Cow genome map
| Conread name: | Ss1.1-rmas924b_k4.5 | 
| Conread position: | 12-592 | 
| Cow position: | chr1:20039147-20039727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 504 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 73 | 
| Conread position: | 659-990 | 
| Cow position: | chr1:86110851-86110517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 347 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 33, 9 | 
| Conread position: | 669-946 | 
| Cow position: | chr1:71079069-71078777 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 39, 77 | 
| Conread position: | 669-968 | 
| Cow position: | chr1:56225355-56225673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 29, 280 | 
| Conread position: | 669-969 | 
| Cow position: | chr1:8129078-8128770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 28, 36 | 
| Conread position: | 669-970 | 
| Cow position: | chr1:61884808-61885121 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 100, 38 | 
| Conread position: | 669-971 | 
| Cow position: | chr1:56618762-56618444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 39, 86 | 
| Conread position: | 669-971 | 
| Cow position: | chr1:91023579-91023258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 39, 279 | 
| Conread position: | 669-972 | 
| Cow position: | chr1:68817910-68817589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 39, 276 | 
| Conread position: | 669-985 | 
| Cow position: | chr1:41696947-41697277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 39, 93 | 
| Conread position: | 669-991 | 
| Cow position: | chr1:41138243-41137916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 39, 98 | 
| Conread position: | 672-977 | 
| Cow position: | chr1:25383554-25383885 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 32, 281 | 
| Conread position: | 677-971 | 
| Cow position: | chr1:20104165-20104476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 30, 267 | 
| Conread position: | 677-993 | 
| Cow position: | chr1:72304474-72304173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 101, 20 | 
| Conread position: | 678-943 | 
| Cow position: | chr1:53397889-53398155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 100, 20 | 
| Conread position: | 678-990 | 
| Cow position: | chr1:75744758-75745089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 30, 81 | 
| Conread position: | 679-988 | 
| Cow position: | chr1:81290406-81290729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 77, 150 | 
| Conread position: | 695-972 | 
| Cow position: | chr1:43505444-43505735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 296 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-20 | 
| Alignm gaps (pig, cow): | 56, 13 | 
| Conread position: | 713-972 | 
| Cow position: | chr1:46143526-46143256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 56, 172 | 
| Conread position: | 719-970 | 
| Cow position: | chr1:5597267-5597003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 50, 221 | 
| Conread position: | 659-984 | 
| Cow position: | chr10:14947111-14947445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 7e-32 | 
| Alignm gaps (pig, cow): | 33, 13 | 
| Conread position: | 669-983 | 
| Cow position: | chr10:21657282-21657604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 331 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 39, 167 | 
| Conread position: | 669-993 | 
| Cow position: | chr10:45370913-45371259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 39, 280 | 
| Conread position: | 677-968 | 
| Cow position: | chr10:3275860-3276145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 192, 72 | 
| Conread position: | 678-954 | 
| Cow position: | chr10:37068545-37068258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 45, 183 | 
| Conread position: | 678-969 | 
| Cow position: | chr10:62353331-62353635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 20, 86 | 
| Conread position: | 678-985 | 
| Cow position: | chr10:2613234-2613560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 30, 268 | 
| Conread position: | 678-989 | 
| Cow position: | chr10:46327556-46327888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 30, 86 | 
| Conread position: | 678-996 | 
| Cow position: | chr10:37529398-37529072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 30, 181 | 
| Conread position: | 679-1012 | 
| Cow position: | chr10:9576169-9575830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 29, 75 | 
| Conread position: | 695-934 | 
| Cow position: | chr10:21422270-21422019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 254 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 48, 9 | 
| Conread position: | 695-969 | 
| Cow position: | chr10:35731633-35731350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 76, 8 | 
| Conread position: | 700-970 | 
| Cow position: | chr10:61510047-61509768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 48, 64 | 
| Conread position: | 714-954 | 
| Cow position: | chr10:23346396-23346144 (view UCSC Genome Browser custom track) | 
| Alignm length: | 255 | 
| Alignm identity: | 174 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 55, 130 | 
| Conread position: | 669-882 | 
| Cow position: | chr11:50778238-50778461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 669-989 | 
| Cow position: | chr11:55052751-55053071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 110, 29 | 
