Cow genome map


           Conread name:
           Ss1.1-rpgl03_o16.5
        

               Conread position:
               42-176
               

               Cow position:
               chr10:56980960-56980827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 27
               

               Conread position:
               28-176
               

               Cow position:
               chr13:43931384-43931235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               132
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               42, 53
               

               Conread position:
               39-177
               

               Cow position:
               chr13:58385543-58385684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               28-159
               

               Cow position:
               chr16:56453736-56453599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               25, 132
               

               Conread position:
               69-176
               

               Cow position:
               chr16:34181428-34181319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               58-176
               

               Cow position:
               chr19:37846941-37846823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               121
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               66-170
               

               Cow position:
               chr2:3162790-3162684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               13, 84
               

               Conread position:
               66-176
               

               Cow position:
               chr20:34138580-34138470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               70-176
               

               Cow position:
               chr25:4913934-4914040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               107
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               29-176
               

               Cow position:
               chr3:68091431-68091286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               197-624
               

               Cow position:
               chr7:17314752-17315194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 24
               

               Conread position:
               29-176
               

               Cow position:
               chr9:49618057-49617909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               41, 52