Cow genome map
| Conread name: | Spl1-SPL01A090051 |
| Conread position: | 83-622 |
| Cow position: | chr10:6262076-6261537 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 394 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 95-739 |
| Cow position: | chr10:39882072-39881420 (view UCSC Genome Browser custom track) |
| Alignm length: | 667 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 188, 45 |
| Conread position: | 122-359 |
| Cow position: | chr10:24979072-24978832 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 11 |
| Conread position: | 124-643 |
| Cow position: | chr10:53363229-53363760 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 131-739 |
| Cow position: | chr10:24314574-24313975 (view UCSC Genome Browser custom track) |
| Alignm length: | 633 |
| Alignm identity: | 420 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 99 |
| Conread position: | 183-737 |
| Cow position: | chr10:21075659-21076212 (view UCSC Genome Browser custom track) |
| Alignm length: | 576 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 45 |
| Conread position: | 467-739 |
| Cow position: | chr10:24978549-24978280 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 119-675 |
| Cow position: | chr11:10218694-10218112 (view UCSC Genome Browser custom track) |
| Alignm length: | 590 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 19 |
| Conread position: | 128-565 |
| Cow position: | chr11:13068945-13068515 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 128-565 |
| Cow position: | chr11:13161052-13161482 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 12 |
| Conread position: | 132-563 |
| Cow position: | chr11:44229989-44230436 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 95 |
| Conread position: | 163-573 |
| Cow position: | chr11:9416732-9416315 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 59 |
| Conread position: | 243-739 |
| Cow position: | chr11:36761079-36761581 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 122 |
| Conread position: | 276-733 |
| Cow position: | chr11:38006301-38005837 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 7 |
| Conread position: | 311-666 |
| Cow position: | chr11:30186156-30186531 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 227 |
| Conread position: | 122-738 |
| Cow position: | chr12:17974721-17975327 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 264, 20 |
| Conread position: | 100-739 |
| Cow position: | chr13:30261161-30261809 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 482 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 42 |
| Conread position: | 131-723 |
| Cow position: | chr13:34047588-34048179 (view UCSC Genome Browser custom track) |
| Alignm length: | 614 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 96 |
| Conread position: | 213-595 |
| Cow position: | chr13:21130313-21130708 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 177 |
| Conread position: | 243-676 |
| Cow position: | chr13:22186657-22186210 (view UCSC Genome Browser custom track) |
| Alignm length: | 461 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 79 |
| Conread position: | 141-738 |
| Cow position: | chr14:30707838-30707239 (view UCSC Genome Browser custom track) |
| Alignm length: | 622 |
| Alignm identity: | 418 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 144-680 |
| Cow position: | chr14:39723314-39722780 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 117-448 |
| Cow position: | chr15:30809126-30809459 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 24 |
| Conread position: | 118-739 |
| Cow position: | chr15:32671458-32672106 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 473 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 21 |
| Conread position: | 130-461 |
| Cow position: | chr15:20358665-20358340 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 236 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 140-740 |
| Cow position: | chr15:32286117-32286700 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 426 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 234-690 |
| Cow position: | chr15:495986-496469 (view UCSC Genome Browser custom track) |
| Alignm length: | 489 |
| Alignm identity: | 318 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 31, 55 |
| Conread position: | 467-740 |
| Cow position: | chr15:20358098-20357828 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 50 |
| Conread position: | 124-465 |
| Cow position: | chr16:16819148-16818797 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 125-739 |
| Cow position: | chr16:14668762-14669380 (view UCSC Genome Browser custom track) |
| Alignm length: | 642 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 130-383 |
| Cow position: | chr16:55080786-55080532 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 50, 12 |
| Conread position: | 130-564 |
| Cow position: | chr16:25292835-25293275 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 8 |
| Conread position: | 130-740 |
| Cow position: | chr16:24155949-24155345 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 95 |
| Conread position: | 132-372 |
| Cow position: | chr16:20235152-20235397 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 49, 97 |
| Conread position: | 132-384 |
| Cow position: | chr16:25166305-25166558 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 49, 8 |
