Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-rpliv0125_p15.5
        

               Conread position:
               1-447
               

               Cow position:
               chr10:8996506-8996059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-460
               

               Cow position:
               chr10:8996842-8996381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               294
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               180, 176
               

               Conread position:
               1-492
               

               Cow position:
               chr10:8996590-8996097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               500
               

               Alignm identity:
               313
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               3-288
               

               Cow position:
               chr10:8996336-8996051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               287
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               59-451
               

               Cow position:
               chr10:9010596-9010202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               158, 149
               

               Conread position:
               88-445
               

               Cow position:
               chr10:9031254-9031613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               48, 36
               

               Conread position:
               134-451
               

               Cow position:
               chr10:8996877-8996558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               27, 21
               

               Conread position:
               1-336
               

               Cow position:
               chr11:74554513-74554175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 49
               

               Conread position:
               1-447
               

               Cow position:
               chr11:74554933-74554485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               285
               

               Alignm E-value:
               7e-37
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               3-451
               

               Cow position:
               chr11:74554679-74554229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               299, 342
               

               Conread position:
               11-451
               

               Cow position:
               chr11:74555091-74554649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               52, 24
               

               Conread position:
               1-466
               

               Cow position:
               chr13:39984407-39984872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               473
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-492
               

               Cow position:
               chr13:39983987-39984480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               295
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               1-492
               

               Cow position:
               chr13:39984071-39984564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               497
               

               Alignm identity:
               300
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               51, 60
               

               Conread position:
               3-326
               

               Cow position:
               chr13:39984577-39984903 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               206
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               65-451
               

               Cow position:
               chr13:39984387-39984775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               145, 159
               

               Conread position:
               135-447
               

               Cow position:
               chr13:56292145-56291831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               201
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               80, 93
               

               Conread position:
               142-451
               

               Cow position:
               chr13:56333692-56334003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               59, 86
               

               Conread position:
               1-373
               

               Cow position:
               chr14:25784358-25784733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               36, 56
               

               Conread position:
               1-413
               

               Cow position:
               chr14:25860366-25860781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               29, 54
               

               Conread position:
               1-427
               

               Cow position:
               chr14:25859694-25860123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               258
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               61, 34
               

               Conread position:
               1-428
               

               Cow position:
               chr14:25836053-25836483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               1-428
               

               Cow position:
               chr14:25859358-25859788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               260
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               1-442
               

               Cow position:
               chr14:25876745-25877188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               273
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 34
               

               Conread position:
               1-444
               

               Cow position:
               chr14:25794588-25794144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               1-446
               

               Cow position:
               chr14:25784106-25784553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               285
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               294, 429
               

               Conread position:
               1-446
               

               Cow position:
               chr14:25859526-25859973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-446
               

               Cow position:
               chr14:25859778-25860225 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               1-447
               

               Cow position:
               chr14:25783938-25784385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               294, 429
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25783350-25783802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25783518-25783970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25783770-25784222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               287
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25784274-25784726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               41, 67
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25794756-25794303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               295
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25795008-25794556 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               282
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               58, 47
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25836305-25836757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               279
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               30, 52
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25836557-25837009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               36, 54
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25860114-25860566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               285
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr14:25877165-25877617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-491
               

               Cow position:
               chr14:25795176-25794684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               498
               

               Alignm identity:
               305
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               87, 54
               

               Conread position:
               2-442
               

               Cow position:
               chr14:25859191-25859633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               279
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               2-447
               

               Cow position:
               chr14:25795343-25794897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               290
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               71, 33
               

               Conread position:
               3-368
               

               Cow position:
               chr14:3101076-3100713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               369
               

               Alignm identity:
               225
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               287, 16
               

               Conread position:
               3-447
               

               Cow position:
               chr14:25836727-25837173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               31, 46
               

               Conread position:
               12-429
               

               Cow position:
               chr14:25877428-25877848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               256
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               18, 43
               

               Conread position:
               12-456
               

               Cow position:
               chr14:25876504-25876950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               25, 48
               

               Conread position:
               52-447
               

               Cow position:
               chr14:25876460-25876857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               106, 101
               

               Conread position:
               134-428
               

               Cow position:
               chr14:25835934-25836231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 19
               

               Conread position:
               151-446
               

               Cow position:
               chr14:3127782-3127485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 74
               

               Conread position:
               1-380
               

               Cow position:
               chr16:14627159-14626777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               247
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               1-445
               

               Cow position:
               chr16:14627411-14626965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr16:14627747-14627300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               12-451
               

               Cow position:
               chr16:14627820-14627379 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               286
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               26, 54
               

               Conread position:
               12-459
               

               Cow position:
               chr16:14627484-14627037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 34
               

               Conread position:
               86-428
               

               Cow position:
               chr16:14627914-14627569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               221
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               113, 142
               

               Conread position:
               1-365
               

               Cow position:
               chr17:22499305-22498939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-371
               

               Cow position:
               chr17:22452207-22451834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               1-394
               

               Cow position:
               chr17:22589592-22589196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               255
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-428
               

               Cow position:
               chr17:22498969-22498539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               1-444
               

               Cow position:
               chr17:22473508-22473954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               1-447
               

               Cow position:
               chr17:22552678-22552230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               44, 72
               

               Conread position:
               1-451
               

               Cow position:
               chr17:22452375-22451923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               287
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr17:22499053-22498601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               41, 59
               

               Conread position:
               1-451
               

               Cow position:
               chr17:22552258-22551806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               59, 34
               

               Conread position:
               1-451
               

               Cow position:
               chr17:22552427-22551974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               7, 54
               

               Conread position:
               1-456
               

               Cow position:
               chr17:22552174-22551717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               1-457
               

               Cow position:
               chr17:22589928-22589470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               2-447
               

               Cow position:
               chr17:22499388-22498942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               2-447
               

               Cow position:
               chr17:22590179-22589732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               7-446
               

               Cow position:
               chr17:22473262-22473703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               43-451
               

               Cow position:
               chr17:22590305-22589896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               73, 15
               

               Conread position:
               65-368
               

               Cow position:
               chr17:22551858-22551552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               59, 79
               

               Conread position:
               85-451
               

               Cow position:
               chr17:22499389-22499021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               236
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               218, 345
               

               Conread position:
               1-356
               

               Cow position:
               chr18:50058860-50058502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               1-361
               

               Cow position:
               chr18:53635365-53635003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               49, 34
               

               Conread position:
               1-367
               

               Cow position:
               chr18:33093015-33092646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               223
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               210, 222
               

               Conread position:
               1-367
               

               Cow position:
               chr18:43022392-43022023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-367
               

               Cow position:
               chr18:50251174-50251543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               231
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               1-368
               

               Cow position:
               chr18:50099906-50100276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               1-369
               

               Cow position:
               chr18:56128800-56129171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               1-374
               

               Cow position:
               chr18:50099822-50100197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 65
               

               Conread position:
               1-379
               

               Cow position:
               chr18:42837509-42837128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               1-380
               

               Cow position:
               chr18:42744206-42743824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               41, 58
               

               Conread position:
               1-381
               

               Cow position:
               chr18:43048637-43048255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               250
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-400
               

               Cow position:
               chr18:42959788-42959396 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               216, 33
               

               Conread position:
               1-419
               

               Cow position:
               chr18:41948753-41948332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               1-420
               

               Cow position:
               chr18:14453281-14452859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               272
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               288, 395
               

               Conread position:
               1-420
               

               Cow position:
               chr18:41198338-41198760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-420
               

               Cow position:
               chr18:44184375-44183953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-421
               

               Cow position:
               chr18:42792483-42792906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               60, 38
               

               Conread position:
               1-428
               

               Cow position:
               chr18:43174929-43174499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               287, 387
               

               Conread position:
               1-428
               

               Cow position:
               chr18:51400791-51401221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               50, 57
               

               Conread position:
               1-429
               

               Cow position:
               chr18:14453929-14453498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               262
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               1-433
               

               Cow position:
               chr18:51751908-51751478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               1-433
               

               Cow position:
               chr18:52447955-52448393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               281
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-442
               

