Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-Pig4-TMW8050B04.5
        

               Conread position:
               343-477
               

               Cow position:
               chr10:9028008-9028142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               79, 86
               

               Conread position:
               657-923
               

               Cow position:
               chr10:9031398-9031664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-928
               

               Cow position:
               chr10:9010339-9010068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               249, 244
               

               Conread position:
               657-937
               

               Cow position:
               chr10:8996359-8996079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-937
               

               Cow position:
               chr10:8996695-8996415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               59, 66
               

               Conread position:
               657-939
               

               Cow position:
               chr10:8996779-8996497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               657-940
               

               Cow position:
               chr10:9010255-9009972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr10:9031314-9031597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr10:9010507-9010219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               60, 69
               

               Conread position:
               657-948
               

               Cow position:
               chr10:8996275-8995984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-936
               

               Cow position:
               chr10:8996524-8996248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               70, 57
               

               Conread position:
               661-939
               

               Cow position:
               chr10:8996607-8996329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               670-936
               

               Cow position:
               chr10:8996430-8996164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-936
               

               Cow position:
               chr10:21939081-21938816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               671-940
               

               Cow position:
               chr10:8996849-8996580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               19, 11
               

               Conread position:
               704-936
               

               Cow position:
               chr10:21939132-21938900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               23, 13
               

               Conread position:
               743-945
               

               Cow position:
               chr10:9031316-9031518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr11:74554954-74554675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr11:74554618-74554336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               657-939
               

               Cow position:
               chr11:74555038-74554756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr11:74554534-74554251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               659-936
               

               Cow position:
               chr11:74554784-74554507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               670-945
               

               Cow position:
               chr11:74554437-74554164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               263, 0
               

               Conread position:
               672-936
               

               Cow position:
               chr11:74555107-74554843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 78
               

               Conread position:
               729-945
               

               Cow position:
               chr11:74554630-74554414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               756-940
               

               Cow position:
               chr11:74555107-74554923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               343-480
               

               Cow position:
               chr13:39980968-39981105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               101
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               637-938
               

               Cow position:
               chr13:39984030-39984331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               200
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 78
               

               Conread position:
               649-940
               

               Cow position:
               chr13:39984378-39984669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               75, 66
               

               Conread position:
               656-918
               

               Cow position:
               chr13:39984637-39984899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               60, 67
               

               Conread position:
               656-938
               

               Cow position:
               chr13:39984133-39984415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-940
               

               Cow position:
               chr13:39984301-39984585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-940
               

               Cow position:
               chr13:39984469-39984753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-940
               

               Cow position:
               chr13:39984553-39984837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               144, 151
               

               Conread position:
               657-945
               

               Cow position:
               chr13:56292132-56291843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               271, 0
               

               Conread position:
               659-936
               

               Cow position:
               chr13:56333700-56333977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               152, 142
               

               Conread position:
               661-932
               

               Cow position:
               chr13:56333618-56333889 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               75, 64
               

               Conread position:
               667-938
               

               Cow position:
               chr13:39983893-39984163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               18, 10
               

               Conread position:
               670-940
               

               Cow position:
               chr13:39983979-39984249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               673-940
               

               Cow position:
               chr13:39984234-39984501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               47, 40
               

               Conread position:
               722-881
               

               Cow position:
               chr13:56334108-56334267 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               638-945
               

               Cow position:
               chr14:25783982-25784289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               203
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               258, 254
               

               Conread position:
               646-946
               

               Cow position:
               chr14:25783402-25783702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               237, 250
               

               Conread position:
               647-945
               

               Cow position:
               chr14:25784327-25784625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               249, 245
               

               Conread position:
               656-879
               

               Cow position:
               chr14:25784504-25784727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-940
               

               Cow position:
               chr14:25794526-25794241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               656-945
               

               Cow position:
               chr14:25784168-25784457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               227, 240
               

               Conread position:
               656-946
               

               Cow position:
               chr14:25783748-25784038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-947
               

               Cow position:
               chr14:25783580-25783871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-37
               

               Alignm gaps (pig, cow):
               227, 240
               

               Conread position:
               657-879
               

               Cow position:
               chr14:25794693-25794471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               50, 66
               

               Conread position:
               657-881
               

               Cow position:
               chr14:3156051-3156275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-935
               

               Cow position:
               chr14:25910984-25911262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               16, 6
               

               Conread position:
               657-936
               

               Cow position:
               chr14:3100934-3100657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               160, 38
               

               Conread position:
               657-936
               

               Cow position:
               chr14:3101434-3101156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               143, 110
               

               Conread position:
               657-936
               

               Cow position:
               chr14:25836368-25836647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr14:25836620-25836899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-936
               

               Cow position:
               chr14:25876724-25877003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               81, 74
               

               Conread position:
               657-936
               

               Cow position:
               chr14:25876892-25877171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               657-938
               

               Cow position:
               chr14:3156135-3156416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr14:25784253-25784536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr14:25783665-25783953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               236, 213
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25783329-25783618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25783497-25783786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25783917-25784206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25784085-25784374 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25784421-25784710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               184
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25794861-25794572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25794945-25794656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25795449-25795160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               29, 24
               

               Conread position:
               657-946
               

               Cow position:
               chr14:25859589-25859878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               33, 25
               

               Conread position:
               659-936
               

               Cow position:
               chr14:3127615-3127338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-937
               

               Cow position:
               chr14:3127699-3127421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-945
               

               Cow position:
               chr14:25794775-25794489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               140, 148
               

               Conread position:
               661-937
               

               Cow position:
               chr14:25795277-25795001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               232, 215
               

               Conread position:
               665-933
               

               Cow position:
               chr14:25860185-25860453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               135, 142
               

               Conread position:
               665-935
               

               Cow position:
               chr14:25794433-25794162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               104, 227
               

               Conread position:
               667-938
               

               Cow position:
               chr14:3155404-3155675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               670-939
               

               Cow position:
               chr14:3155980-3156249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               670-945
               

               Cow position:
               chr14:25795352-25795077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 57
               

               Conread position:
               671-881
               

               Cow position:
               chr14:25836970-25837180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               51, 45
               

               Conread position:
               671-936
               

               Cow position:
               chr14:3080175-3079910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               214, 241
               

               Conread position:
               671-936
               

               Cow position:
               chr14:3127771-3127506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-937
               

               Cow position:
               chr14:3080091-3079825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-937
               

               Cow position:
               chr14:25836550-25836816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-945
               

               Cow position:
               chr14:25876654-25876928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               672-935
               

               Cow position:
               chr14:447925-448188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               675-945
               

               Cow position:
               chr14:25794591-25794320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               253, 0
               

               Conread position:
               689-939
               

               Cow position:
               chr14:3101151-3100904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               38, 28
               

               Conread position:
               728-945
               

               Cow position:
               chr14:25783904-25784121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               155, 168
               

               Conread position:
               735-940
               

               Cow position:
               chr14:447568-447773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               152, 176
               

               Conread position:
               749-939
               

               Cow position:
               chr14:3127777-3127587 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-935
               

               Cow position:
               chr16:14627181-14626902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               72, 60
               

               Conread position:
               656-940
               

               Cow position:
               chr16:14627349-14627065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-945
               

               Cow position:
               chr16:14627853-14627564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr16:14627012-14626729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               71, 51
               

               Conread position:
               657-945
               

               Cow position:
               chr16:14627096-14626808 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               226, 235
               

               Conread position:
               657-946
               

               Cow position:
               chr16:14627432-14627143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               71, 60
               

               Conread position:
               659-940
               

               Cow position:
               chr16:14627682-14627401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               661-936
               

               Cow position:
               chr16:14627764-14627489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               55, 73
               

               Conread position:
               661-937
               

               Cow position:
               chr16:14627260-14626984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               194
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               676-937
               

               Cow position:
               chr16:14627917-14627656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               213, 206
               

               Conread position:
               709-946
               

               Cow position:
               chr16:14627968-14627731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               743-936
               

               Cow position:
               chr16:14627514-14627321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               226-645
               

               Cow position:
               chr17:22472297-22472710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               72, 63
               

               Conread position:
               650-939
               

               Cow position:
               chr17:22473231-22473517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               657-927
               

               Cow position:
               chr17:22451976-22451706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr17:22551943-22551664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr17:22499326-22499045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr17:22552195-22551914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 81
               

               Conread position:
               657-938
               

               Cow position:
               chr17:22552279-22551998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-938
               

               Cow position:
               chr17:22552447-22552166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               90, 74
               

               Conread position:
               657-938
               

               Cow position:
               chr17:22552867-22552586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               77, 81
               

               Conread position:
               657-938
               

               Cow position:
               chr17:22553035-22552754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               657-938
               

               Cow position:
               chr17:22589865-22589584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               145, 151
               

               Conread position:
               657-939
               

               Cow position:
               chr17:22452144-22451862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               201
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               57, 50
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22473319-22473602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               195
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22473571-22473854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22499074-22498791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22551775-22551492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22551859-22551576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22552027-22551744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22589697-22589414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr17:22589949-22589666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-942
               

               Cow position:
               chr17:22473655-22473940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-38
               

               Alignm gaps (pig, cow):
               269, 283
               

               Conread position:
               657-945
               

               Cow position:
               chr17:22499158-22498870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr17:22452312-22452023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.00001e-41
               

               Alignm gaps (pig, cow):
               66, 47
               

               Conread position:
               657-948
               

               Cow position:
               chr17:22498822-22498531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               203
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               73, 58
               

               Conread position:
               658-940
               

               Cow position:
               chr17:22589612-22589330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               222, 234
               

               Conread position:
               658-945
               

               Cow position:
               chr17:22473488-22473775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-936
               

               Cow position:
               chr17:22590283-22590006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               232, 224
               

               Conread position:
               659-938
               

               Cow position:
               chr17:22552697-22552418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               79, 74
               

               Conread position:
               659-940
               

               Cow position:
               chr17:22473405-22473686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-940
               

               Cow position:
               chr17:22553117-22552836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               142, 148
               

               Conread position:
               659-940
               

               Cow position:
               chr17:22590199-22589918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               178
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-945
               

               Cow position:
               chr17:22452058-22451772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               661-939
               

               Cow position:
               chr17:22552527-22552249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               161, 156
               

               Conread position:
               664-940
               

               Cow position:
               chr17:22452389-22452113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               219, 239
               

               Conread position:
               670-936
               

               Cow position:
               chr17:22498977-22498711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-933
               

               Cow position:
               chr17:22589515-22589253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-940
               

               Cow position:
               chr17:22499228-22498959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-940
               

               Cow position:
               chr17:22552097-22551828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               130, 136
               

               Conread position:
               671-940
               

               Cow position:
               chr17:22552349-22552080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               67, 62
               

               Conread position:
               671-940
               

               Cow position:
               chr17:22552769-22552500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-940
               

               Cow position:
               chr17:22589767-22589498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               671-940
               

               Cow position:
               chr17:22590019-22589750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               677-938
               

               Cow position:
               chr17:22552595-22552334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               684-945
               

               Cow position:
               chr17:22498879-22498618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               124, 115
               

               Conread position:
               704-940
               

               Cow position:
               chr17:22590070-22589834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               156
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               739-940
               

               Cow position:
               chr17:22452397-22452197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               743-939
               

               Cow position:
               chr17:22499324-22499128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               744-946
               

               Cow position:
               chr17:22499409-22499205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               745-945
               

               Cow position:
               chr17:22473242-22473439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-35
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               614-940
               

               Cow position:
               chr18:44184942-44184617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               208, 19
               

               Conread position:
               620-938
               

               Cow position:
               chr18:56128073-56128388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               623-940
               

               Cow position:
               chr18:44398064-44397750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               217
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               9, 17
               

               Conread position:
               636-938
               

               Cow position:
               chr18:42827369-42827671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               23, 10
               

               Conread position:
               637-936
               

               Cow position:
               chr18:40075157-40075456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               258, 248
               

               Conread position:
               637-940
               

               Cow position:
               chr18:52427599-52427902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               158, 167
               

               Conread position:
               637-940
               

               Cow position:
               chr18:52432948-52433251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               158, 167
               

               Conread position:
               638-945
               

               Cow position:
               chr18:44398304-44397997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 79
               

               Conread position:
               646-861
               

               Cow position:
               chr18:40085877-40085661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 69
               

               Conread position:
               646-940
               

               Cow position:
               chr18:40086628-40086329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               82, 28
               

               Conread position:
               646-945
               

               Cow position:
               chr18:42744238-42743939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               201
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               154, 158
               

               Conread position:
               646-946
               

               Cow position:
               chr18:40086287-40085993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               646-946
               

               Cow position:
               chr18:41949205-41948905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               154, 161
               

               Conread position:
               646-946
               

               Cow position:
               chr18:44154140-44153847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               154, 158
               

               Conread position:
               648-929
               

               Cow position:
               chr18:50246558-50246839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 75
               

               Conread position:
               648-948
               

               Cow position:
               chr18:44184405-44184105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               650-945
               

               Cow position:
               chr18:42675342-42675047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               206
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               150, 154
               

               Conread position:
               651-939
               

               Cow position:
               chr18:56316030-56316317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               654-927
               

               Cow position:
               chr18:55008625-55008899 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               17, 253
               

               Conread position:
               655-939
               

               Cow position:
               chr18:56247829-56247545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 16
               

               Conread position:
               656-857
               

               Cow position:
               chr18:56247248-56247051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               656-932
               

               Cow position:
               chr18:41198484-41198760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               74, 53
               

               Conread position:
               656-933
               

               Cow position:
               chr18:51368281-51368004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               656-937
               

               Cow position:
               chr18:43093601-43093320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               93, 61
               

               Conread position:
               656-937
               

               Cow position:
               chr18:43167945-43168226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               22, 12
               

               Conread position:
               656-937
               

               Cow position:
               chr18:51839156-51838875 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-938
               

               Cow position:
               chr18:41197812-41198094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               69, 61
               

               Conread position:
               656-938
               

               Cow position:
               chr18:43093265-43092983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               71, 61
               

               Conread position:
               656-938
               

               Cow position:
               chr18:53636059-53635777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               656-939
               

               Cow position:
               chr18:14453135-14452852 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               227, 235
               

               Conread position:
               656-939
               

               Cow position:
               chr18:50059722-50059439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               144, 151
               

               Conread position:
               656-939
               

               Cow position:
               chr18:54967103-54967387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               187
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               15, 62
               

               Conread position:
               656-939
               

               Cow position:
               chr18:54967272-54967555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 58
               

               Conread position:
               656-940
               

               Cow position:
               chr18:1417819-1418103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               74, 61
               

