Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010027D07.5 |
| Conread position: | 1-96 |
| Cow position: | chr1:102528697-102528602 (view UCSC Genome Browser custom track) |
| Alignm length: | 96 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-269 |
| Cow position: | chr1:102528717-102528593 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 269-1403 |
| Cow position: | chr1:102528386-102527296 (view UCSC Genome Browser custom track) |
| Alignm length: | 1141 |
| Alignm identity: | 894 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 145 |
| Conread position: | 1080-1896 |
| Cow position: | chr1:42555450-42556257 (view UCSC Genome Browser custom track) |
| Alignm length: | 818 |
| Alignm identity: | 782 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 521, 416 |
| Conread position: | 1346-1711 |
| Cow position: | chr1:102527240-102526875 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 9 |
| Conread position: | 1731-1832 |
| Cow position: | chr1:102526874-102526773 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-94 |
| Cow position: | chr10:15811670-15811577 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-269 |
| Cow position: | chr10:15811690-15811566 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 116 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 296-576 |
| Cow position: | chr10:15787552-15787272 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 572-652 |
| Cow position: | chr10:15785062-15784982 (view UCSC Genome Browser custom track) |
| Alignm length: | 81 |
| Alignm identity: | 79 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 696-858 |
| Cow position: | chr10:15768946-15768784 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 861-972 |
| Cow position: | chr10:15768263-15768152 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 971-1136 |
| Cow position: | chr10:15767916-15767751 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1131-1904 |
| Cow position: | chr10:15767657-15766890 (view UCSC Genome Browser custom track) |
| Alignm length: | 776 |
| Alignm identity: | 739 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 434 |
| Conread position: | 327-565 |
| Cow position: | chr14:48990013-48989775 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 174 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-94 |
| Cow position: | chr25:14461540-14461633 (view UCSC Genome Browser custom track) |
| Alignm length: | 94 |
| Alignm identity: | 81 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 145-652 |
| Cow position: | chr25:14461520-14462027 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 451 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 501 |
| Conread position: | 649-1495 |
| Cow position: | chr25:14462063-14462884 (view UCSC Genome Browser custom track) |
| Alignm length: | 852 |
| Alignm identity: | 760 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 290, 376 |
| Conread position: | 1502-1891 |
| Cow position: | chr25:14463176-14463561 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 339, 62 |
| Conread position: | 1110-1506 |
| Cow position: | chr27:10659436-10659825 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 145-1405 |
| Cow position: | chr28:9282876-9284138 (view UCSC Genome Browser custom track) |
| Alignm length: | 1270 |
| Alignm identity: | 1142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 428, 111 |
| Conread position: | 1405-1543 |
| Cow position: | chr28:9284178-9284310 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 1516-1873 |
| Cow position: | chr28:9284824-9285163 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 1642-1890 |
| Cow position: | chr4:42967626-42967379 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 127 |
| Conread position: | 1237-1904 |
| Cow position: | chr7:52262703-52262057 (view UCSC Genome Browser custom track) |
| Alignm length: | 674 |
| Alignm identity: | 607 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 554, 151 |