| Conread position: | 140-447 |
| Cow position: | chr16:41759580-41759257 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 86 |
| Conread position: | 163-560 |
| Cow position: | chr16:23873029-23872642 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 59 |
| Conread position: | 244-670 |
| Cow position: | chr16:28439185-28438744 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 294 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 519-740 |
| Cow position: | chr16:25166585-25166795 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 76 |
| Conread position: | 212-384 |
| Cow position: | chr17:13894442-13894266 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 124-308 |
| Cow position: | chr18:9187877-9187693 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 133-391 |
| Cow position: | chr18:16394480-16394233 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 11, 35 |
| Conread position: | 298-704 |
| Cow position: | chr18:9187341-9186917 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 228 |
| Conread position: | 122-739 |
| Cow position: | chr19:7450742-7450123 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 18 |
| Conread position: | 130-379 |
| Cow position: | chr19:17017375-17017619 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 131-658 |
| Cow position: | chr19:7406158-7405623 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 213-740 |
| Cow position: | chr19:20111883-20111346 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 70, 117 |
| Conread position: | 124-501 |
| Cow position: | chr2:20875391-20875010 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 19, 109 |
| Conread position: | 124-501 |
| Cow position: | chr2:20876995-20876614 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 251 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 18, 109 |
| Conread position: | 124-666 |
| Cow position: | chr2:50402017-50402563 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 105 |
| Conread position: | 128-470 |
| Cow position: | chr2:15581408-15581065 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 130-580 |
| Cow position: | chr2:11690958-11691409 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 282 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 51, 7 |
| Conread position: | 130-672 |
| Cow position: | chr2:77207383-77207935 (view UCSC Genome Browser custom track) |
| Alignm length: | 565 |
| Alignm identity: | 364 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 141-465 |
| Cow position: | chr2:45924211-45923878 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 84 |
| Conread position: | 175-643 |
| Cow position: | chr2:45969702-45969234 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 25 |
| Conread position: | 184-549 |
| Cow position: | chr2:4275218-4274837 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 41 |
| Conread position: | 449-740 |
| Cow position: | chr2:15580953-15580664 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 118, 23 |
| Conread position: | 130-643 |
| Cow position: | chr20:19368085-19367536 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 211-721 |
| Cow position: | chr20:18328979-18328463 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 389 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 110 |
| Conread position: | 116-448 |
| Cow position: | chr21:3193349-3193683 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 9 |
| Conread position: | 117-441 |
| Cow position: | chr21:9866481-9866160 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 111 |
| Conread position: | 124-732 |
| Cow position: | chr21:993694-993080 (view UCSC Genome Browser custom track) |
| Alignm length: | 634 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 15 |
| Conread position: | 130-564 |
| Cow position: | chr21:34002949-34002510 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 309 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 138, 10 |
| Conread position: | 92-275 |
| Cow position: | chr22:36582109-36581928 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 92-496 |
| Cow position: | chr22:36593201-36592783 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 119-706 |
| Cow position: | chr22:293997-293403 (view UCSC Genome Browser custom track) |
| Alignm length: | 611 |
| Alignm identity: | 447 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 102 |
| Conread position: | 132-504 |
| Cow position: | chr22:299373-298986 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 272 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 49, 70 |
| Conread position: | 145-723 |
| Cow position: | chr22:10964372-10964949 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 80 |
| Conread position: | 146-739 |
| Cow position: | chr22:35944217-35943616 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 457 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 150-674 |
| Cow position: | chr22:8873057-8873607 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 407 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 74 |
| Conread position: | 283-719 |
| Cow position: | chr22:36581764-36581337 (view UCSC Genome Browser custom track) |
| Alignm length: | 458 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 150, 84 |
| Conread position: | 302-440 |
| Cow position: | chr22:36553988-36553851 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 114 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 132, 84 |
