Cow genome map
| Conread name: | Ss1.1-rjej31b_f4.5 |
| Conread position: | 303-472 |
| Cow position: | chr13:46206184-46206353 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-569 |
| Cow position: | chr15:19143631-19143365 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 115 |
| Conread position: | 290-547 |
| Cow position: | chr18:56413583-56413838 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 41, 15 |
| Conread position: | 330-568 |
| Cow position: | chr18:56398580-56398341 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 223, 215 |
| Conread position: | 349-544 |
| Cow position: | chr18:56272259-56272064 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 163, 173 |
| Conread position: | 351-538 |
| Cow position: | chr18:55576866-55576679 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 125, 135 |
| Conread position: | 240-571 |
| Cow position: | chr19:14951360-14951028 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 225 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 303-544 |
| Cow position: | chr19:23639991-23640232 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-573 |
| Cow position: | chr21:34231122-34230852 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 255, 262 |
| Conread position: | 1-108 |
| Cow position: | chr22:12448158-12448056 (view UCSC Genome Browser custom track) |
| Alignm length: | 109 |
| Alignm identity: | 91 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 102, 18 |
| Conread position: | 111-580 |
| Cow position: | chr22:12443373-12442904 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 431 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 272-572 |
| Cow position: | chr22:12485127-12484827 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-562 |
| Cow position: | chr22:12537799-12538059 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 579-696 |
| Cow position: | chr22:12441714-12441597 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 227-529 |
| Cow position: | chr23:25691665-25691357 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 278 |
| Conread position: | 237-568 |
| Cow position: | chr23:24648116-24648447 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 241-574 |
| Cow position: | chr23:24622848-24623181 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 41, 64 |
| Conread position: | 244-556 |
| Cow position: | chr23:24527439-24527127 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 33, 6 |
| Conread position: | 244-570 |
| Cow position: | chr23:25658174-25658499 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 301-572 |
| Cow position: | chr23:25617606-25617877 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-552 |
| Cow position: | chr23:25730705-25730456 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 311-544 |
| Cow position: | chr23:24568082-24567849 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 321-573 |
| Cow position: | chr23:25703102-25702850 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 193, 185 |
| Conread position: | 321-580 |
| Cow position: | chr23:24538680-24538421 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 301-580 |
| Cow position: | chr24:17062913-17063192 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 202 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 200 |
| Conread position: | 302-573 |
| Cow position: | chr24:17010413-17010684 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 195, 199 |
| Conread position: | 314-571 |
| Cow position: | chr24:17081822-17081565 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 186 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 362-565 |
| Cow position: | chr24:16984942-16985138 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 225-567 |
| Cow position: | chr25:34745174-34744835 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 275, 30 |
| Conread position: | 261-569 |
| Cow position: | chr25:421905-422211 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 17, 25 |
| Conread position: | 293-573 |
| Cow position: | chr25:22223918-22224198 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 194 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 186, 181 |
| Conread position: | 302-562 |
| Cow position: | chr25:34467685-34467948 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 247, 0 |
| Conread position: | 302-573 |
| Cow position: | chr25:33142815-33143086 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-580 |
| Cow position: | chr25:321853-322131 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-478 |
| Cow position: | chr25:361390-361565 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 65, 69 |
| Conread position: | 303-551 |
| Cow position: | chr25:33122297-33122545 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 303-556 |
| Cow position: | chr25:339490-339743 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 62, 69 |
| Conread position: | 303-570 |
| Cow position: | chr25:4663665-4663399 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 0 |
| Conread position: | 311-553 |
| Cow position: | chr25:3673404-3673646 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 161, 178 |
| Conread position: | 312-552 |
| Cow position: | chr25:3639855-3639615 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 34, 43 |
| Conread position: | 318-568 |
| Cow position: | chr25:34751283-34751534 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 240, 0 |
| Conread position: | 303-568 |
| Cow position: | chr7:27245087-27244822 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 349-544 |
| Cow position: | chr8:55569562-55569757 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 153, 146 |