               Conread position:
               656-940
               

               Cow position:
               chr18:44184313-44184029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               152, 144
               

               Conread position:
               656-940
               

               Cow position:
               chr18:55066705-55066421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               229, 242
               

               Conread position:
               656-945
               

               Cow position:
               chr18:41197560-41197849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 148
               

               Conread position:
               656-945
               

               Cow position:
               chr18:41197896-41198185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               67, 53
               

               Conread position:
               656-945
               

               Cow position:
               chr18:41198400-41198689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               80, 61
               

               Conread position:
               656-945
               

               Cow position:
               chr18:51368197-51367908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               143, 149
               

               Conread position:
               656-946
               

               Cow position:
               chr18:44153963-44153679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               657-838
               

               Cow position:
               chr18:42674579-42674398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               73, 47
               

               Conread position:
               657-840
               

               Cow position:
               chr18:42837278-42837095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               184
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-858
               

               Cow position:
               chr18:43093924-43093723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               657-858
               

               Cow position:
               chr18:43174698-43174497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               159, 147
               

               Conread position:
               657-873
               

               Cow position:
               chr18:52448186-52448403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               103, 148
               

               Conread position:
               657-874
               

               Cow position:
               chr18:44253162-44252946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               657-878
               

               Cow position:
               chr18:50295426-50295647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               81, 60
               

               Conread position:
               657-878
               

               Cow position:
               chr18:51367944-51367724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               657-881
               

               Cow position:
               chr18:42791286-42791510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               657-898
               

               Cow position:
               chr18:50084024-50084265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 51
               

               Conread position:
               657-899
               

               Cow position:
               chr18:44240583-44240825 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-899
               

               Cow position:
               chr18:51874462-51874704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-923
               

               Cow position:
               chr18:42984734-42984468 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-923
               

               Cow position:
               chr18:56248171-56247907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               56, 10
               

               Conread position:
               657-927
               

               Cow position:
               chr18:44397781-44397511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-928
               

               Cow position:
               chr18:51765172-51764901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-929
               

               Cow position:
               chr18:40075009-40075281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-929
               

               Cow position:
               chr18:43022245-43021973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-929
               

               Cow position:
               chr18:54993226-54993498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               143, 152
               

               Conread position:
               657-929
               

               Cow position:
               chr18:55008965-55009237 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-930
               

               Cow position:
               chr18:51367525-51367252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               138, 149
               

               Conread position:
               657-931
               

               Cow position:
               chr18:42744059-42743785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               657-931
               

               Cow position:
               chr18:42827642-42827915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               66, 50
               

               Conread position:
               657-932
               

               Cow position:
               chr18:50058713-50058440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               657-933
               

               Cow position:
               chr18:51874210-51874486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               83, 91
               

               Conread position:
               657-933
               

               Cow position:
               chr18:51874378-51874654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-933
               

               Cow position:
               chr18:53498630-53498907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               198, 257
               

               Conread position:
               657-933
               

               Cow position:
               chr18:54967189-54967465 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               85, 72
               

               Conread position:
               657-933
               

               Cow position:
               chr18:54979714-54979990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               85, 72
               

               Conread position:
               657-933
               

               Cow position:
               chr18:55008713-55008989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               59, 47
               

               Conread position:
               657-935
               

               Cow position:
               chr18:1418324-1418602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-935
               

               Cow position:
               chr18:14453950-14453672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               140, 145
               

               Conread position:
               657-935
               

               Cow position:
               chr18:33064112-33063834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               79, 74
               

               Conread position:
               657-935
               

               Cow position:
               chr18:33064700-33064422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               657-935
               

               Cow position:
               chr18:40306407-40306685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:41949278-41948999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               218, 229
               

               Conread position:
               657-936
               

               Cow position:
               chr18:42792042-42792321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               65, 58
               

               Conread position:
               657-936
               

               Cow position:
               chr18:42792294-42792573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               178
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:42960061-42959782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               657-936
               

               Cow position:
               chr18:44240331-44240610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               226, 234
               

               Conread position:
               657-936
               

               Cow position:
               chr18:44398117-44397838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:49032472-49032193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               83, 91
               

               Conread position:
               657-936
               

               Cow position:
               chr18:49032892-49032613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:50083856-50084135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               81, 75
               

               Conread position:
               657-936
               

               Cow position:
               chr18:50099129-50099408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               657-936
               

               Cow position:
               chr18:50099213-50099492 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               68, 58
               

               Conread position:
               657-936
               

               Cow position:
               chr18:50099549-50099828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               83, 93
               

               Conread position:
               657-936
               

               Cow position:
               chr18:50271531-50271810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:50848657-50848936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:50848741-50849020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               42, 38
               

               Conread position:
               657-936
               

               Cow position:
               chr18:51368448-51368169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:51789319-51789040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               657-936
               

               Cow position:
               chr18:52428711-52428990 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               219, 239
               

               Conread position:
               657-936
               

               Cow position:
               chr18:52433892-52434171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               219, 239
               

               Conread position:
               657-936
               

               Cow position:
               chr18:53586341-53586062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:55018286-55018565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-936
               

               Cow position:
               chr18:56494082-56494361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-937
               

               Cow position:
               chr18:14454034-14453754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               227, 237
               

               Conread position:
               657-937
               

               Cow position:
               chr18:42744143-42743863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               193
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               66, 58
               

               Conread position:
               657-937
               

               Cow position:
               chr18:42791118-42791398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               657-937
               

               Cow position:
               chr18:42791706-42791986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 58
               

               Conread position:
               657-937
               

               Cow position:
               chr18:42791790-42792070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               85, 60
               

               Conread position:
               657-937
               

               Cow position:
               chr18:42792546-42792826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               657-937
               

               Cow position:
               chr18:42960313-42960033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-937
               

               Cow position:
               chr18:49032640-49032360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               228, 248
               

               Conread position:
               657-937
               

               Cow position:
               chr18:50099297-50099577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               168, 177
               

               Conread position:
               657-937
               

               Cow position:
               chr18:50099633-50099913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               165, 142
               

               Conread position:
               657-937
               

               Cow position:
               chr18:50271783-50272063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               657-937
               

               Cow position:
               chr18:50295258-50295538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               228, 254
               

               Conread position:
               657-937
               

               Cow position:
               chr18:50848489-50848769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               144, 150
               

               Conread position:
               657-938
               

               Cow position:
               chr18:33063944-33063663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr18:42792210-42792491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr18:42827558-42827839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               144, 150
               

               Conread position:
               657-938
               

               Cow position:
               chr18:43168114-43168395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               143, 151
               

               Conread position:
               657-938
               

               Cow position:
               chr18:49032556-49032275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50048901-50048620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               226, 245
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50059385-50059104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50059469-50059188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50083604-50083885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               226, 247
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50083688-50083969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               76, 81
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50083772-50084053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               28, 24
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50083940-50084221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50099045-50099326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               145, 153
               

               Conread position:
               657-938
               

               Cow position:
               chr18:50099885-50100166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr18:55066788-55066507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 59
               

               Conread position:
               657-938
               

               Cow position:
               chr18:55066956-55066675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-938
               

               Cow position:
               chr18:55523798-55524079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               657-938
               

               Cow position:
               chr18:56329361-56329080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               144, 165
               

               Conread position:
               657-939
               

               Cow position:
               chr18:1417988-1418270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               142, 150
               

               Conread position:
               657-939
               

               Cow position:
               chr18:1418072-1418354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               108, 97
               

               Conread position:
               657-939
               

               Cow position:
               chr18:1418240-1418522 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr18:33064616-33064334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               186
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr18:33092784-33092502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr18:33092952-33092670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               81, 76
               

               Conread position:
               657-939
               

               Cow position:
               chr18:40086528-40086246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               657-939
               

               Cow position:
               chr18:42675083-42674801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               657-939
               

               Cow position:
               chr18:42744395-42744113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               143, 147
               

               Conread position:
               657-939
               

               Cow position:
               chr18:42744479-42744197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr18:42837698-42837416 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr18:43175538-43175256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               657-939
               

               Cow position:
               chr18:44239995-44240277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               143, 149
               

               Conread position:
               657-939
               

               Cow position:
               chr18:44240415-44240697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               143, 148
               

               Conread position:
               657-939
               

               Cow position:
               chr18:49032724-49032442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               59, 73
               

               Conread position:
               657-939
               

               Cow position:
               chr18:49033144-49032862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               144, 150
               

               Conread position:
               657-939
               

               Cow position:
               chr18:50030915-50030631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr18:50246399-50246681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               24, 33
               

               Conread position:
               657-939
               

               Cow position:
               chr18:53509476-53509758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               156, 150
               

               Conread position:
               657-939
               

               Cow position:
               chr18:53525930-53526212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               156, 150
               

               Conread position:
               657-939
               

               Cow position:
               chr18:53586929-53586647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               657-939
               

               Cow position:
               chr18:54979546-54979828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               159, 143
               

               Conread position:
               657-939
               

               Cow position:
               chr18:54992974-54993256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-939
               

               Cow position:
               chr18:54993142-54993424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               657-939
               

               Cow position:
               chr18:54993310-54993592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               657-939
               

               Cow position:
               chr18:55008797-55009079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 81
               

               Conread position:
               657-939
               

               Cow position:
               chr18:55018454-55018737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               28, 20
               

               Conread position:
               657-939
               

               Cow position:
               chr18:56316287-56316569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               147, 142
               

               Conread position:
               657-939
               

               Cow position:
               chr18:56329949-56329667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               143, 154
               

               Conread position:
               657-940
               

               Cow position:
               chr18:1418156-1418439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               20, 11
               

               Conread position:
               657-940
               

               Cow position:
               chr18:33063860-33063576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               231, 237
               

               Conread position:
               657-940
               

               Cow position:
               chr18:33064784-33064501 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:40324478-40324195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:41948690-41948407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:41948858-41948575 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               199
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               143, 151
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42674999-42674716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               197
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               230, 216
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42790950-42791233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               70, 58
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42791202-42791485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               142, 150
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42792126-42792409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               144, 156
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42792378-42792661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42959734-42959451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42960145-42959862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               154, 147
               

               Conread position:
               657-940
               

               Cow position:
               chr18:42985070-42984787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               657-940
               

               Cow position:
               chr18:43120253-43119970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:43167778-43168061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               143, 151
               

               Conread position:
               657-940
               

               Cow position:
               chr18:43174950-43174667 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               76, 68
               

               Conread position:
               657-940
               

               Cow position:
               chr18:44184480-44184197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               239, 216
               

               Conread position:
               657-940
               

               Cow position:
               chr18:44239911-44240194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 58
               

               Conread position:
               657-940
               

               Cow position:
               chr18:44253330-44253048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               140, 146
               

               Conread position:
               657-940
               

               Cow position:
               chr18:44253653-44253371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               269, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:49033312-49033029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:50083436-50083719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:50848573-50848856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               144, 151
               

               Conread position:
               657-940
               

               Cow position:
               chr18:51789403-51789120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:51969411-51969692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               657-940
               

               Cow position:
               chr18:51969661-51969935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               137, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:52427955-52428238 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               155, 146
               

               Conread position:
               657-940
               

               Cow position:
               chr18:52428375-52428658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:52433136-52433419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               188
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               137, 147
               

               Conread position:
               657-940
               

               Cow position:
               chr18:52433220-52433503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               37, 42
               

               Conread position:
               657-940
               

               Cow position:
               chr18:52433556-52433839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:52447682-52447965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               657-940
               

               Cow position:
               chr18:53586257-53585974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               228, 234
               

               Conread position:
               657-940
               

               Cow position:
               chr18:54979966-54980249 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-940
               

               Cow position:
               chr18:55018034-55018317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               63, 51
               

               Conread position:
               657-940
               

               Cow position:
               chr18:56247331-56247052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               144, 150
               

               Conread position:
               657-944
               

               Cow position:
               chr18:43048658-43048371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:33064280-33063992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               165, 148
               

               Conread position:
               657-945
               

               Cow position:
               chr18:33093036-33092748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               186
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:40324310-40324022 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               657-945
               

               Cow position:
               chr18:41198233-41198521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 147
               

               Conread position:
               657-945
               

               Cow position:
               chr18:41949110-41948822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42674831-42674543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42675167-42674879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               204
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               143, 147
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42675251-42674963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42837782-42837494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42984818-42984530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               195
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42984902-42984614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42984986-42984698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42985322-42985034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               657-945
               

               Cow position:
               chr18:42985574-42985286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               143, 148
               

               Conread position:
               657-945
               

               Cow position:
               chr18:43022329-43022041 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:43022497-43022209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               57, 47
               

               Conread position:
               657-945
               

               Cow position:
               chr18:43022749-43022461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               657-945
               

               Cow position:
               chr18:43119833-43119545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:43120169-43119881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               201
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               154, 143
               

               Conread position:
               657-945
               

               Cow position:
               chr18:43174866-43174578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               60, 72
               

               Conread position:
               657-945
               

               Cow position:
               chr18:43175454-43175166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:44154468-44154177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               200
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 158
               

               Conread position:
               657-945
               

               Cow position:
               chr18:44239827-44240115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               67, 59
               

               Conread position:
               657-945
               

               Cow position:
               chr18:44240499-44240787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:44397865-44397577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               204
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               67, 60
               

               Conread position:
               657-945
               

               Cow position:
               chr18:51368532-51368244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               657-945
               

               Cow position:
               chr18:51789571-51789283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               134, 150
               

               Conread position:
               657-945
               

               Cow position:
               chr18:51812730-51812442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               249, 241
               

               Conread position:
               657-945
               

               Cow position:
               chr18:51839323-51839035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:52447346-52447634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               28, 14
               

               Conread position:
               657-945
               

               Cow position:
               chr18:52447430-52447718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               657-945
               

               Cow position:
               chr18:52448018-52448307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               143, 149
               

               Conread position:
               657-945
               

               Cow position:
               chr18:53635218-53634931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               184
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               186, 0
               

               Conread position:
               657-945
               

               Cow position:
               chr18:56247413-56247129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:42744647-42744358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:42837614-42837325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-946
               

               Cow position:
               chr18:42985238-42984949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               206
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               70, 60
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43022833-43022544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43022917-43022628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43023085-43022796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43120085-43119796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43168198-43168487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43175202-43174913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43175286-43174997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               193
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               227, 241
               

               Conread position:
               657-946
               

               Cow position:
               chr18:43175697-43175417 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               108, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:44184648-44184359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               156, 147
               

               Conread position:
               657-946
               

               Cow position:
               chr18:44253737-44253448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               143, 148
               