| Conread position: | 669-990 | 
| Cow position: | chr11:2907654-2907327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 33, 95 | 
| Conread position: | 679-955 | 
| Cow position: | chr11:28993857-28993576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 29, 75 | 
| Conread position: | 680-988 | 
| Cow position: | chr11:64334733-64335035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 69, 18 | 
| Conread position: | 681-968 | 
| Cow position: | chr11:27248369-27248674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 27, 74 | 
| Conread position: | 695-973 | 
| Cow position: | chr11:30493894-30494183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 97, 9 | 
| Conread position: | 662-988 | 
| Cow position: | chr12:15089351-15089694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 46, 190 | 
| Conread position: | 669-995 | 
| Cow position: | chr12:18123530-18123857 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 8e-26 | 
| Alignm gaps (pig, cow): | 109, 43 | 
| Conread position: | 677-981 | 
| Cow position: | chr12:20777071-20776754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 31, 78 | 
| Conread position: | 678-934 | 
| Cow position: | chr12:11056733-11057000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 91, 18 | 
| Conread position: | 680-985 | 
| Cow position: | chr12:25561227-25561544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 20, 73 | 
| Conread position: | 686-970 | 
| Cow position: | chr12:7902923-7902640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 15, 24 | 
| Conread position: | 713-968 | 
| Cow position: | chr12:18583101-18582836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 37, 230 | 
| Conread position: | 742-1032 | 
| Cow position: | chr12:12232813-12233111 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 23, 73 | 
| Conread position: | 669-953 | 
| Cow position: | chr13:24369683-24369385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 42, 177 | 
| Conread position: | 669-968 | 
| Cow position: | chr13:21235584-21235883 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 39, 21 | 
| Conread position: | 669-1007 | 
| Cow position: | chr13:20784691-20784339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 90, 38 | 
| Conread position: | 672-934 | 
| Cow position: | chr13:20666287-20666567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 37, 24 | 
| Conread position: | 672-964 | 
| Cow position: | chr13:19279192-19278884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 25, 33 | 
| Conread position: | 673-957 | 
| Cow position: | chr13:20288429-20288134 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 35, 93 | 
| Conread position: | 673-987 | 
| Cow position: | chr13:14063423-14063754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 34, 189 | 
| Conread position: | 678-989 | 
| Cow position: | chr13:17569006-17569333 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 30, 275 | 
| Conread position: | 678-993 | 
| Cow position: | chr13:57769917-57770223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 25, 74 | 
| Conread position: | 679-975 | 
| Cow position: | chr13:25817615-25817307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 6e-32 | 
| Alignm gaps (pig, cow): | 74, 19 | 
| Conread position: | 695-970 | 
| Cow position: | chr13:20473610-20473892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 9e-25 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 699-975 | 
| Cow position: | chr13:20868687-20868966 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 8e-24 | 
| Alignm gaps (pig, cow): | 72, 26 | 
| Conread position: | 745-987 | 
| Cow position: | chr13:56535470-56535233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 166 | 
| Alignm E-value: | 6e-21 | 
| Alignm gaps (pig, cow): | 11, 74 | 
| Conread position: | 668-954 | 
| Cow position: | chr14:33791347-33791048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 40, 81 | 
| Conread position: | 659-989 | 
| Cow position: | chr15:16261529-16261197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 39, 6 | 
| Conread position: | 669-868 | 
| Cow position: | chr15:16307619-16307415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 207 | 
| Alignm identity: | 143 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 39, 61 | 
| Conread position: | 669-979 | 
| Cow position: | chr15:26079157-26079471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 29, 151 | 
| Conread position: | 669-984 | 
| Cow position: | chr15:22532444-22532125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 39, 85 | 
| Conread position: | 700-954 | 
| Cow position: | chr15:24967960-24967703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 57, 16 | 
| Conread position: | 780-992 | 
| Cow position: | chr15:46283835-46284056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 156 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 13, 152 | 
| Conread position: | 796-965 | 
| Cow position: | chr15:36422677-36422509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 171 | 
| Alignm identity: | 122 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 74, 131 | 
| Conread position: | 669-977 | 
| Cow position: | chr16:48398369-48398043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 73, 30 | 
| Conread position: | 669-988 | 
| Cow position: | chr16:56231709-56232031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 66 | 
| Conread position: | 680-952 | 
| Cow position: | chr16:54579063-54579351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 23, 9 | 
| Conread position: | 680-966 | 
| Cow position: | chr16:13689558-13689863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 17, 265 | 
| Conread position: | 695-954 | 
| Cow position: | chr16:26649716-26649447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 695-989 | 
| Cow position: | chr16:8737978-8738288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 700-949 | 
| Cow position: | chr16:16570832-16571083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 46, 59 | 
| Conread position: | 700-972 | 
| Cow position: | chr16:40514563-40514287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 69, 51 | 
| Conread position: | 720-991 | 
| Cow position: | chr16:11584460-11584184 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 38, 214 | 
| Conread position: | 669-966 | 
| Cow position: | chr17:33933825-33933508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 27, 236 | 
| Conread position: | 669-971 | 
| Cow position: | chr17:908668-908985 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 5e-32 | 
| Alignm gaps (pig, cow): | 27, 77 | 
| Conread position: | 678-982 | 
| Cow position: | chr17:12536536-12536215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 24, 205 | 
| Conread position: | 695-952 | 
| Cow position: | chr17:20022562-20022288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 47, 9 | 
| Conread position: | 695-973 | 
| Cow position: | chr17:34791112-34790818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 699-994 | 
| Cow position: | chr17:21039521-21039823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 59, 13 | 
| Conread position: | 719-984 | 
| Cow position: | chr17:12959082-12959358 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 31, 159 | 
| Conread position: | 659-991 | 
| Cow position: | chr18:55505247-55505593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 49, 93 | 
| Conread position: | 669-970 | 
| Cow position: | chr18:44262477-44262793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 6, 219 | 
| Conread position: | 669-976 | 
| Cow position: | chr18:8171236-8170915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 8e-25 | 
| Alignm gaps (pig, cow): | 33, 109 | 
| Conread position: | 672-997 | 
| Cow position: | chr18:48713402-48713740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 343 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 36, 214 | 
| Conread position: | 678-967 | 
| Cow position: | chr18:18592334-18592631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 30, 94 | 
| Conread position: | 680-970 | 
| Cow position: | chr18:17391116-17390820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 85, 15 | 
| Conread position: | 695-955 | 
| Cow position: | chr18:25006608-25006351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 100, 9 | 
| Conread position: | 695-991 | 
| Cow position: | chr18:1571356-1571044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 75, 9 | 
| Conread position: | 712-972 | 
| Cow position: | chr18:43797057-43796787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 80, 39 | 
| Conread position: | 669-978 | 
| Cow position: | chr19:34955822-34955515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 39, 186 | 
| Conread position: | 673-971 | 
| Cow position: | chr19:24005542-24005848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 34, 49 | 
| Conread position: | 677-946 | 
| Cow position: | chr19:23394665-23394953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 31, 21 | 
| Conread position: | 678-972 | 
| Cow position: | chr19:7668579-7668889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 30, 145 | 
| Conread position: | 692-988 | 
| Cow position: | chr19:23784518-23784218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 76, 59 | 
| Conread position: | 695-972 | 
| Cow position: | chr19:14632133-14631847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 695-985 | 
| Cow position: | chr19:43750-44054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 75, 8 | 
| Conread position: | 697-966 | 
| Cow position: | chr19:18054342-18054072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 82, 55 | 
| Conread position: | 708-972 | 
| Cow position: | chr19:33575437-33575713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 48, 43 | 
| Conread position: | 713-970 | 
| Cow position: | chr19:34420332-34420603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 44, 226 | 
| Conread position: | 641-1004 | 
| Cow position: | chr2:45642632-45642254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 388 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 67, 17 | 
| Conread position: | 668-970 | 
| Cow position: | chr2:46189216-46188893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 40, 80 | 
| Conread position: | 669-957 | 
| Cow position: | chr2:45542512-45542211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 39, 95 | 
| Conread position: | 669-967 | 
| Cow position: | chr2:17114849-17114541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 39, 99 | 
| Conread position: | 669-967 | 
| Cow position: | chr2:22372063-22371754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 101, 56 | 
| Conread position: | 669-968 | 
| Cow position: | chr2:40488699-40489004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 79, 38 | 
| Conread position: | 669-992 | 
| Cow position: | chr2:24393802-24393467 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 80, 29 | 
| Conread position: | 669-992 | 
| Cow position: | chr2:45499319-45498978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 5e-26 | 
| Alignm gaps (pig, cow): | 34, 21 | 
| Conread position: | 677-979 | 
| Cow position: | chr2:13001697-13002007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 20, 28 | 
| Conread position: | 678-949 | 
| Cow position: | chr2:44170452-44170740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 9e-22 | 
| Alignm gaps (pig, cow): | 34, 180 | 
| Conread position: | 678-967 | 
| Cow position: | chr2:45619503-45619196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 62, 267 | 
| Conread position: | 678-989 | 
| Cow position: | chr2:18997617-18997938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 8e-31 | 
| Alignm gaps (pig, cow): | 30, 85 | 
| Conread position: | 679-966 | 
| Cow position: | chr2:33554277-33553977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 19, 88 | 
| Conread position: | 685-970 | 
| Cow position: | chr2:13684602-13684894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 73, 13 | 
| Conread position: | 695-960 | 
| Cow position: | chr2:69350654-69350374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 283 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 55, 14 | 
| Conread position: | 695-970 | 
| Cow position: | chr2:44051224-44051512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 695-980 | 
| Cow position: | chr2:46120728-46120431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 60, 9 | 
| Conread position: | 700-993 | 
| Cow position: | chr2:46164571-46164277 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 79, 44 | 
| Conread position: | 708-970 | 
| Cow position: | chr2:50449980-50449706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 27, 62 | 
| Conread position: | 713-990 | 
| Cow position: | chr2:45596911-45597203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 43, 228 | 
| Conread position: | 719-983 | 
| Cow position: | chr2:41248504-41248782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 31, 186 | 
| Conread position: | 722-967 | 
| Cow position: | chr2:82116029-82116287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 24, 32 | 
| Conread position: | 669-966 | 
| Cow position: | chr20:22064997-22065303 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 45, 274 | 
| Conread position: | 669-972 | 
| Cow position: | chr20:2298852-2298548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 38, 88 | 
| Conread position: | 669-973 | 
| Cow position: | chr20:27407949-27407646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 39, 86 | 
| Conread position: | 677-953 | 
| Cow position: | chr20:28605137-28605435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 15, 148 | 
| Conread position: | 677-987 | 
| Cow position: | chr20:28982632-28982958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 230 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 31, 145 | 
| Conread position: | 679-972 | 
| Cow position: | chr20:22265310-22265016 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 28, 71 | 
| Conread position: | 695-986 | 
| Cow position: | chr20:8307975-8308265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 720-970 | 
| Cow position: | chr20:3255024-3255279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 31, 213 | 
| Conread position: | 669-946 | 
| Cow position: | chr21:42135674-42135376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 279 | 
| Conread position: | 669-971 | 
| Cow position: | chr21:44214070-44214380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 39, 158 | 
| Conread position: | 669-979 | 
| Cow position: | chr21:24858261-24858593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 98 | 
| Conread position: | 679-1005 | 
| Cow position: | chr21:34654032-34654380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 353 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 29, 50 | 
| Conread position: | 680-989 | 
| Cow position: | chr21:742245-742561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 21, 129 | 
| Conread position: | 695-972 | 
| Cow position: | chr21:641563-641853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 700-965 | 
| Cow position: | chr21:28030269-28030541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 70, 217 | 
| Conread position: | 708-971 | 
| Cow position: | chr21:802318-802055 (view UCSC Genome Browser custom track) | 
| Alignm length: | 266 | 
| Alignm identity: | 170 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 75, 35 | 
| Conread position: | 708-1004 | 
| Cow position: | chr21:14126276-14126576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 45, 163 | 
| Conread position: | 788-972 | 
| Cow position: | chr21:8506466-8506279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 82, 143 | 
| Conread position: | 668-970 | 
| Cow position: | chr22:43812541-43812242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 25, 40 | 
| Conread position: | 669-949 | 
| Cow position: | chr22:44740971-44741249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 11, 39 | 
| Conread position: | 669-953 | 
| Cow position: | chr22:8877155-8877432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 136, 29 | 
| Conread position: | 669-969 | 
