Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8031L04.3.5 |
| Conread position: | 3186-3562 |
| Cow position: | chr1:54076491-54076870 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 25 |
| Conread position: | 3533-3888 |
| Cow position: | chr1:54076921-54077278 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 318 |
| Conread position: | 601-939 |
| Cow position: | chr11:36230882-36231231 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 984-1137 |
| Cow position: | chr11:36231239-36231388 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 100 |
| Conread position: | 1211-1542 |
| Cow position: | chr11:36231396-36231712 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 104 |
| Conread position: | 1567-1969 |
| Cow position: | chr11:36231715-36232101 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 187, 38 |
| Conread position: | 3425-3885 |
| Cow position: | chr13:19795394-19795858 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 421 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 320 |
| Conread position: | 146-747 |
| Cow position: | chr14:48280366-48280942 (view UCSC Genome Browser custom track) |
| Alignm length: | 604 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 501, 15 |
| Conread position: | 943-1171 |
| Cow position: | chr14:48281038-48281269 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 54, 36 |
| Conread position: | 1218-1958 |
| Cow position: | chr14:48281607-48282333 (view UCSC Genome Browser custom track) |
| Alignm length: | 763 |
| Alignm identity: | 555 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 21 |
| Conread position: | 30-170 |
| Cow position: | chr5:20477159-20477299 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 133 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-397 |
| Cow position: | chr5:20478258-20478485 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 216 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 380-496 |
| Cow position: | chr5:20479856-20479972 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 550-686 |
| Cow position: | chr5:20481915-20482051 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 129 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 687-825 |
| Cow position: | chr5:20484598-20484736 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 127 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 820-1000 |
| Cow position: | chr5:20484811-20484991 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 166 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 997-1242 |
| Cow position: | chr5:20489255-20489485 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 0 |
| Conread position: | 1241-1340 |
| Cow position: | chr5:20490487-20490586 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 93 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1341-1554 |
| Cow position: | chr5:20491317-20491530 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1609-1717 |
| Cow position: | chr5:20492611-20492719 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 98 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1715-1788 |
| Cow position: | chr5:20492958-20493031 (view UCSC Genome Browser custom track) |
| Alignm length: | 74 |
| Alignm identity: | 72 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1790-3871 |
| Cow position: | chr5:20493403-20495483 (view UCSC Genome Browser custom track) |
| Alignm length: | 2141 |
| Alignm identity: | 1793 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 293, 215 |