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Cow genome map

           
Conread name:
           
Ss1.1-rlnt23c_n4.5
        

               
Conread position:
               
1-242
               

               
Cow position:
               
chr1:1999646-1999405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr1:1999898-1999428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
2-326
               

               
Cow position:
               
chr1:1999729-1999405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
69, 39
               

               
Conread position:
               
5-393
               

               
Cow position:
               
chr1:1999810-1999422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
152, 139
               

               
Conread position:
               
5-461
               

               
Cow position:
               
chr1:2000230-1999774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 115
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr1:1999978-1999491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 307
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr1:2000062-1999575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
113, 105
               

               
Conread position:
               
9-478
               

               
Cow position:
               
chr1:2000142-1999673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 96
               

               
Conread position:
               
61-492
               

               
Cow position:
               
chr1:2000258-1999827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr10:8996658-8996166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
2-447
               

               
Cow position:
               
chr10:8996489-8996044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
118, 110
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr10:8996741-8996251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
119, 111
               

               
Conread position:
               
43-493
               

               
Cow position:
               
chr10:8996784-8996334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
402, 392
               

               
Conread position:
               
56-429
               

               
Cow position:
               
chr10:9010499-9010126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
133, 142
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr11:50368586-50368252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 108
               

               
Conread position:
               
1-468
               

               
Cow position:
               
chr11:74554833-74554366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr11:74554749-74554268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
269, 262
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr11:74555085-74554594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr11:74554664-74554256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr11:74555000-74554510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
95, 99
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr11:74554916-74554425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr11:74554577-74554227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
85-399
               

               
Cow position:
               
chr11:50368586-50368273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 188
               

               
Conread position:
               
160-514
               

               
Cow position:
               
chr11:50368595-50368239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr13:22125284-22125722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
207, 212
               

               
Conread position:
               
1-439
               

               
Cow position:
               
chr13:24163010-24163448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
207, 212
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr13:24162842-24163333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr13:22124949-22125386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr13:24162675-24163112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
2-446
               

               
Cow position:
               
chr13:22125453-22125897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
294, 263
               

               
Conread position:
               
2-446
               

               
Cow position:
               
chr13:24163179-24163623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
127, 120
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr13:22125033-22125523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr13:22125201-22125691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
122, 127
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr13:24162759-24163249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 30
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr13:39930584-39931074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr13:22124865-22125356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 122
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr13:24162591-24163082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 203
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr13:39930668-39931157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 16
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr13:22124697-22125198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr13:24162423-24162924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
4-493
               

               
Cow position:
               
chr13:22124783-22125272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 41
               

               
Conread position:
               
4-493
               

               
Cow position:
               
chr13:24162509-24162998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
13-492
               

               
Cow position:
               
chr13:22125128-22125607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
16-492
               

               
Cow position:
               
chr13:24162941-24163417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 113
               

               
Conread position:
               
43-469
               

               
Cow position:
               
chr13:22125410-22125836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
302, 310
               

               
Conread position:
               
43-469
               

               
Cow position:
               
chr13:24163136-24163562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
302, 310
               

               
Conread position:
               
162-492
               

               
Cow position:
               
chr13:24162415-24162745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
166-492
               

               
Cow position:
               
chr13:39930580-39930906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
126, 131
               

               
Conread position:
               
1-299
               

               
Cow position:
               
chr14:3060963-3060665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-319
               

               
Cow position:
               
chr14:3155515-3155833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
119, 110
               

               
Conread position:
               
1-387
               

               
Cow position:
               
chr14:447863-448249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
364, 371
               

               
Conread position:
               
1-413
               

               
Cow position:
               
chr14:680833-681245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr14:3080488-3080007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 360
               

               
Conread position:
               
1-486
               

               
Cow position:
               
chr14:680581-681066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 109
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr14:680749-681235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-487
               

               
Cow position:
               
chr14:3127916-3127432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
1-490
               

               
Cow position:
               
chr14:433916-434405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 24
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr14:680329-680820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr14:3061215-3060724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 287
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr14:3061467-3060976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 209
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr14:3061551-3061060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 206
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr14:3080908-3080417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr14:3080992-3080500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
1-506
               

               
Cow position:
               
chr14:3061383-3060878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
1-516
               

               
Cow position:
               
chr14:3080152-3079636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
2-271
               

               
Cow position:
               
chr14:663380-663111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
120, 124
               

               
Conread position:
               
2-312
               

               
Cow position:
               
chr14:3156173-3156483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-328
               

               
Cow position:
               
chr14:3100730-3100404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
188, 201
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr14:3156089-3156481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
2-407
               

               
Cow position:
               
chr14:3155432-3155837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
394, 399
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr14:3127747-3127271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
92, 99
               

               
Conread position:
               
2-480
               

               
Cow position:
               
chr14:3061130-3060652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 195
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:447696-448186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:680666-681156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 24
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:3061718-3061228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 196
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:3080403-3079913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:3080571-3080081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:3127999-3127509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
105, 118
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:3155921-3156411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
118, 92
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:25895137-25895627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 124
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:25895221-25895711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 43
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr14:25895473-25895963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
36, 43
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr14:3080823-3080332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr14:3127831-3127340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
2-494
               

               
Cow position:
               
chr14:447780-448273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 37
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr14:447612-448115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr14:3080739-3080236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
2-505
               

               
Cow position:
               
chr14:680498-680999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
3-501
               

               
Cow position:
               
chr14:680415-680914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 23
               

               
Conread position:
               
4-355
               

               
Cow position:
               
chr14:663462-663111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
98, 93
               

               
Conread position:
               