| Cow position: | chr22:43397892-43398198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 39, 85 | 
| Conread position: | 669-970 | 
| Cow position: | chr22:36433090-36432773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 87, 276 | 
| Conread position: | 669-971 | 
| Cow position: | chr22:17950085-17949776 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 123, 35 | 
| Conread position: | 672-970 | 
| Cow position: | chr22:31646375-31646681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 84, 212 | 
| Conread position: | 678-972 | 
| Cow position: | chr22:11613313-11613628 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 30, 107 | 
| Conread position: | 679-968 | 
| Cow position: | chr22:28370836-28371129 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 18, 30 | 
| Conread position: | 681-993 | 
| Cow position: | chr22:34441741-34441409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 43, 16 | 
| Conread position: | 686-972 | 
| Cow position: | chr22:17852733-17852436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 84, 22 | 
| Conread position: | 694-972 | 
| Cow position: | chr22:8357500-8357780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 13, 75 | 
| Conread position: | 730-991 | 
| Cow position: | chr22:2101003-2100728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 39, 211 | 
| Conread position: | 659-949 | 
| Cow position: | chr23:21452856-21452547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 29, 13 | 
| Conread position: | 669-970 | 
| Cow position: | chr23:2282290-2281982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 39, 98 | 
| Conread position: | 669-972 | 
| Cow position: | chr23:16881278-16880962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 39, 79 | 
| Conread position: | 680-967 | 
| Cow position: | chr23:24685147-24685443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 28, 93 | 
| Conread position: | 695-946 | 
| Cow position: | chr23:17486911-17486645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 59, 9 | 
| Conread position: | 700-969 | 
| Cow position: | chr23:19872755-19872495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 277 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 69, 45 | 
| Conread position: | 713-963 | 
| Cow position: | chr23:22586821-22587078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 260 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 31, 52 | 
| Conread position: | 796-999 | 
| Cow position: | chr23:27849023-27849228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 210 | 
| Alignm identity: | 145 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 74, 136 | 
| Conread position: | 678-986 | 
| Cow position: | chr24:17311344-17311031 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 75, 29 | 
| Conread position: | 680-970 | 
| Cow position: | chr24:11887030-11887332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 28, 6 | 
| Conread position: | 718-972 | 
| Cow position: | chr24:27284731-27285005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 52, 229 | 
| Conread position: | 669-954 | 
| Cow position: | chr25:19364181-19363875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 16, 279 | 
| Conread position: | 677-954 | 
| Cow position: | chr25:32453506-32453245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 282 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 110, 82 | 
| Conread position: | 678-965 | 
| Cow position: | chr25:7641561-7641259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 74, 183 | 
| Conread position: | 695-945 | 
| Cow position: | chr25:23245091-23244828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 74, 9 | 
| Conread position: | 695-970 | 
| Cow position: | chr25:26679139-26679428 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 62, 9 | 
| Conread position: | 700-987 | 
| Cow position: | chr25:24572984-24573283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 68, 19 | 
| Conread position: | 704-967 | 
| Cow position: | chr25:14720665-14720930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 273 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 40, 175 | 
| Conread position: | 647-1000 | 
| Cow position: | chr26:647844-647472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 23, 61 | 
| Conread position: | 669-953 | 
| Cow position: | chr26:13802013-13802311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 29, 82 | 
| Conread position: | 678-968 | 
| Cow position: | chr26:9535426-9535731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 15, 69 | 
| Conread position: | 678-972 | 
| Cow position: | chr26:24240584-24240906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 30, 184 | 
| Conread position: | 705-953 | 
| Cow position: | chr26:28423226-28423488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 65, 9 | 
| Conread position: | 719-990 | 
| Cow position: | chr26:33202116-33201832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 73, 222 | 
| Conread position: | 720-970 | 
| Cow position: | chr26:20291738-20291473 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 49, 24 | 
| Conread position: | 669-954 | 
| Cow position: | chr27:27632536-27632824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 94, 166 | 
| Conread position: | 669-972 | 
| Cow position: | chr27:30890361-30890052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 39, 186 | 
| Conread position: | 669-1002 | 