               Conread position:
               657-946
               

               Cow position:
               chr18:49032808-49032519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:51812226-51811937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               183
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:51812562-51812273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               194
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               81, 68
               

               Conread position:
               657-946
               

               Cow position:
               chr18:52427871-52428160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               37, 42
               

               Conread position:
               657-946
               

               Cow position:
               chr18:52428123-52428412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:52433304-52433593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-946
               

               Cow position:
               chr18:52447934-52448223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               199
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-947
               

               Cow position:
               chr18:43093348-43093058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               211
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 154
               

               Conread position:
               657-948
               

               Cow position:
               chr18:41197729-41198020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 150
               

               Conread position:
               657-948
               

               Cow position:
               chr18:41198317-41198608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               208
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               143, 147
               

               Conread position:
               657-948
               

               Cow position:
               chr18:42674915-42674624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               657-948
               

               Cow position:
               chr18:43048574-43048286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               139, 147
               

               Conread position:
               658-879
               

               Cow position:
               chr18:40306744-40306965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               64, 57
               

               Conread position:
               658-879
               

               Cow position:
               chr18:51812141-51811920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               147
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-931
               

               Cow position:
               chr18:50059636-50059363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               658-931
               

               Cow position:
               chr18:51752264-51751991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               80, 75
               

               Conread position:
               658-933
               

               Cow position:
               chr18:33064195-33063920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               163, 157
               

               Conread position:
               658-933
               

               Cow position:
               chr18:51969496-51969769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               658-934
               

               Cow position:
               chr18:40324225-40323949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               658-936
               

               Cow position:
               chr18:51400771-51401049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               142, 146
               

               Conread position:
               658-936
               

               Cow position:
               chr18:51765759-51765481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               69, 59
               

               Conread position:
               658-937
               

               Cow position:
               chr18:41198150-41198429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               141, 146
               

               Conread position:
               658-937
               

               Cow position:
               chr18:54980135-54980414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               80, 67
               

               Conread position:
               658-938
               

               Cow position:
               chr18:41198066-41198346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               64, 56
               

               Conread position:
               658-939
               

               Cow position:
               chr18:40306576-40306857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-939
               

               Cow position:
               chr18:40306912-40307193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               80, 57
               

               Conread position:
               658-939
               

               Cow position:
               chr18:50059048-50058767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               80, 67
               

               Conread position:
               658-939
               

               Cow position:
               chr18:53560081-53560362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-939
               

               Cow position:
               chr18:54979631-54979912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 58
               

               Conread position:
               658-939
               

               Cow position:
               chr18:55018203-55018484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               229, 218
               

               Conread position:
               658-940
               

               Cow position:
               chr18:40075346-40075628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               225, 230
               

               Conread position:
               658-940
               

               Cow position:
               chr18:42744310-42744028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               199
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               658-940
               

               Cow position:
               chr18:42744562-42744280 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-940
               

               Cow position:
               chr18:43093095-43092814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               142, 149
               

               Conread position:
               658-940
               

               Cow position:
               chr18:50058964-50058682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-940
               

               Cow position:
               chr18:52427704-52427986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               658-945
               

               Cow position:
               chr18:41197982-41198269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               63, 56
               

               Conread position:
               658-945
               

               Cow position:
               chr18:42837529-42837242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               658-945
               

               Cow position:
               chr18:42985489-42985202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               69, 58
               

               Conread position:
               658-945
               

               Cow position:
               chr18:43048741-43048454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               201
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-945
               

               Cow position:
               chr18:44398200-44397913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               212
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 59
               

               Conread position:
               658-945
               

               Cow position:
               chr18:51368363-51368076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               182
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-945
               

               Cow position:
               chr18:51765591-51765304 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               135, 145
               

               Conread position:
               658-945
               

               Cow position:
               chr18:51765927-51765640 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               187
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               49, 65
               

               Conread position:
               658-945
               

               Cow position:
               chr18:52446927-52447214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               54, 65
               

               Conread position:
               658-946
               

               Cow position:
               chr18:43175033-43174745 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               159, 152
               

               Conread position:
               658-946
               

               Cow position:
               chr18:52433053-52433341 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               36, 41
               

               Conread position:
               658-948
               

               Cow position:
               chr18:40324561-40324271 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               58, 65
               

               Conread position:
               659-879
               

               Cow position:
               chr18:43119747-43119527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               659-929
               

               Cow position:
               chr18:40086948-40086679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               212, 174
               

               Conread position:
               659-929
               

               Cow position:
               chr18:51788897-51788626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               224, 242
               

               Conread position:
               659-930
               

               Cow position:
               chr18:53509730-53509999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               252, 0
               

               Conread position:
               659-932
               

               Cow position:
               chr18:44184226-44183953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-935
               

               Cow position:
               chr18:41948604-41948328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-936
               

               Cow position:
               chr18:51751927-51751650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               141, 145
               

               Conread position:
               659-936
               

               Cow position:
               chr18:51752095-51751818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               659-936
               

               Cow position:
               chr18:51752179-51751902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               138, 145
               

               Conread position:
               659-936
               

               Cow position:
               chr18:51839237-51838960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 72
               

               Conread position:
               659-936
               

               Cow position:
               chr18:53498465-53498741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               232, 78
               

               Conread position:
               659-937
               

               Cow position:
               chr18:42674745-42674467 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               659-938
               

               Cow position:
               chr18:14453216-14452937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               141, 145
               

               Conread position:
               659-938
               

               Cow position:
               chr18:50058879-50058600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-939
               

               Cow position:
               chr18:33064866-33064586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               153, 146
               

               Conread position:
               659-939
               

               Cow position:
               chr18:42674661-42674383 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               198
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               155, 139
               

               Conread position:
               659-939
               

               Cow position:
               chr18:42792632-42792912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-939
               

               Cow position:
               chr18:44154379-44154099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               193
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               76, 69
               

               Conread position:
               659-939
               

               Cow position:
               chr18:44239745-44240025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 57
               

               Conread position:
               659-939
               

               Cow position:
               chr18:44240081-44240361 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               65, 57
               

               Conread position:
               659-940
               

               Cow position:
               chr18:40324392-40324111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               142, 151
               

               Conread position:
               659-940
               

               Cow position:
               chr18:41948772-41948491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               197
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               68, 57
               

               Conread position:
               659-940
               

               Cow position:
               chr18:41949024-41948743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               141, 148
               

               Conread position:
               659-940
               

               Cow position:
               chr18:42985152-42984871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               68, 55
               

               Conread position:
               659-940
               

               Cow position:
               chr18:43174780-43174499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               189
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               64, 45
               

               Conread position:
               659-940
               

               Cow position:
               chr18:43175116-43174835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-940
               

               Cow position:
               chr18:44154211-44153931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               659-940
               

               Cow position:
               chr18:44398367-44398086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               141, 149
               

               Conread position:
               659-940
               

               Cow position:
               chr18:51812644-51812363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-940
               

               Cow position:
               chr18:56316205-56316486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               232, 216
               

               Conread position:
               659-943
               

               Cow position:
               chr18:51751843-51751558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               268, 0
               

               Conread position:
               659-945
               

               Cow position:
               chr18:33064362-33064076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               198
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-945
               

               Cow position:
               chr18:43022411-43022125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               196
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               148, 141
               

               Conread position:
               659-945
               

               Cow position:
               chr18:43119999-43119713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               79, 75
               

               Conread position:
               659-945
               

               Cow position:
               chr18:44184562-44184276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               70, 59
               

               Conread position:
               659-945
               

               Cow position:
               chr18:44240165-44240451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               659-945
               

               Cow position:
               chr18:44397947-44397661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-945
               

               Cow position:
               chr18:51400604-51400890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 75
               

               Conread position:
               659-945
               

               Cow position:
               chr18:51789485-51789199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               197
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               54, 67
               

               Conread position:
               659-946
               

               Cow position:
               chr18:41949360-41949073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               223, 229
               

               Conread position:
               659-946
               

               Cow position:
               chr18:42837444-42837157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               141, 145
               

               Conread position:
               659-946
               

               Cow position:
               chr18:42837864-42837577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               204
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-948
               

               Cow position:
               chr18:40085948-40085658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               152, 140
               

               Conread position:
               659-948
               

               Cow position:
               chr18:40324644-40324355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-948
               

               Cow position:
               chr18:43093430-43093141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-881
               

               Cow position:
               chr18:51839068-51838847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               156
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               131, 146
               

               Conread position:
               660-931
               

               Cow position:
               chr18:52428630-52428901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-931
               

               Cow position:
               chr18:52433811-52434082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-936
               

               Cow position:
               chr18:56316122-56316398 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               51, 44
               

               Conread position:
               660-938
               

               Cow position:
               chr18:43022998-43022720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               196
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               660-938
               

               Cow position:
               chr18:50246486-50246764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               660-939
               

               Cow position:
               chr18:41948939-41948660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               67, 56
               

               Conread position:
               660-939
               

               Cow position:
               chr18:56247740-56247464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               187
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               233, 0
               

               Conread position:
               660-940
               

               Cow position:
               chr18:42791961-42792241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               188
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-940
               

               Cow position:
               chr18:44253818-44253538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               189
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-940
               

               Cow position:
               chr18:52428042-52428322 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               660-940
               

               Cow position:
               chr18:52428210-52428490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               152, 141
               

               Conread position:
               660-940
               

               Cow position:
               chr18:52428294-52428574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               68, 62
               

               Conread position:
               660-940
               

               Cow position:
               chr18:52428546-52428826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               660-940
               

               Cow position:
               chr18:52433391-52433671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               152, 146
               
660-940UCSC Genome Browser
               Conread position:
               
               

               Cow position:
               chr18:52433475-52433755 (view  custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               68, 62
               
660-940UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chr18:52433727-52434007 (view  custom track)

               
               
               
Alignm length: 281

               
               
               
Alignm identity: 189

               
               
               
Alignm E-value: 9e-37

               
               
               
Alignm gaps (pig, cow): 0, 0
660-940UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chr18:52447853-52448133 (view  custom track)

               
               
               
Alignm length: 282

               
               
               
Alignm identity: 194

               
               
               
Alignm E-value: 4e-39

               
               
               
Alignm gaps (pig, cow): 140, 144

               
               
               Conread position:660-945
               
               
               Cow position:chr18:43167865-43168150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:176
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:660-945
               
               
               Cow position:chr18:52447601-52447886 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:660-946
               
               
               Cow position:chr18:52428462-52428748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:660-946
               
               
               Cow position:chr18:52433643-52433929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:660-948
               
               
               Cow position:chr18:43094088-43093801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:196
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):140, 57

               
               
               Conread position:661-879
               
               
               Cow position:chr18:42959646-42959428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:153
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-880
               
               
               Cow position:chr18:50246067-50246286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):141, 149

               
               
               Conread position:661-938
               
               
               Cow position:chr18:42675415-42675138 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-938
               
               
               Cow position:chr18:50048645-50048368 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):86, 56

               
               
               Conread position:661-940
               
               
               Cow position:chr18:40324726-40324447 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):69, 56

               
               
               Conread position:661-940
               
               
               Cow position:chr18:42791878-42792157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-940
               
               
               Cow position:chr18:43094004-43093725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):238, 245

               
               
               Conread position:661-940
               
               
               Cow position:chr18:44154293-44154014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):67, 56

               
               
               Conread position:661-945
               
               
               Cow position:chr18:41197649-41197933 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-945
               
               
               Cow position:chr18:44184728-44184444 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-945
               
               
               Cow position:chr18:51812894-51812610 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:664-933
               
               
               Cow position:chr18:51874301-51874570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:171
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:664-936
               
               
               Cow position:chr18:50099472-50099744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):221, 232

               
               
               Conread position:664-937
               
               
               Cow position:chr18:43093173-43092900 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:193
               
               
               Alignm E-value:6.02558e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:664-937
               
               
               Cow position:chr18:51969334-51969607 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):60, 53

               
               
               Conread position:664-939
               
               
               Cow position:chr18:40306330-40306605 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:664-939
               
               
               Cow position:chr18:42791041-42791316 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:189
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):74, 45

               
               
               Conread position:664-939
               
               
               Cow position:chr18:43022574-43022299 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):220, 228

               
               
               Conread position:664-939
               
               
               Cow position:chr18:44240254-44240529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):63, 52

               
               
               Conread position:664-940
               
               
               Cow position:chr18:14453859-14453583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):50, 64

               
               
               Conread position:664-945
               
               
               Cow position:chr18:14453295-14453014 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:206
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:664-945
               
               
               Cow position:chr18:42960222-42959941 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:664-945
               
               
               Cow position:chr18:42985399-42985118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):68, 51

               
               
               Conread position:664-945
               
               
               Cow position:chr18:51765249-51764968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:178
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:665-936
               
               
               Cow position:chr18:51368020-51367750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:175
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):211, 0

               
               
               Conread position:665-937
               
               
               Cow position:chr18:43093508-43093236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):135, 142

               
               
               Conread position:665-938
               
               
               Cow position:chr18:40306835-40307108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):147, 134

               
               
               Conread position:665-940
               
               
               Cow position:chr18:52427795-52428070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):129, 138

               
               
               Conread position:665-946
               
               
               Cow position:chr18:52447522-52447803 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):51, 58

               
               
               Conread position:665-946
               
               
               Cow position:chr18:52447774-52448055 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):51, 58

               
               
               Conread position:666-945
               
               
               Cow position:chr18:43022656-43022377 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):139, 134

               
               
               Conread position:667-945
               
               
               Cow position:chr18:42675493-42675215 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-879
               
               
               Cow position:chr18:56494263-56494472 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:137
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-935
               
               
               Cow position:chr18:33064015-33063750 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:186
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):230, 223

               
               
               Conread position:670-935
               
               
               Cow position:chr18:40306252-40306517 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-936
               
               
               Cow position:chr18:50848838-50849104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:174
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):128, 137

               
               
               Conread position:670-936
               
               
               Cow position:chr18:56316468-56316734 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:172
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):29, 25

               
               
               Conread position:670-936
               
               
               Cow position:chr18:56330020-56329754 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):54, 47

               
               
               Conread position:670-937
               
               
               Cow position:chr18:33064939-33064672 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:172
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-937
               
               
               Cow position:chr18:55523559-55523826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):42, 59

               
               
               Conread position:670-937
               
               
               Cow position:chr18:56128792-56129059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-938
               
               
               Cow position:chr18:55523643-55523911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:170
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):45, 55

               
               
               Conread position:670-938
               
               
               Cow position:chr18:56329684-56329416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-939
               
