Cow genome map

Conread name: Ss1.1-Spl1-SPL010013G11.5.5

Conread position: 150-325
Cow position: chr10:37648669-37648493 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 82, 97

Conread position: 130-304
Cow position: chr11:58770393-58770566 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 71, 103

Conread position: 130-319
Cow position: chr11:59059905-59060097 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 136
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 62, 130

Conread position: 130-402
Cow position: chr11:20714098-20714364 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 203
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 175, 67

Conread position: 131-324
Cow position: chr11:24939163-24938967 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 136

Conread position: 132-308
Cow position: chr11:457599-457773 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 118

Conread position: 146-325
Cow position: chr11:45805426-45805603 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 50, 99

Conread position: 132-311
Cow position: chr12:28417474-28417655 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 128
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 128

Conread position: 132-325
Cow position: chr12:20340497-20340686 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 139
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 100

Conread position: 132-311
Cow position: chr13:47682797-47682619 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 134
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 11

Conread position: 132-403
Cow position: chr13:50581685-50581968 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 202
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 81, 127

Conread position: 132-403
Cow position: chr14:21025528-21025267 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 186
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 97, 73

Conread position: 146-325
Cow position: chr14:40830044-40829873 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 132
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 25

Conread position: 130-325
Cow position: chr15:31150929-31150734 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 10

Conread position: 130-334
Cow position: chr15:31174082-31173880 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 142
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 83, 62

Conread position: 132-325
Cow position: chr15:33722638-33722443 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 28, 128

Conread position: 132-359
Cow position: chr15:31161583-31161358 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 157
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 81, 39

Conread position: 130-324
Cow position: chr16:28161352-28161160 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 83, 114

Conread position: 130-325
Cow position: chr16:10449577-10449382 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 76, 129

Conread position: 130-325
Cow position: chr16:47852148-47851952 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 143
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 34

Conread position: 132-343
Cow position: chr16:44405098-44404876 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 157
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 66, 39

Conread position: 132-343
Cow position: chr16:44456673-44456454 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 66, 39

Conread position: 132-403
Cow position: chr16:13828979-13828711 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 191
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 161, 67

Conread position: 130-325
Cow position: chr17:28583321-28583518 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 150
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 36, 130

Conread position: 130-402
Cow position: chr17:12446155-12445868 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 200
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 36, 44

Conread position: 130-325
Cow position: chr18:30722948-30722752 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 61, 128

Conread position: 132-325
Cow position: chr18:13862629-13862438 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 145
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 66, 0

Conread position: 132-402
Cow position: chr18:8336479-8336750 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 72, 125

Conread position: 132-406
Cow position: chr18:25817487-25817195 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 213
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 69, 16

Conread position: 132-325
Cow position: chr19:13460588-13460398 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 75, 116

Conread position: 130-403
Cow position: chr2:49856247-49856537 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 203
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 76

Conread position: 132-394
Cow position: chr2:16817069-16817332 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 223

Conread position: 132-403
Cow position: chr2:13125485-13125776 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 39

Conread position: 133-341
Cow position: chr2:74251808-74252024 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 80, 118

Conread position: 146-325
Cow position: chr2:70155881-70156056 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 36

Conread position: 405-547
Cow position: chr2:16820504-16820646 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 125
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 546-658
Cow position: chr2:16832380-16832492 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 101
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 637-1035
Cow position: chr2:16842837-16843237 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 379

Conread position: 131-343
Cow position: chr20:4656217-4656001 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 98

Conread position: 132-403
Cow position: chr20:33666723-33667011 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 201
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 21

Conread position: 130-325
Cow position: chr21:11516767-11516579 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 70, 0

Conread position: 130-325
Cow position: chr21:34577272-34577078 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 148
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 79, 127

Conread position: 161-300
Cow position: chr21:26225599-26225742 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 46, 117

Conread position: 132-403
Cow position: chr22:38128764-38129045 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 201
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 20

Conread position: 130-270
Cow position: chr23:36335412-36335274 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 93