4-363
               

               
Cow position:
               
chr14:25895979-25896338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
280, 292
               

               
Conread position:
               
4-479
               

               
Cow position:
               
chr14:25895811-25896286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
42, 23
               

               
Conread position:
               
4-491
               

               
Cow position:
               
chr14:25895055-25895542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 209
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr14:3061632-3061144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
294, 287
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr14:3080317-3079829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 22
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr14:25836745-25837095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
32, 38
               

               
Conread position:
               
5-429
               

               
Cow position:
               
chr14:25895728-25896152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
33, 40
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr14:433836-434323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 102
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr14:3080232-3079745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 104
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr14:3080652-3080165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr14:3128164-3127677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 108
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr14:25894972-25895459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 19
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr14:25895392-25895879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 16
               

               
Conread position:
               
5-493
               

               
Cow position:
               
chr14:25895560-25896048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
185, 195
               

               
Conread position:
               
22-492
               

               
Cow position:
               
chr14:3061780-3061312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 11
               

               
Conread position:
               
40-492
               

               
Cow position:
               
chr14:3100942-3100492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
42-492
               

               
Cow position:
               
chr14:447568-448018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
44-492
               

               
Cow position:
               
chr14:25895347-25895795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
413, 420
               

               
Conread position:
               
56-402
               

               
Cow position:
               
chr14:3127609-3127263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
133, 142
               

               
Conread position:
               
56-479
               

               
Cow position:
               
chr14:3156059-3156482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
56-493
               

               
Cow position:
               
chr14:3100844-3100407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
62-510
               

               
Cow position:
               
chr14:3155408-3155857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 51
               

               
Conread position:
               
85-498
               

               
Cow position:
               
chr14:680245-680657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
404, 0
               

               
Conread position:
               
99-511
               

               
Cow position:
               
chr14:433762-434172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 12
               

               
Conread position:
               
128-429
               

               
Cow position:
               
chr14:663422-663121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
162, 166
               

               
Conread position:
               
137-479
               

               
Cow position:
               
chr14:663496-663155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
133, 22
               

               
Conread position:
               
140-492
               

               
Cow position:
               
chr14:3081021-3080669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
49, 62
               

               
Conread position:
               
182-492
               

               
Cow position:
               
chr14:433761-434071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
51, 44
               

               
Conread position:
               
213-465
               

               
Cow position:
               
chr14:438345-438595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
229-493
               

               
Cow position:
               
chr14:663488-663225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
139, 15
               

               
Conread position:
               
2-445
               

               
Cow position:
               
chr15:48468543-48468995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr15:19139133-19138666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
361, 370
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr15:48468459-48468968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 113
               

               
Conread position:
               
3-403
               

               
Cow position:
               
chr15:48468628-48469037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
141, 217
               

               
Conread position:
               
56-507
               

               
Cow position:
               
chr15:19139162-19138714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
55, 9
               

               
Conread position:
               
158-430
               

               
Cow position:
               
chr15:48468447-48468719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
117, 122
               

               
Conread position:
               
1-331
               

               
Cow position:
               
chr17:44468050-44468380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr17:44467882-44468311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr17:41441017-41440551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 151
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr17:41440849-41440371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 24
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr17:44467462-44467953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr17:44467714-44468205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr17:41440933-41440441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 67
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr17:44467798-44468290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 21
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr17:44467378-44467876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 122
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr17:41440596-41440188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 47
               

               
Conread position:
               
2-466
               

               
Cow position:
               
chr17:41440764-41440300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 47
               

               
Conread position:
               
2-504
               

               
Cow position:
               
chr17:41441100-41440600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 234
               

               
Conread position:
               
3-409
               

               
Cow position:
               
chr17:41440511-41440101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 107
               

               
Conread position:
               
3-421
               

               
Cow position:
               
chr17:44467968-44468386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr17:44467632-44468121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
3-499
               

               
Cow position:
               
chr17:44467548-44468044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
4-491
               

               
Cow position:
               
chr17:41440678-41440191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 120
               

               
Conread position:
               
5-312
               

               
Cow position:
               
chr17:45350886-45350579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
21, 28
               

               
Conread position:
               
65-511
               

               
Cow position:
               
chr17:44467357-44467802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
68-467
               

               
Cow position:
               
chr17:41441118-41440719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
138, 144
               

               
Conread position:
               
70-394
               

               
Cow position:
               
chr17:45350905-45350581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
152-492
               

               
Cow position:
               
chr17:41441118-41440778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
54, 60
               

               
Conread position:
               
210-479
               

               
Cow position:
               
chr17:45350849-45350580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
147, 162
               

               
Conread position:
               
228-492
               

               
Cow position:
               
chr17:45350914-45350651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
213, 7
               

               
Conread position:
               
1-188
               

               
Cow position:
               
chr18:54687765-54687952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
1-261
               

               
Cow position:
               
chr18:50282033-50282293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 106
               

               
Conread position:
               
1-338
               

               
Cow position:
               
chr18:56391963-56391629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 108
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr18:53610192-53609838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
115, 94
               

               
Conread position:
               
1-355
               

               
Cow position:
               
chr18:56329240-56328886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
96, 100
               

               
Conread position:
               
1-380
               

               
Cow position:
               
chr18:53610108-53609729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
120, 113
               

               
Conread position:
               
1-405
               

               
Cow position:
               
chr18:56267521-56267117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
364, 371
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr18:42724397-42723988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 24
               

               
Conread position:
               
1-412
               

               
Cow position:
               
chr18:22843755-22843335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:49033191-49032700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
442, 430
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:53635517-53635027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
203, 189
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:53635601-53635110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:56316072-56316563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
355, 366
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:56316408-56316899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 14
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:56329492-56329001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 25
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr18:56391408-56390917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
485, 481
               

               
Conread position:
               
1-493
               

               
Cow position:
               
chr18:56128564-56129056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
36, 28
               

               
Conread position:
               
1-495
               

               
Cow position:
               
chr18:56128648-56129142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
121, 109
               

               
Conread position:
               
1-503
               

               
Cow position:
               
chr18:49032939-49032436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
1-504
               

               
Cow position:
               
chr18:56391492-56390991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 203
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:56391324-56390818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
478
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr18:56391576-56391072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
493, 0
               

               
Conread position:
               
1-511
               

               
Cow position:
               
chr18:55497515-55497002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 112
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr18:56267436-56267139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-352
               

               
Cow position:
               
chr18:52011915-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
114, 104
               

               
Conread position:
               
2-361
               

               
Cow position:
               
chr18:51400556-51400915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
268, 261
               

               
Conread position:
               
2-381
               

               
Cow position:
               
chr18:56128733-56129112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
188, 202
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr18:50281950-50282342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
127, 122
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr18:56316661-56317068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
108, 116
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr18:49033106-49032698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
286, 261
               

               
Conread position:
               
2-429
               

               
Cow position:
               
chr18:52011999-52011572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
2-430
               

               
Cow position:
               
chr18:50030877-50030444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
2-439
               

               
Cow position:
               
chr18:47846577-47846140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr18:56329323-56328856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr18:49022754-49023231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr18:52012167-52011690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 107
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr18:56329575-56329098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 108
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:22844006-22843507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
306, 485
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:42724564-42724074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:49032686-49032196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
368, 360
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:49032854-49032364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 97
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:49033274-49032784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 19
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:50281698-50282188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
72, 92
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:50848611-50849101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
378, 374
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:52012083-52011593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 19
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:52012335-52011845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:53610359-53609869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 108
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:53610443-53609953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:53635684-53635194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
111, 118
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:53635936-53635446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
281, 276
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:53636020-53635530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:56128145-56128635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
281, 276
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:56128481-56128971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
111, 116
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:56316157-56316647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
368, 360
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:56329743-56329253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 276
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr18:56330163-56329673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:42744525-42744034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:49033358-49032867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 31
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:52012251-52011760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 23
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:53635768-53635277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 276
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:53635852-53635361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
49, 32
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:56128229-56128720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
125, 108
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr18:56493952-56494443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
2-496
               

               
Cow position:
               
chr18:53610275-53609780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
285, 273
               

               
Conread position:
               
2-500
               

               
Cow position:
               
chr18:56316577-56317075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 370
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:49033021-49032532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
115, 107
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:56329406-56328917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:56329826-56329337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 107
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr18:56329994-56329505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
286, 275
               

               
Conread position:
               
3-511
               

               
Cow position:
               
chr18:55497681-55497175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 201
               

               
Conread position:
               
4-361
               

               
Cow position:
               
chr18:50083644-50084001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
125, 120
               

               
Conread position:
               
4-394
               

               
Cow position:
               
chr18:54668753-54668363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
4-400
               

               
Cow position:
               
chr18:54670241-54669841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
34, 38
               

               
Conread position:
               
4-473
               

               
Cow position:
               
chr18:54668837-54668366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
4-478
               

               
Cow position:
               
chr18:47846491-47846017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
274, 259
               

               
Conread position:
               
4-485
               

               
Cow position:
               
chr18:22844175-22843691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
69, 371
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr18:22843920-22843423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
124, 119
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr18:42724478-42723990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 21
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr18:55497596-55497108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 263
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr18:49032599-49032124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
362, 367
               

               
Conread position:
               
5-480
               

               
Cow position:
               
chr18:56316496-56316971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 21
               

               
Conread position:
               
5-487
               

               
Cow position:
               
chr18:54668920-54668438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
41, 21
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr18:50281785-50282272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
20, 31
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr18:56329656-56329169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 91
               

               
Conread position:
               
5-514
               

               
Cow position:
               
chr18:56316244-56316751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 367
               

               
Conread position:
               
11-492
               

               
Cow position:
               
chr18:22844336-22843852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
230, 446
               

               
Conread position:
               
12-369
               

               
Cow position:
               
chr18:42724303-42723944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
23, 179
               

               
Conread position:
               
29-410
               

               
Cow position:
               
chr18:47846718-47846337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
77, 90
               

               
Conread position:
               
34-492
               

               
Cow position:
               
chr18:52012469-52012013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
34-493
               

               
Cow position:
               
chr18:52012387-52011928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 77
               

               
Conread position:
               
35-493
               

               
Cow position:
               
chr18:56330046-56329588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 85
               

               
Conread position:
               
36-501
               

               
Cow position:
               
chr18:56329877-56329411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 329
               

               
Conread position:
               
40-309
               

               
Cow position:
               
chr18:54664064-54664332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
88, 20
               

               
Conread position:
               
40-323
               

               
Cow position:
               
chr18:22843539-22843255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 70
               

               
Conread position:
               
41-492
               

               
Cow position:
               
chr18:33064539-33064088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
77, 68
               

               
Conread position:
               
42-493
               

               
Cow position:
               
chr18:49022710-49023161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
71, 75
               

               
Conread position:
               
43-300
               

               
Cow position:
               
chr18:44818619-44818876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
157, 148
               

               
Conread position:
               
44-386
               

               
Cow position:
               
chr18:44817891-44818233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
252, 246
               

               
Conread position:
               