| Conread position: | 140-623 |
| Cow position: | chr23:1322665-1322162 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 85 |
| Conread position: | 155-500 |
| Cow position: | chr23:6213928-6214278 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 245 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 124, 70 |
| Conread position: | 154-306 |
| Cow position: | chr24:14874212-14874056 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 25, 71 |
| Conread position: | 156-670 |
| Cow position: | chr24:6512281-6511754 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 342 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 29, 74 |
| Conread position: | 298-740 |
| Cow position: | chr24:14873923-14873478 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 41 |
| Conread position: | 301-739 |
| Cow position: | chr24:6047674-6048119 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 34 |
| Conread position: | 357-675 |
| Cow position: | chr25:3379274-3378950 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 92, 23 |
| Conread position: | 85-418 |
| Cow position: | chr26:12581781-12582109 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 23 |
| Conread position: | 207-658 |
| Cow position: | chr26:6489720-6489255 (view UCSC Genome Browser custom track) |
| Alignm length: | 482 |
| Alignm identity: | 324 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 130-465 |
| Cow position: | chr27:6012353-6012701 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 82 |
| Conread position: | 140-464 |
| Cow position: | chr27:5927391-5927728 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 230 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 45, 40 |
| Conread position: | 246-504 |
| Cow position: | chr27:21288947-21288678 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 39, 126 |
| Conread position: | 124-738 |
| Cow position: | chr28:10592164-10591549 (view UCSC Genome Browser custom track) |
| Alignm length: | 636 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 27 |
| Conread position: | 143-737 |
| Cow position: | chr28:29437909-29437322 (view UCSC Genome Browser custom track) |
| Alignm length: | 613 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 85 |
| Conread position: | 195-710 |
| Cow position: | chr28:8783366-8783892 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 29 |
| Conread position: | 96-663 |
| Cow position: | chr29:16017993-16017398 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 438 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 119-739 |
| Cow position: | chr3:64820717-64821342 (view UCSC Genome Browser custom track) |
| Alignm length: | 639 |
| Alignm identity: | 454 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 22 |
| Conread position: | 122-287 |
| Cow position: | chr3:21306571-21306408 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 56, 18 |
| Conread position: | 130-493 |
| Cow position: | chr3:17939207-17938852 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 54, 62 |
| Conread position: | 130-734 |
| Cow position: | chr3:37623838-37624443 (view UCSC Genome Browser custom track) |
| Alignm length: | 624 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 154-737 |
| Cow position: | chr3:18730017-18729429 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 389 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 31, 73 |
| Conread position: | 284-734 |
| Cow position: | chr3:60387625-60388080 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 36-663 |
| Cow position: | chr4:4175264-4175894 (view UCSC Genome Browser custom track) |
| Alignm length: | 656 |
| Alignm identity: | 472 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 39 |
| Conread position: | 130-727 |
| Cow position: | chr4:1497848-1497252 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 10 |
| Conread position: | 140-465 |
| Cow position: | chr4:970470-970140 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 41, 10 |
| Conread position: | 284-734 |
| Cow position: | chr4:40825204-40824739 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 310 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 97, 341 |
| Conread position: | 140-737 |
| Cow position: | chr5:58056734-58056133 (view UCSC Genome Browser custom track) |
| Alignm length: | 618 |
| Alignm identity: | 397 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 91 |
| Conread position: | 172-565 |
| Cow position: | chr5:6179373-6179784 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 264 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 166 |
| Conread position: | 244-447 |
| Cow position: | chr5:24109957-24109747 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 39, 164 |
| Conread position: | 467-721 |
| Cow position: | chr5:24109696-24109451 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 172, 57 |
| Conread position: | 115-573 |
| Cow position: | chr6:10628692-10629169 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 22 |
| Conread position: | 123-739 |
| Cow position: | chr6:59479098-59478468 (view UCSC Genome Browser custom track) |
| Alignm length: | 650 |
| Alignm identity: | 469 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 18 |
| Conread position: | 130-698 |
| Cow position: | chr6:35432699-35433262 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 375 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 72 |