               
               Cow position:chr18:33064435-33064166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):152, 131

               
               
               Conread position:670-939
               
               
               Cow position:chr18:53610048-53609779 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:167
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-939
               
               
               Cow position:chr18:53635373-53635104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-939
               
               
               Cow position:chr18:54992735-54993004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):15, 7

               
               
               Conread position:670-939
               
               
               Cow position:chr18:54993407-54993676 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:168
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-939
               
               
               Cow position:chr18:55018383-55018652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:170
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-939
               
               
               Cow position:chr18:56329264-56328995 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):54, 47

               
               
               Conread position:670-940
               
               
               Cow position:chr18:51838372-51838108 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):215, 130

               
               
               Conread position:670-940
               
               
               Cow position:chr18:56128708-56128978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-945
               
               
               Cow position:chr18:42744718-42744443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:193
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-945
               
               
               Cow position:chr18:42837937-42837662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-946
               
               
               Cow position:chr18:33064519-33064243 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):230, 216

               
               
               Conread position:670-946
               
               
               Cow position:chr18:43093671-43093395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:196
               
               
               Alignm E-value:5.99756e-43
               
               
               Alignm gaps (pig, cow):130, 141

               
               
               Conread position:670-946
               
               
               Cow position:chr18:56247481-56247210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):130, 19

               
               
               Conread position:671-880
               
               
               Cow position:chr18:50049055-50048846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:145
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):69, 77

               
               
               Conread position:671-931
               
               
               Cow position:chr18:51751999-51751739 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-933
               
               
               Cow position:chr18:52012191-52011929 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:167
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):212, 223

               
               
               Conread position:671-936
               
               
               Cow position:chr18:50281758-50282023 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:169
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-936
               
               
               Cow position:chr18:51400700-51400965 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):67, 44

               
               
               Conread position:671-936
               
               
               Cow position:chr18:51812380-51812115 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):118, 132

               
               
               Conread position:671-936
               
               
               Cow position:chr18:56330103-56329838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:165
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-937
               
               
               Cow position:chr18:43168044-43168310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):128, 137

               
               
               Conread position:671-937
               
               
               Cow position:chr18:49032962-49032696 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-937
               
               
               Cow position:chr18:50059287-50059021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):151, 137

               
               
               Conread position:671-937
               
               
               Cow position:chr18:50245993-50246259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):222, 211

               
               
               Conread position:671-938
               
               
               Cow position:chr18:42792476-42792743 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:179
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):129, 136

               
               
               Conread position:671-938
               
               
               Cow position:chr18:50048803-50048536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):129, 140

               
               
               Conread position:671-938
               
               
               Cow position:chr18:50849091-50849358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:171
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-939
               
               
               Cow position:chr18:49033046-49032778 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-939
               
               
               Cow position:chr18:53635960-53635692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-939
               
               
               Cow position:chr18:56329179-56328911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-939
               
               
               Cow position:chr18:56329431-56329163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):45, 53

               
               
               Conread position:671-939
               
               
               Cow position:chr18:56329515-56329247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):45, 52

               
               
               Conread position:671-940
               
               
               Cow position:chr18:40306673-40306942 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:185
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):61, 54

               
               
               Conread position:671-940
               
               
               Cow position:chr18:50295356-50295625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):147, 134

               
               
               Conread position:671-940
               
               
               Cow position:chr18:53509322-53509591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):129, 136

               
               
               Conread position:671-940
               
               
               Cow position:chr18:53525776-53526045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):136, 129

               
               
               Conread position:671-940
               
               
               Cow position:chr18:53635456-53635187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):62, 67

               
               
               Conread position:671-945
               
               
               Cow position:chr18:51789137-51788863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:174
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):118, 132

               
               
               Conread position:671-946
               
               
               Cow position:chr18:51788969-51788694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:178
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):203, 217

               
               
               Conread position:671-948
               
               
               Cow position:chr18:49032374-49032097 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:181
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):45, 52

               
               
               Conread position:672-933
               
               
               Cow position:chr18:51400869-51401130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):127, 133

               
               
               Conread position:672-936
               
               
               Cow position:chr18:51400365-51400629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:169
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):133, 128

               
               
               Conread position:672-936
               
               
               Cow position:chr18:51400533-51400797 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:672-940
               
               
               Cow position:chr18:50271714-50271982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):129, 141

               
               
               Conread position:673-937
               
               
               Cow position:chr18:50271463-50271727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):140, 135

               
               
               Conread position:673-938
               
               
               Cow position:chr18:50021723-50021458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):131, 126

               
               
               Conread position:673-939
               
               
               Cow position:chr18:56330185-56329919 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:168
               
               
               Alignm E-value:5e-21
               
               
               Alignm gaps (pig, cow):43, 56

               
               
               Conread position:673-940
               
               
               Cow position:chr18:40324882-40324615 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:191
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:673-940
               
               
               Cow position:chr18:43053457-43053190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):50, 43

               
               
               Conread position:673-940
               
               
               Cow position:chr18:50058781-50058514 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):215, 209

               
               
               Conread position:673-945
               
               
               Cow position:chr18:51812966-51812694 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:676-933
               
               
               Cow position:chr18:52447029-52447286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:168
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):119, 128

               
               
               Conread position:676-936
               
               
               Cow position:chr18:49033377-49033117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:169
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):14, 6

               
               
               Conread position:676-940
               
               
               Cow position:chr18:44398434-44398170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:190
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:676-945
               
               
               Cow position:chr18:43175351-43175082 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):31, 47

               
               
               Conread position:677-924
               
               
               Cow position:chr18:56329089-56328842 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:164
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):34, 27

               
               
               Conread position:677-939
               
               
               Cow position:chr18:40306175-40306437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:171
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):63, 71

               
               
               Conread position:678-936
               
               
               Cow position:chr18:51789635-51789376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):7, 38

               
               
               Conread position:678-945
               
               
               Cow position:chr18:51812794-51812526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):7, 38

               
               
               Conread position:684-926
               
               
               Cow position:chr18:40307106-40307348 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:161
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):40, 33

               
               
               Conread position:684-929
               
               
               Cow position:chr18:54979909-54980154 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):203, 192

               
               
               Conread position:684-937
               
               
               Cow position:chr18:50295201-50295454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:167
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):196, 220

               
               
               Conread position:684-937
               
               
               Cow position:chr18:53509671-53509924 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:162
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:684-937
               
               
               Cow position:chr18:53586398-53586145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:684-937
               
               
               Cow position:chr18:54967717-54967970 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):54, 24

               
               
               Conread position:684-938
               
               
               Cow position:chr18:53586482-53586228 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:255
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:684-939
               
               
               Cow position:chr18:40075288-40075543 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:168
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):201, 218

               
               
               Conread position:684-939
               
               
               Cow position:chr18:55017977-55018232 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:174
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):52, 33

               
               
               Conread position:684-940
               
               
               Cow position:chr18:55017809-55018065 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):33, 46

               
               
               Conread position:684-940
               
               
               Cow position:chr18:56248225-56247974 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:183
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):116, 49

               
               
               Conread position:685-945
               
               
               Cow position:chr18:44253877-44253617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):53, 49

               
               
               Conread position:686-940
               
               
               Cow position:chr18:40307024-40307278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:167
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):115, 122

               
               
               Conread position:687-879
               
               
               Cow position:chr18:43175592-43175400 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):112, 120

               
               
               Conread position:687-936
               
               
               Cow position:chr18:56128053-56128302 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:161
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:687-940
               
               
               Cow position:chr18:53636112-53635859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:688-937
               
               
               Cow position:chr18:33093089-33092840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):50, 40

               
               
               Conread position:688-938
               
               
               Cow position:chr18:50246346-50246596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):124, 117

               
               
               Conread position:688-938
               
               
               Cow position:chr18:50848352-50848602 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:167
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):49, 27

               
               
               Conread position:688-939
               
               
               Cow position:chr18:53586982-53586731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:166
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):195, 207

               
               
               Conread position:689-933
               
               
               Cow position:chr18:50271899-50272143 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:159
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):34, 19

               
               
               Conread position:689-937
               
               
               Cow position:chr18:55067092-55066844 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):194, 206

               
               
               Conread position:689-939
               
               
               Cow position:chr18:53509256-53509506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:689-939
               
               
               Cow position:chr18:53525710-53525960 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:162
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:689-939
               
               
               Cow position:chr18:56329833-56329583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:164
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):27, 39

               
               
               Conread position:689-940
               
               
               Cow position:chr18:1417936-1418187 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):49, 36

               
               
               Conread position:689-945
               
               
               Cow position:chr18:51789791-51789535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:258
               
               
               Alignm identity:165
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):100, 114

               
               
               Conread position:689-946
               
               
               Cow position:chr18:41197509-41197766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):49, 44

               
               
               Conread position:696-936
               
               
               Cow position:chr18:40075132-40075372 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):189, 199

               
               
               Conread position:703-939
               
               
               Cow position:chr18:44398491-44398255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:238
               
               
               Alignm identity:164
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):71, 54

               
               
               Conread position:704-930
               
               
               Cow position:chr18:40075476-40075702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:227
               
               
               Alignm identity:150
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:704-933
               
               
               Cow position:chr18:55523509-55523738 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:231
               
               
               Alignm identity:153
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):191, 178

               
               
               Conread position:704-936
               
               
               Cow position:chr18:53610182-53609950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:150
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:704-937
               
               
               Cow position:chr18:42791585-42791818 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):44, 31

               
               
               Conread position:704-939
               
               
               Cow position:chr18:55523341-55523576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:236
               
               
               Alignm identity:153
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:717-940
               
               
               Cow position:chr18:42985596-42985375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):9, 0

               
               
               Conread position:724-948
               
               
               Cow position:chr18:51969803-51970027 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:158
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):84, 75

               
               
               Conread position:727-940
               
               
               Cow position:chr18:44154482-44154266 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:148
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):101, 0

               
               
               Conread position:727-946
               
               
               Cow position:chr18:42837964-42837745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:220
               
               
               Alignm identity:144
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:727-946
               
               
               Cow position:chr18:52447332-52447551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:154
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):33, 27

               
               
               Conread position:727-947
               
               
               Cow position:chr18:44239729-44239949 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:151
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):78, 73

               
               
               Conread position:728-940
               
               
               Cow position:chr18:53586522-53586310 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:728-945
               
               
               Cow position:chr18:42959747-42959530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):10, 6

               
               
               Conread position:728-945
               
               
               Cow position:chr18:43093694-43093480 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:149
               
               
               Alignm E-value:9e-27
               
               
               Alignm gaps (pig, cow):20, 0

               
               
               Conread position:728-945
               
               
               Cow position:chr18:51789668-51789451 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:146
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:729-939
               
               
               Cow position:chr18:40306563-40306773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:143
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:734-945
               
               
               Cow position:chr18:43053480-43053269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:139
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:735-945
               
               
               Cow position:chr18:40086956-40086747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:142
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):181, 0

               
               
               Conread position:736-939
               
               
               Cow position:chr18:53635475-53635272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:136
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:737-936
               
               
               Cow position:chr18:53610065-53609866 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:200
               
               
               Alignm identity:133
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:737-945
               
               
               Cow position:chr18:44253334-44253126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-22
               
               
               Alignm gaps (pig, cow):169, 164

               
               
               Conread position:740-940
               
               
               Cow position:chr18:42827389-42827589 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:201
               
               
               Alignm identity:138
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:743-937
               
               
               Cow position:chr18:54993564-54993758 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:134
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):78, 64

               
               
               Conread position:743-940
               
               
               Cow position:chr18:51765926-51765729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:142
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):48, 60

               
               
               Conread position:743-945
               
               
               Cow position:chr18:51367607-51367405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:139
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:743-945
               
               
               Cow position:chr18:51752263-51752061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:134
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:745-946
               
               
               Cow position:chr18:42744727-42744526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):55, 62

               
               
               Conread position:747-948
               
               
               Cow position:chr18:44253899-44253698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:136
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:748-940
               
               
               Cow position:chr18:51969334-51969526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:193
               
               
               Alignm identity:133
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:343-480
               
               
               Cow position:chr19:20638207-20638071 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:138
               
               
               Alignm identity:106
               
               
               Alignm E-value:8e-25
               
               
               Alignm gaps (pig, cow):130, 0

               
               
               Conread position:656-939
               
               
               Cow position:chr19:14940729-14941012 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:194
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-847
               
               
               Cow position:chr19:23614930-23615118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:191
               
               
               Alignm identity:131
               
               
               Alignm E-value:6e-23
               
               
               Alignm gaps (pig, cow):182, 0

               
               
               Conread position:657-933
               
               
               Cow position:chr19:14948313-14948037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:178
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):226, 231

               
               
               Conread position:657-933
               
               
               Cow position:chr19:14948397-14948121 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-935
               
               
               Cow position:chr19:23613670-23613948 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:192
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-936
               
               
               Cow position:chr19:14940394-14940673 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):58, 66

               
               
               Conread position:657-936
               
               
               Cow position:chr19:23597351-23597630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):59, 67

               
               
               Conread position:657-936
               
               
               Cow position:chr19:23614594-23614873 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):143, 152

               
               
               Conread position:657-936
               
               
               Cow position:chr19:23649960-23650239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):67, 60

               
               
               Conread position:657-937
               
               
               Cow position:chr19:20635227-20634950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):245, 0

               
               
               Conread position:657-937
               
               
               Cow position:chr19:23649708-23649988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):79, 60

               
               
               Conread position:657-938
               
               
               Cow position:chr19:23650128-23650409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):67, 59

               
               
               Conread position:657-939
               
               
               Cow position:chr19:14940478-14940760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:190
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-939
               
               
               Cow position:chr19:23597099-23597381 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:14959172-14958895 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):52, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:14959665-14959384 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):11, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:14960071-14959790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):242, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:14960237-14959956 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):79, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:23613418-23613701 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:200
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:23613586-23613869 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:192
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):67, 60

               
               
               Conread position:657-940
               
               
               Cow position:chr19:23614090-23614373 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):249, 237

               
               
               Conread position:657-940
               
               
               Cow position:chr19:23614510-23614793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:23614762-23615045 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr19:23649876-23650159 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:196
               
               
               Alignm E-value:8e-36
               
               
               Alignm gaps (pig, cow):66, 57

               
               
               Conread position:657-940
               
               
               Cow position:chr19:43569986-43569705 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):150, 141

               
               
               Conread position:657-942
               
               
               Cow position:chr19:43570070-43569785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr19:14940310-14940598 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:201
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):141, 146

               
               
               Conread position:657-945
               
               
               Cow position:chr19:23613922-23614210 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr19:23614258-23614546 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:187
               
               
               Alignm E-value:5e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr19:23614342-23614630 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:197
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr19:23614426-23614714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:193
               
               
               Alignm E-value:9e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr19:43570238-43569950 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):226, 231

               
               
               Conread position:657-946
               
               
               Cow position:chr19:14960405-14960118 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):227, 241

               
               
               Conread position:658-930
               
               
               Cow position:chr19:20678442-20678714 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:182
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-931
               
               
               Cow position:chr19:14960154-14959881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-932
               
               
               Cow position:chr19:14959582-14959308 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):227, 233

               
               
               Conread position:658-940
               
               
               Cow position:chr19:14940143-14940425 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:196
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):142, 149

               
               
               Conread position:658-940
               
               
               Cow position:chr19:20635394-20635112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-940
               
               
               Cow position:chr19:20635646-20635364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:202
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):242, 248

               
               
               Conread position:658-944
               
               
               Cow position:chr19:23614847-23615131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):258, 0

               
               
               Conread position:658-945
               
               
               Cow position:chr19:14940059-14940346 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:199
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):141, 146

               
               
               Conread position:658-948
               
               
               Cow position:chr19:20678106-20678396 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:198
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):86, 70

               
               
               Conread position:659-925
               
               
               Cow position:chr19:14959092-14958826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:169
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-933
               
               
               Cow position:chr19:14940564-14940838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-35
               
               
               Alignm gaps (pig, cow):79, 49

               
               
               Conread position:659-937
               
               
               Cow position:chr19:14940228-14940506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:193
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-937
               
               
               Cow position:chr19:23614008-23614286 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-937
               
               
               Cow position:chr19:43570152-43569874 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chr19:14939976-14940257 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chr19:20677771-20678052 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:203
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):79, 74

               
               
               Conread position:659-940
               
               
               Cow position:chr19:20678275-20678556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chr19:43570394-43570123 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):112, 0

               
               
               Conread position:659-945
               
               
               Cow position:chr19:14940648-14940934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):79, 73

               
               
               Conread position:659-945
               
               
               Cow position:chr19:20677687-20677973 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-945
               
               
               Cow position:chr19:20677939-20678225 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):80, 69

               
               
               Conread position:659-945
               
               
               Cow position:chr19:20678359-20678645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:202
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-945
               
               
               Cow position:chr19:23597269-23597555 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):141, 145

               
               
               Conread position:659-945
               
               
               Cow position:chr19:23650046-23650332 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:197
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):141, 145

               
               
               Conread position:659-946
               
               
               Cow position:chr19:20635477-20635190 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-946
               
               
               Cow position:chr19:20677855-20678142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:198
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-940
               
               
               Cow position:chr19:23613758-23614037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:199
               
               
               Alignm E-value:4.99983e-42
               
               
               Alignm gaps (pig, cow):79, 89

               
               
               Conread position:661-945
               
               
               Cow position:chr19:23613506-23613790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):139, 144

               
               
               Conread position:670-939
               
               
               Cow position:chr19:20635550-20635281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:196
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-939
               
               
               Cow position:chr19:20677530-20677799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:177
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):78, 57

               
               
               Conread position:670-940
               
               
               Cow position:chr19:20635298-20635028 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-930
               
               
               Cow position:chr19:23649638-23649897 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:165
               
               
               Alignm E-value:7e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-935
               
               
               Cow position:chr19:23597449-23597713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):128, 136

               
               
               Conread position:671-936
               
               
               Cow position:chr19:23649470-23649735 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:175
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):53, 46

               
               
               Conread position:671-939
               
               
               Cow position:chr19:23597197-23597465 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:180
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:676-936
               
               
               Cow position:chr19:14948461-14948202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:169
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):57, 0

               
               
               Conread position:677-937
               
               
               Cow position:chr19:23649812-23650072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:172
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):39, 47

               
               
               Conread position:677-940
               
               
               Cow position:chr19:23613354-23613617 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:677-945
               
               
               Cow position:chr19:20677453-20677721 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:174
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):145, 134

               
               
               Conread position:680-936
               
               
               Cow position:chr19:23597038-23597294 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:162
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:684-945
               
               
               Cow position:chr19:20678216-20678477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:188
               
               
               Alignm E-value:7.00649e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:686-936
               
               
               Cow position:chr19:23649401-23649651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:253
               
               
               Alignm identity:167
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):61, 30

               
               
               Conread position:687-937
               
               
               Cow position:chr19:23614708-23614958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):43, 30

               
               
               Conread position:704-935
               
               
               Cow position:chr19:43570272-43570044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:233
               
               
               Alignm identity:165
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):97, 11

               
               
               Conread position:704-940
               
               
               Cow position:chr19:23613297-23613533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:160
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:728-940
               
               
               Cow position:chr19:20677672-20677884 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:215
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):165, 155

               
               
               Conread position:671-936
               
               
               Cow position:chr21:34222886-34222621 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:171
               
               
               Alignm E-value:5e-22
               
               
               Alignm gaps (pig, cow):67, 62

               
               
               Conread position:343-468
               
               
               Cow position:chr22:14465229-14465354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:126
               
               
               Alignm identity:98
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:343-471
               
               
               Cow position:chr22:14439803-14439931 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:129
               
               
               Alignm identity:100
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:343-480
               
               
               Cow position:chr22:14426731-14426867 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:139
               
               
               Alignm identity:105
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):79, 85

               
               
               Conread position:633-936
               
               
               Cow position:chr22:12399464-12399161 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:206
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):167, 171

               
               
               Conread position:649-940
               
               
               Cow position:chr22:46654493-46654784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):64, 70

               
               
               Conread position:656-843
               
               
               Cow position:chr22:12385095-12384908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:188
               
               
               Alignm identity:126
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-933
               
               
               Cow position:chr22:46654164-46654441 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):227, 233

               
               
               Conread position:656-939
               
               
               Cow position:chr22:11666598-11666881 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):231, 239

               
               
               Conread position:656-940
               
               
               Cow position:chr22:12475734-12475450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):72, 61

               
               
               Conread position:656-945
               
               
               Cow position:chr22:12458625-12458336 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):86, 61

               
               
               Conread position:656-946
               
               
               Cow position:chr22:12499525-12499815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:201
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):60, 71

               
               
               Conread position:656-946
               
               
               Cow position:chr22:14430217-14430507 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:191
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):74, 62

               
               
               Conread position:657-878
               
               
               Cow position:chr22:12458036-12457815 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:223
               
               
               Alignm identity:158
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-881
               
               
               Cow position:chr22:12431672-12431448 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-935
               
               
               Cow position:chr22:11640674-11640952 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:177
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):20, 11

               
               
               Conread position:657-935
               
               
               Cow position:chr22:12475565-12475287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:188
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-935
               
               
               Cow position:chr22:12499694-12499972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):63, 58

               
               
               Conread position:657-936
               
               
               Cow position:chr22:12476069-12475790 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):91, 60

               
               
               Conread position:657-936
               
               
               Cow position:chr22:12499190-12499469 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:179
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):91, 60

               
               
               Conread position:657-937
               
               
               Cow position:chr22:12458120-12457840 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):155, 148

               
               
               Conread position:657-938
               
               
               Cow position:chr22:12498938-12499219 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):236, 249

               
               
               Conread position:657-939
               
               
               Cow position:chr22:12385262-12384980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):143, 150

               
               
               Conread position:657-939
               
               
               Cow position:chr22:12399104-12398822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:199
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):67, 60

               
               
               Conread position:657-939
               
               
               Cow position:chr22:12418791-12418509 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-939
               
               
               Cow position:chr22:12476153-12475871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:179
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):157, 148

               
               
               Conread position:657-939
               
               
               Cow position:chr22:12499106-12499388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12385600-12385315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):83, 90

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12399188-12398905 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):59, 72

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12399272-12398989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:199
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):67, 52

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12399356-12399073 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:207
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):73, 60

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12399692-12399409 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:198
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):143, 151

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12431252-12430969 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12431756-12431473 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):67, 58

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12432260-12431977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:177
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):135, 151

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12458372-12458089 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12475649-12475366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12475901-12475618 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):71, 60

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12476321-12476038 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr22:12499610-12499893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr22:46654081-46654364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):33, 25

               
               
               Conread position:657-945
               
               
               Cow position:chr22:12399524-12399236 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:197
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):47, 58

               
               
               Conread position:657-945
               
               
               Cow position:chr22:12399608-12399320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:196
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):59, 67

               
               
               Conread position:657-945
               
               
               Cow position:chr22:14467959-14468247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):163, 155

               
               
               Conread position:657-946
               
               
               Cow position:chr22:11641094-11641383 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:195
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):79, 68

               
               
               Conread position:657-948
               
               
               Cow position:chr22:12419312-12419021 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-948
               
               
               Cow position:chr22:12431084-12430793 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-38
               
               
               Alignm gaps (pig, cow):60, 69

               
               
               Conread position:658-931
               
               
               Cow position:chr22:12399019-12398746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:181
               
               
               Alignm E-value:9e-28
               
               
               Alignm gaps (pig, cow):58, 70

               
               
               Conread position:658-937
               
               
               Cow position:chr22:12385431-12385150 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):26, 61

               
               
               Conread position:658-937
               
               
               Cow position:chr22:14429715-14429994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):55, 65

               
               
               Conread position:658-938
               
               
               Cow position:chr22:14468044-14468324 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):78, 70

               
               
               Conread position:658-945
               
               
               Cow position:chr22:14430555-14430842 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:189
               
               
               Alignm E-value:8e-27
               
               
               Alignm gaps (pig, cow):80, 65

               
               
               Conread position:658-946
               
               
               Cow position:chr22:14429883-14430171 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):80, 74

               
               
               Conread position:659-936
               
               
               Cow position:chr22:12476235-12475958 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):53, 64

               
               
               Conread position:659-936
               
               
               Cow position:chr22:12499024-12499301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):53, 64

               
               
               Conread position:659-937
               
               
               Cow position:chr22:12399774-12399496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:193
               
               
               Alignm E-value:9.99967e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-938
               
               
               Cow position:chr22:12430998-12430719 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):141, 149

               
               
               Conread position:659-940
               
               
               Cow position:chr22:12430914-12430633 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):57, 67

               
               
               Conread position:659-945
               
               
               Cow position:chr22:12458286-12458000 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-945
               
               
               Cow position:chr22:14429800-14430086 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-946
               
               
               Cow position:chr22:12432174-12431887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):65, 56

               
               
               Conread position:660-936
               
               
               Cow position:chr22:14430473-14430749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):158, 144

               
               
               Conread position:661-933
               
               
               Cow position:chr22:46654588-46654863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):6, 55

               
               
               Conread position:664-945
               
               
               Cow position:chr22:12475978-12475697 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:194
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):220, 242

               
               
               Conread position:665-940
               
               
               Cow position:chr22:14430058-14430333 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):149, 136

               
               
               Conread position:670-937
               
               
               Cow position:chr22:12385333-12385066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):60, 47

               
               
               Conread position:670-937
               
               
               Cow position:chr22:14468224-14468491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:177
               
               
               Alignm E-value:8e-27
               
               
               Alignm gaps (pig, cow):61, 39

               
               
               Conread position:670-938
               
               
               Cow position:chr22:46654430-46654698 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):20, 12

               
               
               Conread position:670-940
               
               
               Cow position:chr22:12431575-12431305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:171
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-940
               
               
               Cow position:chr22:14468140-14468410 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):145, 131

               
               
               Conread position:670-940
               
               
               Cow position:chr22:46654262-46654532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):20, 12

               
               
               Conread position:670-945
               
               
               Cow position:chr22:12432415-12432140 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):67, 62

               
               
               Conread position:670-945
               
               
               Cow position:chr22:12475804-12475529 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-945
               
               
               Cow position:chr22:14429643-14429918 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):127, 132

               
               
               Conread position:670-945
               
               
               Cow position:chr22:14429979-14430254 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):68, 62

               
               
               Conread position:671-882
               
               
               Cow position:chr22:11666697-11666908 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):130, 145

               
               
               Conread position:671-882
               
               
               Cow position:chr22:11701435-11701646 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:213
               
               
               Alignm identity:143
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):130, 145

               
               
               Conread position:671-928
               
               
               Cow position:chr22:12385164-12384907 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:170
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):52, 44

               
               
               Conread position:671-936
               
               
               Cow position:chr22:12458526-12458261 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:173
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-945
               
               
               Cow position:chr22:11640856-11641130 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:185
               
               
               Alignm E-value:7e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-945
               
               
               Cow position:chr22:12432498-12432224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):129, 134

               
               
               Conread position:671-945
               
               
               Cow position:chr22:12476391-12476117 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:175
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):129, 133

               
               
               Conread position:671-945
               
               
               Cow position:chr22:12498868-12499142 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:178
               
               
               Alignm E-value:8e-27
               
               
               Alignm gaps (pig, cow):129, 133

               
               
               Conread position:676-945
               
               
               Cow position:chr22:12499293-12499562 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:184
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):208, 230

               
               
               Conread position:677-939
               
               
               Cow position:chr22:12419023-12418761 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:678-945
               
               
               Cow position:chr22:12431904-12431636 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):7, 40

               
               
               Conread position:685-933
               
               
               Cow position:chr22:46654025-46654273 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:166
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):62, 49

               
               
               Conread position:685-945
               
               
               Cow position:chr22:12431308-12431048 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):115, 128

               
               
               Conread position:687-940
               
               
               Cow position:chr22:12431138-12430885 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:164
               
               
               Alignm E-value:7e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:689-946
               
               
               Cow position:chr22:12431808-12431551 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:174
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):111, 115

               
               
               Conread position:689-948
               
               
               Cow position:chr22:12499474-12499733 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:260
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:705-945
               
               
               Cow position:chr22:11640806-11641046 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:710-931
               
               
               Cow position:chr22:12458403-12458183 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:222
               
               
               Alignm identity:148
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):216, 0

               
               
               Conread position:728-945
               
               
               Cow position:chr22:12399789-12399572 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:218
               
               
               Alignm identity:157
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:729-945
               
               
               Cow position:chr22:12399866-12399656 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:217
               
               
               Alignm identity:147
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):26, 0

               
               
               Conread position:734-939
               
               
               Cow position:chr22:11701414-11701619 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:138
               
               
               Alignm E-value:6e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:737-939
               
               
               Cow position:chr22:14467955-14468157 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:134
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:743-945
               
               
               Cow position:chr22:12458118-12457916 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:140
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):71, 59

