Cow genome map
| Conread name: | Ss1.1-rlin19_p1.5 |
| Conread position: | 90-347 |
| Cow position: | chr10:7858503-7858248 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 170 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 19, 24 |
| Conread position: | 27-346 |
| Cow position: | chr11:84740473-84740796 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 15, 204 |
| Conread position: | 19-344 |
| Cow position: | chr13:30274967-30274640 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 218 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 24, 9 |
| Conread position: | 63-347 |
| Cow position: | chr14:12802220-12801939 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 69, 10 |
| Conread position: | 59-360 |
| Cow position: | chr15:40647046-40646745 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 191 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 154 |
| Conread position: | 63-361 |
| Cow position: | chr16:16220422-16220723 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 204 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 68-341 |
| Cow position: | chr16:15538485-15538760 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 20 |
| Conread position: | 68-348 |
| Cow position: | chr16:30696507-30696231 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 69, 16 |
| Conread position: | 68-350 |
| Cow position: | chr16:8804388-8804668 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 55, 47 |
| Conread position: | 34-307 |
| Cow position: | chr18:51031376-51031108 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 52, 16 |
| Conread position: | 35-346 |
| Cow position: | chr18:25960676-25960368 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 207 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 15, 33 |
| Conread position: | 59-358 |
| Cow position: | chr18:23072258-23071967 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 179, 70 |
| Conread position: | 64-347 |
| Cow position: | chr18:14423087-14423370 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 79, 91 |
| Conread position: | 64-369 |
| Cow position: | chr18:2286012-2286322 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 209 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 43, 105 |
| Conread position: | 14-359 |
| Cow position: | chr20:30187574-30187920 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 217 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 58 |
| Conread position: | 63-359 |
| Cow position: | chr21:38804938-38804648 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 63-360 |
| Cow position: | chr21:30872646-30872940 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 195 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 81, 157 |
| Conread position: | 64-359 |
| Cow position: | chr21:47972238-47971951 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 65 |
| Conread position: | 64-367 |
| Cow position: | chr23:3146653-3146955 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 199 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 64, 109 |
| Conread position: | 68-344 |
| Cow position: | chr25:35931524-35931247 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 106 |
| Conread position: | 59-327 |
| Cow position: | chr26:25222443-25222169 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 80, 55 |
| Conread position: | 68-360 |
| Cow position: | chr26:19489982-19490275 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 69, 163 |
| Conread position: | 68-349 |
| Cow position: | chr27:29006081-29006369 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 69, 106 |
| Conread position: | 71-342 |
| Cow position: | chr29:43303350-43303625 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 1-464 |
| Cow position: | chr4:40279772-40279323 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 49, 44 |
| Conread position: | 556-1355 |
| Cow position: | chr4:40276039-40275231 (view UCSC Genome Browser custom track) |
| Alignm length: | 827 |
| Alignm identity: | 635 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 79 |
| Conread position: | 68-347 |
| Cow position: | chr5:68484980-68485258 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 69, 169 |
| Conread position: | 63-344 |
| Cow position: | chr6:42033279-42033557 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 160, 85 |
| Conread position: | 68-344 |
| Cow position: | chr6:7941087-7940813 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 61, 151 |
| Conread position: | 6-362 |
| Cow position: | chr7:61005432-61005793 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 41 |
| Conread position: | 64-344 |
| Cow position: | chr7:59085714-59085991 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 166 |
| Conread position: | 66-371 |
| Cow position: | chr7:21098503-21098204 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 202, 152 |
| Conread position: | 74-347 |
| Cow position: | chr7:41324393-41324127 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 55, 144 |
| Conread position: | 64-347 |
| Cow position: | chr8:8103328-8103052 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 73, 101 |
| Conread position: | 68-347 |
| Cow position: | chr8:41746575-41746301 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 184 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 240, 50 |
| Conread position: | 69-348 |
| Cow position: | chr8:39460601-39460876 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 70, 60 |
| Conread position: | 10-359 |
| Cow position: | chr9:8462636-8462284 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 224 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 23, 224 |
| Conread position: | 89-354 |
| Cow position: | chr9:12161257-12161523 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 50, 66 |
| Conread position: | 8-344 |
| Cow position: | chrX:23327332-23326990 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 20, 101 |
| Conread position: | 68-360 |
| Cow position: | chrX:36908422-36908135 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 60, 126 |
| Conread position: | 112-344 |
| Cow position: | chrX:10410485-10410254 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 126, 81 |