Cow genome map
| Conread name: | Spl1-SPL010024G06 |
| Conread position: | 192-583 |
| Cow position: | chr11:58103421-58103825 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 259 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 110, 35 |
| Conread position: | 215-554 |
| Cow position: | chr11:21835059-21835406 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 12, 16 |
| Conread position: | 186-549 |
| Cow position: | chr14:4993725-4993345 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 140, 30 |
| Conread position: | 193-549 |
| Cow position: | chr14:18255431-18255072 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 249 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 134, 16 |
| Conread position: | 195-487 |
| Cow position: | chr16:40900890-40900599 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 32, 19 |
| Conread position: | 196-546 |
| Cow position: | chr17:5346761-5346406 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-20 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 207-562 |
| Cow position: | chr17:12021747-12021386 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 238 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 226-543 |
| Cow position: | chr18:41289154-41289477 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 102, 35 |
| Conread position: | 195-544 |
| Cow position: | chr20:4252668-4252318 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 132, 31 |
| Conread position: | 196-560 |
| Cow position: | chr22:32516745-32517109 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 200-527 |
| Cow position: | chr22:35610922-35610596 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 27, 18 |
| Conread position: | 403-543 |
| Cow position: | chr26:6046865-6046720 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 64 |
| Conread position: | 198-447 |
| Cow position: | chr29:24639698-24639437 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 129, 51 |
| Conread position: | 228-548 |
| Cow position: | chr29:30109871-30110206 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 5 |
| Conread position: | 1-536 |
| Cow position: | chr5:14582467-14583015 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 424 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 82 |
| Conread position: | 196-566 |
| Cow position: | chr5:2301234-2301608 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 256 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 32, 22 |
| Conread position: | 532-780 |
| Cow position: | chr5:14583036-14583288 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 195-489 |
| Cow position: | chr6:51533830-51533534 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 204 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 32, 25 |
| Conread position: | 229-548 |
| Cow position: | chr6:49222856-49222543 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 100, 27 |
| Conread position: | 195-564 |
| Cow position: | chr7:42291943-42292341 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 279 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 32, 23 |
| Conread position: | 196-546 |
| Cow position: | chr8:5962566-5962201 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 208-487 |
| Cow position: | chr8:47041414-47041130 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 119, 164 |
| Conread position: | 160-565 |
| Cow position: | chr9:48110152-48109716 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 292 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 8, 70 |
| Conread position: | 182-546 |
| Cow position: | chr9:35207873-35207501 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 147, 37 |
| Conread position: | 190-550 |
| Cow position: | chr9:38031045-38030670 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 257 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 195-546 |
| Cow position: | chr9:60074812-60075164 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 259 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 88, 32 |
| Conread position: | 196-537 |
| Cow position: | chr9:11450917-11450564 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 196-544 |
| Cow position: | chr9:59356751-59356394 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 253 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 22 |
| Conread position: | 395-540 |
| Cow position: | chr9:28820533-28820387 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 199-562 |
| Cow position: | chrX:37379559-37379920 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 258 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 128, 19 |