Cow genome map
| Conread name: | Ss1.1-rmed34c_e22.5.5 |
| Conread position: | 51-988 |
| Cow position: | chr1:57968037-57967113 (view UCSC Genome Browser custom track) |
| Alignm length: | 949 |
| Alignm identity: | 771 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 34 |
| Conread position: | 55-256 |
| Cow position: | chr1:8778356-8778558 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 45, 171 |
| Conread position: | 56-643 |
| Cow position: | chr13:48444819-48444266 (view UCSC Genome Browser custom track) |
| Alignm length: | 592 |
| Alignm identity: | 476 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 427, 94 |
| Conread position: | 675-988 |
| Cow position: | chr13:48444263-48443960 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 50 |
| Conread position: | 151-553 |
| Cow position: | chr15:7507048-7507450 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 50-795 |
| Cow position: | chr17:18501641-18502402 (view UCSC Genome Browser custom track) |
| Alignm length: | 765 |
| Alignm identity: | 622 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 371, 67 |
| Conread position: | 121-643 |
| Cow position: | chr17:38760122-38760645 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 388 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 322 |
| Conread position: | 59-665 |
| Cow position: | chr21:24172849-24172251 (view UCSC Genome Browser custom track) |
| Alignm length: | 608 |
| Alignm identity: | 491 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 35 |
| Conread position: | 133-256 |
| Cow position: | chr21:29036779-29036902 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 657-821 |
| Cow position: | chr21:24172067-24171916 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 26-265 |
| Cow position: | chr23:19867386-19867611 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 57 |
| Conread position: | 276-501 |
| Cow position: | chr23:19867714-19867936 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 193 |
| Conread position: | 450-746 |
| Cow position: | chr23:10630443-10630159 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 230, 78 |
| Conread position: | 69-183 |
| Cow position: | chr25:3081390-3081275 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 174-274 |
| Cow position: | chr25:3081202-3081102 (view UCSC Genome Browser custom track) |
| Alignm length: | 101 |
| Alignm identity: | 90 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 274-443 |
| Cow position: | chr25:3080882-3080713 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 158 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-609 |
| Cow position: | chr25:3080650-3080461 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 607-717 |
| Cow position: | chr25:3080207-3080097 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 99 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 715-807 |
| Cow position: | chr25:3079752-3079660 (view UCSC Genome Browser custom track) |
| Alignm length: | 93 |
| Alignm identity: | 86 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 806-1016 |
| Cow position: | chr25:3079577-3079367 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 849-984 |
| Cow position: | chr29:23707896-23707766 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 53-894 |
| Cow position: | chr3:69406202-69405363 (view UCSC Genome Browser custom track) |
| Alignm length: | 843 |
| Alignm identity: | 725 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 237 |
| Conread position: | 836-988 |
| Cow position: | chr3:69405444-69405295 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 49-232 |
| Cow position: | chr4:38154840-38155027 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 277-792 |
| Cow position: | chr4:38155046-38155541 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 51-570 |
| Cow position: | chr5:22623133-22623664 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 437 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 0 |
| Conread position: | 54-662 |
| Cow position: | chr5:27299845-27300445 (view UCSC Genome Browser custom track) |
| Alignm length: | 610 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 232 |
| Conread position: | 70-1011 |
| Cow position: | chr5:18065452-18064532 (view UCSC Genome Browser custom track) |
| Alignm length: | 949 |
| Alignm identity: | 753 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 274, 82 |
| Conread position: | 822-988 |
| Cow position: | chr5:27300650-27300816 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 142 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 49-988 |
| Cow position: | chr8:36319101-36318183 (view UCSC Genome Browser custom track) |
| Alignm length: | 941 |
| Alignm identity: | 819 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 325 |
| Conread position: | 53-154 |
| Cow position: | chr8:37546163-37546062 (view UCSC Genome Browser custom track) |
| Alignm length: | 102 |
| Alignm identity: | 83 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 54-660 |
| Cow position: | chrX:28869054-28869654 (view UCSC Genome Browser custom track) |
| Alignm length: | 607 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 0 |
| Conread position: | 657-988 |
| Cow position: | chrX:28869935-28870266 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 276 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |