Cow genome map
| Conread name: | Ss1.1-recc2828c_l21.5 |
| Conread position: | 11-203 |
| Cow position: | chr1:90247804-90247990 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 1-179 |
| Cow position: | chr10:16093629-16093807 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 161 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-179 |
| Cow position: | chr10:52889334-52889512 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-179 |
| Cow position: | chr11:29800951-29801129 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-179 |
| Cow position: | chr11:32100353-32100531 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 155 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-180 |
| Cow position: | chr11:17224698-17224519 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 2-148 |
| Cow position: | chr12:42176164-42176309 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 1-342 |
| Cow position: | chr13:30517029-30517373 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 252 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 248, 49 |
| Conread position: | 10-177 |
| Cow position: | chr13:6601016-6601182 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 22-203 |
| Cow position: | chr13:47248442-47248262 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 159 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 163, 0 |
| Conread position: | 13-260 |
| Cow position: | chr14:41871014-41871258 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 89 |
| Conread position: | 1-203 |
| Cow position: | chr15:8752153-8752351 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 2-216 |
| Cow position: | chr16:42031042-42030834 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 18-342 |
| Cow position: | chr16:37718192-37718524 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 168 |
| Conread position: | 1-344 |
| Cow position: | chr17:45580509-45580166 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 183 |
| Conread position: | 2-214 |
| Cow position: | chr17:36633973-36633768 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 1-181 |
| Cow position: | chr19:37643434-37643613 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 152 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 0 |
| Conread position: | 2-311 |
| Cow position: | chr19:31270903-31271211 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 223 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 234, 109 |
| Conread position: | 1-131 |
| Cow position: | chr2:40225538-40225667 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-177 |
| Cow position: | chr2:6179400-6179225 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 1-215 |
| Cow position: | chr2:72488207-72488415 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 174 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 1-216 |
| Cow position: | chr2:59510888-59511094 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 169 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 1-247 |
| Cow position: | chr2:76351310-76351554 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 200 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 233, 182 |
| Conread position: | 1-249 |
| Cow position: | chr2:40228143-40228383 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 179, 29 |
| Conread position: | 22-173 |
| Cow position: | chr2:18052777-18052930 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 132 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 3-181 |
| Cow position: | chr21:22723864-22723687 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 0 |
| Conread position: | 17-344 |
| Cow position: | chr21:34624469-34624135 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 167 |
| Conread position: | 1-206 |
| Cow position: | chr22:39311368-39311572 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 170 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 0 |
| Conread position: | 1-216 |
| Cow position: | chr22:36443526-36443315 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 18 |
| Conread position: | 1-345 |
| Cow position: | chr25:28981855-28982207 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 186 |
| Conread position: | 3-263 |
| Cow position: | chr26:32508453-32508196 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 246, 182 |
| Conread position: | 1-344 |
| Cow position: | chr28:11240569-11240225 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 172 |
| Conread position: | 32-344 |
| Cow position: | chr28:1297315-1297624 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 62, 151 |
| Conread position: | 1-182 |
| Cow position: | chr3:407975-407795 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 1-186 |
| Cow position: | chr3:85349029-85348844 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 149 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 183, 177 |
| Conread position: | 1-179 |
| Cow position: | chr6:1640323-1640501 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |