Cow genome map


           Conread name:
           Ss1.1-reep02c_e6.5.5
        

               Conread position:
               221-564
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               247
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               75, 141
               

               Conread position:
               233-498
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               234-504
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 123
               

               Conread position:
               245-507
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               33, 23
               

               Conread position:
               368-504
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               371-504
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               119
               

               Alignm E-value:
               8e-40
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               371-504
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               373-467
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               373-574
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               181, 147
               

               Conread position:
               645-818
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               149
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               653-815
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               654-818
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               149
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-822
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               82, 94
               

               Conread position:
               658-815
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               659-815
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               132
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               813-966
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               17, 32
               

               Conread position:
               843-966
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1294
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1311
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1311
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1316
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               36, 43
               

               Conread position:
               1112-1317
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1324
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1124-1312
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               3-368
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 330
               

               Conread position:
               139-574
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 13
               

               Conread position:
               221-515
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               205
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               41, 110
               

               Conread position:
               231-574
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               245-574
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 60
               

               Conread position:
               263-574
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-574
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 59
               

               Conread position:
               304-574
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 70
               

               Conread position:
               340-587
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               22, 173
               

               Conread position:
               370-589
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               191
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               371-581
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               152
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               12, 147
               

               Conread position:
               371-581
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               12, 147
               

               Conread position:
               371-581
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 147
               

               Conread position:
               371-581
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 147
               

               Conread position:
               371-587
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               139, 0
               

               Conread position:
               573-660
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               80
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               647-843
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               191, 184
               

               Conread position:
               655-815
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               141
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-818
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               139
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-818
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               139
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-818
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-818
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-818
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-818
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-818
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-821
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               153
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               655-823
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               140
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-815
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               136
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-815
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               658-818
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               663-820
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               74, 79
               

               Conread position:
               808-976
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               813-976
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               27, 37
               

               Conread position:
               813-976
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               813-976
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               150
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               813-976
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               143
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               813-983
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               132
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               813-1000
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               835-976
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               966-1109
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               105
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               975-1102
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               975-1102
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               121
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               975-1102
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               975-1102
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               975-1114
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               975-1127
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               983-1102
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1102-1311
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1102-1321
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1102-1321
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               175
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1102-1321
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 52
               

               Conread position:
               1102-1321
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               173
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1102-1322
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               202
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1102-1324
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1102-1369
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               195
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               116, 112
               

               Conread position:
               1112-1318
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1318
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               147
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1318
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1318
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1318
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1112-1322
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1113-1318
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1124-1330
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               196, 0
               

               Conread position:
               1348-1722
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 259
               

               Conread position:
               658-815
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               93, 89
               

               Conread position:
               1102-1308
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               542-816
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               88, 182
               

               Conread position:
               1041-1308
               

               Cow position:
               
               

               Alignm length:
               269
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               177, 24