| Conread position: | 132-667 |
| Cow position: | chr6:39161348-39161899 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 361 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 47, 56 |
| Conread position: | 207-720 |
| Cow position: | chr6:6541971-6542474 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 179 |
| Conread position: | 296-732 |
| Cow position: | chr6:34024149-34024580 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 230 |
| Conread position: | 107-739 |
| Cow position: | chr7:41877269-41876645 (view UCSC Genome Browser custom track) |
| Alignm length: | 652 |
| Alignm identity: | 435 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 118-708 |
| Cow position: | chr7:30120309-30119721 (view UCSC Genome Browser custom track) |
| Alignm length: | 620 |
| Alignm identity: | 452 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 23 |
| Conread position: | 124-448 |
| Cow position: | chr7:52386062-52385731 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 130-465 |
| Cow position: | chr7:53058551-53058213 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 130-661 |
| Cow position: | chr7:65497556-65497013 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 359 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 143, 13 |
| Conread position: | 130-664 |
| Cow position: | chr7:68894551-68895088 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 354 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 140-498 |
| Cow position: | chr7:41486589-41486948 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 257 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 41, 70 |
| Conread position: | 141-448 |
| Cow position: | chr7:26849713-26850026 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 81 |
| Conread position: | 142-740 |
| Cow position: | chr7:30299371-30299987 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 465 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 37 |
| Conread position: | 143-431 |
| Cow position: | chr7:49415265-49415559 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 42, 13 |
| Conread position: | 238-592 |
| Cow position: | chr7:67810962-67811326 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 32, 285 |
| Conread position: | 339-740 |
| Cow position: | chr7:26850681-26851081 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 313, 0 |
| Conread position: | 358-585 |
| Cow position: | chr7:42299412-42299173 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 28, 174 |
| Conread position: | 124-740 |
| Cow position: | chr8:39159711-39160345 (view UCSC Genome Browser custom track) |
| Alignm length: | 651 |
| Alignm identity: | 467 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 17 |
| Conread position: | 131-732 |
| Cow position: | chr8:38579877-38579276 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 427 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 94 |
| Conread position: | 286-739 |
| Cow position: | chr8:24877114-24876680 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 145, 36 |
| Conread position: | 130-709 |
| Cow position: | chr9:29327097-29327681 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 403 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 12 |
| Conread position: | 140-737 |
| Cow position: | chr9:64158157-64158796 (view UCSC Genome Browser custom track) |
| Alignm length: | 647 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 27 |
| Conread position: | 155-447 |
| Cow position: | chr9:16196807-16196515 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 218 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 26, 70 |
| Conread position: | 202-740 |
| Cow position: | chr9:59509739-59510281 (view UCSC Genome Browser custom track) |
| Alignm length: | 567 |
| Alignm identity: | 414 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 248-737 |
| Cow position: | chr9:54994477-54994955 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 60 |
| Conread position: | 387-740 |
| Cow position: | chr9:3725578-3725955 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 47, 25 |
| Conread position: | 75-257 |
| Cow position: | chrX:29811554-29811744 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 20, 68 |
| Conread position: | 122-587 |
| Cow position: | chrX:41890417-41889938 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 111 |
| Conread position: | 130-504 |
| Cow position: | chrX:19927280-19927658 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 10 |
| Conread position: | 130-630 |
| Cow position: | chrX:29799172-29798659 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 344 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 55, 10 |
| Conread position: | 243-416 |
| Cow position: | chrX:29812023-29812199 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 137 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 283-533 |
| Cow position: | chrX:28876434-28876171 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 189 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 26 |
| Conread position: | 301-571 |
| Cow position: | chrX:6251494-6251216 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 218 |
| Conread position: | 302-739 |
| Cow position: | chrX:27409020-27409473 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 296 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 124, 84 |