44-478
               

               
Cow position:
               
chr18:22843796-22843353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
67, 75
               

               
Conread position:
               
54-480
               

               
Cow position:
               
chr18:47846609-47846183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 58
               

               
Conread position:
               
55-492
               

               
Cow position:
               
chr18:42724595-42724158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
243, 222
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr18:53610473-53610037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
41, 45
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr18:56128115-56128551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
134, 148
               

               
Conread position:
               
56-492
               

               
Cow position:
               
chr18:56316379-56316815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
48, 62
               

               
Conread position:
               
56-493
               

               
Cow position:
               
chr18:56128367-56128804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
58-356
               

               
Cow position:
               
chr18:54669677-54669381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
140, 131
               

               
Conread position:
               
60-492
               

               
Cow position:
               
chr18:22844371-22843936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
265, 380
               

               
Conread position:
               
60-507
               

               
Cow position:
               
chr18:54668949-54668501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
70, 58
               

               
Conread position:
               
62-316
               

               
Cow position:
               
chr18:54687742-54687996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
235, 231
               

               
Conread position:
               
62-492
               

               
Cow position:
               
chr18:53636044-53635614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
128, 142
               

               
Conread position:
               
65-492
               

               
Cow position:
               
chr18:56330184-56329757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
71-492
               

               
Cow position:
               
chr18:56391590-56391169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
72-492
               

               
Cow position:
               
chr18:44817748-44818171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
80-398
               

               
Cow position:
               
chr18:44818572-44818890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 50
               

               
Conread position:
               
85-399
               

               
Cow position:
               
chr18:56391963-56391650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 188
               

               
Conread position:
               
118-399
               

               
Cow position:
               
chr18:44944338-44944625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
19, 99
               

               
Conread position:
               
123-502
               

               
Cow position:
               
chr18:53636067-53635687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
163, 154
               

               
Conread position:
               
124-492
               

               
Cow position:
               
chr18:53610489-53610121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
162, 153
               

               
Conread position:
               
125-393
               

               
Cow position:
               
chr18:54664065-54664332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 19
               

               
Conread position:
               
127-440
               

               
Cow position:
               
chr18:44817890-44818203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
253, 237
               

               
Conread position:
               
128-439
               

               
Cow position:
               
chr18:42724606-42724295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
153, 149
               

               
Conread position:
               
128-469
               

               
Cow position:
               
chr18:56267478-56267137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
145, 165
               

               
Conread position:
               
142-448
               

               
Cow position:
               
chr18:54669677-54669368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
273, 0
               

               
Conread position:
               
146-431
               

               
Cow position:
               
chr18:54687742-54688024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
59, 43
               

               
Conread position:
               
146-492
               

               
Cow position:
               
chr18:56316049-56316395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
158-478
               

               
Cow position:
               
chr18:55497694-55497374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 33
               

               
Conread position:
               
160-514
               

               
Cow position:
               
chr18:56391972-56391616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
126, 117
               

               
Conread position:
               
193-510
               

               
Cow position:
               
chr18:44944329-44944652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
35, 104
               

               
Conread position:
               
204-469
               

               
Cow position:
               
chr18:56267486-56267221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
208-430
               

               
Cow position:
               
chr18:44818616-44818838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
178, 148
               

               
Conread position:
               
217-492
               

               
Cow position:
               
chr18:56267557-56267282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
22, 16
               

               
Conread position:
               
230-467
               

               
Cow position:
               
chr18:54687742-54687979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
54, 50
               

               
Conread position:
               
232-457
               

               
Cow position:
               
chr18:54698249-54698473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
131, 14
               

               
Conread position:
               
238-477
               

               
Cow position:
               
chr18:54664093-54664332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
48, 39
               

               
Conread position:
               
1-505
               

               
Cow position:
               
chr19:23649913-23650418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
269, 262
               

               
Conread position:
               
2-482
               

               
Cow position:
               
chr19:23649662-23650142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
2-490
               

               
Cow position:
               
chr19:23649410-23649898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
32, 24
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr19:23649578-23650068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
27, 34
               

               
Conread position:
               
3-490
               

               
Cow position:
               
chr19:23649495-23649982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
26, 33
               

               
Conread position:
               
4-290
               

               
Cow position:
               
chr19:17615124-17615410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
62, 44
               

               
Conread position:
               
5-479
               

               
Cow position:
               
chr19:23650001-23650475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
57-493
               

               
Cow position:
               
chr19:23649297-23649733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
72, 67
               

               
Conread position:
               
65-469
               

               
Cow position:
               
chr19:23649389-23649793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
53, 45
               

               
Conread position:
               
70-374
               

               
Cow position:
               
chr19:17615106-17615410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
154-460
               

               
Cow position:
               
chr19:17615106-17615412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
82, 75
               

               
Conread position:
               
235-493
               

               
Cow position:
               
chr19:17615103-17615361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
85, 78
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr2:82799715-82800206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
372, 360
               

               
Conread position:
               
2-432
               

               
Cow position:
               
chr2:5874824-5874394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
5e-33
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
2-471
               

               
Cow position:
               
chr2:5874656-5874187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr2:82799800-82800290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
112, 118
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr2:5874907-5874417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
108, 117
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr2:82799665-82800122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
80-467
               

               
Cow position:
               
chr2:5875166-5874779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
110, 120
               

               
Conread position:
               
89-493
               

               
Cow position:
               
chr2:82799467-82799871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
29, 24
               

               
Conread position:
               
160-407
               

               
Cow position:
               
chr2:16555407-16555154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
5, 14
               

               
Conread position:
               
4-435
               

               
Cow position:
               
chr20:6660878-6660449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
23, 32
               

