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Cow genome map

           
Conread name:
           
Pig2-44F14
        

               
Conread position:
               
1-163
               

               
Cow position:
               
chr1:58274459-58274619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr1:73763127-73762967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr1:66487696-66487935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
134, 47
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr1:40533570-40533326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr1:77747211-77747460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr1:15437453-15437198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr1:82655116-82655371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr1:85794438-85794693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr1:87723214-87722967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr1:71560277-71560021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:13437998-13437741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:29364877-29365130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:33853751-33854004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:44087048-44086791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:53366393-53366641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:67832669-67832419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
142, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:73434860-73434603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:76740386-76740129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:81289753-81290010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:86593834-86593581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr1:90973419-90973676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
2-244
               

               
Cow position:
               
chr1:14529988-14529737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr1:55328929-55328690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr1:79634085-79633830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 46
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr1:102551473-102551731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
72, 46
               

               
Conread position:
               
3-248
               

               
Cow position:
               
chr1:31415737-31415498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
147, 40
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr10:13851637-13851798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr10:17958575-17958735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr10:54929482-54929304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr10:278859-278605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr10:6287240-6287491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr10:21738235-21737982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr10:24756667-24756920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr10:25340647-25340898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr10:31526210-31526465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:8324638-8324388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:21450708-21450454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:25564062-25563809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:26292995-26292739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:29107288-29107040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:30688490-30688746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:30719183-30719440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:38543422-38543182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:39849733-39849476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:47909113-47909365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:55010307-55010560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:55099432-55099175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:57554845-57554588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr10:68097122-68096867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
162, 55
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:20538799-20539062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
118, 44
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:34665269-34665021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
151, 46
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr10:36445164-36444918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 39
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr10:50198527-50198763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
204, 41
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr11:7118542-7118666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
8e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr11:1487981-1487821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-194
               

               
Cow position:
               
chr11:5982263-5982452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-232
               

               
Cow position:
               
chr11:4061738-4061513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
140, 42
               

               
Conread position:
               
1-233
               

               
Cow position:
               
chr11:30121517-30121276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr11:9080416-9080167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr11:10699618-10699363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr11:28124643-28124898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr11:32478684-32478429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr11:47737413-47737162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr11:58947772-58948022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr11:22934461-22934204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr11:26068930-26068675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-39
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:10957949-10958206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:15720599-15720340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:19061946-19061689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:21897557-21897307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:28227649-28227394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:30254358-30254616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-39
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:35862499-35862243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:38575354-38575097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:38600806-38600552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:45106984-45107234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:63391347-63391091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:76371926-76371676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5.04467e-44
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr11:84966246-84966499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
2-241
               

               
Cow position:
               
chr11:37280552-37280310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
151, 44
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr11:7318048-7318294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr12:24980097-24980268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr12:3363357-3363604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
150, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr12:8064440-8064200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr12:17717713-17717968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr12:25266921-25266666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr12:34964886-34964631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr12:21430375-21430632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr12:21483819-21484069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr12:36212669-36212925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr12:38892774-38893031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr12:1775503-1775245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr12:32655968-32656224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
156, 46
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr12:21944533-21944788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
141, 43
               

               
Conread position:
               
1-123
               

               
Cow position:
               
chr13:60425207-60425328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr13:4735481-4735641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr13:679979-680140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr13:28527703-28527542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr13:31509112-31509285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr13:4733737-4733983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr13:11389411-11389658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr13:22275015-22275258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
179, 45
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr13:26846685-26846935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
152, 69
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:3555615-3555870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr13:43591479-43591732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
108, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:5499783-5499526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:15447285-15447037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
162, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:18122667-18122410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:34509606-34509355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:35539369-35539627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:36671859-36672117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr13:60647377-60647124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr13:30240755-30241011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 44
               

               
Conread position:
               
1-120
               

               
Cow position:
               
chr14:30737429-30737547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr14:37769051-37769179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-140
               

