Cow genome map

Conread name: Ss1.1-rpigcf0_021306.5

Conread position: 16-201
Cow position: chr1:95062796-95062978 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 137
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 33-286
Cow position: chr1:16389728-16389969 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 189
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 40, 142

Conread position: 42-191
Cow position: chr1:91025898-91026045 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 42-201
Cow position: chr1:81112792-81112636 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 123
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 122, 33

Conread position: 42-209
Cow position: chr1:84245887-84245721 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 125, 33

Conread position: 42-218
Cow position: chr1:71964999-71964826 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 42-224
Cow position: chr1:14305090-14305263 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 42-227
Cow position: chr1:89096721-89096536 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 140
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 152, 33

Conread position: 42-270
Cow position: chr1:17133707-17133933 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 172
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 72, 33

Conread position: 42-281
Cow position: chr1:578962-578726 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 184
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 103, 35

Conread position: 42-282
Cow position: chr1:19555192-19554954 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-283
Cow position: chr1:43584117-43584357 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-304
Cow position: chr1:43223688-43223431 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 27

Conread position: 43-318
Cow position: chr1:3266076-3266349 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 182, 29

Conread position: 44-214
Cow position: chr1:44097257-44097425 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 154, 31

Conread position: 45-192
Cow position: chr1:32496063-32496209 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 45-287
Cow position: chr1:1064482-1064718 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 32

Conread position: 45-304
Cow position: chr1:91972670-91972415 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 45-330
Cow position: chr1:51822582-51822302 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 46-290
Cow position: chr1:92045397-92045639 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 29

Conread position: 62-197
Cow position: chr1:76595942-76596074 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 75-286
Cow position: chr1:27875788-27875999 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 3e-40
Alignm gaps (pig, cow): 98, 104

Conread position: 78-226
Cow position: chr1:91777806-91777955 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 139, 111

Conread position: 79-282
Cow position: chr1:45880010-45879807 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 152
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 0, 0

Conread position: 101-317
Cow position: chr1:31519103-31518890 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 180, 14

Conread position: 117-276
Cow position: chr1:82405772-82405929 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 36

Conread position: 117-315
Cow position: chr1:102649793-102649987 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 12, 36

Conread position: 125-333
Cow position: chr1:60503047-60502826 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 156, 81

Conread position: 126-287
Cow position: chr1:73085883-73085721 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 151, 0

Conread position: 128-251
Cow position: chr1:91852473-91852351 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 128-276
Cow position: chr1:9277906-9278049 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 128-276
Cow position: chr1:91669028-91669177 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 103, 0

Conread position: 128-281
Cow position: chr1:67395697-67395846 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 128-281
Cow position: chr1:79171081-79170928 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 128-282
Cow position: chr1:84793504-84793350 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 128-304
Cow position: chr1:6482466-6482293 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr1:17654348-17654176 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 112, 55

Conread position: 128-304
Cow position: chr1:49797717-49797545 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 90, 36

Conread position: 128-304
Cow position: chr1:71107810-71107980 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 128-319
Cow position: chr1:40204082-40204277 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 145
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 128-331
Cow position: chr1:57533448-57533657 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 144, 24

Conread position: 128-332
Cow position: chr1:84314298-84314092 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 159, 0

Conread position: 132-275
Cow position: chr1:45987955-45987818 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 135-304
Cow position: chr1:27972721-27972888 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 149, 131

Conread position: 169-297
Cow position: chr1:81152391-81152264 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 174-304
Cow position: chr1:8941773-8941643 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 42-224
Cow position: chr10:48354917-48355087 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 21, 0

Conread position: 42-286
Cow position: chr10:68351668-68351909 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 42-289
Cow position: chr10:8690236-8689988 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 198, 33

Conread position: 42-304
Cow position: chr10:17077054-17076802 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 197
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 33

Conread position: 42-330
Cow position: chr10:28021711-28021994 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 197
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 197, 34

Conread position: 45-286
Cow position: chr10:31820659-31820876 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 32, 0

Conread position: 45-301
Cow position: chr10:36036160-36035905 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 31

Conread position: 59-282
Cow position: chr10:32324295-32324074 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 177
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 0

Conread position: 84-324
Cow position: chr10:8231250-8231484 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 154

Conread position: 96-302
Cow position: chr10:26932304-26932510 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 192, 94

Conread position: 106-269
Cow position: chr10:15515579-15515418 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 15, 0

Conread position: 126-304
Cow position: chr10:7745843-7745668 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 148, 0

Conread position: 127-315
Cow position: chr10:10264494-10264681 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 71, 25

Conread position: 128-247
Cow position: chr10:49707574-49707455 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 128-274
Cow position: chr10:58741038-58740893 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 24, 0

Conread position: 128-275
Cow position: chr10:24984602-24984459 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 128-276
Cow position: chr10:11417704-11417557 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 118, 0

Conread position: 128-281
Cow position: chr10:67866399-67866552 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 128-336
Cow position: chr10:18162825-18162619 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 157, 58

Conread position: 132-256
Cow position: chr10:27736571-27736695 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 140-279
Cow position: chr10:16721839-16721700 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 135, 128

Conread position: 140-287
Cow position: chr10:7726202-7726055 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 140-301
Cow position: chr10:27183600-27183758 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 142-286
Cow position: chr10:48640324-48640468 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 36, 20

Conread position: 145-286
Cow position: chr10:19593754-19593615 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 145-299
Cow position: chr10:67698833-67698677 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 50, 5

Conread position: 39-209
Cow position: chr11:61286748-61286918 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 23, 38

Conread position: 42-188
Cow position: chr11:75202172-75202031 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 42-191
Cow position: chr11:5251778-5251925 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 32, 0

Conread position: 42-191
Cow position: chr11:36901189-36901337 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 42-197
Cow position: chr11:11683049-11682897 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 42-209
Cow position: chr11:5188497-5188333 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 42-209
Cow position: chr11:18480618-18480777 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 42-230
Cow position: chr11:32601025-32600839 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 96, 33

Conread position: 42-277
Cow position: chr11:48662621-48662855 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 77, 31

Conread position: 42-284
Cow position: chr11:64841709-64841483 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 42-285
Cow position: chr11:42471737-42471979 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 87, 33

Conread position: 42-286
Cow position: chr11:16197570-16197796 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 177
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 42-298
Cow position: chr11:37032142-37032398 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 33

Conread position: 42-298
Cow position: chr11:82102850-82103101 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 33

Conread position: 42-304
Cow position: chr11:73450298-73450554 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 21

Conread position: 42-332
Cow position: chr11:75260204-75259911 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 30

Conread position: 45-191
Cow position: chr11:5144224-5144367 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 112, 30

Conread position: 45-191
Cow position: chr11:6605084-6604939 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 45-196
Cow position: chr11:17706780-17706631 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 121
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 31, 0

Conread position: 45-282
Cow position: chr11:55010737-55010973 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 45-301
Cow position: chr11:64888258-64887999 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 32

Conread position: 45-304
Cow position: chr11:37916040-37915784 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 107

Conread position: 45-339
Cow position: chr11:2421463-2421169 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 174, 30

Conread position: 52-304
Cow position: chr11:40620833-40620587 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 180
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 236, 16

Conread position: 65-286
Cow position: chr11:32777036-32777252 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 73, 0

Conread position: 84-315
Cow position: chr11:26368301-26368074 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 170
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 204, 41

Conread position: 114-286
Cow position: chr11:51329677-51329508 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 118-329
Cow position: chr11:60204572-60204364 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 9, 47

Conread position: 128-251
Cow position: chr11:82709595-82709476 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 128-272
Cow position: chr11:85710492-85710636 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 22, 17

Conread position: 128-279
Cow position: chr11:8476764-8476915 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 128-281
Cow position: chr11:30544675-30544527 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 128-281
Cow position: chr11:35428542-35428695 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 24

Conread position: 128-281
Cow position: chr11:61518708-61518861 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 128-286
Cow position: chr11:74535238-74535084 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 61, 0

Conread position: 128-296
Cow position: chr11:38643482-38643316 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 128
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 122, 133

Conread position: 128-304
Cow position: chr11:76939365-76939194 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr11:80806996-80807170 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 125, 24

Conread position: 128-330
Cow position: chr11:4593078-4593286 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 157
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 144, 135

Conread position: 128-330
Cow position: chr11:36239257-36239458 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 147
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 185, 161

Conread position: 132-281
Cow position: chr11:70794806-70794955 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 20

Conread position: 132-283
Cow position: chr11:68981907-68982058 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 139-304
Cow position: chr11:4396366-4396526 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 13

Conread position: 140-285
Cow position: chr11:5615811-5615958 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 140-286
Cow position: chr11:28243056-28242912 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 0

Conread position: 141-342
Cow position: chr11:5161860-5161656 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 142, 152

Conread position: 142-324
Cow position: chr11:37008403-37008586 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 154, 181

Conread position: 151-330
Cow position: chr11:44149194-44149009 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 41-286
Cow position: chr12:19382883-19383128 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 186
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 14, 34

Conread position: 42-213
Cow position: chr12:28545433-28545270 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 29, 0

Conread position: 42-225
Cow position: chr12:30922311-30922129 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 42-282
Cow position: chr12:1435699-1435461 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 174
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 33, 0

Conread position: 42-282
Cow position: chr12:24176716-24176487 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 184
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr12:19189849-19189615 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 42-286
Cow position: chr12:24544904-24545147 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-298
Cow position: chr12:15383179-15383432 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 27

Conread position: 43-304
Cow position: chr12:12175819-12175550 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 191
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 26, 158

Conread position: 45-282
Cow position: chr12:36596673-36596907 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 0

Conread position: 46-286
Cow position: chr12:12010248-12010481 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 182
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 82-304
Cow position: chr12:13025035-13025256 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 159
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 204, 112

Conread position: 84-244
Cow position: chr12:30190055-30189898 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 84-304
Cow position: chr12:4475163-4475380 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 176

Conread position: 84-315
Cow position: chr12:39318041-39318268 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 171
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 204, 106

Conread position: 109-266
Cow position: chr12:5964093-5963937 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 81, 0

Conread position: 117-304
Cow position: chr12:10787608-10787422 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 175, 0

Conread position: 124-304
Cow position: chr12:44477006-44476833 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 128-273
Cow position: chr12:33561786-33561641 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 128-275
Cow position: chr12:10353942-10354092 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 46, 0

Conread position: 128-281
Cow position: chr12:11934745-11934596 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 128-281
Cow position: chr12:25434090-25433942 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 128-282
Cow position: chr12:4309283-4309438 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 137, 85

Conread position: 128-304
Cow position: chr12:12025506-12025331 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 156, 140

Conread position: 131-282
Cow position: chr12:44952523-44952375 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 59, 0

Conread position: 138-304
Cow position: chr12:45178425-45178259 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 155

Conread position: 140-276
Cow position: chr12:3588375-3588511 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 140-276
Cow position: chr12:6068919-6068783 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 140-281
Cow position: chr12:27729858-27729717 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 140-298
Cow position: chr12:30271319-30271165 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 55, 18

Conread position: 145-272
Cow position: chr12:6268438-6268565 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 151-304
Cow position: chr12:15743417-15743264 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 132, 142

Conread position: 175-286
Cow position: chr12:39640258-39640147 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 176-287
Cow position: chr12:18131853-18131963 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 41-254
Cow position: chr13:33766881-33766667 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 28, 119

Conread position: 41-332
Cow position: chr13:16045706-16045990 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 210
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 87, 35

Conread position: 42-224
Cow position: chr13:43360414-43360592 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 33, 0

Conread position: 42-248
Cow position: chr13:41843315-41843111 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 42-273
Cow position: chr13:61030891-61031122 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 156, 33

Conread position: 42-285
Cow position: chr13:16571011-16570777 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr13:19546307-19546547 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 27, 104

Conread position: 42-315
Cow position: chr13:52282202-52282462 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 198
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 17, 0

Conread position: 42-330
Cow position: chr13:53161412-53161704 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 210
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 210, 33

Conread position: 45-226
Cow position: chr13:61895085-61894905 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 74, 30

Conread position: 45-352
Cow position: chr13:31494942-31494630 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 230
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 13, 58

Conread position: 53-315
Cow position: chr13:19534597-19534339 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 21

Conread position: 75-194
Cow position: chr13:19282022-19282140 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 114, 0

Conread position: 84-276
Cow position: chr13:8617210-8617019 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 149
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 53, 42

Conread position: 87-285
Cow position: chr13:5274294-5274092 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 154
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 72, 108

Conread position: 110-317
Cow position: chr13:54779072-54779277 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 9, 41

Conread position: 114-304
Cow position: chr13:43703393-43703206 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 140, 0

Conread position: 128-272
Cow position: chr13:12765939-12766083 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 128-273
Cow position: chr13:2335894-2336036 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 128-273
Cow position: chr13:10798711-10798567 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 128-281
Cow position: chr13:1234382-1234535 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 128-281
Cow position: chr13:49536861-49537009 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 114, 0

Conread position: 128-282
Cow position: chr13:26182821-26182974 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 110
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 143, 0

Conread position: 128-283
Cow position: chr13:20704733-20704582 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 141, 99

Conread position: 128-304
Cow position: chr13:13760395-13760570 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 55, 24

Conread position: 128-304
Cow position: chr13:15702630-15702803 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 137
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 153, 135

Conread position: 128-304
Cow position: chr13:27108803-27108628 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 153, 24

Conread position: 128-330
Cow position: chr13:822698-822904 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 143
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 24

Conread position: 128-330
Cow position: chr13:17170249-17170029 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 149, 0

Conread position: 129-329
Cow position: chr13:52218014-52218213 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 167, 23

Conread position: 132-257
Cow position: chr13:12319683-12319558 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 132-281
Cow position: chr13:54325860-54326010 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 132-329
Cow position: chr13:25812930-25812727 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 152
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 163, 20

Conread position: 135-356
Cow position: chr13:18318204-18317981 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 160
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 60, 38

Conread position: 141-301
Cow position: chr13:17882062-17882220 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 156, 42

Conread position: 175-304
Cow position: chr13:52442218-52442347 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 106, 119

Conread position: 42-192
Cow position: chr14:12337505-12337359 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 42-197
Cow position: chr14:25934649-25934489 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 33

Conread position: 42-198
Cow position: chr14:24445610-24445457 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 33, 0

Conread position: 42-208
Cow position: chr14:9229067-9228902 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 147, 0

Conread position: 42-209
Cow position: chr14:24206479-24206645 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 120
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 120, 33

Conread position: 42-212
Cow position: chr14:8033103-8032939 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 42-218
Cow position: chr14:16813963-16813787 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 50, 26

Conread position: 42-257
Cow position: chr14:7950878-7950672 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr14:10082544-10082785 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 27, 0

Conread position: 42-301
Cow position: chr14:7940167-7939908 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 31

Conread position: 60-300
Cow position: chr14:121604-121373 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 228, 14

Conread position: 75-287
Cow position: chr14:32920832-32920622 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 156
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 115, 0

Conread position: 77-275
Cow position: chr14:26474006-26473810 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 159
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 85-350
Cow position: chr14:37115988-37116248 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 194
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 203, 43

Conread position: 116-329
Cow position: chr14:5495441-5495226 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 11, 37

Conread position: 128-271
Cow position: chr14:1786599-1786742 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 128-276
Cow position: chr14:12339751-12339604 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 128-281
Cow position: chr14:15673952-15673804 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-281
Cow position: chr14:40016797-40016951 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 112, 0

Conread position: 128-283
Cow position: chr14:11963242-11963397 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 139, 26

Conread position: 128-287
Cow position: chr14:19813695-19813538 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 127, 0

Conread position: 128-287
Cow position: chr14:21555261-21555101 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 149, 0

Conread position: 129-304
Cow position: chr14:40026006-40025836 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 154, 21

Conread position: 132-330
Cow position: chr14:17144888-17144689 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 146, 20

Conread position: 135-300
Cow position: chr14:15828829-15828670 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 140-329
Cow position: chr14:24935237-24935043 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 149
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 138, 12

Conread position: 142-272
Cow position: chr14:3751849-3751979 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 142-282
Cow position: chr14:22912684-22912547 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 48, 0

Conread position: 166-283
Cow position: chr14:15028038-15027921 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 27-285
Cow position: chr15:45237070-45237327 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 0

Conread position: 41-327
Cow position: chr15:45618407-45618139 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 214
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 247, 9

Conread position: 42-209
Cow position: chr15:10314050-10314214 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 42-282
Cow position: chr15:39499974-39499732 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 34

Conread position: 42-324
Cow position: chr15:15214103-15214385 (view UCSC Genome Browser custom track)
Alignm length: 285
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 33

Conread position: 45-286
Cow position: chr15:26127633-26127394 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 180
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 30, 0

Conread position: 45-357
Cow position: chr15:12863914-12864220 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 252, 30

Conread position: 49-286
Cow position: chr15:37364908-37365138 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 204, 26