               Cow position:
               chr18:43093663-43093220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               294
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               1-442
               

               Cow position:
               chr18:43119980-43119537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               290
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               36, 45
               

               Conread position:
               1-442
               

               Cow position:
               chr18:51368427-51367984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 58
               

               Conread position:
               1-442
               

               Cow position:
               chr18:51765739-51765296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               1-442
               

               Cow position:
               chr18:51765907-51765464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               1-442
               

               Cow position:
               chr18:51789718-51789275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               1-442
               

               Cow position:
               chr18:51839386-51838943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               270
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               1-443
               

               Cow position:
               chr18:43168135-43168578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               278
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-446
               

               Cow position:
               chr18:40324457-40324010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               1-446
               

               Cow position:
               chr18:42674894-42674447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               1-446
               

               Cow position:
               chr18:42960040-42959602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               1-446
               

               Cow position:
               chr18:42984965-42984518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               1-446
               

               Cow position:
               chr18:43175433-43174986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               1-446
               

               Cow position:
               chr18:44184711-44184264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               1-446
               

               Cow position:
               chr18:44240352-44240799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               1-446
               

               Cow position:
               chr18:44398180-44397733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               1-446
               

               Cow position:
               chr18:49033375-49032928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               1-447
               

               Cow position:
               chr18:33064343-33063895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               290
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               121, 137
               

               Conread position:
               1-447
               

               Cow position:
               chr18:33064595-33064148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               43, 31
               

               Conread position:
               1-447
               

               Cow position:
               chr18:40086423-40085981 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 68
               

               Conread position:
               1-447
               

               Cow position:
               chr18:40324793-40324345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               1-447
               

               Cow position:
               chr18:41198002-41198449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr18:42674978-42674531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 34
               

               Conread position:
               1-447
               

               Cow position:
               chr18:42744290-42743843 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               284
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               1-447
               

               Cow position:
               chr18:42791055-42791502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               65, 53
               

               Conread position:
               1-447
               

               Cow position:
               chr18:42960292-42959844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               289
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               1-447
               

               Cow position:
               chr18:43120316-43119868 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               290
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               1-447
               

               Cow position:
               chr18:43175097-43174649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               1-447
               

               Cow position:
               chr18:43175517-43175069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               1-447
               

               Cow position:
               chr18:44153941-44153512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               291
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               117, 37
               

               Conread position:
               1-447
               

               Cow position:
               chr18:44253884-44253437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               50, 59
               

               Conread position:
               1-447
               

               Cow position:
               chr18:44398012-44397564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 66
               

               Conread position:
               1-447
               

               Cow position:
               chr18:44398264-44397816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               288
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               156, 151
               

               Conread position:
               1-447
               

               Cow position:
               chr18:50059112-50058664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr18:50083709-50084157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               277
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr18:50098982-50099430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               44, 56
               

               Conread position:
               1-447
               

               Cow position:
               chr18:50099234-50099681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               272
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               68, 53
               

               Conread position:
               1-447
               

               Cow position:
               chr18:50099486-50099933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               50, 72
               

               Conread position:
               1-447
               

               Cow position:
               chr18:51765403-51764955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               51, 36
               

               Conread position:
               1-447
               

               Cow position:
               chr18:51789466-51789018 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               51, 59
               

               Conread position:
               1-447
               

               Cow position:
               chr18:51789550-51789102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr18:51812709-51812261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr18:52447199-52447647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               286
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               1-447
               

               Cow position:
               chr18:54979651-54980099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               119, 144
               

               Conread position:
               1-447
               

               Cow position:
               chr18:56247554-56247116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               213, 62
               

               Conread position:
               1-449
               

               Cow position:
               chr18:51789130-51788680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               281
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               1-451
               

               Cow position:
               chr18:1418093-1418545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               278
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:33064091-33063639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               276
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               141, 124
               

               Conread position:
               1-451
               

               Cow position:
               chr18:40324541-40324089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               288
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr18:41948837-41948385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               292
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-451
               

               Cow position:
               chr18:41949173-41948721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               46, 53
               

