Cow genome map
| Conread name: | Ss1.1-rnca20b_c14.5 |
| Conread position: | 55-649 |
| Cow position: | chr1:51565056-51564462 (view UCSC Genome Browser custom track) |
| Alignm length: | 595 |
| Alignm identity: | 532 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 171-634 |
| Cow position: | chr1:58627698-58627248 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 400 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 108 |
| Conread position: | 682-1095 |
| Cow position: | chr1:51564408-51564001 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 83 |
| Conread position: | 61-632 |
| Cow position: | chr10:13368561-13369132 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 509 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 350-625 |
| Cow position: | chr10:48483627-48483892 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 1-1116 |
| Cow position: | chr11:76537196-76538292 (view UCSC Genome Browser custom track) |
| Alignm length: | 1123 |
| Alignm identity: | 962 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 765, 16 |
| Conread position: | 61-1110 |
| Cow position: | chr13:33595629-33596690 (view UCSC Genome Browser custom track) |
| Alignm length: | 1079 |
| Alignm identity: | 886 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 672, 106 |
| Conread position: | 751-1093 |
| Cow position: | chr17:15029030-15029366 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 143 |
| Conread position: | 1-214 |
| Cow position: | chr18:7606846-7607058 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 7-635 |
| Cow position: | chr18:43620420-43619802 (view UCSC Genome Browser custom track) |
| Alignm length: | 630 |
| Alignm identity: | 528 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 304 |
| Conread position: | 214-295 |
| Cow position: | chr18:7610460-7610541 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 73 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 286-364 |
| Cow position: | chr18:7611792-7611870 (view UCSC Genome Browser custom track) |
| Alignm length: | 79 |
| Alignm identity: | 72 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 357-492 |
| Cow position: | chr18:7617402-7617537 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 129 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 490-1116 |
| Cow position: | chr18:7618283-7618903 (view UCSC Genome Browser custom track) |
| Alignm length: | 635 |
| Alignm identity: | 549 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 280, 268 |
| Conread position: | 1-1116 |
| Cow position: | chr19:5498814-5499915 (view UCSC Genome Browser custom track) |
| Alignm length: | 1125 |
| Alignm identity: | 959 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 18 |
| Conread position: | 55-670 |
| Cow position: | chr24:19255765-19256370 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 534 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 660-1095 |
| Cow position: | chr24:19256503-19256925 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 236 |
| Conread position: | 246-1114 |
| Cow position: | chr25:26859306-26860204 (view UCSC Genome Browser custom track) |
| Alignm length: | 914 |
| Alignm identity: | 711 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 30 |
| Conread position: | 77-384 |
| Cow position: | chr26:16720791-16721096 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 0 |
| Conread position: | 363-636 |
| Cow position: | chr26:16721464-16721728 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 202-638 |
| Cow position: | chr29:36940723-36941148 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 291-580 |
| Cow position: | chr29:21012945-21012658 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 23 |
| Conread position: | 479-685 |
| Cow position: | chr29:18346086-18346291 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 73, 29 |
| Conread position: | 27-635 |
| Cow position: | chr3:68269446-68270051 (view UCSC Genome Browser custom track) |
| Alignm length: | 609 |
| Alignm identity: | 542 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 287, 0 |
| Conread position: | 269-633 |
| Cow position: | chr3:22582087-22582443 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 162 |
| Conread position: | 791-1116 |
| Cow position: | chr4:43268746-43269064 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 107 |
| Conread position: | 116-633 |
| Cow position: | chr5:69526053-69525532 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 430 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 69 |
| Conread position: | 200-623 |
| Cow position: | chr5:55231095-55231499 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 115 |
| Conread position: | 93-635 |
| Cow position: | chr6:3630597-3631139 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 493 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-636 |
| Cow position: | chr7:12474719-12474091 (view UCSC Genome Browser custom track) |
| Alignm length: | 640 |
| Alignm identity: | 553 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 198-622 |
| Cow position: | chr7:48859134-48858717 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 112 |
| Conread position: | 150-1030 |
| Cow position: | chr8:27028468-27029335 (view UCSC Genome Browser custom track) |
| Alignm length: | 904 |
| Alignm identity: | 695 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 51 |
| Conread position: | 186-644 |
| Cow position: | chr8:27958102-27958557 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 417 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 132 |
| Conread position: | 17-1116 |
| Cow position: | chrX:281553-282644 (view UCSC Genome Browser custom track) |
| Alignm length: | 1119 |
| Alignm identity: | 940 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 761, 72 |