Conread position: 56-304
Cow position: chr15:36525148-36524899 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 172
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 102, 18

Conread position: 59-298
Cow position: chr15:27867764-27867529 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 175
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 74, 16

Conread position: 63-335
Cow position: chr15:43561023-43561294 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 220, 12

Conread position: 75-304
Cow position: chr15:8453495-8453273 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 171
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 104, 47

Conread position: 124-281
Cow position: chr15:18692433-18692276 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 124
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 126-330
Cow position: chr15:45376324-45376538 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 108, 31

Conread position: 128-262
Cow position: chr15:9681333-9681468 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 128-281
Cow position: chr15:25365257-25365409 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-282
Cow position: chr15:15753099-15752945 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 120
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 128-294
Cow position: chr15:13502358-13502518 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 134
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 156, 26

Conread position: 128-298
Cow position: chr15:38381503-38381667 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 128-304
Cow position: chr15:45040804-45040630 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 42, 147

Conread position: 130-263
Cow position: chr15:3702517-3702650 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 132-301
Cow position: chr15:52447008-52447177 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 140-304
Cow position: chr15:51036477-51036635 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 154, 12

Conread position: 152-330
Cow position: chr15:16598688-16598503 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 105, 0

Conread position: 42-197
Cow position: chr16:27974462-27974617 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 110, 33

Conread position: 42-209
Cow position: chr16:26065817-26065651 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 33

Conread position: 42-240
Cow position: chr16:5249577-5249382 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr16:32884832-32884585 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 33

Conread position: 42-286
Cow position: chr16:45572974-45572730 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 33

Conread position: 42-296
Cow position: chr16:15878825-15879076 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 49, 113

Conread position: 43-214
Cow position: chr16:8786556-8786726 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 119, 30

Conread position: 43-321
Cow position: chr16:49898440-49898713 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 80, 30

Conread position: 45-168
Cow position: chr16:32173517-32173398 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 45-282
Cow position: chr16:33426716-33426480 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 45-323
Cow position: chr16:33595085-33594807 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 30

Conread position: 46-272
Cow position: chr16:15126110-15125892 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 175
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 29, 0

Conread position: 55-331
Cow position: chr16:6160232-6160508 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 9

Conread position: 58-286
Cow position: chr16:30800284-30800059 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 0

Conread position: 60-338
Cow position: chr16:52928358-52928629 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 228, 9

Conread position: 75-285
Cow position: chr16:54011594-54011395 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 87, 154

Conread position: 75-304
Cow position: chr16:9574880-9575113 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 43, 222

Conread position: 75-317
Cow position: chr16:24571228-24571466 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 175
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 233, 82

Conread position: 76-282
Cow position: chr16:33129260-33129459 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 9e-35
Alignm gaps (pig, cow): 29, 0

Conread position: 84-293
Cow position: chr16:43501790-43501993 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 166
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 193, 9

Conread position: 84-298
Cow position: chr16:19640191-19639975 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 74, 40

Conread position: 85-299
Cow position: chr16:46403916-46403710 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 127, 48

Conread position: 87-254
Cow position: chr16:30712501-30712666 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 158, 34

Conread position: 108-286
Cow position: chr16:9252533-9252714 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 54, 172

Conread position: 118-304
Cow position: chr16:16435989-16436172 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 9, 41

Conread position: 118-331
Cow position: chr16:16429842-16430059 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 9, 208

Conread position: 125-276
Cow position: chr16:34760556-34760706 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 146, 0

Conread position: 128-239
Cow position: chr16:6683896-6684007 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 128-298
Cow position: chr16:42046898-42046729 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 154, 0

Conread position: 128-301
Cow position: chr16:6087368-6087543 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 144, 0

Conread position: 128-304
Cow position: chr16:6083790-6083966 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 128-304
Cow position: chr16:26791249-26791066 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 51, 172

Conread position: 128-315
Cow position: chr16:33986199-33986386 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 138
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 180, 153

Conread position: 128-344
Cow position: chr16:39220205-39219987 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 155, 0

Conread position: 129-297
Cow position: chr16:11810897-11810730 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 153, 0

Conread position: 129-344
Cow position: chr16:12525698-12525919 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 158
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 66, 23

Conread position: 132-315
Cow position: chr16:9569823-9569647 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 140-281
Cow position: chr16:56872144-56872284 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 140-282
Cow position: chr16:43165010-43164868 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 141-304
Cow position: chr16:35035803-35035639 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 143

Conread position: 153-331
Cow position: chr16:41581532-41581335 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 187-299
Cow position: chr16:32171696-32171584 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 41-209
Cow position: chr17:25546405-25546233 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 126, 34

Conread position: 41-286
Cow position: chr17:22043045-22043285 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 187
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 79, 35

Conread position: 42-171
Cow position: chr17:892078-891950 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 42-191
Cow position: chr17:5348408-5348262 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 23, 0

Conread position: 42-197
Cow position: chr17:1757095-1756943 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 42-197
Cow position: chr17:42337576-42337733 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 78, 33

Conread position: 42-209
Cow position: chr17:17642033-17641867 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 16, 34

Conread position: 42-224
Cow position: chr17:17449341-17449160 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 138
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 36, 0

Conread position: 42-225
Cow position: chr17:33548012-33548192 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 22, 34

Conread position: 42-237
Cow position: chr17:22581656-22581847 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 36, 0

Conread position: 42-286
Cow position: chr17:38875022-38874778 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 33

Conread position: 42-328
Cow position: chr17:21613551-21613839 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 51, 33

Conread position: 43-197
Cow position: chr17:1730081-1730233 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 34

Conread position: 45-195
Cow position: chr17:6762964-6763112 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 45-197
Cow position: chr17:21460831-21460980 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 30, 0

Conread position: 45-330
Cow position: chr17:23564855-23565138 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 30

Conread position: 75-286
Cow position: chr17:12739956-12739745 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 163
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 169, 62

Conread position: 75-286
Cow position: chr17:25557082-25556871 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 88-276
Cow position: chr17:22511464-22511651 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 144
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 114, 34

Conread position: 96-276
Cow position: chr17:6841434-6841261 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 140
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 58, 0

Conread position: 110-286
Cow position: chr17:44533175-44533001 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 9, 50

Conread position: 117-281
Cow position: chr17:19975580-19975420 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 10, 34

Conread position: 117-328
Cow position: chr17:7329563-7329354 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 10, 35

Conread position: 119-304
Cow position: chr17:26222541-26222359 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 159, 54

Conread position: 127-286
Cow position: chr17:13381833-13381989 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 128-272
Cow position: chr17:25190615-25190473 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 128-277
Cow position: chr17:3764462-3764317 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 128-281
Cow position: chr17:28083985-28083836 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 128-287
Cow position: chr17:21480085-21479926 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 164-281
Cow position: chr17:6881096-6880979 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 42-261
Cow position: chr18:35508246-35508456 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 33, 0

Conread position: 42-327
Cow position: chr18:46864154-46864436 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 197
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 20, 124

Conread position: 45-249
Cow position: chr18:49899132-49899333 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 161
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 31, 0

Conread position: 45-252
Cow position: chr18:38329822-38329617 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 163
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 32, 0

Conread position: 45-273
Cow position: chr18:23431045-23431261 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 178
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 150, 30

Conread position: 45-286
Cow position: chr18:11234695-11234466 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 165, 30

Conread position: 52-360
Cow position: chr18:42288569-42288882 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 225
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 187, 20

Conread position: 59-304
Cow position: chr18:2783171-2783421 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 176
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 105, 11

Conread position: 75-286
Cow position: chr18:4503766-4503976 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 119, 0

Conread position: 84-235
Cow position: chr18:43820695-43820544 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 74, 107

Conread position: 84-301
Cow position: chr18:10050976-10051188 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 167
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 11, 0

Conread position: 84-313
Cow position: chr18:1387448-1387227 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 88, 0

Conread position: 116-229
Cow position: chr18:8111052-8111166 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 125-282
Cow position: chr18:47274920-47275072 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 104, 0

Conread position: 128-276
Cow position: chr18:56036844-56036993 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 37, 0

Conread position: 128-281
Cow position: chr18:45109652-45109800 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 128-282
Cow position: chr18:32048012-32048168 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 87, 0

Conread position: 128-304
Cow position: chr18:22652379-22652555 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 153, 166

Conread position: 128-331
Cow position: chr18:48219265-48219063 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 153
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 155, 176

Conread position: 190-330
Cow position: chr18:39080778-39080635 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 0

Conread position: 38-222
Cow position: chr19:33735077-33734894 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 136
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 39, 83

Conread position: 42-229
Cow position: chr19:14544143-14543958 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 145
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 35, 0