               
               
               Conread position:746-940
               
               
               Cow position:chr22:46654002-46654196 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:132
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):138, 148

               
               
               Conread position:760-939
               
               
               Cow position:chr22:12419024-12418845 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:122
               
               
               Alignm E-value:4e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:633-937
               
               
               Cow position:chr23:25626074-25626378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:306
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):162, 172

               
               
               Conread position:648-940
               
               
               Cow position:chr23:24639695-24639987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-936
               
               
               Cow position:chr23:24535894-24535614 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-939
               
               
               Cow position:chr23:24547179-24546896 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-834
               
               
               Cow position:chr23:24546842-24546665 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:178
               
               
               Alignm identity:124
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-880
               
               
               Cow position:chr23:24546926-24546703 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:150
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-881
               
               
               Cow position:chr23:24522416-24522192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:150
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):150, 143

               
               
               Conread position:657-920
               
               
               Cow position:chr23:25698588-25698325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:174
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):134, 145

               
               
               Conread position:657-931
               
               
               Cow position:chr23:24560402-24560128 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:190
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-932
               
               
               Cow position:chr23:25660471-25660746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:183
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):72, 60

               
               
               Conread position:657-935
               
               
               Cow position:chr23:24639788-24640066 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-936
               
               
               Cow position:chr23:24535809-24535530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:178
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-936
               
               
               Cow position:chr23:24560654-24560375 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:192
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):73, 60

               
               
               Conread position:657-936
               
               
               Cow position:chr23:25626014-25626293 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-936
               
               
               Cow position:chr23:25626599-25626878 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):59, 67

               
               
               Conread position:657-937
               
               
               Cow position:chr23:25660219-25660499 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-937
               
               
               Cow position:chr23:25660303-25660583 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:190
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-939
               
               
               Cow position:chr23:24547262-24546980 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:199
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr23:24522500-24522217 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:188
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):72, 58

               
               
               Conread position:657-940
               
               
               Cow position:chr23:24547094-24546811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr23:24626376-24626659 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:201
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr23:24560486-24560198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):143, 150

               
               
               Conread position:657-946
               
               
               Cow position:chr23:24560570-24560281 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:204
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-946
               
               
               Cow position:chr23:24626460-24626747 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:202
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):147, 143

               
               
               Conread position:658-935
               
               
               Cow position:chr23:24535976-24535699 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):142, 150

               
               
               Conread position:658-936
               
               
               Cow position:chr23:25724058-25723780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):80, 75

               
               
               Conread position:658-943
               
               
               Cow position:chr23:24654102-24654387 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:183
               
               
               Alignm E-value:9e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-945
               
               
               Cow position:chr23:24560821-24560534 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:190
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):142, 150

               
               
               Conread position:660-946
               
               
               Cow position:chr23:25626686-25626972 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:183
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):62, 55

               
               
               Conread position:670-940
               
               
               Cow position:chr23:24626305-24626575 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:192
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):53, 46

               
               
               Conread position:670-940
               
               
               Cow position:chr23:25660148-25660418 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:184
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):59, 45

               
               
               Conread position:671-939
               
               
               Cow position:chr23:24639634-24639902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:178
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):144, 150

               
               
               Conread position:671-939
               
               
               Cow position:chr23:25626196-25626464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:175
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):52, 43

               
               
               Conread position:672-936
               
               
               Cow position:chr23:25626365-25626626 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:170
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):211, 0

               
               
               Conread position:672-938
               
               
               Cow position:chr23:24536046-24535780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:172
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):51, 43

               
               
               Conread position:672-940
               
               
               Cow position:chr23:24522569-24522301 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):128, 150

               
               
               Conread position:673-936
               
               
               Cow position:chr23:24639383-24639647 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:171
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):12, 52

               
               
               Conread position:673-939
               
               
               Cow position:chr23:24560722-24560456 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:189
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):127, 131

               
               
               Conread position:673-940
               
               
               Cow position:chr23:24639552-24639819 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):36, 50

               
               
               Conread position:677-939
               
               
               Cow position:chr23:25660407-25660669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:170
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):123, 127

               
               
               Conread position:684-878
               
               
               Cow position:chr23:24521967-24521773 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:135
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):32, 40

               
               
               Conread position:684-940
               
               
               Cow position:chr23:24654044-24654300 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:176
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:684-946
               
               
               Cow position:chr23:24522722-24522463 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:263
               
               
               Alignm identity:171
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):114, 0

               
               
               Conread position:689-881
               
               
               Cow position:chr23:25698304-25698112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:133
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):118, 111

               
               
               Conread position:689-933
               
               
               Cow position:chr23:24639232-24639476 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:163
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):110, 115

               
               
               Conread position:704-939
               
               
               Cow position:chr23:25724097-25723861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:163
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):28, 0

               
               
               Conread position:725-940
               
               
               Cow position:chr23:24626276-24626491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:216
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:728-940
               
               
               Cow position:chr23:24522597-24522385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:143
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):72, 77

               
               
               Conread position:728-940
               
               
               Cow position:chr23:25626586-25626798 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:145
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):71, 76

               
               
               Conread position:728-945
               
               
               Cow position:chr23:24547275-24547058 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:159
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):77, 73

               
               
               Conread position:757-938
               
               
               Cow position:chr23:24547330-24547149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:183
               
               
               Alignm identity:129
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):34, 47

               
               
               Conread position:629-945
               
               
               Cow position:chr24:17078306-17077990 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:637-937
               
               
               Cow position:chr24:17036163-17035863 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:208
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):163, 170

               
               
               Conread position:657-923
               
               
               Cow position:chr24:17077774-17077508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):81, 76

               
               
               Conread position:657-928
               
               
               Cow position:chr24:17077858-17077587 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-932
               
               
               Cow position:chr24:17013231-17013506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-934
               
               
               Cow position:chr24:17035303-17035026 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:175
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):228, 234

               
               
               Conread position:657-936
               
               
               Cow position:chr24:17035471-17035192 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:187
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-936
               
               
               Cow position:chr24:17036059-17035780 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:193
               
               
               Alignm E-value:9e-39
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-937
               
               
               Cow position:chr24:17035891-17035611 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-937
               
               
               Cow position:chr24:17036311-17036031 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-937
               
               
               Cow position:chr24:17036479-17036199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:194
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-938
               
               
               Cow position:chr24:17035639-17035358 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-938
               
               
               Cow position:chr24:17070778-17071059 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr24:17013147-17013430 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):162, 152

               
               
               Conread position:657-940
               
               
               Cow position:chr24:17035387-17035104 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):143, 148

               
               
               Conread position:657-940
               
               
               Cow position:chr24:17070526-17070809 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:195
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr24:17070694-17070977 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:200
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr24:17036227-17035939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:192
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-945
               
               
               Cow position:chr24:17078110-17077822 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:658-938
               
               
               Cow position:chr24:17070443-17070723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-945
               
               
               Cow position:chr24:17070611-17070898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:198
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):225, 238

               
               
               Conread position:659-937
               
               
               Cow position:chr24:17035721-17035443 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-937
               
               
               Cow position:chr24:17077940-17077662 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):79, 74

               
               
               Conread position:659-945
               
               
               Cow position:chr24:17035553-17035267 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):141, 145

               
               
               Conread position:670-939
               
               
               Cow position:chr24:17035962-17035693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:187
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):39, 53

               
               
               Conread position:670-939
               
               
               Cow position:chr24:17078013-17077744 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-940
               
               
               Cow position:chr24:17036382-17036112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:178
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):204, 192

               
               
               Conread position:676-940
               
               
               Cow position:chr24:17036544-17036280 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:686-938
               
               
               Cow position:chr24:17070387-17070639 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:254
               
               
               Alignm identity:164
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):42, 52

               
               
               Conread position:689-936
               
               
               Cow position:chr24:17035775-17035528 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:248
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:726-939
               
               
               Cow position:chr24:17078125-17077912 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:146
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:740-936
               
               
               Cow position:chr24:17013146-17013342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:198
               
               
               Alignm identity:135
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):60, 65

               
               
               Conread position:657-927
               
               
               Cow position:chr25:33127953-33128223 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:184
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-932
               
               
               Cow position:chr25:326990-327265 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:186
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):65, 58

               
               
               Conread position:657-936
               
               
               Cow position:chr25:33157406-33157127 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:191
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):228, 238

               
               
               Conread position:657-936
               
               
               Cow position:chr25:33298630-33298909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:181
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):141, 150

               
               
               Conread position:657-938
               
               
               Cow position:chr25:34769973-34769692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:198
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):59, 66

               
               
               Conread position:657-939
               
               
               Cow position:chr25:33298798-33299080 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:182
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):141, 150

               
               
               Conread position:657-939
               
               
               Cow position:chr25:34447257-34447539 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:185
               
               
               Alignm E-value:9e-30
               
               
               Alignm gaps (pig, cow):11, 18

               
               
               Conread position:657-940
               
               
               Cow position:chr25:33157154-33156871 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr25:33298966-33299249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr25:34769637-34769354 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:196
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr25:36801034-36801317 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):81, 76

               
               
               Conread position:657-945
               
               
               Cow position:chr25:23420450-23420738 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:202
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):75, 60

               
               
               Conread position:657-945
               
               
               Cow position:chr25:33157070-33156783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:194
               
               
               Alignm E-value:7e-37
               
               
               Alignm gaps (pig, cow):271, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr25:33157322-33157034 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):228, 238

               
               
               Conread position:657-945
               
               
               Cow position:chr25:33157490-33157202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:191
               
               
               Alignm E-value:5e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr25:33298882-33299170 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr25:36800950-36801238 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):227, 235

               
               
               Conread position:657-946
               
               
               Cow position:chr25:34770057-34769768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:198
               
               
               Alignm E-value:3.00004e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-936
               
               
               Cow position:chr25:36800867-36801145 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:184
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-945
               
               
               Cow position:chr25:33299387-33299674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:183
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):65, 57

               
               
               Conread position:658-948
               
               
               Cow position:chr25:23420535-23420825 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:203
               
               
               Alignm E-value:1.4013e-45
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-899
               
               
               Cow position:chr25:23420620-23420860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:241
               
               
               Alignm identity:163
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-936
               
               
               Cow position:chr25:34769803-34769526 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-939
               
               
               Cow position:chr25:33299304-33299584 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):140, 148

               
               
               Conread position:659-939
               
               
               Cow position:chr25:34447091-34447371 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:177
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chr25:33299136-33299417 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:190
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):79, 66

               
               
               Conread position:659-940
               
               
               Cow position:chr25:33299472-33299753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-35
               
               
               Alignm gaps (pig, cow):79, 58

               
               
               Conread position:659-945
               
               
               Cow position:chr25:36801528-36801814 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:190
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):76, 58

               
               
               Conread position:660-939
               
               
               Cow position:chr25:34433510-34433786 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):256, 95

               
               
               Conread position:661-939
               
               
               Cow position:chr25:36801362-36801640 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):137, 146

               
               
               Conread position:661-940
               
               
               Cow position:chr25:33298550-33298829 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:193
               
               
               Alignm E-value:8e-39
               
               
               Alignm gaps (pig, cow):139, 149

               
               
               Conread position:664-936
               
               
               Cow position:chr25:34446928-34447200 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):17, 26

               
               
               Conread position:664-940
               
               
               Cow position:chr25:34769882-34769606 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:188
               
               
               Alignm E-value:7e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:665-936
               
               
               Cow position:chr25:34769713-34769442 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:665-940
               
               
               Cow position:chr25:33298470-33298745 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:176
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):97, 89

               
               
               Conread position:670-940
               
               
               Cow position:chr25:33127798-33128068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:192
               
               
               Alignm E-value:1.96182e-44
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-948
               
               
               Cow position:chr25:34769540-34769262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:190
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):68, 63

               
               
               Conread position:671-880
               
               
               Cow position:chr25:33145179-33145388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:210
               
               
               Alignm identity:141
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-920
               
               
               Cow position:chr25:33299568-33299817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:169
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):52, 44

               
               
               Conread position:671-920
               
               
               Cow position:chr25:36801708-36801957 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:174
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):127, 136

               
               
               Conread position:671-936
               
               
               Cow position:chr25:33298728-33298993 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:177
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):56, 46

               
               
               Conread position:671-936
               
               
               Cow position:chr25:34447439-34447704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):67, 54

               
               
               Conread position:671-937
               
               
               Cow position:chr25:33127883-33128149 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:193
               
               
               Alignm E-value:5.60519e-45
               
               
               Alignm gaps (pig, cow):45, 49

               
               
               Conread position:671-940
               
               
               Cow position:chr25:23420380-23420649 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:192
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):56, 46

               
               
               Conread position:671-940
               
               
               Cow position:chr25:33157224-33156955 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:190
               
               
               Alignm E-value:3.9937e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-945
               
               
               Cow position:chr25:33299064-33299338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:179
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-945
               
               
               Cow position:chr25:33299232-33299506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:178
               
               
               Alignm E-value:7e-27
               
               
               Alignm gaps (pig, cow):127, 136

               
               
               Conread position:671-945
               
               
               Cow position:chr25:36801624-36801898 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:179
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):52, 44

               
               
               Conread position:675-940
               
               
               Cow position:chr25:33305879-33305620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:170
               
               
               Alignm E-value:4e-22
               
               
               Alignm gaps (pig, cow):61, 0

               
               
               Conread position:675-945
               
               
               Cow position:chr25:36800632-36800902 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:173
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:684-878
               
               
               Cow position:chr25:34433030-34433224 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:197
               
               
               Alignm identity:135
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):30, 39

               
               
               Conread position:687-935
               
               
               Cow position:chr25:366738-366986 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:162
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):212, 218

               
               
               Conread position:688-945
               
               
               Cow position:chr25:33127732-33127989 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:259
               
               
               Alignm identity:176
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):42, 27

               
               
               Conread position:689-937
               
               
               Cow position:chr25:33145113-33145361 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:250
               
               
               Alignm identity:166
               
               
               Alignm E-value:8e-28
               
               
               Alignm gaps (pig, cow):111, 119

               
               
               Conread position:689-938
               
               
               Cow position:chr25:34447205-34447454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:165
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):49, 43

               
               
               Conread position:689-939
               
               
               Cow position:chr25:34770109-34769859 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:251
               
               
               Alignm identity:173
               
               
               Alignm E-value:6e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:689-940
               
               
               Cow position:chr25:34447037-34447288 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:161
               
               
               Alignm E-value:5e-24
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:691-929
               
               
               Cow position:chr25:33305947-33305713 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:160
               