               
Cow position:
               
chr14:38434961-38435095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr14:45164464-45164623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 46
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr14:48827355-48827515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr14:43563019-43563249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
143, 42
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr14:36710965-36710720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr14:46123207-46123453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr14:32733302-32733050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
145, 48
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr14:38460377-38460122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr14:17489250-17488993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr14:44260542-44260799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr14:44235724-44235989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
10-249
               

               
Cow position:
               
chr14:48490683-48490931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 36
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr15:50149400-50149561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr15:2645568-2645358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr15:6615099-6615305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-214
               

               
Cow position:
               
chr15:6563256-6563479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-219
               

               
Cow position:
               
chr15:7840381-7840608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
161, 47
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr15:4673323-4673572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr15:5497134-5497383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-243
               

               
Cow position:
               
chr15:35737866-35738112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr15:1600665-1600917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr15:36623587-36623334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-246
               

               
Cow position:
               
chr15:5982724-5982976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr15:7848428-7848683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr15:25331508-25331759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr15:31586315-31586066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr15:13546970-13546712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:443710-443454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:4081083-4081340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:6384475-6384218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:25070415-25070160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:25204928-25204671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:28488045-28487793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:31270794-31270537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:32702661-32702403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:35644373-35644117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr15:36941308-36941052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-251
               

               
Cow position:
               
chr15:14756080-14756333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr15:4917278-4917525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
3-244
               

               
Cow position:
               
chr15:2806797-2806573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr15:22540739-22540483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 45
               

               
Conread position:
               
4-247
               

               
Cow position:
               
chr15:2410615-2410370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
127, 11
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr15:2014581-2014833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
156, 44
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr16:36240886-36241100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
1-221
               

               
Cow position:
               
chr16:194176-193953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
140, 45
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr16:42162478-42162722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr16:16268164-16267915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 42
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr16:21188964-21189219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr16:23876794-23876545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr16:46521319-46521063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 9
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:1433921-1434183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:2303858-2304114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:3010569-3010822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:3031772-3031509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:3144665-3144412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:3149297-3149044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:4388466-4388724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:5526372-5526119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:15411318-15411066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:15811798-15812055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:20642239-20642489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:23097461-23097208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:26991219-26990961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:27711441-27711191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
123, 34
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:28168588-28168331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:46554170-46554410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:47403113-47403370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr16:51402120-51401864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr16:5762513-5762779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr16:32325586-32325840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr17:11380892-11380731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-173
               

               
Cow position:
               
chr17:21768817-21768645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
1-178
               

               
Cow position:
               
chr17:38617367-38617555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr17:1570092-1569858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
143, 45
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr17:2005389-2005620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr17:9752087-9752335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr17:24784464-24784716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:2245749-2245510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
154, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:2264483-2264740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:4062627-4062884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:5307441-5307184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:8210949-8211207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:15373712-15373958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:15808269-15808526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:27792485-27792228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:29825667-29825415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
157, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr17:39950769-39950512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr17:22562444-22562700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr18:19354877-19355036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr18:16464347-16464111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr18:55417238-55417490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr18:24618944-24619195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr18:51662663-51662919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:603943-603694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:16081039-16081296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:22183015-22182768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
192, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:32165415-32165162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
162, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:32437588-32437332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:36647688-36647943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:51344618-51344875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr18:28929075-28928820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
108, 45
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr18:51460325-51460070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
1-126
               

               
Cow position:
               
chr19:24727160-24727036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr19:22511256-22511099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr19:43147194-43147355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr19:38810939-38811164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr19:16318089-16317836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr19:20610852-20611107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr19:22390938-22390683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr19:40853-41110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr19:5901091-5901345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr19:7344553-7344810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr19:15445345-15445088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr19:20107261-20107518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr19:25378458-25378708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 44
               

               
Conread position:
               
34-179
               

               
Cow position:
               
chr19:74707-74563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 14
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr2:46908484-46908323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr2:3793917-3793755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr2:47183164-47183003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr2:47036446-47036247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr2:78748265-78748497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr2:34577511-34577271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 42
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr2:57337922-57338171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr2:39118565-39118819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr2:52498113-52497858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr2:62999887-63000142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:1692874-1693133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:6881424-6881681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
160, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:14824977-14825244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
136, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:14900377-14900628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:24687645-24687898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:33081789-33081543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:41047286-41047029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:44093330-44093586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:45937750-45937503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:53541904-53542157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:54739450-54739703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:57053531-57053783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr2:77858300-77858548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
35, 48
               

               
Conread position:
               
2-163
               

               
Cow position:
               
chr2:16754009-16753848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr2:12329919-12330166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-34
               

               
Alignm gaps (pig, cow):
               
170, 40
               

               
Conread position:
               
3-249
               

               
Cow position:
               
chr2:55482225-55481989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-38
               

               
Alignm gaps (pig, cow):
               
161, 43
               

               
Conread position:
               
36-249
               

               
Cow position:
               
chr2:62734168-62734391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
28, 12
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr20:9995781-9995940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr20:3809288-3809033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr20:39233712-39233968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:752629-752886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:8214513-8214264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
150, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:14757774-14757518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:19243956-19244204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:19440397-19440653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:21719047-21719305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
99, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:24541907-24542164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:28444866-28444609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr20:34459822-34459570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
150, 47
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr20:35144397-35144162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr21:11291282-11291443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr21:39427670-39427831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr21:15548280-15548119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-202
               

               
Cow position:
               
chr21:34902788-34902583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
135, 47
               

               
Conread position:
               
1-229
               

               
Cow position:
               
chr21:4078641-4078878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr21:469696-469935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
169, 45
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr21:37040023-37039778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 40
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr21:39225462-39225212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr21:41797129-41796874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:6966873-6966622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
156, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:15398382-15398125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:26700071-26699815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:27148962-27148703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:27620904-27620645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:32397457-32397200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:34255999-34255741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:34656555-34656806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:36375582-36375838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr21:42916387-42916642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr21:2538556-2538299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 47
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr21:20742073-20741829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-130
               

               
Cow position:
               
chr22:37136326-37136454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-159
               

               
Cow position:
               
chr22:50460-50617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr22:22956891-22956730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr22:28713097-28713258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr22:25941688-25941928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr22:44367057-44366802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr22:35904745-35904496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
157, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:696348-696605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:3304233-3303976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:5014526-5014760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:11802628-11802372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
155, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:18029695-18029950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:27307546-27307289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:30676306-30676053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
157, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:34170762-34171018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:35669244-35668987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:37269517-37269774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr22:48272592-48272330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
49, 80
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:532517-532771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
144, 45
               

               
Conread position:
               
1-250
               

               
Cow position:
               
chr22:40588826-40589082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:539553-539810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
160, 46
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:10907779-10907527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 46
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr22:43235265-43235512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 41
               

               
Conread position:
               
3-124
               

               
Cow position:
               
chr22:44479180-44479300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
3-189
               

               
Cow position:
               
chr22:10326538-10326729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
143, 40
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr23:41142756-41142916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-212
               

               
Cow position:
               
chr23:1339359-1339143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
149, 45
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr23:1800054-1800299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
82, 49
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr23:30212428-30212180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:15568509-15568253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
103, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr23:22989461-22989210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr23:609146-609397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr23:2321528-2321273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr23:5872149-5871892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr23:8705279-8705532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr23:14264762-14265021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
150, 47
               

               
Conread position:
               
1-257
               

               
Cow position:
               
chr23:28221121-28221383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
4-248
               

               
Cow position:
               
chr23:16496851-16496599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
153, 44
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr24:13177677-13177504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-196
               

               
Cow position:
               
chr24:3850073-3850277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr24:12203860-12203640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr24:14377151-14376903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr24:36712756-36712994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr24:7064068-7064325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 48
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr24:12698512-12698257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr24:21248442-21248187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr24:25371440-25371695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr24:36557075-36556818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:6021574-6021318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
35, 43
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:6440258-6440514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:13234745-13235001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:15295331-15295588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:17323198-17323455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:19689075-19688820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:20366871-20367124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:29154865-29155119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr24:32362615-32362357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-254
               

               
Cow position:
               
chr24:39680029-39680287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
2-149
               

               
Cow position:
               
chr24:33321379-33321233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
2-248
               

               
Cow position:
               
chr24:18267980-18267727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 44
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr24:13190678-13190929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
152, 46
               

               
Conread position:
               
1-161
               

               
Cow position:
               
chr25:27020128-27019969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr25:29803576-29803415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:18489227-18489464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr25:9494387-9494137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:11664874-11665132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
28, 46
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr25:41098980-41098724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr25:18191184-18190929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
150, 46
               

               
Conread position:
               
3-245
               

               
Cow position:
               
chr25:37647638-37647890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 40
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr26:13772461-13772310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr26:27988352-27988192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr26:31792966-31793127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-184
               

               
Cow position:
               
chr26:6497148-6496978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr26:21824191-21823952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr26:3028165-3027905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
161, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr26:4440879-4441134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr26:28707602-28707347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr26:2349713-2349458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr26:1884375-1884117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
128, 52
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr26:9841946-9841691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
153, 52
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr26:13807561-13807312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
110, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr26:23888870-23889126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-143
               

               
Cow position:
               
chr27:25884446-25884305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr27:11433543-11433766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr27:1676121-1675870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr27:26553009-26552759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr27:1520093-1520348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr27:22742970-22742739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:797195-796937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:1031254-1031511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:13352709-13352964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr27:27235765-27236016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
161, 47
               

               
Conread position:
               
5-249
               

               
Cow position:
               
chr27:15273659-15273404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
91, 41
               

               
Conread position:
               
1-146
               

               
Cow position:
               
chr28:7738653-7738797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr28:5636288-5636449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-175
               

               
Cow position:
               
chr28:11503763-11503591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
153, 42
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr28:5338238-5338032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr28:16596787-16597003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr28:10616584-10616334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr28:15539255-15539015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
138, 48
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr28:21568367-21568614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr28:25702446-25702199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr28:21378995-21379247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr28:6536336-6536083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr28:28928291-28928546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
160, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr28:34730372-34730628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr28:8718513-8718256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr28:15604074-15604330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr28:15918063-15917808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
87, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr28:28358319-28358068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr28:30534603-30534346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr28:34596705-34596962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
2-249
               

               
Cow position:
               
chr28:7335452-7335704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
4-163
               

               
Cow position:
               
chr28:10293897-10294055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
1-187
               

               
Cow position:
               
chr29:40619388-40619204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-234
               

               
Cow position:
               
chr29:14500296-14500537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-239
               

               
Cow position:
               
chr29:32288813-32289060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 47
               

               
Conread position:
               
1-240
               

               
Cow position:
               
chr29:31764472-31764719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr29:31095158-31094908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
111, 47
               

               
Conread position:
               
1-242
               

               
Cow position:
               
chr29:2415647-2415397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr29:666978-666723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr29:6219366-6219116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:608199-607946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:1477881-1478138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:5785242-5785499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:15624269-15624012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:19525860-19525603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:27260692-27260431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
164, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:28657940-28657684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:32514757-32515011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr29:35299349-35299606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
2-160
               

               
Cow position:
               
chr29:17137162-17137319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
317-529
               

               
Cow position:
               
chr29:19125241-19125456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
1-117
               

               
Cow position:
               
chr3:15191661-15191776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-122
               

               
Cow position:
               
chr3:2871140-2871260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
5e-23
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-129
               

               
Cow position:
               
chr3:39080871-39080998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-162
               

               
Cow position:
               
chr3:2366798-2366637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-226
               

               
Cow position:
               
chr3:69963458-69963223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr3:50124653-50124420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 45
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr3:33692675-33692427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
163, 48
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr3:35885992-35885752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-35
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr3:29581008-29581259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
128, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr3:15415813-15416064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr3:31021026-31021281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr3:27865519-27865773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
153, 49
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:6713351-6713609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
77, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:13724372-13724112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
140, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:18461773-18461523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
151, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:19798809-19798552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:24264544-24264802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:25688994-25689253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
143, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:27920793-27921048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:30616593-30616337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:32327084-32326823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:37971395-37971644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:48239602-48239857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
163, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:48525090-48525342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:49908669-49908412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:49998481-49998738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:53048436-53048179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
162, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:54655114-54655371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
159, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:56328468-56328726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:57741870-57742127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
145, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:64653010-64653267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
151, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr3:72389302-72389566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-36
               

