Cow genome map


           Conread name:
           Ss1.1-rnep14c_j20.5
        

               Conread position:
               1-435
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 401
               

               Conread position:
               1-462
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               309
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               140, 115
               

               Conread position:
               1-479
               

               Cow position:
               
               

               Alignm length:
               494
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 55
               

               Conread position:
               1-479
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               325
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               87, 109
               

               Conread position:
               1-479
               

               Cow position:
               
               

               Alignm length:
               505
               

               Alignm identity:
               376
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 57
               

               Conread position:
               1-485
               

               Cow position:
               
               

               Alignm length:
               514
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 38
               

               Conread position:
               1-535
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               434
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 326
               

               Conread position:
               2-336
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 336
               

               Conread position:
               2-479
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 134
               

               Conread position:
               2-535
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 113
               

               Conread position:
               3-479
               

               Cow position:
               
               

               Alignm length:
               488
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 291
               

               Conread position:
               5-462
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               5-462
               

               Cow position:
               
               

               Alignm length:
               479
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 55
               

               Conread position:
               5-535
               

               Cow position:
               
               

               Alignm length:
               548
               

               Alignm identity:
               442
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 53
               

               Conread position:
               5-535
               

               Cow position:
               
               

               Alignm length:
               549
               

               Alignm identity:
               385
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 34
               

               Conread position:
               31-535
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 7
               

               Conread position:
               32-305
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 115
               

               Conread position:
               32-437
               

               Cow position:
               
               

               Alignm length:
               428
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               139, 297
               

               Conread position:
               32-462
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               90, 74
               

               Conread position:
               32-462
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 85
               

               Conread position:
               34-479
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 24
               

               Conread position:
               34-479
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               34-535
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 54
               

               Conread position:
               61-441
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               267
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               61, 56
               

               Conread position:
               64-479
               

               Cow position:
               
               

               Alignm length:
               417
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               64-535
               

               Cow position:
               
               

               Alignm length:
               500
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               83-262
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               127-305
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               148
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               127-485
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 61
               

               Conread position:
               129-441
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               220
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               69, 133
               

               Conread position:
               154-535
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 132
               

               Conread position:
               229-535
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               100, 41
               

               Conread position:
               280-479
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               164, 147
               

               Conread position:
               282-428
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               130
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               314-537
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               37, 55
               

               Conread position:
               430-535
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               398-535
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               420-535
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               429-535
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               59, 0