Conread position: 42-237
Cow position: chr19:2602567-2602382 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 42-276
Cow position: chr19:48049791-48049557 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 129
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 81, 33

Conread position: 42-286
Cow position: chr19:18937572-18937814 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 212, 33

Conread position: 42-286
Cow position: chr19:21747395-21747139 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 183
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 64, 13

Conread position: 43-304
Cow position: chr19:24244030-24243787 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 184
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 205, 16

Conread position: 45-338
Cow position: chr19:2772087-2771808 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 211
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 260, 30

Conread position: 47-277
Cow position: chr19:22688619-22688847 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 169
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 29, 108

Conread position: 82-304
Cow position: chr19:33517517-33517731 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 160
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 206, 108

Conread position: 83-253
Cow position: chr19:26678467-26678297 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 79, 107

Conread position: 83-286
Cow position: chr19:26950683-26950887 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 9e-25
Alignm gaps (pig, cow): 126, 22

Conread position: 128-280
Cow position: chr19:25992085-25992238 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 128-281
Cow position: chr19:25540470-25540318 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 131, 0

Conread position: 128-283
Cow position: chr19:36464783-36464633 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 128-283
Cow position: chr19:39626358-39626513 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 128-315
Cow position: chr19:51619216-51619402 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 155, 22

Conread position: 128-327
Cow position: chr19:49863838-49863634 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 150, 44

Conread position: 128-327
Cow position: chr19:54835885-54835680 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 150, 34

Conread position: 128-330
Cow position: chr19:6442970-6443187 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 52, 0

Conread position: 135-304
Cow position: chr19:7582487-7582654 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 146, 17

Conread position: 139-301
Cow position: chr19:9881446-9881609 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 122
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 149, 51

Conread position: 157-286
Cow position: chr19:9535764-9535894 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 96, 33

Conread position: 175-282
Cow position: chr19:18655859-18655966 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 175-300
Cow position: chr19:19012997-19012874 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 176-315
Cow position: chr19:398099-397960 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 118

Conread position: 179-298
Cow position: chr19:23039715-23039597 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 105, 114

Conread position: 14-188
Cow position: chr2:70829521-70829692 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 129
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 16, 0

Conread position: 37-274
Cow position: chr2:35995047-35994809 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 175
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 39, 26

Conread position: 42-197
Cow position: chr2:66981904-66982054 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 42-202
Cow position: chr2:57449330-57449173 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 97, 32

Conread position: 42-208
Cow position: chr2:30639443-30639604 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 42-224
Cow position: chr2:45308725-45308905 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 33, 0

Conread position: 42-237
Cow position: chr2:45007825-45007627 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 36, 133

Conread position: 42-286
Cow position: chr2:39580292-39580065 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 183
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr2:40474014-40473772 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr2:76048136-76048376 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 179
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 8, 34

Conread position: 42-298
Cow position: chr2:44204243-44203988 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 33

Conread position: 42-299
Cow position: chr2:39790334-39790590 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 198, 33

Conread position: 42-301
Cow position: chr2:76037761-76037509 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-305
Cow position: chr2:6938851-6939115 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 234, 33

Conread position: 42-339
Cow position: chr2:23607960-23607659 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 25

Conread position: 42-339
Cow position: chr2:39796666-39796375 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 42

Conread position: 43-209
Cow position: chr2:86527782-86527949 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 67, 34

Conread position: 44-264
Cow position: chr2:46267170-46267390 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 172
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 196, 9

Conread position: 54-191
Cow position: chr2:46008734-46008599 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 62-286
Cow position: chr2:65780664-65780448 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 201, 12

Conread position: 68-318
Cow position: chr2:5483545-5483783 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 183
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 220, 90

Conread position: 75-197
Cow position: chr2:74693225-74693105 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 75-300
Cow position: chr2:2072994-2072767 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 165
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 26, 89

Conread position: 86-296
Cow position: chr2:74897185-74896972 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 158
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 169, 103

Conread position: 91-298
Cow position: chr2:19236994-19237198 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 197, 35

Conread position: 102-286
Cow position: chr2:82928747-82928929 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 7, 0

Conread position: 128-276
Cow position: chr2:66060715-66060572 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 128-276
Cow position: chr2:69915557-69915700 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 48, 24

Conread position: 128-281
Cow position: chr2:15996898-15997050 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr2:71501737-71501560 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 35, 79

Conread position: 128-315
Cow position: chr2:71235207-71235389 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 48, 24

Conread position: 128-323
Cow position: chr2:74180338-74180144 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 99, 0

Conread position: 128-327
Cow position: chr2:46322123-46322322 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 153, 24

Conread position: 128-330
Cow position: chr2:48975376-48975168 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 156
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 106, 23

Conread position: 128-330
Cow position: chr2:69085926-69086126 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 157, 24

Conread position: 128-359
Cow position: chr2:5852202-5852427 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 135, 0

Conread position: 130-281
Cow position: chr2:82419222-82419374 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 110, 0

Conread position: 132-337
Cow position: chr2:12302928-12303139 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 153
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 110, 146

Conread position: 139-282
Cow position: chr2:20865893-20866036 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 140-276
Cow position: chr2:3436838-3436973 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 61, 0

Conread position: 145-286
Cow position: chr2:82137329-82137188 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 116
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 149-334
Cow position: chr2:47178309-47178121 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 136, 66

Conread position: 175-281
Cow position: chr2:44356568-44356674 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 85
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 176-323
Cow position: chr2:26508315-26508167 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 108, 117

Conread position: 205-330
Cow position: chr2:46267358-46267484 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 91, 0

Conread position: 42-240
Cow position: chr20:22402046-22402246 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 157
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 178, 33

Conread position: 42-251
Cow position: chr20:37345769-37345561 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 31, 0

Conread position: 42-294
Cow position: chr20:17306496-17306752 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 192
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 27, 104

Conread position: 43-330
Cow position: chr20:35704758-35705047 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 233, 30

Conread position: 45-253
Cow position: chr20:39441185-39440986 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 45-323
Cow position: chr20:34958583-34958858 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 211
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 72, 23

Conread position: 59-253
Cow position: chr20:31050795-31050604 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 18, 71

Conread position: 73-197
Cow position: chr20:19620738-19620862 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 35, 117

Conread position: 76-299
Cow position: chr20:19466556-19466783 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 71, 101

Conread position: 128-276
Cow position: chr20:22034794-22034940 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 128-286
Cow position: chr20:35609926-35610084 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 128-287
Cow position: chr20:29588406-29588252 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 128-289
Cow position: chr20:41972165-41972325 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 0

Conread position: 128-300
Cow position: chr20:40157502-40157337 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr20:33201908-33202083 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 153, 0

Conread position: 128-330
Cow position: chr20:31189528-31189314 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 144, 191

Conread position: 128-330
Cow position: chr20:33895168-33895372 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 148
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 169, 24

Conread position: 128-344
Cow position: chr20:17918906-17918682 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 157
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 150, 48

Conread position: 132-330
Cow position: chr20:5826292-5826097 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 146, 107

Conread position: 140-330
Cow position: chr20:12546197-12546398 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 146-281
Cow position: chr20:5897128-5896993 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 175-282
Cow position: chr20:34296332-34296439 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 182-281
Cow position: chr20:6905735-6905636 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 82
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 42-208
Cow position: chr21:6134831-6134669 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 42-209
Cow position: chr21:7074354-7074188 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 33

Conread position: 42-272
Cow position: chr21:13391351-13391568 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 173
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 42-287
Cow position: chr21:1598067-1597827 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 207, 33

Conread position: 42-304
Cow position: chr21:24428952-24429214 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 33

Conread position: 43-286
Cow position: chr21:26575886-26576124 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 47-169
Cow position: chr21:4510245-4510124 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 47-304
Cow position: chr21:2988545-2988292 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 149, 28

Conread position: 59-191
Cow position: chr21:42475402-42475274 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 59-359
Cow position: chr21:2523383-2523684 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 16

Conread position: 75-236
Cow position: chr21:22513144-22512987 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 75-299
Cow position: chr21:3789992-3789760 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 180
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 195, 0

Conread position: 101-286
Cow position: chr21:2854688-2854495 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 140, 15

Conread position: 128-272
Cow position: chr21:41506086-41505943 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 128-275
Cow position: chr21:9293454-9293307 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 48, 39

Conread position: 128-279
Cow position: chr21:36641103-36641254 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 117, 31

Conread position: 128-281
Cow position: chr21:39277481-39277630 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 128-282
Cow position: chr21:8913265-8913112 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 128-290
Cow position: chr21:8907088-8906925 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 156, 0

