Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010013E01.5 |
| Conread position: | 326-661 |
| Cow position: | chr10:37286779-37286442 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 14, 51 |
| Conread position: | 328-715 |
| Cow position: | chr10:1083069-1083445 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 96, 46 |
| Conread position: | 331-556 |
| Cow position: | chr10:15169552-15169329 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 33, 46 |
| Conread position: | 333-542 |
| Cow position: | chr10:9134189-9133981 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 68, 39 |
| Conread position: | 411-730 |
| Cow position: | chr10:1999785-2000095 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 140, 17 |
| Conread position: | 554-713 |
| Cow position: | chr10:15169137-15168980 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 323-531 |
| Cow position: | chr11:42896548-42896753 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 161 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 328-610 |
| Cow position: | chr11:19493397-19493675 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 123, 48 |
| Conread position: | 328-671 |
| Cow position: | chr11:3829596-3829270 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 229 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 250, 5 |
| Conread position: | 333-492 |
| Cow position: | chr11:13783587-13783430 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 420-715 |
| Cow position: | chr11:66879039-66879340 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 323-716 |
| Cow position: | chr12:119656-120046 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 53 |
| Conread position: | 333-570 |
| Cow position: | chr12:29874925-29874695 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 333-715 |
| Cow position: | chr12:18494532-18494908 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 42 |
| Conread position: | 391-652 |
| Cow position: | chr12:2683503-2683760 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 57, 43 |
| Conread position: | 559-714 |
| Cow position: | chr12:1664074-1664228 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 141, 114 |
| Conread position: | 334-735 |
| Cow position: | chr13:51792418-51792806 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 363, 41 |
| Conread position: | 384-666 |
| Cow position: | chr13:26917496-26917776 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 201, 127 |
| Conread position: | 559-730 |
| Cow position: | chr13:48074737-48074572 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 137, 21 |
| Conread position: | 328-715 |
| Cow position: | chr14:40190759-40191142 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 267 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 179, 48 |
| Conread position: | 335-695 |
| Cow position: | chr15:8442038-8441681 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 161, 31 |
| Conread position: | 391-967 |
| Cow position: | chr15:41962158-41961592 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 404 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 565-715 |
| Cow position: | chr15:28060680-28060532 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 22, 57 |
| Conread position: | 328-739 |
| Cow position: | chr16:3766875-3766467 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 279 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 16, 5 |
| Conread position: | 329-715 |
| Cow position: | chr16:52634042-52634417 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 277 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 39, 91 |
| Conread position: | 333-715 |
| Cow position: | chr16:28920609-28920234 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 8, 24 |
| Conread position: | 334-903 |
| Cow position: | chr16:52500892-52501460 (view UCSC Genome Browser custom track) |
| Alignm length: | 584 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 245, 41 |
| Conread position: | 349-713 |
| Cow position: | chr16:53799390-53799744 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 104, 19 |
| Conread position: | 387-731 |
| Cow position: | chr16:5988137-5987803 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 95, 22 |
| Conread position: | 446-706 |
| Cow position: | chr16:30609554-30609808 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 118, 52 |
| Conread position: | 333-715 |
| Cow position: | chr17:864104-864464 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 42 |
| Conread position: | 334-715 |
| Cow position: | chr17:26479475-26479106 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 268 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 104, 8 |
| Conread position: | 376-729 |
| Cow position: | chr17:35130014-35130353 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 297, 66 |
| Conread position: | 328-755 |
| Cow position: | chr18:41191991-41191582 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 283 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 123, 48 |
| Conread position: | 329-531 |
| Cow position: | chr18:42438798-42438996 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 91, 47 |
| Conread position: | 329-607 |
| Cow position: | chr18:38662509-38662783 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 219, 47 |
| Conread position: | 331-512 |
| Cow position: | chr18:1957931-1957752 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 44 |
| Conread position: | 333-747 |
| Cow position: | chr18:22260097-22259689 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 48 |
| Conread position: | 351-720 |
| Cow position: | chr18:37065378-37065026 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 190, 47 |
| Conread position: | 565-715 |
| Cow position: | chr18:42439008-42439156 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 108, 0 |
| Conread position: | 328-471 |
| Cow position: | chr19:48750-48891 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 401-715 |
| Cow position: | chr19:14832889-14832588 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 224 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 160, 101 |
| Conread position: | 413-731 |
| Cow position: | chr19:21047084-21047410 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 110, 15 |
| Conread position: | 484-903 |
| Cow position: | chr19:10745725-10745277 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 304 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 146 |
| Conread position: | 425-715 |
| Cow position: | chr20:5337781-5337504 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 154, 33 |
| Conread position: | 328-906 |
| Cow position: | chr21:11013234-11013818 (view UCSC Genome Browser custom track) |
| Alignm length: | 601 |
| Alignm identity: | 386 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 228, 32 |
| Conread position: | 335-710 |
| Cow position: | chr21:14791574-14791192 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 266 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 214, 119 |
| Conread position: | 336-728 |
| Cow position: | chr21:11022016-11022399 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 262 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 427-696 |
| Cow position: | chr21:34817888-34817618 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 126, 101 |
| Conread position: | 521-728 |
| Cow position: | chr21:33421731-33421936 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 12, 73 |
| Conread position: | 335-903 |
| Cow position: | chr22:33467030-33466454 (view UCSC Genome Browser custom track) |
| Alignm length: | 593 |
| Alignm identity: | 380 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 75, 35 |
| Conread position: | 402-715 |
| Cow position: | chr22:5925209-5924897 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 214 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 123, 43 |
| Conread position: | 428-768 |
| Cow position: | chr22:15048128-15047789 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 326-531 |
| Cow position: | chr23:38062501-38062294 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 6, 52 |
| Conread position: | 328-715 |
| Cow position: | chr24:24211123-24210761 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 262 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 45 |
| Conread position: | 397-729 |
| Cow position: | chr24:38568119-38567794 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 164, 51 |
| Conread position: | 457-715 |
| Cow position: | chr24:33420748-33421011 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 55, 46 |
| Conread position: | 515-715 |
| Cow position: | chr24:21782528-21782328 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 25, 84 |
| Conread position: | 328-715 |
| Cow position: | chr25:13311702-13312081 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 232, 27 |
| Conread position: | 333-720 |
| Cow position: | chr25:12338976-12338614 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 365, 22 |
| Conread position: | 338-727 |
| Cow position: | chr25:20240285-20240654 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 359, 38 |
| Conread position: | 345-532 |
| Cow position: | chr25:23207050-23207234 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 169, 64 |
| Conread position: | 478-715 |
| Cow position: | chr25:31232918-31233151 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 44, 25 |
| Conread position: | 501-715 |
| Cow position: | chr25:23814931-23814719 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 63, 72 |
| Conread position: | 701-996 |
| Cow position: | chr25:30087564-30087256 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 16, 22 |
| Conread position: | 328-715 |
| Cow position: | chr26:10481300-10480915 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 16 |
| Conread position: | 334-499 |
| Cow position: | chr26:17798413-17798248 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 86, 42 |
| Conread position: | 410-903 |
| Cow position: | chr26:16221441-16220941 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 322 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 70, 124 |
| Conread position: | 420-1171 |
| Cow position: | chr26:14569521-14570272 (view UCSC Genome Browser custom track) |
| Alignm length: | 770 |
| Alignm identity: | 489 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 355, 28 |
| Conread position: | 342-730 |
| Cow position: | chr27:9298817-9298437 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 215, 34 |
| Conread position: | 448-715 |
| Cow position: | chr27:24063851-24064124 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 53, 230 |
| Conread position: | 389-713 |
| Cow position: | chr28:11860155-11859839 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 332-720 |
| Cow position: | chr29:10120512-10120875 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 257 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 40, 46 |
| Conread position: | 333-668 |
| Cow position: | chr29:29732155-29732481 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 313, 43 |
| Conread position: | 335-594 |
| Cow position: | chr29:12984624-12984370 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 206, 20 |
| Conread position: | 1-1263 |
| Cow position: | chr3:5856855-5858110 (view UCSC Genome Browser custom track) |
| Alignm length: | 1294 |
| Alignm identity: | 958 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 230, 98 |
| Conread position: | 322-534 |
| Cow position: | chr3:5446985-5447196 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 55 |
| Conread position: | 333-715 |
| Cow position: | chr3:53401488-53401116 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 333-715 |
| Cow position: | chr3:58546300-58546671 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 269 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 225, 8 |
| Conread position: | 339-570 |
| Cow position: | chr3:65863732-65863961 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 208, 9 |
| Conread position: | 345-715 |
| Cow position: | chr3:21131955-21132326 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 249 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 70, 31 |
| Conread position: | 473-719 |
| Cow position: | chr3:4216922-4216673 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 53, 33 |
| Conread position: | 538-729 |
| Cow position: | chr3:5447224-5447410 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 323-729 |
| Cow position: | chr4:47679878-47680282 (view UCSC Genome Browser custom track) |
| Alignm length: | 414 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 50 |
| Conread position: | 328-585 |
| Cow position: | chr4:31547086-31546834 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 329-729 |
| Cow position: | chr4:14208449-14208837 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 31 |
| Conread position: | 333-715 |
| Cow position: | chr4:14417420-14417049 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 256 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 7, 70 |
| Conread position: | 333-715 |
| Cow position: | chr4:37997453-37997834 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 42 |
| Conread position: | 335-663 |
| Cow position: | chr4:57650014-57649677 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 67, 29 |
| Conread position: | 389-729 |
| Cow position: | chr4:27446725-27447051 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 116, 84 |
| Conread position: | 444-660 |
| Cow position: | chr4:19492877-19492659 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 119, 67 |
| Conread position: | 328-472 |
| Cow position: | chr5:32678074-32678214 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 329-733 |
| Cow position: | chr5:50248702-50249096 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 151, 47 |
