Cow genome map
| Conread name: | Ss1.1-Liv1-LVR010055D02.5 |
| Conread position: | 49-1901 |
| Cow position: | chr10:51572812-51570951 (view UCSC Genome Browser custom track) |
| Alignm length: | 1862 |
| Alignm identity: | 1369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 481-593 |
| Cow position: | chr11:77078843-77078731 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 988-1214 |
| Cow position: | chr11:77078406-77078180 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1398-1910 |
| Cow position: | chr11:77077274-77076759 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 270 |
| Conread position: | 1600-2125 |
| Cow position: | chr11:15266677-15266152 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 279, 55 |
| Conread position: | 448-845 |
| Cow position: | chr13:9236269-9236655 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 260 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 121, 45 |
| Conread position: | 1830-2261 |
| Cow position: | chr13:33904589-33904192 (view UCSC Genome Browser custom track) |
| Alignm length: | 439 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 131 |
| Conread position: | 2104-2253 |
| Cow position: | chr13:24662455-24662617 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 31, 96 |
| Conread position: | 57-271 |
| Cow position: | chr15:23818676-23818462 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 271-477 |
| Cow position: | chr15:23818168-23817962 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 476-632 |
| Cow position: | chr15:23817816-23817660 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-1186 |
| Cow position: | chr15:23817580-23817023 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 523 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1182-1391 |
| Cow position: | chr15:23816822-23816613 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1388-1599 |
| Cow position: | chr15:23816376-23816164 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 0 |
| Conread position: | 1578-1821 |
| Cow position: | chr15:23815988-23815745 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1820-2234 |
| Cow position: | chr15:23815459-23815031 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 255 |
| Conread position: | 1093-1258 |
| Cow position: | chr16:721278-721445 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 1391-1917 |
| Cow position: | chr16:721458-721983 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 18 |
| Conread position: | 1570-2026 |
| Cow position: | chr16:9834750-9834283 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 415 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 347, 297 |
| Conread position: | 1466-1667 |
| Cow position: | chr17:16246052-16245854 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 109, 118 |
| Conread position: | 1903-2113 |
| Cow position: | chr2:3084967-3085176 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 135, 109 |
| Conread position: | 2086-2249 |
| Cow position: | chr2:3085316-3085476 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 59, 6 |
| Conread position: | 71-1902 |
| Cow position: | chr23:23436099-23434268 (view UCSC Genome Browser custom track) |
| Alignm length: | 1834 |
| Alignm identity: | 1380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 559, 570 |
| Conread position: | 88-2006 |
| Cow position: | chr23:23438430-23440333 (view UCSC Genome Browser custom track) |
| Alignm length: | 1920 |
| Alignm identity: | 1408 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 1629, 1633 |
| Conread position: | 1909-2262 |
| Cow position: | chr28:1270736-1271091 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 154 |
| Conread position: | 6-724 |
| Cow position: | chr3:47919977-47920686 (view UCSC Genome Browser custom track) |
| Alignm length: | 719 |
| Alignm identity: | 581 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 74-1898 |
| Cow position: | chr3:19185639-19183814 (view UCSC Genome Browser custom track) |
| Alignm length: | 1828 |
| Alignm identity: | 1343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 337 |
| Conread position: | 968-2241 |
| Cow position: | chr3:47920750-47922042 (view UCSC Genome Browser custom track) |
| Alignm length: | 1301 |
| Alignm identity: | 1122 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 224, 350 |
| Conread position: | 1506-1758 |
| Cow position: | chr3:81429958-81430202 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 85, 36 |
| Conread position: | 1490-1963 |
| Cow position: | chr4:1890552-1890096 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 325 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 352, 50 |
| Conread position: | 1184-1755 |
| Cow position: | chr9:52843372-52843917 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 374 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 12, 93 |