               Conread position:
               1-451
               

               Cow position:
               chr18:42744626-42744174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:42791895-42792347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               1-451
               

               Cow position:
               chr18:42791979-42792431 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               284
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               65, 34
               

               Conread position:
               1-451
               

               Cow position:
               chr18:42959872-42959429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               46, 72
               

               Conread position:
               1-451
               

               Cow position:
               chr18:43022728-43022276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               46, 73
               

               Conread position:
               1-451
               

               Cow position:
               chr18:43093243-43092792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-451
               

               Cow position:
               chr18:43093579-43093127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-451
               

               Cow position:
               chr18:43093987-43093547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-451
               

               Cow position:
               chr18:44154360-44153909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               291
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               48, 38
               

               Conread position:
               1-451
               

               Cow position:
               chr18:44184459-44184007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               292
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-451
               

               Cow position:
               chr18:44184627-44184175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.96831e-44
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:44184879-44184427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 67
               

               Conread position:
               1-451
               

               Cow position:
               chr18:44239848-44240300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               285
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr18:50295363-50295815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               138, 125
               

               Conread position:
               1-451
               

               Cow position:
               chr18:50848846-50849298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:51752076-51751624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               271
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               38, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52427640-52428092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52427808-52428260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52432989-52433441 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52433157-52433609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               46, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52433325-52433777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               50, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52447367-52447819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52447535-52447987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               299
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr18:52447787-52448239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               292
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               44, 68
               

               Conread position:
               1-451
               

               Cow position:
               chr18:55523651-55524103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               41, 27
               

               Conread position:
               1-454
               

               Cow position:
               chr18:40086507-40086055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               1-454
               

               Cow position:
               chr18:40306596-40307051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               56, 34
               

               Conread position:
               1-454
               

               Cow position:
               chr18:42837677-42837223 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               1-454
               

               Cow position:
               chr18:43023064-43022609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               1-454
               

               Cow position:
               chr18:49033123-49032669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               467
               

               Alignm identity:
               287
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               47, 87
               

               Conread position:
               1-454
               

               Cow position:
               chr18:51812373-51811919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               46, 59
               

               Conread position:
               1-454
               

               Cow position:
               chr18:51812877-51812422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               292
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               41, 65
               

               Conread position:
               1-454
               

               Cow position:
               chr18:54979818-54980273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               286
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               1-456
               

               Cow position:
               chr18:33064511-33064054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               1-456
               

               Cow position:
               chr18:41197582-41198039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               1-456
               

               Cow position:
               chr18:41198170-41198627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 42
               

               Conread position:
               1-456
               

               Cow position:
               chr18:44253633-44253189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               5, 66
               

               Conread position:
               1-457
               

               Cow position:
               chr18:40086255-40085807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               36, 55
               

               Conread position:
               1-457
               

               Cow position:
               chr18:55018055-55018513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               69, 41
               

               Conread position:
               1-458
               

               Cow position:
               chr18:40306428-40306887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               292
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               56, 31
               

               Conread position:
               1-458
               

               Cow position:
               chr18:42792315-42792774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               281
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               59, 54
               

               Conread position:
               1-459
               

               Cow position:
               chr18:42985469-42985010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               468
               

               Alignm identity:
               304
               

               Alignm E-value:
               8.00141e-43
               

               Alignm gaps (pig, cow):
               36, 67
               

               Conread position:
               1-461
               

               Cow position:
               chr18:42837761-42837297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               305
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               198, 227
               

               Conread position:
               1-492
               

               Cow position:
               chr18:44154192-44153706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               494
               

               Alignm identity:
               296
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               2-288
               

               Cow position:
               chr18:1418262-1418548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               43, 59
               

               Conread position:
               2-369
               

               Cow position:
               chr18:44397927-44397557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               237
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               2-413
               

               Cow position:
               chr18:40306933-40307347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               48, 59
               

               Conread position:
               2-425
               

               Cow position:
               chr18:50848931-50849357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               59, 52
               

               Conread position:
               2-428
               

               Cow position:
               chr18:52428565-52428994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               2-428
               