               
Conread position:
               
56-441
               

               
Cow position:
               
chr20:6660994-6660609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
66, 72
               

               
Conread position:
               
1-446
               

               
Cow position:
               
chr21:12608405-12607960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
31, 44
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr21:12608657-12608179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
1-479
               

               
Cow position:
               
chr21:34223031-34222553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
116, 109
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr21:12608489-12607998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr21:12658937-12659428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 39
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr21:12659357-12659848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr21:12659441-12659932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
2-440
               

               
Cow position:
               
chr21:12608824-12608386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
50, 30
               

               
Conread position:
               
2-471
               

               
Cow position:
               
chr21:12659526-12659995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 42
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr21:12608908-12608418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
112, 126
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr21:12659022-12659512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 122
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr21:12659106-12659596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr21:12659190-12659680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 108
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr21:12659274-12659764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
290, 294
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr21:12658855-12659344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 33
               

               
Conread position:
               
4-393
               

               
Cow position:
               
chr21:11852449-11852838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
4-407
               

               
Cow position:
               
chr21:12659612-12660015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
5-513
               

               
Cow position:
               
chr21:11852366-11852875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
198, 194
               

               
Conread position:
               
24-492
               

               
Cow position:
               
chr21:12658793-12659260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 11
               

               
Conread position:
               
35-493
               

               
Cow position:
               
chr21:12608707-12608249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8.96831e-44
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
42-288
               

               
Cow position:
               
chr21:12608196-12607950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
43-449
               

               
Cow position:
               
chr21:11852320-11852726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 87
               

               
Conread position:
               
56-478
               

               
Cow position:
               
chr21:12608518-12608096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
62, 57
               

               
Conread position:
               
1-310
               

               
Cow position:
               
chr22:12418754-12418445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
115, 105
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr22:12419006-12418515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
379, 355
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr22:11640628-11640980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
2-487
               

               
Cow position:
               
chr22:12418921-12418436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
116, 107
               

               
Conread position:
               
38-355
               

               
Cow position:
               
chr22:11701327-11701644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
88, 71
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr22:11701153-11701529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
76, 90
               

               
Conread position:
               
210-492
               

               
Cow position:
               
chr22:11640668-11640950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
158, 162
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr23:24639657-24640066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
119, 110
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr23:25660172-25660581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
119, 113
               

               
Conread position:
               
3-482
               

               
Cow position:
               
chr23:24560615-24560136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
115, 110
               

               
Conread position:
               
58-479
               

               
Cow position:
               
chr23:24626302-24626723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
14, 21
               

               
Conread position:
               
5-477
               

               
Cow position:
               
chr24:17078069-17077597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
30, 22
               

               
Conread position:
               
1-215
               

               
Cow position:
               
chr25:34733905-34733691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
1-217
               

               
Cow position:
               
chr25:34473860-34474076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
1-230
               

               
Cow position:
               
chr25:3664371-3664600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
1-238
               

               
Cow position:
               
chr25:3636206-3635969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
1-271
               

               
Cow position:
               
chr25:24384976-24384706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
230, 235
               

               
Conread position:
               
1-326
               

               
Cow position:
               
chr25:33127906-33128231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
117, 110
               

               
Conread position:
               
1-354
               

               
Cow position:
               
chr25:34732588-34732235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
1-369
               

               
Cow position:
               
chr25:33529118-33529487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 128
               

               
Conread position:
               
1-406
               

               
Cow position:
               
chr25:33506852-33507254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
5.99756e-43
               

               
Alignm gaps (pig, cow):
               
212, 189
               

               
Conread position:
               
1-408
               

               
Cow position:
               
chr25:4657445-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 35
               

               
Conread position:
               
1-410
               

               
Cow position:
               
chr25:33299003-33299412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
380, 373
               

               
Conread position:
               
1-411
               

               
Cow position:
               
chr25:33157201-33156791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
1-456
               

               
Cow position:
               
chr25:33530333-33530788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
1-471
               

               
Cow position:
               
chr25:25652376-25652846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 196
               

               
Conread position:
               
1-482
               

               
Cow position:
               
chr25:25653048-25653526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:3636542-3636051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 24
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:24385312-24384821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 105
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:25652292-25652783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 284
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:25652460-25652951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:25652544-25653035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:25652628-25653119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:25652712-25653203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 109
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:33157369-33156878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 108
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr25:33530165-33530656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
1-507
               

               
Cow position:
               
chr25:33530081-33530585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 24
               

               
Conread position:
               
2-299
               

               
Cow position:
               
chr25:34733988-34733691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
188, 195
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr25:33529203-33529504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
8e-35
               

               
Alignm gaps (pig, cow):
               
20, 45
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr25:22940495-22940142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
125, 111
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr25:24385059-24384706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
2-355
               

               
Cow position:
               
chr25:36844515-36844175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
295, 161
               

               
Conread position:
               
2-360
               

               
Cow position:
               
chr25:33506769-33507127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
2-394
               

               
Cow position:
               
chr25:33127823-33128215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-36
               

               
Alignm gaps (pig, cow):
               
284, 261
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr25:25652965-25653372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
2-409
               

               
Cow position:
               
chr25:34473696-34474100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 128
               

               
Conread position:
               
2-410
               

               
Cow position:
               
chr25:34770019-34769611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
35, 19
               

               
Conread position:
               
2-458
               

               
Cow position:
               
chr25:33299172-33299628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
2-469
               

               
Cow position:
               
chr25:34473612-34474076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 188
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr25:3664036-3664512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 23
               

               
Conread position:
               
