Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010017D03.5 |
| Conread position: | 103-1475 |
| Cow position: | chr13:25592917-25591537 (view UCSC Genome Browser custom track) |
| Alignm length: | 1385 |
| Alignm identity: | 1316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 734, 1220 |
| Conread position: | 3-1452 |
| Cow position: | chr16:5070095-5068652 (view UCSC Genome Browser custom track) |
| Alignm length: | 1459 |
| Alignm identity: | 1347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 198 |
| Conread position: | 323-466 |
| Cow position: | chr29:43794747-43794604 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 751-890 |
| Cow position: | chr29:43783286-43783147 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 136-221 |
| Cow position: | chr5:1994710-1994625 (view UCSC Genome Browser custom track) |
| Alignm length: | 86 |
| Alignm identity: | 86 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-324 |
| Cow position: | chr5:1993209-1993103 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 107 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 323-466 |
| Cow position: | chr5:1986135-1985992 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 139 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 465-548 |
| Cow position: | chr5:1985760-1985677 (view UCSC Genome Browser custom track) |
| Alignm length: | 84 |
| Alignm identity: | 82 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 542-677 |
| Cow position: | chr5:1984995-1984860 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 128 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 675-748 |
| Cow position: | chr5:1983676-1983603 (view UCSC Genome Browser custom track) |
| Alignm length: | 74 |
| Alignm identity: | 71 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 745-891 |
| Cow position: | chr5:1982812-1982666 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 879-1034 |
| Cow position: | chr5:1982241-1982086 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 147 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1054-1177 |
| Cow position: | chr5:1980687-1980564 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 117 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1257-1332 |
| Cow position: | chr5:1978264-1978191 (view UCSC Genome Browser custom track) |
| Alignm length: | 76 |
| Alignm identity: | 73 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1334-1687 |
| Cow position: | chr5:1977500-1977136 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 118 |
| Conread position: | 1700-1824 |
| Cow position: | chr5:1977824-1977700 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1823-2666 |
| Cow position: | chr5:1977009-1976127 (view UCSC Genome Browser custom track) |
| Alignm length: | 896 |
| Alignm identity: | 702 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 86 |
| Conread position: | 2672-2904 |
| Cow position: | chr5:1976141-1975895 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 206 |
| Conread position: | 1-136 |
| Cow position: | chr6:46285951-46285807 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 306-474 |
| Cow position: | chr6:46285828-46285658 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 489-1458 |
| Cow position: | chr6:46285664-46284707 (view UCSC Genome Browser custom track) |
| Alignm length: | 972 |
| Alignm identity: | 919 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 527, 826 |
| Conread position: | 821-1208 |
| Cow position: | chr6:26456815-26457194 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 124 |
| Conread position: | 358-1468 |
| Cow position: | chrX:41759611-41760700 (view UCSC Genome Browser custom track) |
| Alignm length: | 1118 |
| Alignm identity: | 933 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 127 |