               Cow position:
               chr18:52433746-52434175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               2-447
               

               Cow position:
               chr18:51766074-51765627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               64, 52
               

               Conread position:
               2-447
               

               Cow position:
               chr18:52428481-52428928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               2-447
               

               Cow position:
               chr18:52433662-52434109 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               283
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               45, 64
               

               Conread position:
               2-447
               

               Cow position:
               chr18:53509498-53509945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               47, 37
               

               Conread position:
               2-447
               

               Cow position:
               chr18:53525952-53526399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 33
               

               Conread position:
               2-447
               

               Cow position:
               chr18:55523568-55524015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               2-451
               

               Cow position:
               chr18:52427893-52428344 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               57, 40
               

               Conread position:
               2-451
               

               Cow position:
               chr18:52428061-52428512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               298
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               2-451
               

               Cow position:
               chr18:52428313-52428764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               2-451
               

               Cow position:
               chr18:52433242-52433693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               57, 46
               

               Conread position:
               2-451
               

               Cow position:
               chr18:52433494-52433945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               296
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               49, 64
               

               Conread position:
               2-459
               

               Cow position:
               chr18:55018308-55018768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 54
               

               Conread position:
               3-358
               

               Cow position:
               chr18:54993501-54993859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               218
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               48, 28
               

               Conread position:
               3-362
               

               Cow position:
               chr18:50058942-50058580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               48, 64
               

               Conread position:
               3-362
               

               Cow position:
               chr18:56434306-56434668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               219
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               216, 226
               

               Conread position:
               3-367
               

               Cow position:
               chr18:40324287-40323921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               3-367
               

               Cow position:
               chr18:53509583-53509950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               48, 56
               

               Conread position:
               3-369
               

               Cow position:
               chr18:1418179-1418548 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               232
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               46, 58
               

               Conread position:
               3-378
               

               Cow position:
               chr18:33064005-33063627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               44, 63
               

               Conread position:
               3-409
               

               Cow position:
               chr18:52012098-52011689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               266, 270
               

               Conread position:
               3-409
               

               Cow position:
               chr18:55066933-55066524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               49, 56
               

               Conread position:
               3-410
               

               Cow position:
               chr18:53559935-53560345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               251
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               296, 0
               

               Conread position:
               3-410
               

               Cow position:
               chr18:56329254-56328844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               3-413
               

               Cow position:
               chr18:42674808-42674395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               275
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               3-413
               

               Cow position:
               chr18:53525869-53526282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               3-413
               

               Cow position:
               chr18:56494105-56494518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 69
               

               Conread position:
               3-418
               

               Cow position:
               chr18:42827497-42827915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               3-419
               

               Cow position:
               chr18:54980073-54980490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               265
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               39, 56
               

               Conread position:
               3-442
               

               Cow position:
               chr18:41949255-41948814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               271
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               42, 32
               

               Conread position:
               3-442
               

               Cow position:
               chr18:43048719-43048281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               31, 46
               

               Conread position:
               3-442
               

               Cow position:
               chr18:52447873-52448315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               3-442
               

               Cow position:
               chr18:54993417-54993858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               3-444
               

               Cow position:
               chr18:44154106-44153670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               39, 51
               

               Conread position:
               3-445
               

               Cow position:
               chr18:33064929-33064485 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               295
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               67, 52
               

               Conread position:
               3-446
               

               Cow position:
               chr18:44240018-44240463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               34, 53
               

               Conread position:
               3-446
               

               Cow position:
               chr18:53498486-53498932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               276
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               31, 24
               

               Conread position:
               3-446
               

               Cow position:
               chr18:53526037-53526481 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               269
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               119, 133
               

               Conread position:
               3-446
               

               Cow position:
               chr18:56434474-56434919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               270
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               295, 277
               

               Conread position:
               3-447
               

               Cow position:
               chr18:33064173-33063727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               211, 204
               

               Conread position:
               3-447
               

               Cow position:
               chr18:42675144-42674698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               283, 343
               

               Conread position:
               3-447
               

               Cow position:
               chr18:42791141-42791586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               272
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               35, 63
               

               Conread position:
               3-447
               

               Cow position:
               chr18:49032785-49032339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               40, 58
               

               Conread position:
               3-447
               

               Cow position:
               chr18:52012266-52011821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               282
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               3-447
               

               Cow position:
               chr18:53560103-53560549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               45, 27
               

               Conread position:
               3-447
               

               Cow position:
               chr18:54968047-54968493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               263
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               43, 35
               

               Conread position:
               3-447
               

               Cow position:
               chr18:54980241-54980686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               263
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               292, 331
               

               Conread position:
               3-447
               

               Cow position:
               chr18:54992829-54993275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               56, 36
               

               Conread position:
               3-451
               

               Cow position:
               chr18:42791729-42792179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               283
               

               Alignm E-value:
               9e-33
               

               Alignm gaps (pig, cow):
               47, 63
               

               Conread position:
               3-451
               

               Cow position:
               chr18:42985299-42984849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               46, 63
               

               Conread position:
               3-451
               

               Cow position:
               chr18:43022474-43022024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               34, 43
               

               Conread position:
               3-451
               

               Cow position:
               chr18:50246254-50246704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               3-451
               

               Cow position:
               chr18:50848428-50848878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               3-451
               

               Cow position:
               chr18:53560355-53560801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               3-451
               

               Cow position:
               chr18:53635447-53634997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 47
               

               Conread position:
               3-451
               

               Cow position:
               chr18:55008820-55009270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               268
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               45, 36
               

               Conread position:
               3-454
               

               Cow position:
               chr18:53498062-53498517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               284
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               133, 123
               

               Conread position:
               3-456
               

               Cow position:
               chr18:55018393-55018850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               271
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               50, 28
               

               Conread position:
               3-457
               

               Cow position:
               chr18:40306262-40306716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               287
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               3-457
               

               Cow position:
               chr18:53635615-53635158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               268
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               56, 32
               

               Conread position:
               3-460
               

               Cow position:
               chr18:54993249-54993708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               469
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               3-471
               

               Cow position:
               chr18:40306514-40306985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               477
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               38, 54
               

               Conread position:
               4-446
               

               Cow position:
               chr18:43168054-43168498 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               283
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               41, 55
               

               Conread position:
               5-446
               

               Cow position:
               chr18:44240188-44240631 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               42, 56
               

               Conread position:
               5-456
               

               Cow position:
               chr18:42960120-42959676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               6-442
               

               Cow position:
               chr18:51839297-51838859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               6-447
               

               Cow position:
               chr18:51812788-51812345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               6-447
               

               Cow position:
               chr18:52447624-52448067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               6-447
               

               Cow position:
               chr18:53586567-53586124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               271
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               44, 53
               

               Conread position:
               6-447
               

               Cow position:
               chr18:54979572-54980015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               31, 50
               

               Conread position:
               6-447
               

               Cow position:
               chr18:55008571-55009014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               125, 109
               

               Conread position:
               6-447
               

               Cow position:
               chr18:55017892-55018335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               56, 48
               

               Conread position:
               6-457
               

               Cow position:
               chr18:54967716-54968167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               273
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               43, 25
               

               Conread position:
               6-462
               

               Cow position:
               chr18:52427981-52428440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               303
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               41, 60
               

               Conread position:
               7-427
               

               Cow position:
               chr18:51969354-51969775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               272
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               7-451
               

               Cow position:
               chr18:43175670-43175233 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               40, 49
               

               Conread position:
               7-482
               

               Cow position:
               chr18:14454007-14453528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               483
               

               Alignm identity:
               288
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               40, 52
               

               Conread position:
               10-288
               

               Cow position:
               chr18:51839125-51838847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 50
               

               Conread position:
               12-447
               

               Cow position:
               chr18:33093088-33092652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               54, 41
               

               Conread position:
               12-447
               

               Cow position:
               chr18:51752233-51751796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               12-447
               

               Cow position:
               chr18:52447294-52447731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               274
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               47, 25
               

               Conread position:
               12-473
               

               Cow position:
               chr18:42791654-42792121 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               33, 54
               

