Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010036F09.5.5 |
| Conread position: | 418-668 |
| Cow position: | chr20:36655627-36655873 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 100-400 |
| Cow position: | chr23:23177867-23177569 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 213 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 113-385 |
| Cow position: | chr23:23096967-23096696 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 118-385 |
| Cow position: | chr23:20551142-20551409 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-385 |
| Cow position: | chr23:21180741-21180474 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 118-385 |
| Cow position: | chr23:23022929-23022662 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 203 |
| Conread position: | 118-385 |
| Cow position: | chr23:23049471-23049204 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 200 |
| Conread position: | 376-660 |
| Cow position: | chr23:21180287-21180003 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 376-660 |
| Cow position: | chr23:23022459-23022176 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 114 |
| Conread position: | 376-660 |
| Cow position: | chr23:23049041-23048757 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 201, 209 |
| Conread position: | 376-660 |
| Cow position: | chr23:23096509-23096228 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 377-660 |
| Cow position: | chr23:20551600-20551882 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 377-660 |
| Cow position: | chr23:23177323-23177038 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 157 |
| Conread position: | 443-660 |
| Cow position: | chr23:24589535-24589754 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 43, 67 |
| Conread position: | 658-828 |
| Cow position: | chr23:23176142-23175972 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 145 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-935 |
| Cow position: | chr23:23048188-23047911 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-936 |
| Cow position: | chr23:20553184-20553462 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-936 |
| Cow position: | chr23:21000454-21000732 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-936 |
| Cow position: | chr23:21179119-21178841 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-936 |
| Cow position: | chr23:23021253-23020975 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 658-936 |
| Cow position: | chr23:23093772-23093494 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 659-936 |
| Cow position: | chr23:24591581-24591855 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 936-1061 |
| Cow position: | chr23:20553571-20553700 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 936-1061 |
| Cow position: | chr23:23020859-23020734 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 105 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 115, 47 |
| Conread position: | 936-1062 |
| Cow position: | chr23:23175802-23175682 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 115, 61 |
| Conread position: | 936-1063 |
| Cow position: | chr23:21178724-21178599 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 115, 55 |
| Conread position: | 936-1063 |
| Cow position: | chr23:23047794-23047665 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 936-1063 |
| Cow position: | chr23:23093378-23093250 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 936-1066 |
| Cow position: | chr23:24591966-24592091 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 105 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 115, 62 |
| Conread position: | 1130-1280 |
| Cow position: | chr23:23046867-23046727 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1130-1329 |
| Cow position: | chr23:20554526-20554727 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 46, 71 |
| Conread position: | 1130-1352 |
| Cow position: | chr23:21177812-21177585 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 129, 38 |
| Conread position: | 1130-1352 |
| Cow position: | chr23:23092455-23092244 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 1130-1548 |
| Cow position: | chr23:24592887-24593296 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 35 |
| Conread position: | 1444-1548 |
| Cow position: | chr23:21177486-21177382 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 88 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 66, 36 |
| Conread position: | 447-660 |
| Cow position: | chr3:62244562-62244348 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 150, 161 |
| Conread position: | 658-936 |
| Cow position: | chr3:62210835-62210558 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 659-936 |
| Cow position: | chr3:62243731-62243454 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 710-936 |
| Cow position: | chr7:27038140-27037914 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |