Cow genome map
| Conread name: | Ss1.1-Pig4-TMW8055E22.5 |
| Conread position: | 754-964 |
| Cow position: | chr10:57452168-57451953 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 185 |
| Conread position: | 768-967 |
| Cow position: | chr10:58663926-58664129 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 171 |
| Conread position: | 814-967 |
| Cow position: | chr10:14835400-14835553 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 81, 88 |
| Conread position: | 768-923 |
| Cow position: | chr11:54795407-54795259 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 769-967 |
| Cow position: | chr11:59883280-59883481 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 21, 50 |
| Conread position: | 773-964 |
| Cow position: | chr11:3892280-3892090 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 127, 52 |
| Conread position: | 792-967 |
| Cow position: | chr11:2910080-2909903 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 810-967 |
| Cow position: | chr11:17324127-17324276 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 769-961 |
| Cow position: | chr12:12260482-12260671 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 138, 118 |
| Conread position: | 753-980 |
| Cow position: | chr13:34966078-34966311 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 17, 209 |
| Conread position: | 768-943 |
| Cow position: | chr13:57481027-57480843 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 806-953 |
| Cow position: | chr15:47198467-47198321 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 110 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 804-963 |
| Cow position: | chr16:55258770-55258928 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 144, 0 |
| Conread position: | 769-968 |
| Cow position: | chr19:2705017-2704815 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 777-956 |
| Cow position: | chr21:37308839-37308661 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 96, 20 |
| Conread position: | 797-967 |
| Cow position: | chr22:41168543-41168707 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 769-942 |
| Cow position: | chr23:35290970-35291144 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 772-961 |
| Cow position: | chr23:34415743-34415932 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 794-943 |
| Cow position: | chr23:12265287-12265435 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 794-943 |
| Cow position: | chr23:28661283-28661432 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 769-963 |
| Cow position: | chr24:23752762-23752566 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 769-968 |
| Cow position: | chr27:28089626-28089832 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 21, 188 |
| Conread position: | 793-967 |
| Cow position: | chr27:12194748-12194921 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 63, 79 |
| Conread position: | 820-965 |
| Cow position: | chr28:33230819-33230674 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 136 |
| Conread position: | 1-433 |
| Cow position: | chr7:5829414-5828982 (view UCSC Genome Browser custom track) |
| Alignm length: | 436 |
| Alignm identity: | 398 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 21 |
| Conread position: | 433-506 |
| Cow position: | chr7:5828578-5828505 (view UCSC Genome Browser custom track) |
| Alignm length: | 74 |
| Alignm identity: | 71 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 503-644 |
| Cow position: | chr7:5826224-5826083 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 629-769 |
| Cow position: | chr7:5788775-5788635 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 125 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 768-967 |
| Cow position: | chr7:19179426-19179226 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 33, 170 |
| Conread position: | 785-975 |
| Cow position: | chr7:5785294-5785104 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 818-943 |
| Cow position: | chr7:3487929-3487804 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 773-943 |
| Cow position: | chr9:53782547-53782721 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 63 |
| Conread position: | 811-942 |
| Cow position: | chr9:22702635-22702506 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 85 |
| Conread position: | 768-948 |
| Cow position: | chrX:24772257-24772072 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 769-967 |
| Cow position: | chrX:23420654-23420454 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 24, 66 |
| Conread position: | 772-949 |
| Cow position: | chrX:19610319-19610141 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 35, 100 |
| Conread position: | 776-967 |
| Cow position: | chrX:17616217-17616025 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 14, 123 |
| Conread position: | 792-988 |
| Cow position: | chrX:27715892-27716087 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 38, 139 |
| Conread position: | 794-968 |
| Cow position: | chrX:3576736-3576908 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 172, 96 |