Cow genome map


           Conread name:
           Ss1.1-nep34c_n6.5
        

               Conread position:
               1002-1140
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               102
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1-260
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               63, 117
               

               Conread position:
               1-261
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               212
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               3-260
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               15-260
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 59
               

               Conread position:
               18-260
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               22-273
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               25-260
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               108-260
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               108-260
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               113
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               108-261
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-258
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-258
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-265
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               109-270
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               218-460
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               35, 26
               

               Conread position:
               238-472
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               152, 144
               

               Conread position:
               254-472
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               63, 69
               

               Conread position:
               254-472
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               127, 135
               

               Conread position:
               254-472
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               136, 128
               

               Conread position:
               254-472
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               125, 135
               

               Conread position:
               254-473
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               254-475
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               134, 118
               

               Conread position:
               254-479
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               136, 128
               

               Conread position:
               254-479
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               63, 79
               

               Conread position:
               254-483
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               125, 134
               

               Conread position:
               530-628
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               82
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               599-792
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               31, 16
               

               Conread position:
               605-792
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               150
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               608-792
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               169
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               614-792
               

               Cow position:
               
               

               Alignm length:
               180
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               138
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               139
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               135
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-792
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               136
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-805
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               628-808
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-36
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               628-811
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               166, 0
               

               Conread position:
               636-792
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               638-802
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               156, 0
               

               Conread position:
               668-792
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               791-918
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               119
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               916-1140
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               916-1140
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               171
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 25
               

               Conread position:
               925-1140
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               164
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               929-1140
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               155
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               929-1140
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               171
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               929-1140
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               929-1140
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               163
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               929-1140
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               929-1140
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               161
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               940-1140
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               945-1140
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               945-1140
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               945-1151
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               161
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               197, 0
               

               Conread position:
               946-1133
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               946-1140
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               946-1140
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               155
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               946-1140
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               946-1140
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               946-1140
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               165
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               946-1148
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               946-1149
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               159
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               946-1167
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               79, 73
               

               Conread position:
               949-1122
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               127
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               92, 115
               

               Conread position:
               949-1133
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               949-1133
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               150
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               949-1133
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               146
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               949-1133
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               949-1157
               

               Cow position:
               
               

               Alignm length:
               209
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               185, 0
               

               Conread position:
               982-1140
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1002-1154
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               1175-2005
               

               Cow position:
               
               

               Alignm length:
               839
               

               Alignm identity:
               669
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 120