Cow genome map
| Conread name: | Pig2-126O06 |
| Conread position: | 71-236 |
| Cow position: | chr10:39874390-39874228 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 71-275 |
| Cow position: | chr10:53335859-53336052 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 156, 42 |
| Conread position: | 72-213 |
| Cow position: | chr10:39874365-39874226 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 71-265 |
| Cow position: | chr11:25931907-25932114 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 20, 170 |
| Conread position: | 71-244 |
| Cow position: | chr13:61833139-61833319 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 139 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 71-250 |
| Cow position: | chr13:8726141-8725970 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 63, 95 |
| Conread position: | 71-265 |
| Cow position: | chr13:8726581-8726380 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 71-265 |
| Cow position: | chr13:8726818-8726629 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 155, 82 |
| Conread position: | 71-265 |
| Cow position: | chr13:35731669-35731485 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 178, 8 |
| Conread position: | 71-266 |
| Cow position: | chr13:8726754-8726551 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 13, 182 |
| Conread position: | 71-266 |
| Cow position: | chr13:17557741-17557543 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 154, 0 |
| Conread position: | 71-269 |
| Cow position: | chr13:8726770-8726566 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 164 |
| Conread position: | 72-259 |
| Cow position: | chr13:8726877-8726687 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 159 |
| Conread position: | 71-190 |
| Cow position: | chr14:27161603-27161486 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 94 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 72-214 |
| Cow position: | chr14:27161626-27161486 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 71-235 |
| Cow position: | chr15:2510078-2509917 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 80, 8 |
| Conread position: | 71-242 |
| Cow position: | chr15:19847390-19847221 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 169, 38 |
| Conread position: | 71-264 |
| Cow position: | chr15:42892471-42892659 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 71-278 |
| Cow position: | chr15:42892419-42892625 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 42, 100 |
| Conread position: | 72-268 |
| Cow position: | chr15:42892404-42892597 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 174, 93 |
| Conread position: | 71-250 |
| Cow position: | chr16:18217936-18218113 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 71-259 |
| Cow position: | chr16:37317747-37317930 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 110 |
| Conread position: | 72-220 |
| Cow position: | chr16:56694278-56694136 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 72-257 |
| Cow position: | chr16:56694354-56694168 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 63, 176 |
| Conread position: | 70-256 |
| Cow position: | chr17:12319021-12318846 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 71-251 |
| Cow position: | chr17:25501140-25501337 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 172 |
| Conread position: | 72-269 |
| Cow position: | chr17:25500976-25501173 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 137, 39 |
| Conread position: | 71-249 |
| Cow position: | chr19:7151867-7151688 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 156, 0 |
| Conread position: | 71-220 |
| Cow position: | chr2:56956716-56956871 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 71-269 |
| Cow position: | chr2:9721933-9721728 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 17, 164 |
| Conread position: | 60-265 |
| Cow position: | chr20:34478895-34479103 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 60-266 |
| Cow position: | chr20:34479083-34479290 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 115 |
| Conread position: | 60-266 |
| Cow position: | chr20:34479271-34479484 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 9, 171 |
| Conread position: | 71-266 |
| Cow position: | chr20:25039360-25039550 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 182, 40 |
| Conread position: | 71-266 |
| Cow position: | chr20:34479156-34479356 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 108 |
| Conread position: | 72-211 |
| Cow position: | chr20:41889600-41889740 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 72-265 |
| Cow position: | chr20:22195892-22196088 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 160 |
| Conread position: | 72-269 |
| Cow position: | chr20:25039664-25039858 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 154, 95 |
| Conread position: | 72-270 |
| Cow position: | chr20:25039280-25039480 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 60, 158 |
| Conread position: | 64-266 |
| Cow position: | chr21:6723215-6723411 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 104 |
| Conread position: | 71-155 |
| Cow position: | chr21:1758243-1758327 (view UCSC Genome Browser custom track) |
| Alignm length: | 85 |
| Alignm identity: | 76 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 71-266 |
| Cow position: | chr21:6723151-6723339 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 72-234 |
| Cow position: | chr21:7438157-7437990 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 72-243 |
| Cow position: | chr23:1393873-1393705 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 154, 83 |
| Conread position: | 71-263 |
| Cow position: | chr24:37075132-37075322 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 71-269 |
| Cow position: | chr24:37075315-37075516 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 71-261 |
| Cow position: | chr27:25955188-25955384 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 18, 161 |
| Conread position: | 71-267 |
| Cow position: | chr27:25955499-25955690 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 174, 84 |
| Conread position: | 72-265 |
| Cow position: | chr27:25955432-25955626 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 121, 176 |
| Conread position: | 64-197 |
| Cow position: | chr28:9408838-9408968 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 105 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 72-257 |
| Cow position: | chr28:9830686-9830496 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 9, 160 |
| Conread position: | 72-269 |
| Cow position: | chr29:33485012-33485213 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 58-152 |
| Cow position: | chr4:9815241-9815148 (view UCSC Genome Browser custom track) |
| Alignm length: | 95 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 68-173 |
| Cow position: | chr4:9815238-9815135 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 87 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 71-223 |
| Cow position: | chr4:69263539-69263689 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 72-235 |
| Cow position: | chr4:69263436-69263602 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 58, 158 |
| Conread position: | 72-250 |
| Cow position: | chr4:69263392-69263568 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 66, 115 |
| Conread position: | 72-263 |
| Cow position: | chr4:68201542-68201352 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 173, 154 |
| Conread position: | 72-266 |
| Cow position: | chr4:68201562-68201367 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 39, 176 |
| Conread position: | 72-267 |
| Cow position: | chr4:69262996-69263184 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 174, 58 |
| Conread position: | 72-250 |
| Cow position: | chr5:74719896-74720073 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 72-265 |
| Cow position: | chr5:68162374-68162184 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 173, 45 |
| Conread position: | 70-269 |
| Cow position: | chr6:15038259-15038453 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 137 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 70-269 |
| Cow position: | chr6:65904710-65904510 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 102, 161 |
| Conread position: | 71-258 |
| Cow position: | chr6:65904655-65904475 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 71-264 |
| Cow position: | chr6:16626624-16626816 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 65, 57 |
| Conread position: | 71-274 |
| Cow position: | chr6:65903990-65903788 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 95 |
| Conread position: | 71-264 |
| Cow position: | chr7:39615872-39616060 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 26-205 |
| Cow position: | chrX:4165498-4165317 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 71-266 |
| Cow position: | chrX:10526566-10526377 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 121, 56 |
| Conread position: | 71-269 |
| Cow position: | chrX:30833355-30833554 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 83, 57 |
| Conread position: | 71-269 |
| Cow position: | chrX:33850392-33850593 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 18, 102 |
| Conread position: | 71-270 |
| Cow position: | chrX:33850412-33850613 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 64, 160 |