               
               Alignm E-value:6e-26
               
               
               Alignm gaps (pig, cow):107, 0

               
               
               Conread position:704-945
               
               
               Cow position:chr25:23420329-23420570 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:242
               
               
               Alignm identity:170
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:738-939
               
               
               Cow position:chr25:34770146-34769943 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:205
               
               
               Alignm identity:144
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):19, 71

               
               
               Conread position:743-940
               
               
               Cow position:chr25:34433005-34433202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:199
               
               
               Alignm identity:140
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):44, 61

               
               
               Conread position:657-933
               
               
               Cow position:chr27:21615872-21615596 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:183
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):52, 66

               
               
               Conread position:657-936
               
               
               Cow position:chr27:21615704-21615426 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:185
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):12, 20

               
               
               Conread position:657-945
               
               
               Cow position:chr27:21615788-21615501 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):257, 224

               
               
               Conread position:661-944
               
               
               Cow position:chr27:21615952-21615669 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:181
               
               
               Alignm E-value:3e-23
               
               
               Alignm gaps (pig, cow):53, 62

               
               
               Conread position:657-858
               
               
               Cow position:chr28:7810331-7810532 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:134
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-920
               
               
               Cow position:chr28:7758071-7758334 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:264
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-935
               
               
               Cow position:chr28:9253086-9253364 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:191
               
               
               Alignm E-value:8e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-937
               
               
               Cow position:chr28:7757399-7757679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-938
               
               
               Cow position:chr28:7757819-7758100 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):66, 50

               
               
               Conread position:657-938
               
               
               Cow position:chr28:9289984-9290264 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:186
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):70, 224

               
               
               Conread position:657-939
               
               
               Cow position:chr28:7757987-7758269 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-939
               
               
               Cow position:chr28:9253254-9253536 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr28:7757483-7757766 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr28:7757735-7758018 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):143, 150

               
               
               Conread position:657-940
               
               
               Cow position:chr28:7757903-7758186 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:188
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):57, 63

               
               
               Conread position:657-940
               
               
               Cow position:chr28:7810415-7810689 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):224, 123

               
               
               Conread position:657-943
               
               
               Cow position:chr28:9253338-9253625 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):266, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr28:7757651-7757939 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:196
               
               
               Alignm E-value:2e-37
               
               
               Alignm gaps (pig, cow):52, 66

               
               
               Conread position:657-945
               
               
               Cow position:chr28:7758391-7758679 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr28:9253170-9253458 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:197
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-948
               
               
               Cow position:chr28:34679493-34679199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:200
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):72, 61

               
               
               Conread position:659-940
               
               
               Cow position:chr28:9298803-9299081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:185
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):64, 9

               
               
               Conread position:659-940
               
               
               Cow position:chr28:11333816-11333535 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:182
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):31, 23

               
               
               Conread position:659-946
               
               
               Cow position:chr28:7810660-7810947 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):64, 49

               
               
               Conread position:668-937
               
               
               Cow position:chr28:33210221-33210491 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:173
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):7, 137

               
               
               Conread position:669-946
               
               
               Cow position:chr28:9299216-9299493 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:186
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):58, 48

               
               
               Conread position:670-906
               
               
               Cow position:chr28:33210392-33210629 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:239
               
               
               Alignm identity:157
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):37, 53

               
               
               Conread position:671-937
               
               
               Cow position:chr28:7758489-7758755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:174
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):45, 49

               
               
               Conread position:671-938
               
               
               Cow position:chr28:34673520-34673787 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:167
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-940
               
               
               Cow position:chr28:7757581-7757850 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:183
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):123, 136

               
               
               Conread position:671-944
               
               
               Cow position:chr28:9298564-9298835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:182
               
               
               Alignm E-value:5e-25
               
               
               Alignm gaps (pig, cow):37, 47

               
               
               Conread position:671-945
               
               
               Cow position:chr28:7810588-7810862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:182
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):127, 136

               
               
               Conread position:671-945
               
               
               Cow position:chr28:9253016-9253290 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:187
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):129, 133

               
               
               Conread position:671-948
               
               
               Cow position:chr28:9290416-9290692 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):23, 28

               
               
               Conread position:693-940
               
               
               Cow position:chr28:7810283-7810530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:249
               
               
               Alignm identity:165
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):22, 30

               
               
               Conread position:704-939
               
               
               Cow position:chr28:34673384-34673620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:153
               
               
               Alignm E-value:1e-22
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:710-945
               
               
               Cow position:chr28:9252971-9253206 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:237
               
               
               Alignm identity:159
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):88, 97

               
               
               Conread position:657-948
               
               
               Cow position:chr29:39627609-39627318 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:660-932
               
               
               Cow position:chr29:39627105-39626833 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-33
               
               
               Alignm gaps (pig, cow):135, 144

               
               
               Conread position:661-936
               
               
               Cow position:chr29:39627188-39626913 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:722-946
               
               
               Cow position:chr29:39627211-39626987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:151
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:128-266
               
               
               Cow position:chr7:11486455-11486591 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:141
               
               
               Alignm identity:108
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):14, 62

               
               
               Conread position:341-477
               
               
               Cow position:chr7:11488085-11488220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:137
               
               
               Alignm identity:123
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):7, 0

               
               
               Conread position:571-661
               
               
               Cow position:chr7:11601776-11601686 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:91
               
               
               Alignm identity:78
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:618-940
               
               
               Cow position:chr7:42879329-42879010 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:217
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):183, 36

               
               
               Conread position:626-946
               
               
               Cow position:chr7:11434859-11434544 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:324
               
               
               Alignm identity:213
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):116, 8

               
               
               Conread position:646-948
               
               
               Cow position:chr7:8243777-8244078 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:304
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):11, 218

               
               
               Conread position:648-946
               
               
               Cow position:chr7:3180343-3180641 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:200
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:655-945
               
               
               Cow position:chr7:11601206-11600916 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:279
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-879
               
               
               Cow position:chr7:8243872-8244092 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:225
               
               
               Alignm identity:150
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):162, 123

               
               
               Conread position:656-921
               
               
               Cow position:chr7:11434505-11434240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:175
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):82, 69

               
               
               Conread position:656-925
               
               
               Cow position:chr7:8325891-8326163 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):61, 68

               
               
               Conread position:656-933
               
               
               Cow position:chr7:8243452-8243729 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:181
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):63, 82

               
               
               Conread position:656-935
               
               
               Cow position:chr7:8243033-8243312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:177
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):79, 83

               
               
               Conread position:656-937
               
               
               Cow position:chr7:8243704-8243985 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:189
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):61, 80

               
               
               Conread position:656-940
               
               
               Cow position:chr7:8277746-8278030 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:186
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):91, 69

               
               
               Conread position:656-940
               
               
               Cow position:chr7:8325387-8325671 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:183
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-940
               
               
               Cow position:chr7:11434666-11434389 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):82, 72

               
               
               Conread position:656-945
               
               
               Cow position:chr7:1014837-1015126 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:196
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-945
               
               
               Cow position:chr7:8243620-8243909 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-945
               
               
               Cow position:chr7:8325135-8325424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:187
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):82, 66

               
               
               Conread position:656-945
               
               
               Cow position:chr7:8325303-8325592 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):66, 82

               
               
               Conread position:656-945
               
               
               Cow position:chr7:8325639-8325928 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:185
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):82, 69

               
               
               Conread position:656-945
               
               
               Cow position:chr7:8325807-8326096 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:199
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):165, 154

               
               
               Conread position:656-946
               
               
               Cow position:chr7:8242949-8243239 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-946
               
               
               Cow position:chr7:8325051-8325341 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:197
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:656-946
               
               
               Cow position:chr7:11434750-11434467 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):83, 66

               
               
               Conread position:656-947
               
               
               Cow position:chr7:8325555-8325846 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):82, 66

               
               
               Conread position:656-948
               
               
               Cow position:chr7:8324799-8325091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:296
               
               
               Alignm identity:201
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):75, 60

               
               
               Conread position:657-867
               
               
               Cow position:chr7:11600616-11600411 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:211
               
               
               Alignm identity:147
               
               
               Alignm E-value:4e-27
               
               
               Alignm gaps (pig, cow):190, 0

               
               
               Conread position:657-879
               
               
               Cow position:chr7:1440041-1440263 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:224
               
               
               Alignm identity:150
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):150, 135

               
               
               Conread position:657-880
               
               
               Cow position:chr7:1439453-1439674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:226
               
               
               Alignm identity:154
               
               
               Alignm E-value:8e-24
               
               
               Alignm gaps (pig, cow):63, 43

               
               
               Conread position:657-931
               
               
               Cow position:chr7:3180604-3180877 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):81, 59

               
               
               Conread position:657-933
               
               
               Cow position:chr7:3179932-3180208 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:193
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):143, 148

               
               
               Conread position:657-936
               
               
               Cow position:chr7:42879041-42878762 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):144, 150

               
               
               Conread position:657-937
               
               
               Cow position:chr7:3179764-3180044 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:199
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-937
               
               
               Cow position:chr7:42878621-42878341 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-34
               
               
               Alignm gaps (pig, cow):143, 150

               
               
               Conread position:657-938
               
               
               Cow position:chr7:1015006-1015287 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):67, 59

               
               
               Conread position:657-938
               
               
               Cow position:chr7:3180016-3180297 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:193
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-939
               
               
               Cow position:chr7:42879125-42878843 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:195
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr7:1014754-1015037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:186
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):67, 60

               
               
               Conread position:657-940
               
               
               Cow position:chr7:1439958-1440240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):85, 11

               
               
               Conread position:657-940
               
               
               Cow position:chr7:11600868-11600585 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr7:11601036-11600753 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:194
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr7:42878957-42878674 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:201
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):144, 150

               
               
               Conread position:657-945
               
               
               Cow position:chr7:1014340-1014628 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr7:1015090-1015378 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:189
               
               
               Alignm E-value:7e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr7:3180268-3180556 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:201
               
               
               Alignm E-value:6.00036e-42
               
               
               Alignm gaps (pig, cow):243, 249

               
               
               Conread position:657-945
               
               
               Cow position:chr7:18390481-18390768 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:189
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):282, 0

               
               
               Conread position:657-948
               
               
               Cow position:chr7:18390229-18390520 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:199
               
               
               Alignm E-value:1e-38
               
               
               Alignm gaps (pig, cow):66, 58

               
               
               Conread position:658-918
               
               
               Cow position:chr7:11600699-11600439 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:262
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):53, 46

               
               
               Conread position:658-937
               
               
               Cow position:chr7:8325221-8325500 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-30
               
               
               Alignm gaps (pig, cow):84, 57

               
               
               Conread position:658-939
               
               
               Cow position:chr7:11600951-11600670 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:210
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-939
               
               
               Cow position:chr7:18390314-18390595 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:196
               
               
               Alignm E-value:7.00649e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-940
               
               
               Cow position:chr7:3179849-3180131 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:195
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-940
               
               
               Cow position:chr7:8325473-8325755 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:184
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):80, 70

               
               
               Conread position:658-948
               
               
               Cow position:chr7:8243119-8243408 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:293
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-21
               
               
               Alignm gaps (pig, cow):18, 28

               
               
               Conread position:659-935
               
               
               Cow position:chr7:1015176-1015452 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:190
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):69, 49

               
               
               Conread position:659-936
               
               
               Cow position:chr7:8278001-8278278 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:193
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):79, 58

               
               
               Conread position:659-937
               
               
               Cow position:chr7:3180186-3180464 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-938
               
               
               Cow position:chr7:42878787-42878508 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:193
               
               
               Alignm E-value:5.99994e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chr7:8277917-8278198 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):58, 79

               
               
               Conread position:659-940
               
               
               Cow position:chr7:42878871-42878590 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:191
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-945
               
               
               Cow position:chr7:3180102-3180388 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:203
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-945
               
               
               Cow position:chr7:11600782-11600496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:221
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-945
               
               
               Cow position:chr7:11601118-11600832 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:287
               
               
               Alignm identity:195
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-946
               
               
               Cow position:chr7:3180438-3180725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:200
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):81, 89

               
               
               Conread position:659-946
               
               
               Cow position:chr7:8278253-8278538 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):73, 58

               
               
               Conread position:660-939
               
               
               Cow position:chr7:8324887-8325166 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:194
               
               
               Alignm E-value:1e-39
               
               
               Alignm gaps (pig, cow):77, 56

               
               
               Conread position:660-940
               
               
               Cow position:chr7:8278170-8278450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):56, 78

               
               
               Conread position:660-940
               
               
               Cow position:chr7:42879206-42878926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-937
               
               
               Cow position:chr7:1014926-1015202 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:192
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-938
               
               
               Cow position:chr7:42878701-42878424 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):139, 145

               
               
               Conread position:664-932
               
               
               Cow position:chr7:3180527-3180795 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:188
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-936
               
               
               Cow position:chr7:1439806-1440068 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:176
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):124, 7

               
               
               Conread position:670-940
               
               
               Cow position:chr7:8278096-8278366 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:274
               
               
               Alignm identity:198
               
               
               Alignm E-value:7.00649e-43
               
               
               Alignm gaps (pig, cow):68, 46

               
               
               Conread position:670-945
               
               
               Cow position:chr7:8243382-8243657 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:180
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):48, 56

               
               
               Conread position:670-945
               
               
               Cow position:chr7:8324729-8325004 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:187
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):72, 48

               
               
               Conread position:671-940
               
               
               Cow position:chr7:1438414-1438683 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:172
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):26, 10

               
               
               Conread position:671-940
               
               
               Cow position:chr7:8277677-8277946 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:182
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-948
               
               
               Cow position:chr7:42878523-42878244 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:184
               
               
               Alignm E-value:2e-23
               
               
               Alignm gaps (pig, cow):52, 44

               
               
               Conread position:676-883
               
               
               Cow position:chr7:18390584-18390791 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:208
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:676-940
               
               
               Cow position:chr7:8277598-8277862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:266
               
               
               Alignm identity:178
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):49, 40

               
               
               Conread position:676-940
               
               
               Cow position:chr7:18390164-18390428 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:179
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:677-937
               
               
               Cow position:chr7:18390417-18390677 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:261
               
               
               Alignm identity:173
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:677-946
               
               
               Cow position:chr7:1014276-1014545 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:183
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):39, 46

               
               
               Conread position:685-939
               
               
               Cow position:chr7:18390005-18390259 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:163
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):121, 129

               
               
               Conread position:689-945
               
               
               Cow position:chr7:3179712-3179968 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:257
               