Conread position: 130-402
Cow position: chr24:9837998-9837706 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 199
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 70, 118

Conread position: 130-403
Cow position: chr24:16135596-16135890 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 212
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 82, 109

Conread position: 132-403
Cow position: chr24:12432511-12432787 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 192
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 114

Conread position: 132-403
Cow position: chr24:22718858-22719156 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 208
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 131

Conread position: 131-325
Cow position: chr25:27029548-27029743 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 145
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 58, 128

Conread position: 132-312
Cow position: chr25:9344113-9344290 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 113

Conread position: 134-393
Cow position: chr26:12929211-12929469 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 205, 25

Conread position: 132-325
Cow position: chr28:8401471-8401662 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 64

Conread position: 155-343
Cow position: chr28:19281497-19281683 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 61, 9

Conread position: 130-325
Cow position: chr3:55992666-55992858 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 143
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 83, 114

Conread position: 130-406
Cow position: chr3:25167307-25167591 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 206
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 83, 54

Conread position: 132-316
Cow position: chr3:48371592-48371416 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 131
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 132-403
Cow position: chr3:42567614-42567331 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 205
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 81, 57

Conread position: 134-403
Cow position: chr3:49356507-49356230 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 199
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 82, 125

Conread position: 136-305
Cow position: chr3:67655784-67655955 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 77, 121

Conread position: 142-403
Cow position: chr3:42471571-42471300 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 190
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 64, 118

Conread position: 146-361
Cow position: chr3:16132734-16132944 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 159
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 51

Conread position: 150-312
Cow position: chr3:14928340-14928179 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 63, 47

Conread position: 201-403
Cow position: chr3:21941223-21941013 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 153
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 25, 60

Conread position: 132-325
Cow position: chr4:39519144-39519336 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 75, 60

Conread position: 132-325
Cow position: chr4:48994954-48994769 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 67, 0

Conread position: 132-403
Cow position: chr4:40411187-40411465 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 198
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 77, 47

Conread position: 133-403
Cow position: chr4:47715600-47715858 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 80, 34

Conread position: 130-402
Cow position: chr5:30010446-30010172 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 190
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 68, 127

Conread position: 130-403
Cow position: chr5:2492874-2492608 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 188
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 83, 29

Conread position: 131-403
Cow position: chr5:75711409-75711703 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 207
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 66, 26

Conread position: 136-403
Cow position: chr5:38154775-38155041 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 188
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 200, 71

Conread position: 122-325
Cow position: chr6:17825758-17825959 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 42

Conread position: 131-325
Cow position: chr6:6353996-6354191 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 147
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 84

Conread position: 132-403
Cow position: chr6:33798412-33798692 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 203
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 81, 66

Conread position: 133-403
Cow position: chr6:854625-854339 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 203
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 41, 94

Conread position: 132-325
Cow position: chr7:4910037-4910234 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 147
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 80, 125

Conread position: 132-325
Cow position: chr7:61549042-61548849 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 143
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 83, 182

Conread position: 132-403
Cow position: chr7:42090714-42090448 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 181
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 101, 49

Conread position: 134-325
Cow position: chr7:59087795-59087986 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 148
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 40, 124

Conread position: 132-325
Cow position: chr8:26220299-26220492 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 66, 96

Conread position: 132-325
Cow position: chr8:57262243-57262430 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 135
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 132-326
Cow position: chr8:49950269-49950460 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 144
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 98, 125

Conread position: 132-361
Cow position: chr8:46505186-46505416 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 85, 115

Conread position: 143-403
Cow position: chr8:11045355-11045631 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 193
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 112

Conread position: 132-403
Cow position: chr9:44342003-44342295 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 206
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 83, 126

Conread position: 132-407
Cow position: chr9:17558241-17557965 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 206
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 76, 28

Conread position: 133-325
Cow position: chr9:36852149-36851960 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 141
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 107

Conread position: 134-403
Cow position: chrX:21571216-21571507 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 206
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 64, 111

Conread position: 146-395
Cow position: chrX:33883968-33883709 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 182
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 192, 110