               
Alignm gaps (pig, cow):
               
130, 45
               

               
Conread position:
               
1-290
               

               
Cow position:
               
chr3:64025787-64025489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr3:62881710-62881986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 46
               

               
Conread position:
               
1-116
               

               
Cow position:
               
chr4:19263463-19263577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr4:43869601-43869760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-207
               

               
Cow position:
               
chr4:67393416-67393621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:13463960-13464210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 47
               

               
Conread position:
               
1-241
               

               
Cow position:
               
chr4:34176834-34176592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
147, 45
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr4:54811712-54811458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr4:63000293-63000544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:16061430-16061685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr4:18336798-18336542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:161316-161572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:1369847-1369593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
153, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:6267064-6266808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:6864079-6863826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
153, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:15815345-15815089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
145, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:25877557-25877803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
193, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:33021478-33021227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:41956915-41957168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
90, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:47263197-47262940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr4:47751494-47751756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
23, 48
               

               
Conread position:
               
1-255
               

               
Cow position:
               
chr4:27372854-27372591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
104, 42
               

               
Conread position:
               
3-235
               

               
Cow position:
               
chr4:44594214-44593974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
161, 43
               

               
Conread position:
               
1-152
               

               
Cow position:
               
chr5:46670559-46670709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr5:14342993-14342844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr5:26366832-26366993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-163
               

               
Cow position:
               
chr5:45702570-45702731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
1-179
               

               
Cow position:
               
chr5:21523556-21523381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
1-198
               

               
Cow position:
               
chr5:12730461-12730255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
1-223
               

               
Cow position:
               
chr5:26625954-26625724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
83, 45
               

               
Conread position:
               
1-244
               

               
Cow position:
               
chr5:70532155-70531908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
91, 58
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr5:26076951-26076696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr5:40759590-40759334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
1-247
               

               
Cow position:
               
chr5:59145622-59145878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
1-248
               

               
Cow position:
               
chr5:35988754-35988501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:4964124-4963870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
164, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:6586212-6585955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:7141852-7141595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
163, 42
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:14544052-14543796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:23958075-23957821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
159, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:27177895-27178153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
91, 45
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:34191183-34191429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
180, 110
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:46627018-46626761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
163, 255
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:46792100-46792357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
163, 47
               

               
Conread position:
               
1-249
               

               
Cow position:
               
chr5:57889163-57888911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
138, 47
               

               
Conread position:
               
3-193
               

               
Cow position:
               
chr5:40922441-40922250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-31
               

               
Alignm gaps (pig, cow):
               
127, 44
               
3-241UCSC Genome Browser

               
Conread position:
               

               

               
Cow position:
               
chr5:18703912-18704159 (view  custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 43
               
1-163UCSC Genome Browser

               
               
               
Conread position:

               
               
               
Cow position:
chr6:61052707-61052546 (view  custom track)

               
               
               
Alignm length:
163

               
               
               
Alignm identity:
132

               
               
               
Alignm E-value:
7e-38

               
               
               
Alignm gaps (pig, cow):
47, 0
1-194UCSC Genome Browser

               
               
               
Conread position:

               
               
               
Cow position:
chr6:32001891-32001712 (view  custom track)

               
               
               
Alignm length:
194

               
               
               
Alignm identity:
143

               
               
               
Alignm E-value:
1e-23

               
               
               
Alignm gaps (pig, cow):
47, 0

               
               
               Conread position:1-197
               
               
               Cow position:chr6:24625199-24625009 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:146
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-232
               
               
               Cow position:chr6:6094625-6094861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-235
               
               
               Cow position:chr6:53544488-53544730 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:181
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-241
               
               
               Cow position:chr6:62664163-62664411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:187
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr6:14133355-14133101 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:191
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr6:18986407-18986657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:188
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):173, 45