2-485
               

               
Cow position:
               
chr25:24385227-24384745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 20
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr25:24385395-24384905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 354
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr25:33144870-33145357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
115, 108
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr25:33298752-33299242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
281, 270
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr25:34473528-34474015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
282, 270
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr25:36800652-36801142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr25:36800820-36801310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
185, 198
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr25:24398966-24398478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
112, 118
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chr25:34763183-34763671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr25:25652209-25652712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
194, 188
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr25:25652797-25653300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 359
               

               
Conread position:
               
2-507
               

               
Cow position:
               
chr25:33530250-33530753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
3-226
               

               
Cow position:
               
chr25:3676182-3676405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
3-322
               

               
Cow position:
               
chr25:3636288-3635969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
33, 25
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr25:3676014-3676399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 104
               

               
Conread position:
               
3-429
               

               
Cow position:
               
chr25:33298669-33299095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
3-491
               

               
Cow position:
               
chr25:23267474-23266993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
333, 175
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr25:3663953-3664442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
4-353
               

               
Cow position:
               
chr25:22941354-22941005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
31, 20
               

               
Conread position:
               
4-429
               

               
Cow position:
               
chr25:25652883-25653308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 103
               

               
Conread position:
               
4-443
               

               
Cow position:
               
chr25:33529037-33529476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
381, 397
               

               
Conread position:
               
4-491
               

               
Cow position:
               
chr25:34762936-34763420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
5-291
               

               
Cow position:
               
chr25:3636982-3636696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
28, 20
               

               
Conread position:
               
5-394
               

               
Cow position:
               
chr25:3636370-3635981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 361
               

               
Conread position:
               
5-429
               

               
Cow position:
               
chr25:33298839-33299263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
185, 199
               

               
Conread position:
               
5-439
               

               
Cow position:
               
chr25:24385140-24384706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 92
               

               
Conread position:
               
5-467
               

               
Cow position:
               
chr25:24398879-24398420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
139, 70
               

               
Conread position:
               
5-485
               

               
Cow position:
               
chr25:3664123-3664603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 101
               

               
Conread position:
               
11-492
               

               
Cow position:
               
chr25:34762859-34763337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
356, 263
               

               
Conread position:
               
19-492
               

               
Cow position:
               
chr25:3636608-3636135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
14, 29
               

               
Conread position:
               
22-478
               

               
Cow position:
               
chr25:3675949-3676405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 85
               

               
Conread position:
               
31-314
               

               
Cow position:
               
chr25:24398688-24398405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
87, 74
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chr25:33157419-33156962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 78
               

               
Conread position:
               
40-507
               

               
Cow position:
               
chr25:33530037-33530501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 25
               

               
Conread position:
               
44-375
               

               
Cow position:
               
chr25:22235976-22236307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
76, 67
               

               
Conread position:
               
44-440
               

               
Cow position:
               
chr25:3636415-3636019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
56-348
               

               
Cow position:
               
chr25:326488-326780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
13, 25
               

               
Conread position:
               
56-407
               

               
Cow position:
               
chr25:36844545-36844203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
240, 188
               

               
Conread position:
               
56-426
               

               
Cow position:
               
chr25:22940525-22940155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
56-477
               

               
Cow position:
               
chr25:34447013-34447434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
225, 207
               

               
Conread position:
               
56-479
               

               
Cow position:
               
chr25:33127793-33128216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
305, 316
               

               
Conread position:
               
58-429
               

               
Cow position:
               
chr25:34732615-34732244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
137, 142
               

               
Conread position:
               
60-492
               

               
Cow position:
               
chr25:3663926-3664358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
320, 296
               

               
Conread position:
               
62-492
               

               
Cow position:
               
chr25:23267499-23267076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
362, 202
               

               
Conread position:
               
62-492
               

               
Cow position:
               
chr25:24398990-24398563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
128, 139
               

               
Conread position:
               
64-492
               

               
Cow position:
               
chr25:25652187-25652615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr25:4657463-4657038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
123, 146
               

               
Conread position:
               
67-492
               

               
Cow position:
               
chr25:34473509-34473931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
300, 305
               

               
Conread position:
               
70-430
               

               
Cow position:
               
chr25:22941372-22941012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 49
               

               
Conread position:
               
79-444
               

               
Cow position:
               
chr25:33506762-33507127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
86-355
               

               
Cow position:
               
chr25:34733988-34733719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
36, 25
               

               
Conread position:
               
88-486
               

               
Cow position:
               
chr25:33529037-33529435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
99-381
               

               
Cow position:
               
chr25:427279-427561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
28, 24
               

               
Conread position:
               
99-479
               

               
Cow position:
               
chr25:33127668-33128048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
105-492
               

               
Cow position:
               
chr25:3675948-3676335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 84
               

               
Conread position:
               
116-492
               

               
Cow position:
               
chr25:33157506-33157130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
127-418
               

               
Cow position:
               
chr25:3637028-3636734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
63, 77
               

               
Conread position:
               
130-479
               

               
Cow position:
               
chr25:22940535-22940186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
73, 63
               

               
Conread position:
               
151-349
               

               
Cow position:
               
chr25:5034955-5034757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
130, 125
               

               
Conread position:
               
152-492
               

               
Cow position:
               
chr25:34770121-34769781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
48, 61
               

               
Conread position:
               
163-470
               

               
Cow position:
               
chr25:3637079-3636769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
57, 113
               

               
Conread position:
               
164-492
               

               
Cow position:
               
chr25:33529029-33529357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
198, 208
               

               
Conread position:
               
164-500
               

               
Cow position:
               
chr25:24385401-24385066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 36
               

               
Conread position:
               
170-467
               

               
Cow position:
               
chr25:34733988-34733691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
190, 196
               

               
Conread position:
               
212-439
               

               
Cow position:
               
chr25:22941314-22941087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
78, 83
               

               
Conread position:
               
212-468
               

               
Cow position:
               
chr25:427308-427564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
212-492
               

               
Cow position:
               
chr25:22235892-22236172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
220-492
               

               
Cow position:
               
chr25:34734023-34733750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
11, 153
               

               
Conread position:
               
223-484
               

               
Cow position:
               
chr25:22940526-22940264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
6e-22
               

               
Alignm gaps (pig, cow):
               
65, 54
               

               
Conread position:
               
233-492
               

               
Cow position:
               
chr25:33506748-33507007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
40, 52
               

               
Conread position:
               
235-499
               

               
Cow position:
               
chr25:24385414-24385151 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
206, 213
               

               
Conread position:
               
245-507
               

               
Cow position:
               
chr25:33529026-33529286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
120, 127
               

               
Conread position:
               
1-227
               

               
Cow position:
               
chr28:34696352-34696578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
45, 28
               

               
Conread position:
               
2-298
               

               
Cow position:
               
chr28:33210333-33210630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
228, 0
               

               
Conread position:
               
2-397
               

               
Cow position:
               
chr28:34696185-34696580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
3-480
               

               
Cow position:
               
chr28:34696102-34696579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chr28:34696018-34696507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 18
               

               
Conread position:
               
3-493
               

               
Cow position:
               
chr28:34695850-34696340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
33, 26
               

               
Conread position:
               
96-492
               

               
Cow position:
               
chr28:33210259-33210656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
270, 276
               

               
Conread position:
               
1-469
               

               
Cow position:
               
chr3:20194826-20195294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 106
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr3:20194550-20195072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 389
               

               
Conread position:
               
2-263
               

               
Cow position:
               
chr3:20194467-20194729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr3:20194743-20195220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 195
               

               
Conread position:
               
22-492
               

               
Cow position:
               
chr3:20194676-20195149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 86
               

               
Conread position:
               
55-492
               

               
Cow position:
               
chr3:20194436-20194897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
60, 54
               

               
Conread position:
               
62-315
               

               
Cow position:
               
chr3:63430872-63431125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
139-407
               

               
Cow position:
               
chr3:20194436-20194703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
242, 222
               

               
Conread position:
               
1-237
               

               
Cow position:
               
chr4:65546416-65546181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
1-268
               

               
Cow position:
               
chr4:65494663-65494396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
128, 122
               

               
Conread position:
               
1-344
               

               
Cow position:
               
chr4:65703563-65703220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 35
               

               
Conread position:
               
1-393
               

               
Cow position:
               
chr4:65702858-65702466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
282, 274
               

               
Conread position:
               
1-394
               

               
Cow position:
               
chr4:65146692-65147088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 17
               

               
Conread position:
               
1-467
               

               
Cow position:
               
chr4:65121553-65122019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
1-473
               

               
Cow position:
               
chr4:65261616-65261144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 40
               

               
Conread position:
               
1-491
               

               
Cow position:
               
chr4:65703479-65702992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr4:65350065-65350553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 42
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr4:65495005-65494508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 377
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr4:65350149-65350644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 206
               

               
Conread position:
               
1-514
               

               
Cow position:
               
chr4:65494921-65494400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 114
               

               
Conread position:
               
2-254
               

               
Cow position:
               
chr4:65157952-65158205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 127
               

               
Conread position:
               
2-313
               

               
Cow position:
               
chr4:65350483-65350794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
2-341
               

               
Cow position:
               
chr4:65146441-65146780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
226, 242
               

               
Conread position:
               
2-354
               

               
Cow position:
               
chr4:65121722-65122074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 123
               

               
Conread position:
               
2-443
               

               
Cow position:
               
chr4:65349898-65350339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 126
               

               
Conread position:
               
2-470
               

               
Cow position:
               
chr4:65349982-65350450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
36, 42
               

               
Conread position:
               
2-479
               

               
Cow position:
               
chr4:65350318-65350792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
3-388
               

               
Cow position:
               
chr4:65261530-65261145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 106
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr4:65121164-65121346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
35, 39
               

               
Conread position:
               
5-511
               

               
Cow position:
               
chr4:65261699-65261192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 377
               

               
Conread position:
               
22-492
               

               
Cow position:
               
chr4:65349834-65350304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 38
               

               
Conread position:
               
25-402
               

               
Cow position:
               
chr4:65146381-65146757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
44-485
               

               
Cow position:
               
chr4:65703604-65703163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
316, 328
               

               
Conread position:
               
55-321
               

               
Cow position:
               
chr4:65546447-65546181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
18, 27
               

               
Conread position:
               
60-400
               

               
Cow position:
               
chr4:65157833-65158182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
86, 147
               

               
Conread position:
               
62-443
               

               
Cow position:
               
chr4:65349790-65350171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
62-477
               

               
Cow position:
               
chr4:65702881-65702466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
126, 153
               

               
Conread position:
               
62-478
               

               
Cow position:
               
chr4:65495301-65494864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
179, 166
               

               
Conread position:
               
65-492
               

               
Cow position:
               
chr4:65703667-65703240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
302, 315
               

               
Conread position:
               
68-479
               

               
Cow position:
               
chr4:65495022-65494605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
32, 28
               

               
Conread position:
               
74-492
               

               
Cow position:
               
chr4:65261873-65261461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
238, 59
               

               
Conread position:
               