               
               Alignm identity:169
               
               
               Alignm E-value:5e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:732-945
               
               
               Cow position:chr7:11601213-11601000 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:214
               
               
               Alignm identity:152
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:737-938
               
               
               Cow position:chr7:18390141-18390342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:202
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:741-936
               
               
               Cow position:chr7:11434504-11434309 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:138
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:741-945
               
               
               Cow position:chr7:8277579-8277783 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:143
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):71, 59

               
               
               Conread position:741-946
               
               
               Cow position:chr7:8243621-8243826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:135
               
               
               Alignm E-value:6e-21
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:741-946
               
               
               Cow position:chr7:8277915-8278120 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:209
               
               
               Alignm identity:152
               
               
               Alignm E-value:5e-30
               
               
               Alignm gaps (pig, cow):60, 68

               
               
               Conread position:741-946
               
               
               Cow position:chr7:8325808-8326013 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:206
               
               
               Alignm identity:147
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:743-936
               
               
               Cow position:chr7:1014672-1014865 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:194
               
               
               Alignm identity:133
               
               
               Alignm E-value:9e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:745-946
               
               
               Cow position:chr7:1014260-1014461 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:203
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):55, 62

               
               
               Conread position:754-945
               
               
               Cow position:chr7:8277256-8277447 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:192
               
               
               Alignm identity:129
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:639-937
               
               
               Cow position:chr8:48406657-48406359 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:299
               
               
               Alignm identity:187
               
               
               Alignm E-value:3e-26
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:650-936
               
               
               Cow position:chr8:55580881-55581168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:196
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):10, 0

               
               
               Conread position:651-946
               
               
               Cow position:chr8:55580799-55581094 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:298
               
               
               Alignm identity:192
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):26, 35

               
               
               Conread position:656-939
               
               
               Cow position:chr8:46816699-46816982 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):227, 232

               
               
               Conread position:656-940
               
               
               Cow position:chr8:46816195-46816479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:187
               
               
               Alignm E-value:6e-33
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-925
               
               
               Cow position:chr8:55581393-55581661 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:178
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):143, 147

               
               
               Conread position:657-933
               
               
               Cow position:chr8:48407311-48407035 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:182
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-936
               
               
               Cow position:chr8:46816532-46816811 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:193
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-936
               
               
               Cow position:chr8:55581141-55581420 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-31
               
               
               Alignm gaps (pig, cow):59, 66

               
               
               Conread position:657-937
               
               
               Cow position:chr8:46816112-46816392 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:180
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-937
               
               
               Cow position:chr8:48407479-48407199 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:180
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-938
               
               
               Cow position:chr8:46816364-46816645 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:192
               
               
               Alignm E-value:4e-39
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr8:46815941-46816227 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):24, 69

               
               
               Conread position:657-940
               
               
               Cow position:chr8:46816280-46816563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:188
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):59, 67

               
               
               Conread position:657-940
               
               
               Cow position:chr8:46816868-46817151 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:197
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):91, 68

               
               
               Conread position:657-940
               
               
               Cow position:chr8:48407143-48406860 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:189
               
               
               Alignm E-value:3e-35
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr8:48407395-48407112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-27
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chr8:55581477-55581760 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:180
               
               
               Alignm E-value:2e-24
               
               
               Alignm gaps (pig, cow):163, 152

               
               
               Conread position:657-945
               
               
               Cow position:chr8:45201001-45201289 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:195
               
               
               Alignm E-value:3e-36
               
               
               Alignm gaps (pig, cow):20, 11

               
               
               Conread position:657-945
               
               
               Cow position:chr8:45201169-45201457 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:193
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr8:45201673-45201961 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:289
               
               
               Alignm identity:188
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-945
               
               
               Cow position:chr8:55581225-55581513 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:291
               
               
               Alignm identity:196
               
               
               Alignm E-value:8e-35
               
               
               Alignm gaps (pig, cow):66, 59

               
               
               Conread position:657-945
               
               
               Cow position:chr8:55581309-55581597 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:185
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):71, 60

               
               
               Conread position:658-940
               
               
               Cow position:chr8:45201338-45201620 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:185
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-936
               
               
               Cow position:chr8:45201591-45201868 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:197
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):141, 148

               
               
               Conread position:659-937
               
               
               Cow position:chr8:45201255-45201533 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:183
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):139, 148

               
               
               Conread position:659-937
               
               
               Cow position:chr8:45201507-45201785 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:194
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):140, 145

               
               
               Conread position:659-937
               
               
               Cow position:chr8:55581059-55581337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:279
               
               
               Alignm identity:195
               
               
               Alignm E-value:2.00386e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chr8:46816618-46816899 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:189
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):234, 252

               
               
               Conread position:659-940
               
               
               Cow position:chr8:46817038-46817319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:180
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):52, 48

               
               
               Conread position:659-945
               
               
               Cow position:chr8:45201423-45201709 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:198
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):141, 148

               
               
               Conread position:660-940
               
               
               Cow position:chr8:48406721-48406440 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:180
               
               
               Alignm E-value:1e-26
               
               
               Alignm gaps (pig, cow):25, 0

               
               
               Conread position:660-940
               
               
               Cow position:chr8:55580976-55581256 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:186
               
               
               Alignm E-value:7e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-944
               
               
               Cow position:chr8:6958009-6957727 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:179
               
               
               Alignm E-value:7e-23
               
               
               Alignm gaps (pig, cow):223, 234

               
               
               Conread position:664-935
               
               
               Cow position:chr8:46816035-46816306 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:272
               
               
               Alignm identity:189
               
               
               Alignm E-value:4.99997e-41
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:664-936
               
               
               Cow position:chr8:46816959-46817231 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:275
               
               
               Alignm identity:191
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):55, 50

               
               
               Conread position:671-937
               
               
               Cow position:chr8:46816798-46817064 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):44, 52

               
               
               Conread position:673-937
               
               
               Cow position:chr8:48407631-48407367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:265
               
               
               Alignm identity:173
               
               
               Alignm E-value:4e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:675-945
               
               
               Cow position:chr8:45200935-45201205 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:184
               
               
               Alignm E-value:6e-32
               
               
               Alignm gaps (pig, cow):87, 79

               
               
               Conread position:704-946
               
               
               Cow position:chr8:6958050-6957808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:245
               
               
               Alignm identity:165
               
               
               Alignm E-value:3e-27
               
               
               Alignm gaps (pig, cow):5, 15

               
               
               Conread position:656-948
               
               
               Cow position:chrX:25310124-25310416 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:294
               
               
               Alignm identity:202
               
               
               Alignm E-value:4.00001e-41
               
               
               Alignm gaps (pig, cow):144, 153

               
               
               Conread position:657-932
               
               
               Cow position:chrX:25324512-25324237 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:276
               
               
               Alignm identity:172
               
               
               Alignm E-value:5e-23
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-934
               
               
               Cow position:chrX:25324848-25324571 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:278
               
               
               Alignm identity:191
               
               
               Alignm E-value:4.00001e-40
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-936
               
               
               Cow position:chrX:25310041-25310320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:179
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):65, 71

               
               
               Conread position:657-936
               
               
               Cow position:chrX:25325016-25324737 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-34
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-937
               
               
               Cow position:chrX:25325268-25324988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:182
               
               
               Alignm E-value:4e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-937
               
               
               Cow position:chrX:25325520-25325240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:198
               
               
               Alignm E-value:9.99995e-41
               
               
               Alignm gaps (pig, cow):143, 150

               
               
               Conread position:657-938
               
               
               Cow position:chrX:25324932-25324651 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:182
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-939
               
               
               Cow position:chrX:29045193-29044911 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-33
               
               
               Alignm gaps (pig, cow):144, 150

               
               
               Conread position:657-940
               
               
               Cow position:chrX:25309873-25310156 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:285
               
               
               Alignm identity:188
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):138, 150

               
               
               Conread position:657-940
               
               
               Cow position:chrX:25309957-25310240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:188
               
               
               Alignm E-value:1e-29
               
               
               Alignm gaps (pig, cow):80, 56

               
               
               Conread position:657-940
               
               
               Cow position:chrX:25310293-25310576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:181
               
               
               Alignm E-value:9e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chrX:25324764-25324481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:181
               
               
               Alignm E-value:9e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chrX:25325184-25324901 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:284
               
               
               Alignm identity:186
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:657-940
               
               
               Cow position:chrX:25325688-25325405 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:191
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):70, 58

               
               
               Conread position:657-944
               
               
               Cow position:chrX:29044941-29044654 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:288
               
               
               Alignm identity:198
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-940
               
               
               Cow position:chrX:25309790-25310072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:190
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:658-940
               
               
               Cow position:chrX:25325435-25325153 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:197
               
               
               Alignm E-value:8e-37
               
               
               Alignm gaps (pig, cow):65, 57

               
               
               Conread position:659-938
               
               
               Cow position:chrX:29045758-29045479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:281
               
               
               Alignm identity:185
               
               
               Alignm E-value:4e-31
               
               
               Alignm gaps (pig, cow):142, 148

               
               
               Conread position:659-940
               
               
               Cow position:chrX:25310211-25310492 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:193
               
               
               Alignm E-value:9e-38
               
               
               Alignm gaps (pig, cow):148, 141

               
               
               Conread position:659-940
               
               
               Cow position:chrX:25324678-25324397 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:180
               
               
               Alignm E-value:9e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chrX:25325098-25324817 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:283
               
               
               Alignm identity:183
               
               
               Alignm E-value:3e-28
               
               
               Alignm gaps (pig, cow):57, 65

               
               
               Conread position:659-940
               
               
               Cow position:chrX:29045023-29044742 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:196
               
               
               Alignm E-value:5.00264e-43
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-940
               
               
               Cow position:chrX:29045107-29044826 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:189
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:659-946
               
               
               Cow position:chrX:12627340-12627626 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:290
               
               
               Alignm identity:194
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):54, 70

               
               
               Conread position:661-937
               
               
               Cow position:chrX:25325348-25325072 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:277
               
               
               Alignm identity:193
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:661-940
               
               
               Cow position:chrX:29045273-29044994 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:280
               
               
               Alignm identity:194
               
               
               Alignm E-value:3.99931e-42
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:670-940
               
               
               Cow position:chrX:29045831-29045561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:172
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-938
               
               
               Cow position:chrX:25324582-25324315 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:268
               
               
               Alignm identity:176
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:671-939
               
               
               Cow position:chrX:12627436-12627702 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:269
               
               
               Alignm identity:169
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):67, 0

               
               
               Conread position:671-940
               
               
               Cow position:chrX:12627770-12628039 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:270
               
               
               Alignm identity:174
               
               
               Alignm E-value:9e-28
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:672-938
               
               
               Cow position:chrX:25325589-25325323 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:177
               
               
               Alignm E-value:5e-32
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:685-940
               
               
               Cow position:chrX:25309733-25309988 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:256
               
               
               Alignm identity:170
               
               
               Alignm E-value:1e-30
               
               
               Alignm gaps (pig, cow):0, 0

               
               
               Conread position:737-940
               
               
               Cow position:chrX:25309701-25309904 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:204
               
               
               Alignm identity:142
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):0, 0
Conread position:	343-477
Cow position:	chr10:9028008-9028142 (view UCSC Genome Browser custom track)
Alignm length:	136
Alignm identity:	103
Alignm E-value:	7e-22
Alignm gaps (pig, cow):	79, 86
Conread position:	657-923
Cow position:	chr10:9031398-9031664 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	150
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	0, 0
Conread position:	657-928
Cow position:	chr10:9010339-9010068 (view UCSC Genome Browser custom track)
Alignm length:	273
Alignm identity:	176
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	249, 244
Conread position:	657-937
Cow position:	chr10:8996359-8996079 (view UCSC Genome Browser custom track)
Alignm length:	281
Alignm identity:	192
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	0, 0
Conread position:	657-939
Cow position:	chr10:8996779-8996497 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	202
Alignm E-value:	1.4013e-45
Alignm gaps (pig, cow):	70, 60
Conread position:	657-940
Cow position:	chr10:9010255-9009972 (view UCSC Genome Browser custom track)
Alignm length:	284
Alignm identity:	181
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	0, 0
Conread position:	657-945
Cow position:	chr10:9010507-9010219 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	195
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	60, 69
Conread position:	657-948
Cow position:	chr10:8996275-8995984 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	190
Alignm E-value:	2e-32
Alignm gaps (pig, cow):	0, 0
Conread position:	660-936
Cow position:	chr10:8996524-8996248 (view UCSC Genome Browser custom track)
Alignm length:	278
Alignm identity:	190
Alignm E-value:	4e-37
Alignm gaps (pig, cow):	70, 57
Conread position:	661-939
Cow position:	chr10:8996607-8996329 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	192
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	0, 0
Conread position:	670-936
Cow position:	chr10:8996430-8996164 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	185
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	0, 0
Conread position:	671-936
Cow position:	chr10:21939081-21938816 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	173
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	62, 67
Conread position:	671-940
Cow position:	chr10:8996849-8996580 (view UCSC Genome Browser custom track)
Alignm length:	272
Alignm identity:	187
Alignm E-value:	3e-35
Alignm gaps (pig, cow):	19, 11
Conread position:	704-936
Cow position:	chr10:21939132-21938900 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	153
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	23, 13
Conread position:	743-945
Cow position:	chr10:9031316-9031518 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	145
Alignm E-value:	7e-32
Alignm gaps (pig, cow):	0, 0
Conread position:	657-936
Cow position:	chr11:74554954-74554675 (view UCSC Genome Browser custom track)
Alignm length:	280
Alignm identity:	178
Alignm E-value:	1e-26
Alignm gaps (pig, cow):	0, 0
Conread position:	659-936
Cow position:	chr11:74554784-74554507 (view UCSC Genome Browser custom track)
Alignm length:	279
Alignm identity:	182
Alignm E-value:	6e-29
Alignm gaps (pig, cow):	65, 58
Conread position:	670-945
Cow position:	chr11:74554437-74554164 (view UCSC Genome Browser custom track)
Alignm length:	276
Alignm identity:	183
Alignm E-value:	8e-32
Alignm gaps (pig, cow):	263, 0
Conread position:	672-936
Cow position:	chr11:74555107-74554843 (view UCSC Genome Browser custom track)
Alignm length:	266
Alignm identity:	179
Alignm E-value:	3e-32
Alignm gaps (pig, cow):	68, 78
Conread position:	729-945
Cow position:	chr11:74554630-74554414 (view UCSC Genome Browser custom track)
Alignm length:	217
Alignm identity:	151
Alignm E-value:	7e-31
Alignm gaps (pig, cow):	0, 0