| Cow position: | chr27:17397378-17397730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 39, 9 | 
| Conread position: | 701-970 | 
| Cow position: | chr27:22547370-22547635 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 70, 43 | 
| Conread position: | 708-985 | 
| Cow position: | chr27:23559999-23560295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 46, 52 | 
| Conread position: | 714-986 | 
| Cow position: | chr27:22171325-22171040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 50, 227 | 
| Conread position: | 659-991 | 
| Cow position: | chr28:8347609-8347964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 49, 204 | 
| Conread position: | 669-954 | 
| Cow position: | chr28:13474188-13474491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 39, 276 | 
| Conread position: | 669-972 | 
| Cow position: | chr28:8787427-8787749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 39, 181 | 
| Conread position: | 669-972 | 
| Cow position: | chr28:21844847-21845162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 320 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 81, 275 | 
| Conread position: | 669-989 | 
| Cow position: | chr28:11884632-11884304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 29, 86 | 
| Conread position: | 669-993 | 
| Cow position: | chr28:20124671-20125009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 39, 86 | 
| Conread position: | 669-996 | 
| Cow position: | chr28:11079194-11079536 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 32, 152 | 
| Conread position: | 677-971 | 
| Cow position: | chr28:25056866-25057165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 31, 38 | 
| Conread position: | 679-1008 | 
| Cow position: | chr28:3024014-3023673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 80, 69 | 
| Conread position: | 695-954 | 
| Cow position: | chr28:1099741-1099485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 59, 13 | 
| Conread position: | 699-970 | 
| Cow position: | chr28:5074588-5074313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 284 | 
| Alignm identity: | 188 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 50, 157 | 
| Conread position: | 719-972 | 
| Cow position: | chr28:4013028-4013293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 270 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 31, 39 | 
| Conread position: | 669-1007 | 
| Cow position: | chr29:34773853-34773512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 350 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 39, 184 | 
| Conread position: | 669-1013 | 
| Cow position: | chr29:22162372-22162019 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 220 | 
| Conread position: | 672-973 | 
| Cow position: | chr29:36530751-36531071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 31, 25 | 
| Conread position: | 680-1002 | 
| Cow position: | chr29:19949198-19949539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 55, 24 | 
| Conread position: | 713-966 | 
| Cow position: | chr29:36952371-36952114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 36, 141 | 
| Conread position: | 713-1009 | 
| Cow position: | chr29:20770272-20770582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 40, 230 | 
| Conread position: | 718-970 | 
| Cow position: | chr29:41112941-41112688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 74, 41 | 
| Conread position: | 669-868 | 
| Cow position: | chr3:26874448-26874662 (view UCSC Genome Browser custom track) | 
| Alignm length: | 215 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 669-952 | 
| Cow position: | chr3:70609485-70609786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 39, 132 | 
| Conread position: | 669-954 | 
| Cow position: | chr3:76922804-76922510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 39, 215 | 
| Conread position: | 669-972 | 
| Cow position: | chr3:68708145-68707841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 39, 95 | 
| Conread position: | 669-972 | 
| Cow position: | chr3:68881253-68880950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 29, 95 | 
| Conread position: | 669-980 | 
| Cow position: | chr3:48362943-48363257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 106, 39 | 
| Conread position: | 669-982 | 
| Cow position: | chr3:9641424-9641747 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 20, 40 | 
| Conread position: | 669-992 | 
| Cow position: | chr3:50768541-50768878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 39, 108 | 
| Conread position: | 672-930 | 
| Cow position: | chr3:26681936-26681675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 78, 25 | 
| Conread position: | 672-970 | 
| Cow position: | chr3:55177889-55177572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 26, 274 | 
| Conread position: | 677-979 | 
| Cow position: | chr3:78077060-78077381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 66, 266 | 
| Conread position: | 677-991 | 
| Cow position: | chr3:2396912-2396590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 31, 48 | 
| Conread position: | 679-973 | 
| Cow position: | chr3:51402781-51403078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 76, 63 | 
| Conread position: | 699-954 | 
| Cow position: | chr3:15951019-15950754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 269 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 78, 45 | 
| Conread position: | 699-1015 | 