78-504
               

               
Cow position:
               
chr4:65121546-65121970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
51, 45
               

               
Conread position:
               
89-316
               

               
Cow position:
               
chr4:65121164-65121391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
40, 35
               

               
Conread position:
               
133-393
               

               
Cow position:
               
chr4:65422432-65422698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
103, 234
               

               
Conread position:
               
144-478
               

               
Cow position:
               
chr4:65157833-65158176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
75, 132
               

               
Conread position:
               
146-479
               

               
Cow position:
               
chr4:65702881-65702548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
215, 226
               

               
Conread position:
               
146-492
               

               
Cow position:
               
chr4:65349790-65350136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
89, 82
               

               
Conread position:
               
163-315
               

               
Cow position:
               
chr4:65146941-65147093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
163-362
               

               
Cow position:
               
chr4:65402055-65402254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
177, 161
               

               
Conread position:
               
164-436
               

               
Cow position:
               
chr4:65546421-65546145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
197, 208
               

               
Conread position:
               
164-485
               

               
Cow position:
               
chr4:65146435-65146755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
167-469
               

               
Cow position:
               
chr4:65146356-65146656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
207-516
               

               
Cow position:
               
chr4:65702904-65702597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
16, 26
               

               
Conread position:
               
210-451
               

               
Cow position:
               
chr4:65495321-65495079 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
188, 199
               

               
Conread position:
               
212-368
               

               
Cow position:
               
chr4:65121203-65121359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
225-479
               

               
Cow position:
               
chr4:65121132-65121386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
67, 72
               

               
Conread position:
               
228-492
               

               
Cow position:
               
chr4:65157833-65158106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 233
               

               
Conread position:
               
239-402
               

               
Cow position:
               
chr4:65402048-65402210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
128, 9
               

               
Conread position:
               
244-477
               

               
Cow position:
               
chr4:65121544-65121777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
37, 52
               

               
Conread position:
               
253-485
               

               
Cow position:
               
chr4:65546416-65546184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
195, 203
               

               
Conread position:
               
1-492
               

               
Cow position:
               
chr6:49428836-49429327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
289, 296
               

               
Conread position:
               
1-499
               

               
Cow position:
               
chr6:49428332-49428830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 43
               

               
Conread position:
               
2-231
               

               
Cow position:
               
chr6:49429257-49429486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
2-456
               

               
Cow position:
               
chr6:49428753-49429207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 18
               

               
Conread position:
               
2-478
               

               
Cow position:
               
chr6:49429005-49429481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 109
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr6:49428249-49428739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 126
               

               
Conread position:
               
2-492
               

               
Cow position:
               
chr6:49428669-49429159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 36
               

               
Conread position:
               
2-514
               

               
Cow position:
               
chr6:49428585-49429095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr6:49428503-49428991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 40
               

               
Conread position:
               
4-492
               

               
Cow position:
               
chr6:49428923-49429411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 107
               

               
Conread position:
               
5-492
               

               
Cow position:
               
chr6:49428420-49428907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 35
               

               
Conread position:
               
51-492
               

               
Cow position:
               
chr6:49428214-49428655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 77
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr7:12293284-12293789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 24
               

               
Conread position:
               
1-508
               

               
Cow position:
               
chr7:12293368-12293873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 25
               

               
Conread position:
               
2-346
               

               
Cow position:
               
chr7:28846780-28847123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
2-430
               

               
Cow position:
               
chr7:28846528-28846956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 354
               

               
Conread position:
               
4-477
               

               
Cow position:
               
chr7:28846446-28846919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
445, 436
               

               
Conread position:
               
4-504
               

               
Cow position:
               
chr7:12293539-12294039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
112, 107
               

               
Conread position:
               
5-399
               

               
Cow position:
               
chr7:28846699-28847093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 105
               

               
Conread position:
               
5-427
               

               
Cow position:
               
chr7:12293456-12293878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 105
               

               
Conread position:
               
30-480
               

               
Cow position:
               
chr7:28846640-28847090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
84, 90
               

               
Conread position:
               
63-516
               

               
Cow position:
               
chr7:28845850-28846312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 48
               

               
Conread position:
               
70-492
               

               
Cow position:
               
chr7:12293269-12293691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 31
               

               
Conread position:
               
88-492
               

               
Cow position:
               
chr7:28846446-28846850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 115
               

               
Conread position:
               
159-492
               

               
Cow position:
               
chr7:28846433-28846766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
185, 194
               

               
Conread position:
               
236-493
               

               
Cow position:
               
chr7:12293267-12293524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
45, 29
               

               
Conread position:
               
1-470
               

               
Cow position:
               
chrX:14181370-14180901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 24
               

               
Conread position:
               
2-250
               

               
Cow position:
               
chrX:13826423-13826175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
125, 121
               

               
Conread position:
               
2-487
               

               
Cow position:
               
chrX:13826759-13826274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
29, 19
               

               
Conread position:
               
2-493
               

               
Cow position:
               
chrX:14181621-14181130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 118
               

               
Conread position:
               
3-492
               

               
Cow position:
               
chrX:13826926-13826437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 106
               

               
Conread position:
               
4-418
               

               
Cow position:
               
chrX:13826589-13826175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
27, 17
               

               
Conread position:
               
5-395
               

               
Cow position:
               
chrX:14181282-14180892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
30, 19
               

               
Conread position:
               
35-492
               

               
Cow position:
               
chrX:13826810-13826353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
54-482
               

               
Cow position:
               
chrX:14181485-14181057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 69
               

               
Conread position:
               
68-492
               

               
Cow position:
               
chrX:14181639-14181215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
217, 227