               
               
               Conread position:1-247
               
               
               Cow position:chr6:25375704-25375449 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:192
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr6:25803606-25803351 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:193
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-248
               
               
               Cow position:chr6:51895675-51895437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:1-248
               
               
               Cow position:chr6:59595643-59595896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):163, 42

               
               
               Conread position:1-249
               
               
               Cow position:chr6:2377091-2377348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:193
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr6:3573172-3573428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):145, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr6:14927848-14928107 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr6:16050901-16050646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:194
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr6:18913087-18912830 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:201
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr6:19104522-19104265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr6:28064385-28064634 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):156, 42

               
               
               Conread position:1-249
               
               
               Cow position:chr6:37386969-37387224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:192
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr6:38273959-38274215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):163, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr6:43620119-43620375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:198
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr6:68029564-68029821 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):152, 47

               
               
               Conread position:1-255
               
               
               Cow position:chr6:10646072-10646322 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:193
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):176, 42

               
               
               Conread position:1-269
               
               
               Cow position:chr6:40159115-40158840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):137, 52

               
               
               Conread position:5-249
               
               
               Cow position:chr6:35417525-35417275 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:187
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):159, 43

               
               
               Conread position:10-249
               
               
               Cow position:chr6:50636690-50636934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):144, 36

               
               
               Conread position:19-162
               
               
               Cow position:chr6:662531-662388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:105
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:1-151
               
               
               Cow position:chr7:52408018-52408167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:151
               
               
               Alignm identity:120
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-152
               
               
               Cow position:chr7:24933078-24932928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:152
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:1-162
               
               
               Cow position:chr7:19181668-19181507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:128
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):106, 47

               
               
               Conread position:1-163
               
               
               Cow position:chr7:61833483-61833326 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:126
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-213
               
               
               Cow position:chr7:67431039-67431253 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:160
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):179, 45

               
               
               Conread position:1-232
               
               
               Cow position:chr7:26836896-26837134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:240
               
               
               Alignm identity:182
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):145, 42

               
               
               Conread position:1-232
               
               
               Cow position:chr7:68234811-68235052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:173
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):24, 46

               
               
               Conread position:1-234
               
               
               Cow position:chr7:1555876-1556124 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):23, 51

               
               
               Conread position:1-241
               
               
               Cow position:chr7:6626894-6626646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:190
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr7:6665980-6666234 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:191
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr7:60465199-60465454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:191
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-248
               
               
               Cow position:chr7:48637201-48637454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:202
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):161, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr7:537361-537105 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):145, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr7:547331-547574 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:184
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):180, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr7:997687-997928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:192
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:1-249
               
               
               Cow position:chr7:1722665-1722403 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):159, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr7:3157779-3158034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 42

               
               
               Conread position:1-249
               
               
               Cow position:chr7:8337858-8338115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:198
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr7:20796972-20796722 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):153, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr7:21424886-21424629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr7:23535146-23535404 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr7:37165342-37165598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):140, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr7:42872603-42872854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):164, 42

               
               
               Conread position:1-249
               
               
               Cow position:chr7:49071529-49071264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:200
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):144, 42

               
               
               Conread position:1-249
               
               
               Cow position:chr7:57025573-57025320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):77, 42

               
               
               Conread position:1-250
               
               
               Cow position:chr7:36344298-36344044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:195
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-255
               
               
               Cow position:chr7:113094-113356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-38
               
               
               Alignm gaps (pig, cow):111, 47

               
               
               Conread position:1-257
               
               
               Cow position:chr7:39531502-39531246 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:201
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):164, 42

               
               
               Conread position:2-248
               
               
               Cow position:chr7:21316637-21316890 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):143, 44

               
               
               Conread position:2-249
               
               
               Cow position:chr7:68853484-68853233 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:189
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):134, 46

               
               
               Conread position:2-250
               
               
               Cow position:chr7:49827864-49827607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):60, 44

               
               
               Conread position:2-264
               
               
               Cow position:chr7:28087560-28087817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:194
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):161, 44

               
               