| Cow position: | chr3:59604737-59605068 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 50, 60 | 
| Conread position: | 661-946 | 
| Cow position: | chr4:19097158-19097462 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 37, 15 | 
| Conread position: | 669-954 | 
| Cow position: | chr4:52832143-52831836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 31, 49 | 
| Conread position: | 669-987 | 
| Cow position: | chr4:38944384-38944048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 6, 86 | 
| Conread position: | 669-989 | 
| Cow position: | chr4:36290503-36290837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 222 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 39, 96 | 
| Conread position: | 669-998 | 
| Cow position: | chr4:54455468-54455126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 346 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 30, 306 | 
| Conread position: | 670-921 | 
| Cow position: | chr4:68889681-68889424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 78, 28 | 
| Conread position: | 676-990 | 
| Cow position: | chr4:61897648-61897339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 94, 5 | 
| Conread position: | 699-972 | 
| Cow position: | chr4:23880751-23880475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 280 | 
| Alignm identity: | 181 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 71, 162 | 
| Conread position: | 719-968 | 
| Cow position: | chr4:37991526-37991782 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 31, 100 | 
| Conread position: | 669-953 | 
| Cow position: | chr5:30253649-30253953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 39, 86 | 
| Conread position: | 669-954 | 
| Cow position: | chr5:30302801-30303095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 299 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 20, 215 | 
| Conread position: | 669-967 | 
| Cow position: | chr5:56028619-56028318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 34, 28 | 
| Conread position: | 669-969 | 
| Cow position: | chr5:7044799-7044477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 39, 280 | 
| Conread position: | 669-970 | 
| Cow position: | chr5:44028393-44028078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 23, 36 | 
| Conread position: | 669-972 | 
| Cow position: | chr5:57935201-57934887 (view UCSC Genome Browser custom track) | 
| Alignm length: | 321 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 39, 217 | 
| Conread position: | 669-975 | 
| Cow position: | chr5:56070764-56071093 (view UCSC Genome Browser custom track) | 
| Alignm length: | 332 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 39, 219 | 
| Conread position: | 669-989 | 
| Cow position: | chr5:35826511-35826846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 338 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 39, 305 | 
| Conread position: | 678-971 | 
| Cow position: | chr5:21828783-21829095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 30, 175 | 
| Conread position: | 679-986 | 
| Cow position: | chr5:44446950-44446629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 27, 205 | 
| Conread position: | 695-987 | 
| Cow position: | chr5:59627035-59626726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 4e-25 | 
| Alignm gaps (pig, cow): | 58, 9 | 
| Conread position: | 702-991 | 
| Cow position: | chr5:50943203-50942906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 9, 43 | 
| Conread position: | 669-898 | 
| Cow position: | chr6:6400873-6401123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 251 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 669-954 | 
| Cow position: | chr6:49398692-49398402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 33, 94 | 
| Conread position: | 669-971 | 
| Cow position: | chr6:11192544-11192236 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 39, 7 | 
| Conread position: | 669-994 | 
| Cow position: | chr6:31535645-31535305 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 3e-23 | 
| Alignm gaps (pig, cow): | 28, 36 | 
| Conread position: | 672-957 | 
| Cow position: | chr6:19264571-19264271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 36, 273 | 
| Conread position: | 672-972 | 
| Cow position: | chr6:55282362-55282047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 35, 272 | 
| Conread position: | 678-954 | 
| Cow position: | chr6:54132748-54133038 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 79, 20 | 
| Conread position: | 681-975 | 
| Cow position: | chr6:24468457-24468151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 27, 67 | 
| Conread position: | 669-952 | 
| Cow position: | chr7:8658438-8658741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 39, 68 | 
| Conread position: | 669-953 | 
| Cow position: | chr7:53382125-53382409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 294 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 38, 210 | 
| Conread position: | 669-970 | 
| Cow position: | chr7:35275156-35274841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 6e-31 | 
| Alignm gaps (pig, cow): | 39, 198 | 
| Conread position: | 669-971 | 
| Cow position: | chr7:15569966-15570283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 39, 273 | 
| Conread position: | 669-972 | 
| Cow position: | chr7:22793273-22793583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 26, 211 | 
