Cow genome map
| Conread name: | Ss1.1-Lng1-LNG010091F05.5 |
| Conread position: | 346-545 |
| Cow position: | chr1:94031190-94030991 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 19, 51 |
| Conread position: | 350-546 |
| Cow position: | chr1:46287521-46287711 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 12, 129 |
| Conread position: | 359-552 |
| Cow position: | chr1:70438160-70437967 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 46, 39 |
| Conread position: | 344-518 |
| Cow position: | chr10:10089404-10089580 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 21, 127 |
| Conread position: | 361-525 |
| Cow position: | chr10:52987384-52987220 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 123 |
| Conread position: | 317-517 |
| Cow position: | chr11:15064151-15064352 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 48, 120 |
| Conread position: | 339-520 |
| Cow position: | chr11:38807889-38808070 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 32, 99 |
| Conread position: | 341-520 |
| Cow position: | chr11:78903315-78903136 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 13 |
| Conread position: | 133-405 |
| Cow position: | chr13:10526228-10525953 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 403-894 |
| Cow position: | chr13:10525815-10525324 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 378 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 83 |
| Conread position: | 339-549 |
| Cow position: | chr14:46971200-46970991 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 26, 61 |
| Conread position: | 339-525 |
| Cow position: | chr16:37391651-37391839 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 149 |
| Conread position: | 341-545 |
| Cow position: | chr16:19045210-19045009 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 59 |
| Conread position: | 342-511 |
| Cow position: | chr17:33310822-33310991 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 104, 136 |
| Conread position: | 369-520 |
| Cow position: | chr17:7895306-7895454 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 341-554 |
| Cow position: | chr18:17982915-17983124 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 11 |
| Conread position: | 319-549 |
| Cow position: | chr19:8697675-8697444 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 21, 169 |
| Conread position: | 341-533 |
| Cow position: | chr19:18392863-18393057 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 319-545 |
| Cow position: | chr2:72102672-72102898 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 163 |
| Conread position: | 346-549 |
| Cow position: | chr2:60050201-60050404 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 18, 66 |
| Conread position: | 335-521 |
| Cow position: | chr21:10086020-10085832 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 344-523 |
| Cow position: | chr21:38003243-38003422 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 75, 52 |
| Conread position: | 348-523 |
| Cow position: | chr22:12231577-12231753 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 133 |
| Conread position: | 3-116 |
| Cow position: | chr23:16881056-16881174 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 330-548 |
| Cow position: | chr23:35401963-35402179 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 118 |
| Conread position: | 341-523 |
| Cow position: | chr23:2115034-2114850 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 29, 145 |
| Conread position: | 361-533 |
| Cow position: | chr23:13575540-13575367 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 327-520 |
| Cow position: | chr24:35168451-35168645 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 15, 28 |
| Conread position: | 330-523 |
| Cow position: | chr25:20220188-20220382 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 70 |
| Conread position: | 3-116 |
| Cow position: | chr26:33242010-33241892 (view UCSC Genome Browser custom track) |
| Alignm length: | 119 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 312-548 |
| Cow position: | chr26:21341818-21341582 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 175 |
| Conread position: | 331-523 |
| Cow position: | chr27:26891693-26891499 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 45 |
| Conread position: | 329-512 |
| Cow position: | chr29:8587019-8586836 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 83, 92 |
| Conread position: | 334-516 |
| Cow position: | chr3:16751875-16751692 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 7, 85 |
| Conread position: | 340-549 |
| Cow position: | chr5:50226386-50226594 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 101 |
| Conread position: | 341-543 |
| Cow position: | chr5:31059847-31060048 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 22, 78 |
| Conread position: | 335-525 |
| Cow position: | chr6:35099864-35100056 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 30, 65 |
| Conread position: | 339-545 |
| Cow position: | chr6:9344208-9344410 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 60 |
| Conread position: | 339-533 |
| Cow position: | chr7:37581115-37581309 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 107, 7 |
| Conread position: | 346-549 |
| Cow position: | chr7:16529355-16529559 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 367-544 |
| Cow position: | chr7:8046994-8046821 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 82, 117 |
| Conread position: | 299-544 |
| Cow position: | chr8:34573119-34572873 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 329-520 |
| Cow position: | chr8:56891877-56892064 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 32, 9 |
| Conread position: | 357-569 |
| Cow position: | chr8:14601324-14601531 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 80, 93 |
| Conread position: | 321-518 |
| Cow position: | chr9:11875878-11876081 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 15, 81 |
| Conread position: | 327-525 |
| Cow position: | chr9:40553307-40553109 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 353-520 |
| Cow position: | chr9:9514059-9513892 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 93, 135 |
| Conread position: | 341-523 |
| Cow position: | chrX:23139375-23139560 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 24, 112 |
| Conread position: | 341-525 |
| Cow position: | chrX:41193482-41193667 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 28, 78 |