               Conread position:3-239
               
               
               Cow position:chr7:13428-13186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:243
               
               
               Alignm identity:180
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):158, 0

               
               
               Conread position:3-249
               
               
               Cow position:chr7:42225315-42225059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):108, 43

               
               
               Conread position:3-249
               
               
               Cow position:chr7:59559897-59559645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):157, 45

               
               
               Conread position:36-241
               
               
               Cow position:chr7:49847410-49847201 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:157
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):24, 12

               
               
               Conread position:1-127
               
               
               Cow position:chr8:36786129-36786004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:127
               
               
               Alignm identity:103
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-140
               
               
               Cow position:chr8:9640561-9640698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:140
               
               
               Alignm identity:111
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-163
               
               
               Cow position:chr8:50683735-50683575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:124
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-163
               
               
               Cow position:chr8:51317353-51317514 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:123
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):104, 42

               
               
               Conread position:1-164
               
               
               Cow position:chr8:32081989-32081827 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:124
               
               
               Alignm E-value:8e-30
               
               
               Alignm gaps (pig, cow):42, 0

               
               
               Conread position:1-212
               
               
               Cow position:chr8:47659656-47659439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):58, 47

               
               
               Conread position:1-234
               
               
               Cow position:chr8:51207675-51207444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:234
               
               
               Alignm identity:166
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):45, 0

               
               
               Conread position:1-241
               
               
               Cow position:chr8:47675504-47675754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):113, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr8:6203619-6203368 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:192
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr8:22569633-22569378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:194
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr8:42318605-42318350 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:193
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr8:52860915-52861169 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:194
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):102, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr8:1109856-1110113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:198
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr8:9738198-9738442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:184
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-249
               
               
               Cow position:chr8:10751008-10751264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):149, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr8:11374019-11373768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):152, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr8:12805440-12805695 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-40
               
               
               Alignm gaps (pig, cow):158, 140

               
               
               Conread position:1-249
               
               
               Cow position:chr8:14257752-14258006 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):139, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr8:32435182-32434925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:196
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):111, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr8:38044468-38044209 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):98, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr8:38603361-38603117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:185
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):150, 49

               
               
               Conread position:2-163
               
               
               Cow position:chr8:17957498-17957346 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:121
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:1-162
               
               
               Cow position:chr9:54460231-54460075 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:129
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):156, 42

               
               
               Conread position:1-163
               
               
               Cow position:chr9:5534901-5534740 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:127
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-163
               
               
               Cow position:chr9:17062071-17061917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:126
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):152, 47

               
               
               Conread position:1-234
               
               
               Cow position:chr9:4941173-4940936 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-241
               
               
               Cow position:chr9:26276974-26277223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:188
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr9:202974-202719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:193
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr9:14002359-14002611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):68, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr9:30829072-30829323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:190
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):163, 42

               
               
               Conread position:1-247
               
               
               Cow position:chr9:31418187-31417933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:191
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chr9:50326161-50326416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:194
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-248
               
               
               Cow position:chr9:2485301-2485045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):151, 125

               
               
               Conread position:1-249
               
               
               Cow position:chr9:791996-791739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 205

               
               
               Conread position:1-249
               
               
               Cow position:chr9:2807040-2806783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.2039e-45
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr9:9198435-9198677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):121, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr9:17632789-17633051 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:193
               
               
               Alignm E-value:6e-37
               
               
               Alignm gaps (pig, cow):175, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr9:20940773-20941030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):142, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr9:22441812-22442066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:198
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):161, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr9:27897336-27897591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:187
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):164, 192

               
               
               Conread position:1-249
               
               
               Cow position:chr9:34770473-34770731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:205
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 45

               
               
               Conread position:1-249
               
               
               Cow position:chr9:44167911-44168163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:195
               
               
               Alignm E-value:9.00054e-42
               
               
               Alignm gaps (pig, cow):159, 48

               
               
               Conread position:1-249
               
               
               Cow position:chr9:47044287-47044521 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:187
               
               
               Alignm E-value:8.99998e-41
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-249
               
