Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8039H01.5 |
| Conread position: | 297-410 |
| Cow position: | chr13:19902377-19902490 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 93 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-410 |
| Cow position: | chr19:37398338-37398476 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-404 |
| Cow position: | chr5:19864148-19863929 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 11 |
| Conread position: | 185-410 |
| Cow position: | chr5:20281294-20281069 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 185-419 |
| Cow position: | chr5:20227373-20227139 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-404 |
| Cow position: | chr5:19830955-19830737 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-410 |
| Cow position: | chr5:19818626-19818850 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 10 |
| Conread position: | 186-410 |
| Cow position: | chr5:19881473-19881249 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 69 |
| Conread position: | 186-410 |
| Cow position: | chr5:20074398-20074174 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-410 |
| Cow position: | chr5:20093857-20093633 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 51 |
| Conread position: | 186-410 |
| Cow position: | chr5:20116545-20116321 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 51 |
| Conread position: | 186-410 |
| Cow position: | chr5:20374691-20374467 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 186-417 |
| Cow position: | chr5:19849140-19848910 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 10 |
| Conread position: | 186-422 |
| Cow position: | chr5:19897680-19897445 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 226, 0 |
| Conread position: | 187-410 |
| Cow position: | chr5:19986849-19986626 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-410 |
| Cow position: | chr5:20005647-20005424 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 187-410 |
| Cow position: | chr5:20023278-20023055 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 191-427 |
| Cow position: | chr5:20259101-20258866 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 0 |
| Conread position: | 195-401 |
| Cow position: | chr5:19679022-19679222 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 116, 139 |
| Conread position: | 195-404 |
| Cow position: | chr5:19690083-19690292 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 163 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-404 |
| Cow position: | chr5:19755771-19755562 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 162 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-404 |
| Cow position: | chr5:19784715-19784506 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 195-432 |
| Cow position: | chr5:20057301-20057065 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 217, 0 |
| Conread position: | 196-404 |
| Cow position: | chr5:19772107-19772315 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 159 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 196-410 |
| Cow position: | chr5:20314749-20314535 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 199-410 |
| Cow position: | chr5:20330320-20330109 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 199-424 |
| Cow position: | chr5:20298352-20298128 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 0 |
| Conread position: | 207-410 |
| Cow position: | chr5:20191526-20191323 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 156 |
| Alignm E-value: | 6.00036e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 208-410 |
| Cow position: | chr5:20131444-20131242 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-410 |
| Cow position: | chr5:19570219-19570028 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 260-410 |
| Cow position: | chr5:19746415-19746565 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-420 |
| Cow position: | chr5:24472601-24472748 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 9e-36 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 299-404 |
| Cow position: | chr7:17930036-17930144 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 93 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 13, 0 |