Conread position: 128-297
Cow position: chr21:11734935-11734764 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 141, 157

Conread position: 128-297
Cow position: chr21:15642353-15642516 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 128-297
Cow position: chr21:41442953-41443115 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr21:9975429-9975257 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 155, 30

Conread position: 128-304
Cow position: chr21:41838288-41838464 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 128-315
Cow position: chr21:10838401-10838215 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 135
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 184, 0

Conread position: 128-330
Cow position: chr21:30090562-30090351 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 161
Alignm E-value: 8e-35
Alignm gaps (pig, cow): 112, 176

Conread position: 132-281
Cow position: chr21:39251178-39251325 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 37, 30

Conread position: 132-282
Cow position: chr21:39736414-39736564 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 132-304
Cow position: chr21:22054619-22054441 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 135-304
Cow position: chr21:21565097-21565262 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 140-281
Cow position: chr21:14780263-14780404 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 113, 122

Conread position: 140-281
Cow position: chr21:32432514-32432655 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 142-298
Cow position: chr21:7125665-7125510 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 142, 21

Conread position: 160-304
Cow position: chr21:3763214-3763071 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 42-185
Cow position: chr22:28532653-28532795 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 42-254
Cow position: chr22:4617505-4617287 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 152

Conread position: 42-254
Cow position: chr22:5350761-5350545 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 152

Conread position: 42-304
Cow position: chr22:10467897-10468153 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 192
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 33, 0

Conread position: 45-223
Cow position: chr22:45605089-45604913 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 75-286
Cow position: chr22:43969430-43969637 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 163
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 91, 0

Conread position: 76-286
Cow position: chr22:6555276-6555484 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 170
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 99

Conread position: 84-286
Cow position: chr22:5459553-5459358 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 158
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 44, 84

Conread position: 84-304
Cow position: chr22:6193482-6193266 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 163
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 87, 113

Conread position: 125-286
Cow position: chr22:14796575-14796736 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 128-269
Cow position: chr22:4016938-4016793 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 128-272
Cow position: chr22:10695113-10695252 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 128-274
Cow position: chr22:24773542-24773688 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 128-287
Cow position: chr22:23235077-23235230 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-301
Cow position: chr22:21015047-21015223 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 146, 0

Conread position: 128-304
Cow position: chr22:3242169-3241998 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 49

Conread position: 128-304
Cow position: chr22:11166031-11165859 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 128-304
Cow position: chr22:19568597-19568423 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 35, 0

Conread position: 128-330
Cow position: chr22:956321-956542 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 163
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 123, 0

Conread position: 128-358
Cow position: chr22:27429517-27429283 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 157, 108

Conread position: 132-295
Cow position: chr22:1916030-1916193 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 31, 45

Conread position: 139-330
Cow position: chr22:43025991-43026188 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 135
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 140-276
Cow position: chr22:26429734-26429598 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 142-280
Cow position: chr22:11169458-11169320 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 145-330
Cow position: chr22:4013092-4012898 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 152
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 129, 18

Conread position: 152-286
Cow position: chr22:26040084-26039948 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 98, 0

Conread position: 42-192
Cow position: chr23:3552688-3552541 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 42-194
Cow position: chr23:4506441-4506592 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 26, 34

Conread position: 42-224
Cow position: chr23:2284517-2284697 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 142
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 72, 33

Conread position: 42-282
Cow position: chr23:36379438-36379673 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 27

Conread position: 42-298
Cow position: chr23:4456394-4456137 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 170, 33

Conread position: 42-330
Cow position: chr23:10705575-10705285 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 33

Conread position: 45-209
Cow position: chr23:39492062-39491900 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 77, 29

Conread position: 45-286
Cow position: chr23:4352992-4353232 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 30

Conread position: 51-201
Cow position: chr23:6591086-6591231 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 116, 24

Conread position: 84-294
Cow position: chr23:20076395-20076604 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 165
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 87, 50

Conread position: 84-304
Cow position: chr23:2501565-2501353 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 90, 0

Conread position: 85-317
Cow position: chr23:5914551-5914323 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 181, 67

Conread position: 115-304
Cow position: chr23:30239707-30239522 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 40

Conread position: 116-316
Cow position: chr23:5249975-5249780 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 37

Conread position: 126-272
Cow position: chr23:6234127-6233981 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 128-275
Cow position: chr23:14321692-14321550 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-281
Cow position: chr23:30243254-30243106 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 128-287
Cow position: chr23:36094436-36094594 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 153, 0

Conread position: 128-301
Cow position: chr23:8193410-8193582 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 128-333
Cow position: chr23:18589573-18589779 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 148, 37

Conread position: 128-344
Cow position: chr23:35714868-35715090 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 71, 137

Conread position: 129-282
Cow position: chr23:6721133-6721293 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 47, 0

Conread position: 140-274
Cow position: chr23:15605603-15605737 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 140-330
Cow position: chr23:4530537-4530344 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 147, 0

Conread position: 179-315
Cow position: chr23:5246950-5246815 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 106, 0

Conread position: 41-188
Cow position: chr24:28829669-28829523 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 34, 0

Conread position: 41-286
Cow position: chr24:29502816-29502574 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 182
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 72, 34

Conread position: 42-224
Cow position: chr24:36745964-36746136 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 141
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 33, 0

Conread position: 52-286
Cow position: chr24:14537593-14537361 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 180
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 141, 23

Conread position: 62-282
Cow position: chr24:39036638-39036854 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 0

Conread position: 65-294
Cow position: chr24:28764314-28764536 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 154
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 84-286
Cow position: chr24:29153690-29153887 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 29, 69

Conread position: 86-301
Cow position: chr24:3002594-3002807 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 164
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 202, 59

Conread position: 91-318
Cow position: chr24:20776479-20776241 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 215

Conread position: 93-274
Cow position: chr24:36899220-36899396 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 94

Conread position: 106-276
Cow position: chr24:3639789-3639956 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 21, 53

Conread position: 122-347
Cow position: chr24:24159216-24159451 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 177
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 162, 0

Conread position: 128-275
Cow position: chr24:8611235-8611088 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 128-285
Cow position: chr24:6544701-6544544 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 119
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 128-298
Cow position: chr24:39176280-39176114 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 128-304
Cow position: chr24:5561288-5561462 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 123
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 35, 0

Conread position: 128-323
Cow position: chr24:5519788-5519981 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 140
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 12, 136

Conread position: 128-332
Cow position: chr24:42657995-42657787 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 156, 0

Conread position: 128-357
Cow position: chr24:2114456-2114688 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 157, 30

Conread position: 132-281
Cow position: chr24:33906118-33905970 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 0

Conread position: 132-330
Cow position: chr24:16893461-16893260 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 146, 0

Conread position: 135-305
Cow position: chr24:26698117-26697948 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 150, 0

Conread position: 139-281
Cow position: chr24:40465537-40465396 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 142-282
Cow position: chr24:28334906-28335043 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 145-272
Cow position: chr24:28541492-28541620 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 149-315
Cow position: chr24:28989753-28989918 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 144

Conread position: 155-331
Cow position: chr24:39795475-39795292 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 134
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 167-297
Cow position: chr24:42968310-42968439 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 108, 0

Conread position: 38-257
Cow position: chr25:24444582-24444801 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 164
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 188, 37

Conread position: 41-254
Cow position: chr25:11408911-11409128 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 120, 39

Conread position: 42-187
Cow position: chr25:15456364-15456218 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 119, 36

Conread position: 42-197
Cow position: chr25:6130789-6130938 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 42-199
Cow position: chr25:15656385-15656540 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 42-224
Cow position: chr25:22157565-22157740 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 34

Conread position: 42-272
Cow position: chr25:9836028-9836257 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 144

Conread position: 42-277
Cow position: chr25:11433894-11433663 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr25:10473837-10474075 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 189
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 87, 33

Conread position: 42-286
Cow position: chr25:12254715-12254472 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 197, 33

Conread position: 42-286
Cow position: chr25:12409188-12408945 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 199, 33

Conread position: 42-301
Cow position: chr25:16117039-16117304 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 75, 33

Conread position: 42-336
Cow position: chr25:36818574-36818282 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 33

Conread position: 43-286
Cow position: chr25:12142620-12142381 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 45-188
Cow position: chr25:9295-9153 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 45-276
Cow position: chr25:31060502-31060736 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 33, 150

Conread position: 45-286
Cow position: chr25:7493608-7493373 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 30

Conread position: 51-286
Cow position: chr25:7053028-7052795 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 101-329
Cow position: chr25:40632203-40631973 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 42, 11

