Cow genome map
| Conread name: | Ss1.1-Tra1-TCH01H080027.5 |
| Conread position: | 2-153 |
| Cow position: | chr1:24539795-24539641 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 33, 11 |
| Conread position: | 1-178 |
| Cow position: | chr11:34281591-34281410 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 29, 147 |
| Conread position: | 2-180 |
| Cow position: | chr11:29292289-29292101 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 1-149 |
| Cow position: | chr13:29134064-29133915 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 35, 58 |
| Conread position: | 6-134 |
| Cow position: | chr13:30957871-30957745 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 56, 98 |
| Conread position: | 1047-1149 |
| Cow position: | chr13:41861311-41861209 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1146-1298 |
| Cow position: | chr13:41860475-41860323 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 144 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1291-1386 |
| Cow position: | chr13:41859137-41859040 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 1382-1668 |
| Cow position: | chr13:41857030-41856744 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 270, 150 |
| Conread position: | 2-135 |
| Cow position: | chr15:12747592-12747460 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 49, 59 |
| Conread position: | 428-538 |
| Cow position: | chr18:22988714-22988604 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 91 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 834-946 |
| Cow position: | chr18:22964557-22964445 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 945-1048 |
| Cow position: | chr18:22964169-22964066 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 90 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1147-1298 |
| Cow position: | chr18:22962335-22962184 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-131 |
| Cow position: | chr2:68387325-68387193 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 101 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 2-146 |
| Cow position: | chr22:24613732-24613584 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 32-169 |
| Cow position: | chr28:24208012-24207878 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 19-130 |
| Cow position: | chr4:50994533-50994645 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 90 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 22-180 |
| Cow position: | chr5:25456320-25456466 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 441-737 |
| Cow position: | chr5:59091266-59090969 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 254 |
| Conread position: | 746-1026 |
| Cow position: | chr5:59090935-59090654 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 37 |
| Conread position: | 1019-1278 |
| Cow position: | chr5:59090437-59090179 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 180, 131 |
| Conread position: | 5-135 |
| Cow position: | chrX:26289500-26289370 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |