Cow genome map
| Conread name: | Ss1.1-rmcp07c_k21.5 |
| Conread position: | 432-631 |
| Cow position: | chr1:72557463-72557663 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 164 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 67 |
| Conread position: | 145-412 |
| Cow position: | chr10:49444996-49444733 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 440-631 |
| Cow position: | chr10:49444678-49444488 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 157 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 450-631 |
| Cow position: | chr10:7907395-7907577 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 152 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 103, 49 |
| Conread position: | 233-379 |
| Cow position: | chr11:9281037-9281177 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 6 |
| Conread position: | 478-631 |
| Cow position: | chr12:23120166-23120012 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 21 |
| Conread position: | 452-593 |
| Cow position: | chr14:18407869-18407730 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 101, 33 |
| Conread position: | 536-631 |
| Cow position: | chr14:33423540-33423443 (view UCSC Genome Browser custom track) |
| Alignm length: | 98 |
| Alignm identity: | 84 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 413-630 |
| Cow position: | chr16:1219430-1219222 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 481-631 |
| Cow position: | chr16:13213254-13213405 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 143 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 18 |
| Conread position: | 486-631 |
| Cow position: | chr16:43679702-43679846 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 13 |
| Conread position: | 229-631 |
| Cow position: | chr17:22514981-22514571 (view UCSC Genome Browser custom track) |
| Alignm length: | 415 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 10 |
| Conread position: | 241-323 |
| Cow position: | chr17:25553113-25553031 (view UCSC Genome Browser custom track) |
| Alignm length: | 83 |
| Alignm identity: | 75 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 443-631 |
| Cow position: | chr17:25552972-25552783 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 56 |
| Conread position: | 440-631 |
| Cow position: | chr18:48769911-48769724 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 111, 48 |
| Conread position: | 469-631 |
| Cow position: | chr2:78378009-78377845 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 6, 31 |
| Conread position: | 474-631 |
| Cow position: | chr2:50181428-50181270 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 146 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 25 |
| Conread position: | 255-379 |
| Cow position: | chr21:40856765-40856888 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 350-578 |
| Cow position: | chr21:2937313-2937095 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 203, 61 |
| Conread position: | 436-628 |
| Cow position: | chr21:23613313-23613120 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 161 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 117, 63 |
| Conread position: | 490-631 |
| Cow position: | chr22:40607211-40607065 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 413-630 |
| Cow position: | chr27:17570923-17570715 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 8, 27 |
| Conread position: | 417-631 |
| Cow position: | chr27:631533-631318 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 38 |
| Conread position: | 482-631 |
| Cow position: | chr27:29012195-29012345 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 76, 17 |
| Conread position: | 145-411 |
| Cow position: | chr29:5118849-5118583 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 94 |
| Conread position: | 395-631 |
| Cow position: | chr29:18407534-18407769 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 28, 19 |
| Conread position: | 463-610 |
| Cow position: | chr29:5118581-5118433 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 95, 36 |
| Conread position: | 507-631 |
| Cow position: | chr3:70317073-70317199 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 426-631 |
| Cow position: | chr5:55181319-55181125 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 127, 63 |
| Conread position: | 1-124 |
| Cow position: | chr7:27012467-27012590 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 436-589 |
| Cow position: | chr7:53366409-53366260 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 117, 18 |
| Conread position: | 145-332 |
| Cow position: | chr8:15408150-15407964 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 528-631 |
| Cow position: | chr9:39578809-39578914 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 89 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 30, 0 |