| Conread position: | 333-715 |
| Cow position: | chr5:49094376-49094738 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 258 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 60, 50 |
| Conread position: | 334-685 |
| Cow position: | chr5:32679141-32678809 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 215, 8 |
| Conread position: | 334-715 |
| Cow position: | chr5:9578996-9578617 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 248, 42 |
| Conread position: | 396-715 |
| Cow position: | chr5:2488223-2487912 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 230 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 82, 30 |
| Conread position: | 410-736 |
| Cow position: | chr5:28887302-28887630 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 219 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 130, 19 |
| Conread position: | 328-715 |
| Cow position: | chr6:8137193-8136819 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 261 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 117, 45 |
| Conread position: | 328-715 |
| Cow position: | chr6:50026081-50026457 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 48 |
| Conread position: | 330-714 |
| Cow position: | chr6:54319597-54319215 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 45 |
| Conread position: | 333-499 |
| Cow position: | chr6:26237127-26236963 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 380-715 |
| Cow position: | chr6:45494138-45494474 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 121 |
| Conread position: | 328-525 |
| Cow position: | chr7:40498349-40498541 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 41, 48 |
| Conread position: | 331-715 |
| Cow position: | chr7:48498021-48497651 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 6, 46 |
| Conread position: | 333-906 |
| Cow position: | chr7:20388731-20388134 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 412 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 43 |
| Conread position: | 394-730 |
| Cow position: | chr7:26768233-26767904 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 179, 81 |
| Conread position: | 565-907 |
| Cow position: | chr7:40487287-40487614 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 19, 59 |
| Conread position: | 328-732 |
| Cow position: | chr8:50710635-50711043 (view UCSC Genome Browser custom track) |
| Alignm length: | 423 |
| Alignm identity: | 280 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 10, 51 |
| Conread position: | 329-729 |
| Cow position: | chr8:23495052-23494664 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 268 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 229, 30 |
| Conread position: | 335-706 |
| Cow position: | chr8:47173602-47173251 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 338-714 |
| Cow position: | chr8:22213558-22213922 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 180, 43 |
| Conread position: | 376-713 |
| Cow position: | chr8:12192536-12192207 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 75, 65 |
| Conread position: | 562-715 |
| Cow position: | chr8:23514693-23514847 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 36, 113 |
| Conread position: | 573-907 |
| Cow position: | chr8:23503279-23502938 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 124, 82 |
| Conread position: | 320-715 |
| Cow position: | chr9:24231328-24231711 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 266 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 376, 13 |
| Conread position: | 326-667 |
| Cow position: | chr9:23399102-23398762 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 51 |
| Conread position: | 327-729 |
| Cow position: | chr9:18786351-18786757 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 51 |
| Conread position: | 327-729 |
| Cow position: | chr9:26512611-26512220 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 275 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 49 |
| Conread position: | 328-542 |
| Cow position: | chr9:34165046-34164835 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 208, 48 |
| Conread position: | 328-595 |
| Cow position: | chr9:62112073-62112332 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 190 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 328-707 |
| Cow position: | chr9:845390-845015 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 77 |
| Conread position: | 333-714 |
| Cow position: | chr9:20887677-20887295 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 268 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 231, 42 |
| Conread position: | 333-714 |
| Cow position: | chr9:22450498-22450867 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 365, 49 |
| Conread position: | 335-729 |
| Cow position: | chr9:25441691-25442062 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 277 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 118, 33 |
| Conread position: | 410-661 |
| Cow position: | chr9:20501570-20501321 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 150, 18 |
| Conread position: | 313-732 |
| Cow position: | chrX:9588076-9587678 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 284 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 16, 64 |
| Conread position: | 323-715 |
| Cow position: | chrX:35670829-35671215 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 16, 55 |
| Conread position: | 328-727 |
| Cow position: | chrX:35821692-35822083 (view UCSC Genome Browser custom track) |
| Alignm length: | 405 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 48 |
| Conread position: | 329-664 |
| Cow position: | chrX:35048139-35048464 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 46 |
| Conread position: | 329-727 |
| Cow position: | chrX:39519740-39519350 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 269 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 253, 44 |
| Conread position: | 334-750 |
| Cow position: | chrX:29675883-29676274 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 292 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 90, 40 |
| Conread position: | 336-508 |
| Cow position: | chrX:20853708-20853878 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 336-736 |
| Cow position: | chrX:36808743-36809138 (view UCSC Genome Browser custom track) |
| Alignm length: | 404 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 39 |
| Conread position: | 410-715 |
| Cow position: | chrX:29376741-29377043 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 211 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 150, 18 |
| Conread position: | 454-722 |
| Cow position: | chrX:395362-395628 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 5, 50 |
| Conread position: | 554-731 |
| Cow position: | chrX:38736024-38735852 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 74, 63 |