Conread position: 109-300
Cow position: chr25:36780070-36780254 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 106, 0

Conread position: 128-285
Cow position: chr25:9523895-9523742 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 128-296
Cow position: chr25:6757783-6757943 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr25:5309557-5309383 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 128-330
Cow position: chr25:16086878-16086670 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 149
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 172, 116

Conread position: 128-330
Cow position: chr25:31069910-31069697 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 154
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 123, 39

Conread position: 128-333
Cow position: chr25:17003012-17003226 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 41, 172

Conread position: 129-239
Cow position: chr25:18563137-18563027 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 129-257
Cow position: chr25:7823938-7823814 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 33, 0

Conread position: 129-323
Cow position: chr25:7700505-7700314 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 154, 23

Conread position: 132-247
Cow position: chr25:33013433-33013319 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 94
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 31, 0

Conread position: 132-276
Cow position: chr25:6983580-6983436 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 140-328
Cow position: chr25:7768257-7768061 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 141
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 124, 12

Conread position: 140-330
Cow position: chr25:7797207-7797400 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 140
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 144, 27

Conread position: 142-332
Cow position: chr25:9844219-9844422 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 131, 0

Conread position: 160-338
Cow position: chr25:4678064-4677886 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 13

Conread position: 163-299
Cow position: chr25:20252589-20252729 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 34

Conread position: 42-286
Cow position: chr26:5993201-5993434 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-330
Cow position: chr26:4474548-4474814 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 45-165
Cow position: chr26:20868421-20868303 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 99
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 0

Conread position: 45-249
Cow position: chr26:33702664-33702871 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 160
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 152, 30

Conread position: 45-286
Cow position: chr26:7955186-7954952 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 30

Conread position: 53-315
Cow position: chr26:1504376-1504119 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 189
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 10, 17

Conread position: 125-304
Cow position: chr26:28149072-28148893 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 158, 27

Conread position: 128-304
Cow position: chr26:15135383-15135208 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 46, 158

Conread position: 128-304
Cow position: chr26:31852329-31852502 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 24, 0

Conread position: 128-321
Cow position: chr26:32124688-32124491 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 149, 24

Conread position: 128-330
Cow position: chr26:7208575-7208794 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 146, 0

Conread position: 128-330
Cow position: chr26:30431307-30431103 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 144
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 145, 121

Conread position: 41-197
Cow position: chr27:15106368-15106215 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 137, 34

Conread position: 42-188
Cow position: chr27:24717640-24717779 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 42-191
Cow position: chr27:11478228-11478375 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 33, 0

Conread position: 42-201
Cow position: chr27:26124489-26124646 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 42-282
Cow position: chr27:24722599-24722351 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 187
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 73, 34

Conread position: 42-286
Cow position: chr27:1791082-1791320 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr27:11596087-11596314 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 180
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr27:15218341-15218097 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 32

Conread position: 42-286
Cow position: chr27:22277403-22277160 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 175
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 210, 33

Conread position: 42-286
Cow position: chr27:22441664-22441907 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 33

Conread position: 42-330
Cow position: chr27:15408644-15408352 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 207
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 99, 33

Conread position: 42-330
Cow position: chr27:24715939-24715656 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 45-286
Cow position: chr27:31211840-31211607 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 173
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 30, 0

Conread position: 45-297
Cow position: chr27:22630014-22629765 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 45-300
Cow position: chr27:13705217-13704964 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 30

Conread position: 45-304
Cow position: chr27:12472322-12472594 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 185
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 27, 150

Conread position: 105-315
Cow position: chr27:1644626-1644413 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 161
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 170, 190

Conread position: 128-281
Cow position: chr27:5169303-5169150 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 128-281
Cow position: chr27:6029821-6029673 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 128-281
Cow position: chr27:18497825-18497978 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 128-288
Cow position: chr27:9519388-9519228 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 128-300
Cow position: chr27:6915752-6915922 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 128-304
Cow position: chr27:30357130-30356962 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 126
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 128-315
Cow position: chr27:28150751-28150938 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 131, 135

Conread position: 128-315
Cow position: chr27:31551194-31551375 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 134
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 48, 24

Conread position: 132-251
Cow position: chr27:24752690-24752572 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 27, 0

Conread position: 132-333
Cow position: chr27:30467216-30467006 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 148
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 52, 0

Conread position: 140-281
Cow position: chr27:20831936-20832076 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 30, 12

Conread position: 140-282
Cow position: chr27:29837044-29836904 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 8e-29
Alignm gaps (pig, cow): 109, 0

Conread position: 142-281
Cow position: chr27:15471611-15471750 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 145-315
Cow position: chr27:22335134-22334965 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 158, 148

Conread position: 175-286
Cow position: chr27:205102-205213 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 96
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 41-261
Cow position: chr28:11095815-11095603 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 172
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 42-194
Cow position: chr28:18714178-18714324 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 42-282
Cow position: chr28:4564026-4564242 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 172
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 42-327
Cow position: chr28:34697277-34697558 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 213
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 236, 33

Conread position: 85-318
Cow position: chr28:11209552-11209787 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 179
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 41, 106

Conread position: 102-336
Cow position: chr28:5709441-5709675 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 181
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 182, 14

Conread position: 128-257
Cow position: chr28:462780-462652 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 108, 0

Conread position: 128-276
Cow position: chr28:28417854-28417708 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 128-281
Cow position: chr28:28556182-28556335 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 128-296
Cow position: chr28:33322073-33321909 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 156, 30

Conread position: 128-297
Cow position: chr28:28602372-28602209 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 128-304
Cow position: chr28:12078595-12078424 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 24

Conread position: 128-304
Cow position: chr28:30613192-30613021 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 48, 24

Conread position: 128-306
Cow position: chr28:11772351-11772529 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 153, 166

Conread position: 128-330
Cow position: chr28:26290792-26290580 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 70, 24

Conread position: 131-287
Cow position: chr28:30418344-30418490 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 132-330
Cow position: chr28:26861083-26861285 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 135, 20

Conread position: 146-290
Cow position: chr28:13646419-13646276 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 133, 0

Conread position: 146-304
Cow position: chr28:30048158-30048318 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 90, 0

Conread position: 26-286
Cow position: chr29:9409583-9409327 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 195
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 23, 7

Conread position: 41-209
Cow position: chr29:3335835-3336001 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 34, 0

Conread position: 41-339
Cow position: chr29:41021907-41021606 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 34

Conread position: 42-192
Cow position: chr29:1627405-1627553 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 42-202
Cow position: chr29:29783489-29783648 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 154, 33

Conread position: 42-224
Cow position: chr29:10118494-10118675 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 142
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 33, 0

Conread position: 42-224
Cow position: chr29:37986930-37987118 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 154, 33

Conread position: 42-286
Cow position: chr29:4885410-4885652 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 128, 33

Conread position: 42-315
Cow position: chr29:41345486-41345755 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 256, 33

Conread position: 43-272
Cow position: chr29:16754831-16754594 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 160
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 182

Conread position: 55-329
Cow position: chr29:27020534-27020800 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 20

Conread position: 71-286
Cow position: chr29:824293-824503 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 85-286
Cow position: chr29:42550466-42550266 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 158
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 109, 0

Conread position: 88-315
Cow position: chr29:14145849-14146070 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 159
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 62, 0

Conread position: 128-277
Cow position: chr29:25454035-25454181 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 48, 24

Conread position: 128-281
Cow position: chr29:6323067-6323215 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 128-298
Cow position: chr29:1762808-1762638 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 161, 66

Conread position: 128-315
Cow position: chr29:27114496-27114313 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 155, 36

Conread position: 128-317
Cow position: chr29:37209635-37209447 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 155, 24

Conread position: 128-330
Cow position: chr29:34285617-34285412 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 144, 0

Conread position: 132-280
Cow position: chr29:15525371-15525519 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 132-281
Cow position: chr29:19823434-19823289 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 140-281
Cow position: chr29:16946175-16946035 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 12, 0

Conread position: 142-330
Cow position: chr29:32201983-32201791 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 108, 157

Conread position: 176-336
Cow position: chr29:1954275-1954439 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 8-227
Cow position: chr3:74797065-74797288 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 49, 22

Conread position: 41-282
Cow position: chr3:63496206-63495958 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 34

Conread position: 42-197
Cow position: chr3:58594837-58594684 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 33, 0

Conread position: 42-276
Cow position: chr3:29842714-29842478 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 9

Conread position: 42-304
Cow position: chr3:9188231-9187987 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 193
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 246, 31

Conread position: 42-305
Cow position: chr3:60492392-60492130 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 217, 35