| Conread position: | 669-987 | 
| Cow position: | chr7:31171027-31170695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 225 | 
| Conread position: | 669-990 | 
| Cow position: | chr7:36996299-36996623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 328 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 81, 70 | 
| Conread position: | 670-986 | 
| Cow position: | chr7:9449725-9449409 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 37, 75 | 
| Conread position: | 678-970 | 
| Cow position: | chr7:37394250-37394543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 90, 20 | 
| Conread position: | 678-973 | 
| Cow position: | chr7:4764781-4765087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 77, 208 | 
| Conread position: | 695-989 | 
| Cow position: | chr7:60869903-60870188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 8, 68 | 
| Conread position: | 699-995 | 
| Cow position: | chr7:17750882-17750575 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 15, 243 | 
| Conread position: | 742-982 | 
| Cow position: | chr7:26871981-26871733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 252 | 
| Alignm identity: | 169 | 
| Alignm E-value: | 7e-21 | 
| Alignm gaps (pig, cow): | 37, 23 | 
| Conread position: | 668-967 | 
| Cow position: | chr8:20107892-20107583 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 40, 89 | 
| Conread position: | 669-969 | 
| Cow position: | chr8:10970724-10971048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 41, 282 | 
| Conread position: | 669-970 | 
| Cow position: | chr8:38572381-38572056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 41, 282 | 
| Conread position: | 669-973 | 
| Cow position: | chr8:19717202-19716895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 85, 39 | 
| Conread position: | 678-954 | 
| Cow position: | chr8:46082069-46082362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 30, 264 | 
| Conread position: | 679-954 | 
| Cow position: | chr8:55716660-55716949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 71, 25 | 
| Conread position: | 679-989 | 
| Cow position: | chr8:17199529-17199196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7e-22 | 
| Alignm gaps (pig, cow): | 15, 62 | 
| Conread position: | 700-972 | 
| Cow position: | chr8:16957557-16957828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 279 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 7e-23 | 
| Alignm gaps (pig, cow): | 49, 70 | 
| Conread position: | 669-954 | 
| Cow position: | chr9:24887346-24887047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 8e-23 | 
| Alignm gaps (pig, cow): | 39, 101 | 
| Conread position: | 669-954 | 
| Cow position: | chr9:34957908-34958210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 39, 275 | 
| Conread position: | 669-969 | 
| Cow position: | chr9:34666565-34666279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 39, 76 | 
| Conread position: | 669-972 | 
| Cow position: | chr9:11299544-11299848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 5e-29 | 
| Alignm gaps (pig, cow): | 39, 78 | 
| Conread position: | 669-987 | 
| Cow position: | chr9:4341023-4341347 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 29, 86 | 
| Conread position: | 669-1006 | 
| Cow position: | chr9:41728404-41728050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 361 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 7e-33 | 
| Alignm gaps (pig, cow): | 30, 68 | 
| Conread position: | 680-984 | 
| Cow position: | chr9:18380994-18380678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 17, 25 | 
| Conread position: | 682-991 | 
| Cow position: | chr9:50606815-50607125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 323 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 25, 71 | 
| Conread position: | 683-991 | 
| Cow position: | chr9:33101008-33101300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 207, 78 | 
| Conread position: | 695-1005 | 
| Cow position: | chr9:40543208-40543527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 210 | 
| Alignm E-value: | 2e-21 | 
| Alignm gaps (pig, cow): | 80, 9 | 
| Conread position: | 719-968 | 
| Cow position: | chr9:8628823-8629085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 34, 220 | 
| Conread position: | 668-972 | 
| Cow position: | chrX:29050155-29050476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 40, 277 | 
| Conread position: | 669-954 | 
| Cow position: | chrX:1466070-1466379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 311 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 26, 218 | 
| Conread position: | 669-993 | 
| Cow position: | chrX:34837145-34836817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 48, 30 | 
| Conread position: | 678-967 | 
| Cow position: | chrX:8869486-8869175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 7e-25 | 
| Alignm gaps (pig, cow): | 30, 271 | 
| Conread position: | 678-983 | 
| Cow position: | chrX:9201468-9201789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 3e-26 | 
| Alignm gaps (pig, cow): | 30, 80 | 
| Conread position: | 695-931 | 
| Cow position: | chrX:31252358-31252603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 75, 9 | 
| Conread position: | 796-983 | 
| Cow position: | chrX:27145655-27145844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 191 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 74, 133 | 
