)
Alignm length:	538
Alignm identity:	354
Alignm E-value:	0
Alignm gaps (pig, cow):	59, 77
Conread position:	183-735
Cow position:	chr1:78923343-78923890 (view UCSC Genome Browser custom track)
Alignm length:	559
Alignm identity:	376
Alignm E-value:	0
Alignm gaps (pig, cow):	86, 50
Conread position:	210-618
Cow position:	chr1:41782167-41781764 (view UCSC Genome Browser custom track)
Alignm length:	425
Alignm identity:	293
Alignm E-value:	5.99994e-41
Alignm gaps (pig, cow):	18, 68