Conread position: 42-323
Cow position: chr3:51414985-51414705 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 204
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 80, 21

Conread position: 42-359
Cow position: chr3:59579338-59579030 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 33

Conread position: 45-155
Cow position: chr3:71470841-71470732 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 45-282
Cow position: chr3:36747995-36747760 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 177
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 30, 0

Conread position: 45-315
Cow position: chr3:54563788-54563521 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 192
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 93, 17

Conread position: 45-328
Cow position: chr3:62740222-62739943 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 30

Conread position: 45-330
Cow position: chr3:81991653-81991945 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 205
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 163, 30

Conread position: 47-201
Cow position: chr3:3643305-3643460 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 92, 28

Conread position: 51-286
Cow position: chr3:7146426-7146658 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 0

Conread position: 65-299
Cow position: chr3:21278002-21278234 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 176
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 210, 10

Conread position: 65-299
Cow position: chr3:74406829-74406594 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 172
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 205, 87

Conread position: 75-222
Cow position: chr3:28716980-28716834 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 114, 0

Conread position: 84-234
Cow position: chr3:548376-548227 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 72, 40

Conread position: 84-253
Cow position: chr3:81527311-81527478 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 105, 0

Conread position: 84-256
Cow position: chr3:41407876-41408049 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 74, 89

Conread position: 84-305
Cow position: chr3:7813206-7813434 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 60, 68

Conread position: 94-330
Cow position: chr3:60535808-60535571 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 174
Alignm E-value: 8e-40
Alignm gaps (pig, cow): 205, 120

Conread position: 96-304
Cow position: chr3:28629846-28630052 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 162
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 192, 93

Conread position: 117-327
Cow position: chr3:77691820-77692044 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 7, 36

Conread position: 126-304
Cow position: chr3:23654521-23654348 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 157, 32

Conread position: 128-266
Cow position: chr3:38705685-38705550 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-271
Cow position: chr3:2119511-2119368 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 128-276
Cow position: chr3:5640982-5640839 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 128-276
Cow position: chr3:44569841-44569693 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 128-280
Cow position: chr3:2085790-2085645 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 0

Conread position: 128-281
Cow position: chr3:30245942-30245789 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 128-295
Cow position: chr3:81368135-81368299 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 130
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 19, 36

Conread position: 128-297
Cow position: chr3:81576930-81576761 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 154

Conread position: 128-301
Cow position: chr3:24503366-24503535 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 132
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 155, 22

Conread position: 128-304
Cow position: chr3:13636421-13636597 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 124
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 156, 165

Conread position: 128-323
Cow position: chr3:6950088-6950280 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 151
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 155, 30

Conread position: 128-327
Cow position: chr3:24156329-24156531 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 140
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 157, 108

Conread position: 128-329
Cow position: chr3:67824170-67824379 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 147, 24

Conread position: 140-304
Cow position: chr3:48566129-48565964 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 139, 155

Conread position: 140-315
Cow position: chr3:23034879-23035052 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 143, 12

Conread position: 142-330
Cow position: chr3:48337785-48337581 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 149
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 57, 48

Conread position: 42-197
Cow position: chr4:45986503-45986656 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 42-272
Cow position: chr4:53659170-53658941 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 150, 33

Conread position: 42-286
Cow position: chr4:121679-121927 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 33

Conread position: 42-286
Cow position: chr4:32008684-32008446 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 186
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 87, 33

Conread position: 42-286
Cow position: chr4:43404342-43404580 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 33

Conread position: 42-286
Cow position: chr4:44847193-44847431 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 42-327
Cow position: chr4:42962053-42961773 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 198
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 23, 150

Conread position: 42-334
Cow position: chr4:21005829-21005523 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 225
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 236, 30

Conread position: 45-188
Cow position: chr4:40252323-40252465 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 47-299
Cow position: chr4:10861146-10861401 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 27

Conread position: 52-298
Cow position: chr4:23690448-23690683 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 188
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 61, 23

Conread position: 91-282
Cow position: chr4:68407234-68407043 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 153
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 0, 0

Conread position: 96-301
Cow position: chr4:62625434-62625231 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 154
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 201, 82

Conread position: 106-310
Cow position: chr4:57571802-57572002 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 47

Conread position: 123-330
Cow position: chr4:63218250-63218452 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 143
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 190, 9

Conread position: 128-281
Cow position: chr4:50629737-50629589 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 128-283
Cow position: chr4:57262873-57262719 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 128-286
Cow position: chr4:62609854-62609695 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 137, 55

Conread position: 128-294
Cow position: chr4:13516048-13515882 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 129
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 69, 62

Conread position: 128-294
Cow position: chr4:45462438-45462271 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 156, 0

Conread position: 128-297
Cow position: chr4:41852845-41853012 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 35, 0

Conread position: 128-304
Cow position: chr4:55844520-55844697 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 131
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 125, 76

Conread position: 132-276
Cow position: chr4:67174708-67174848 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 93, 0

Conread position: 132-304
Cow position: chr4:68071825-68071990 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 152, 31

Conread position: 140-281
Cow position: chr4:64698073-64697937 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 140-330
Cow position: chr4:37488975-37489174 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 153
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 138, 12

Conread position: 142-301
Cow position: chr4:46787884-46787729 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 142-301
Cow position: chr4:66930197-66930358 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 127
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 137, 0

Conread position: 160-282
Cow position: chr4:10489876-10489754 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 166-286
Cow position: chr4:11012114-11012234 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 102
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 42-272
Cow position: chr5:64370902-64370668 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 178
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 38, 33

Conread position: 42-285
Cow position: chr5:56623641-56623871 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 2.94273e-44
Alignm gaps (pig, cow): 16, 34

Conread position: 42-286
Cow position: chr5:69526780-69527025 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 33

Conread position: 42-304
Cow position: chr5:20188907-20188649 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 245, 33

Conread position: 42-304
Cow position: chr5:64183541-64183283 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 33

Conread position: 42-330
Cow position: chr5:48478730-48478444 (view UCSC Genome Browser custom track)
Alignm length: 292
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 33

Conread position: 42-331
Cow position: chr5:42714313-42714033 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 45-231
Cow position: chr5:43463485-43463670 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 141
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 30, 0

Conread position: 45-254
Cow position: chr5:22172461-22172675 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 47

Conread position: 48-209
Cow position: chr5:40699450-40699291 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 60-304
Cow position: chr5:36670126-36669889 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 180
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 152, 9

Conread position: 83-282
Cow position: chr5:18380886-18380690 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 43, 71

Conread position: 84-321
Cow position: chr5:17848441-17848675 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 13, 107

Conread position: 109-257
Cow position: chr5:72590585-72590440 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 110-301
Cow position: chr5:66307973-66307785 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 152
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 174, 88

Conread position: 128-262
Cow position: chr5:44912176-44912042 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 128-276
Cow position: chr5:10883148-10883004 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 128-280
Cow position: chr5:59786752-59786601 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 127, 0

Conread position: 128-281
Cow position: chr5:33983375-33983228 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 128-281
Cow position: chr5:50994908-50994755 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 128
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 69, 62

Conread position: 128-281
Cow position: chr5:60124966-60125114 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 0

Conread position: 128-282
Cow position: chr5:43156462-43156616 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 121
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 128-287
Cow position: chr5:25483478-25483631 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 128-297
Cow position: chr5:20656979-20657143 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 30, 0

Conread position: 128-298
Cow position: chr5:69122207-69122038 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 144, 71

Conread position: 128-301
Cow position: chr5:22185664-22185496 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 159, 22

Conread position: 128-302
Cow position: chr5:64068277-64068454 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 140, 168

Conread position: 128-304
Cow position: chr5:19683480-19683304 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 128-304
Cow position: chr5:48250500-48250669 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 128-304
Cow position: chr5:55295585-55295760 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 42, 24

Conread position: 128-315
Cow position: chr5:47724510-47724327 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 155, 30

Conread position: 128-316
Cow position: chr5:33910772-33910957 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 67, 30

Conread position: 128-330
Cow position: chr5:44490724-44490929 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 151
Alignm E-value: 9e-32
Alignm gaps (pig, cow): 67, 175

Conread position: 132-281
Cow position: chr5:48047359-48047215 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 135-276
Cow position: chr5:36405830-36405689 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 139-297
Cow position: chr5:47761645-47761488 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 142, 0

Conread position: 140-275
Cow position: chr5:21460271-21460401 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 140-297
Cow position: chr5:45143528-45143682 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 143, 12

Conread position: 140-310
Cow position: chr5:60916722-60916552 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 13, 124

Conread position: 140-323
Cow position: chr5:47491112-47490934 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 134
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 166, 15

Conread position: 140-330
Cow position: chr5:58447906-58448106 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 145
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 34, 14

Conread position: 142-304
Cow position: chr5:8771034-8771196 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 126
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 105, 132

Conread position: 145-301
Cow position: chr5:55170611-55170761 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 138, 19

Conread position: 158-286
Cow position: chr5:13198729-13198857 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 159-332
Cow position: chr5:46821488-46821664 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 94, 77

Conread position: 163-298
Cow position: chr5:48507071-48507205 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 175-273
Cow position: chr5:34469758-34469660 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 81
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-197
Cow position: chr6:49166618-49166797 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 18, 13

Conread position: 42-209
Cow position: chr6:60174481-60174648 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 96, 33

Conread position: 42-248
Cow position: chr6:48376525-48376321 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 80, 14

Conread position: 42-261
Cow position: chr6:19709514-19709729 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 167
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 14, 21

Conread position: 42-347
Cow position: chr6:434851-435154 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 270, 33

Conread position: 43-286
Cow position: chr6:34023602-34023356 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 181
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 18, 154

Conread position: 45-330
Cow position: chr6:59988587-59988300 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 31

Conread position: 45-332
Cow position: chr6:25810317-25810035 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 33

Conread position: 59-317
Cow position: chr6:48024259-48024001 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 236

Conread position: 75-272
Cow position: chr6:24304083-24304275 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 152
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 24, 0

Conread position: 77-281
Cow position: chr6:6380098-6379894 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 159
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 22, 114

Conread position: 83-272
Cow position: chr6:57965091-57965271 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 144
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 83-297
Cow position: chr6:54431194-54431398 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 62, 0

Conread position: 84-265
Cow position: chr6:42988851-42989029 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 78, 5

Conread position: 86-298
Cow position: chr6:1629729-1629945 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 151
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 164, 67

Conread position: 93-298
Cow position: chr6:39706323-39706526 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 114-301
Cow position: chr6:19711007-19710824 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 13, 39

Conread position: 116-329
Cow position: chr6:39743941-39743731 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 161
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 11, 37

Conread position: 126-281
Cow position: chr6:30021525-30021377 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 128-234
Cow position: chr6:29690183-29690289 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 128-281
Cow position: chr6:54084489-54084341 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 24, 0

Conread position: 128-281
Cow position: chr6:61431633-61431786 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 119
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 128-304
Cow position: chr6:54879736-54879560 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 156, 166

Conread position: 128-328
Cow position: chr6:26125087-26125303 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 112, 22

Conread position: 128-330
Cow position: chr6:53148142-53148351 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 139, 116

Conread position: 135-327
Cow position: chr6:61211835-61211640 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 153, 0

Conread position: 140-304
Cow position: chr6:25627743-25627582 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 126

Conread position: 140-304
Cow position: chr6:56674589-56674425 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 144, 153

Conread position: 140-315
Cow position: chr6:27636233-27636058 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 71, 12

Conread position: 141-304
Cow position: chr6:6812356-6812520 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 130
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 7, 51

Conread position: 141-336
Cow position: chr6:27578483-27578688 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 147
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 46, 157

Conread position: 144-281
Cow position: chr6:55461890-55461752 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 128, 0

Conread position: 146-281
Cow position: chr6:47169855-47169720 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 175-281
Cow position: chr6:32521482-32521588 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 90
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 42-194
Cow position: chr7:5026532-5026379 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 97, 33

Conread position: 42-194
Cow position: chr7:43899787-43899637 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 123
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 34, 0

Conread position: 42-201
Cow position: chr7:47884615-47884462 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 42-254
Cow position: chr7:28005154-28005360 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 160
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 33, 0

Conread position: 42-272
Cow position: chr7:23456154-23456384 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 33

Conread position: 42-282
Cow position: chr7:25851800-25852038 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 0

Conread position: 42-282
Cow position: chr7:32826460-32826697 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 42-286
Cow position: chr7:2270206-2270445 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 42-286
Cow position: chr7:16491683-16491932 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 137, 33

Conread position: 42-299
Cow position: chr7:6320780-6320528 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 46, 33

Conread position: 42-304
Cow position: chr7:14869243-14869500 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 236, 31

Conread position: 42-304
Cow position: chr7:28894979-28894726 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 190
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 189, 33

Conread position: 42-306
Cow position: chr7:49211774-49211514 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 0

Conread position: 45-261
Cow position: chr7:17219946-17220161 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 0

Conread position: 45-286
Cow position: chr7:55697112-55697339 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 185
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 218, 28

Conread position: 47-286
Cow position: chr7:1822760-1822523 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 0

Conread position: 53-286
Cow position: chr7:38094727-38094947 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 10, 0

Conread position: 59-298
Cow position: chr7:57006183-57005959 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 178
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 229, 16

Conread position: 60-327
Cow position: chr7:8734862-8734595 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 188
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 88, 15

Conread position: 62-228
Cow position: chr7:11431172-11431337 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 136
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 13, 0

Conread position: 77-252
Cow position: chr7:16701895-16702069 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 134
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 47, 0

Conread position: 125-304
Cow position: chr7:14420991-14420814 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 137
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 156, 65

Conread position: 128-272
Cow position: chr7:76182-76322 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 72, 0

Conread position: 128-282
Cow position: chr7:4544236-4544082 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 111
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 128-287
Cow position: chr7:5217087-5217242 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 128-287
Cow position: chr7:8983258-8983100 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 128-295
Cow position: chr7:61777035-61776866 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 131
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 153, 0

Conread position: 128-304
Cow position: chr7:907749-907574 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 27

Conread position: 128-304
Cow position: chr7:33933254-33933080 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 160, 23

Conread position: 128-306
Cow position: chr7:7245469-7245641 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 173, 22

Conread position: 128-318
Cow position: chr7:21926661-21926473 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 142
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 150, 24

Conread position: 128-329
Cow position: chr7:11953191-11952985 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 125, 24

Conread position: 128-330
Cow position: chr7:14214610-14214816 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 148, 39

Conread position: 128-333
Cow position: chr7:37206906-37207121 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 162
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 146, 90

Conread position: 128-342
Cow position: chr7:37189587-37189792 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 69, 109

Conread position: 129-304
Cow position: chr7:8041168-8040993 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 155, 164

Conread position: 132-282
Cow position: chr7:13808790-13808940 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 141-286
Cow position: chr7:10035317-10035178 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 142-304
Cow position: chr7:40457907-40457745 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 120
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 180-286
Cow position: chr7:39174227-39174124 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 42-188
Cow position: chr8:54009453-54009597 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 42-224
Cow position: chr8:9804581-9804400 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 143
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 33, 0

Conread position: 42-286
Cow position: chr8:9826787-9826547 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 184
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 119, 35

Conread position: 42-295
Cow position: chr8:48761112-48761365 (view UCSC Genome Browser custom track)
Alignm length: 256
Alignm identity: 186
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 230, 33

Conread position: 42-318
Cow position: chr8:18714997-18714725 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 7.00649e-43
Alignm gaps (pig, cow): 161, 33

Conread position: 44-282
Cow position: chr8:51993811-51993576 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 178
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 15, 0

Conread position: 46-214
Cow position: chr8:25582466-25582303 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 121
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 46-330
Cow position: chr8:1282108-1281831 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 29

Conread position: 62-286
Cow position: chr8:52013165-52012943 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 173
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 0

Conread position: 128-248
Cow position: chr8:51971973-51971853 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 98
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 128-256
Cow position: chr8:50395014-50394885 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 125, 0

Conread position: 128-282
Cow position: chr8:43021077-43021227 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 128-298
Cow position: chr8:36517094-36517264 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 128-304
Cow position: chr8:51576130-51575955 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 155, 24

Conread position: 128-315
Cow position: chr8:52000803-52000621 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 156, 24

Conread position: 128-323
Cow position: chr8:37472610-37472413 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 144
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 155, 34

Conread position: 128-330
Cow position: chr8:35427445-35427652 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 149
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 22, 122

Conread position: 128-330
Cow position: chr8:61548070-61548272 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 119, 30

Conread position: 132-275
Cow position: chr8:37532846-37532989 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 135-304
Cow position: chr8:6864998-6865166 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 27

Conread position: 140-300
Cow position: chr8:51237372-51237534 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 149, 134

Conread position: 140-301
Cow position: chr8:19965162-19965005 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 124
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 33, 0

Conread position: 175-287
Cow position: chr8:8706993-8706882 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 42-191
Cow position: chr9:36425915-36426063 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113<