               
               Cow position:chr9:56302123-56301867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-249
               
               
               Cow position:chr9:64012904-64012656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:185
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):192, 47

               
               
               Conread position:2-249
               
               
               Cow position:chr9:38678453-38678702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:191
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):89, 46

               
               
               Conread position:3-249
               
               
               Cow position:chr9:1998986-1998742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):108, 45

               
               
               Conread position:4-249
               
               
               Cow position:chr9:64006122-64005869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):142, 39

               
               
               Conread position:8-240
               
               
               Cow position:chr9:26054372-26054612 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:184
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):80, 38

               
               
               Conread position:1-144
               
               
               Cow position:chrX:16809659-16809517 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:144
               
               
               Alignm identity:116
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-163
               
               
               Cow position:chrX:16804914-16804753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:132
               
               
               Alignm E-value:5e-38
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-163
               
               
               Cow position:chrX:20034181-20034020 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:163
               
               
               Alignm identity:130
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):47, 0

               
               
               Conread position:1-213
               
               
               Cow position:chrX:2273528-2273748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:166
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):157, 47

               
               
               Conread position:1-239
               
               
               Cow position:chrX:36838945-36839194 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-39
               
               
               Alignm gaps (pig, cow):63, 47

               
               
               Conread position:1-239
               
               
               Cow position:chrX:45417374-45417130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:184
               
               
               Alignm E-value:8.96831e-44
               
               
               Alignm gaps (pig, cow):160, 45

               
               
               Conread position:1-240
               
               
               Cow position:chrX:30013220-30013468 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:187
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-241
               
               
               Cow position:chrX:24412253-24412501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):58, 42

               
               
               Conread position:1-241
               
               
               Cow position:chrX:28648617-28648389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:244
               
               
               Alignm identity:175
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):180, 42

               
               
               Conread position:1-241
               
               
               Cow position:chrX:28754112-28753863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:189
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-243
               
               
               Cow position:chrX:2500875-2501126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:187
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):147, 47

               
               
               Conread position:1-244
               
               
               Cow position:chrX:5281554-5281306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:190
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-244
               
               
               Cow position:chrX:10867626-10867375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:5333203-5332952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:13072221-13071966 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:192
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:13092781-13092526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:192
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:13243883-13244138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:191
               
               
               Alignm E-value:8.96831e-44
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:18657576-18657325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:193
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:19474923-19474669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:190
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:20357775-20357520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:192
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-247
               
               
               Cow position:chrX:36536505-36536250 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:191
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:2047316-2047567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):61, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:2486881-2487134 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:3360055-3360304 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:197
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:3418993-3418735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:192
               
               
               Alignm E-value:8.00141e-43
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:4766935-4767179 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:189
               
               
               Alignm E-value:2.8026e-45
               
               
               Alignm gaps (pig, cow):161, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:5366770-5366516 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-36
               
               
               Alignm gaps (pig, cow):155, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:5865366-5865626 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:197
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):159, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:9127310-9127567 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):162, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:12359115-12359372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:195
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:16045196-16045453 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:193
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:17053785-17054052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):82, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:17890771-17891024 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):163, 45

               
               
               Conread position:1-249
               
               
               Cow position:chrX:20741402-20741146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:22565460-22565203 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:192
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:29171556-29171299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:194
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:30167850-30167592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:193
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):163, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:31340440-31340182 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):15, 46

               
               
               Conread position:1-249
               
               
               Cow position:chrX:35532084-35532338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):153, 47

               
               
               Conread position:1-249
               
               
               Cow position:chrX:35887318-35887573 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:207
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):162, 45

               
               
               Conread position:1-250
               
               
               Cow position:chrX:21766857-21767115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:191
               
               
               Alignm E-value:1.99965e-42
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:1-250
               
               
               Cow position:chrX:29095090-29094832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):156, 47

               
               
               Conread position:2-163
               
               
               Cow position:chrX:13431943-13431786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:162
               
               
               Alignm identity:117
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):46, 0

               
               
               Conread position:2-249
               
               
               Cow position:chrX:12667103-12666847 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:197
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):155, 46