               Conread position:
               14-447
               

               Cow position:
               chr18:44253951-44253520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               25, 52
               

               Conread position:
               18-425
               

               Cow position:
               chr18:50059599-50059189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               27, 48
               

               Conread position:
               18-447
               

               Cow position:
               chr18:43093727-43093300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               278
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               21, 48
               

               Conread position:
               18-451
               

               Cow position:
               chr18:50246353-50246788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               272
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               30, 17
               

               Conread position:
               20-448
               

               Cow position:
               chr18:51969617-51970038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 40
               

               Conread position:
               51-447
               

               Cow position:
               chr18:33064798-33064400 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               15, 9
               

               Conread position:
               54-447
               

               Cow position:
               chr18:56434105-56434500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 61
               

               Conread position:
               58-449
               

               Cow position:
               chr18:51368202-51367809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               146, 171
               

               Conread position:
               60-447
               

               Cow position:
               chr18:53559824-53560213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               55, 84
               

               Conread position:
               65-440
               

               Cow position:
               chr18:51368616-51368236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               241
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               56, 45
               

               Conread position:
               65-451
               

               Cow position:
               chr18:43048741-43048353 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               143, 164
               

               Conread position:
               68-425
               

               Cow position:
               chr18:50083860-50084220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               363
               

               Alignm identity:
               230
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               219, 226
               

               Conread position:
               68-447
               

               Cow position:
               chr18:50099805-50100186 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               245
               

               Alignm E-value:
               8e-32
               

               Alignm gaps (pig, cow):
               223, 326
               

               Conread position:
               68-455
               

               Cow position:
               chr18:50099217-50099606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               245
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               228, 237
               

               Conread position:
               68-456
               

               Cow position:
               chr18:42791542-42791932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               20, 14
               

               Conread position:
               68-466
               

               Cow position:
               chr18:50059297-50058898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               132, 142
               

               Conread position:
               72-447
               

               Cow position:
               chr18:56128703-56129079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               230, 279
               

               Conread position:
               72-451
               

               Cow position:
               chr18:50021818-50021434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               52, 361
               

               Conread position:
               73-456
               

               Cow position:
               chr18:42744722-42744337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               258
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               77-442
               

               Cow position:
               chr18:51367596-51367229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               237
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               58, 33
               

               Conread position:
               80-442
               

               Cow position:
               chr18:51789135-51788771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               137, 128
               

               Conread position:
               80-447
               

               Cow position:
               chr18:44398438-44398068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               14, 306
               

               Conread position:
               84-451
               

               Cow position:
               chr18:55523314-55523683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               53, 44
               

               Conread position:
               86-420
               

               Cow position:
               chr18:50271805-50272142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               219
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               130, 109
               

               Conread position:
               87-459
               

               Cow position:
               chr18:55008820-55009194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               51, 68
               

               Conread position:
               90-447
               

               Cow position:
               chr18:50246005-50246364 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               202, 304
               

               Conread position:
               92-438
               

               Cow position:
               chr18:51839127-51838779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               178, 182
               

               Conread position:
               95-367
               

               Cow position:
               chr18:43094060-43093786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               27, 36
               

               Conread position:
               96-442
               

               Cow position:
               chr18:51874160-51874506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               32, 14
               

               Conread position:
               102-451
               

               Cow position:
               chr18:43094135-43093787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               190, 44
               

               Conread position:
               132-446
               

               Cow position:
               chr18:44184916-44184600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               158, 298
               

               Conread position:
               135-442
               

               Cow position:
               chr18:51969398-51969705 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               76, 90
               

               Conread position:
               142-447
               

               Cow position:
               chr18:41949368-41949062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               69, 87
               

               Conread position:
               142-447
               

               Cow position:
               chr18:53635392-53635086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               160, 209
               

               Conread position:
               142-456
               

               Cow position:
               chr18:50848735-50849051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               204
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               84, 68
               

               Conread position:
               143-451
               

               Cow position:
               chr18:42675340-42675030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               146, 287
               

               Conread position:
               144-408
               

               Cow position:
               chr18:51765176-51764909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               173
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               146, 236
               

               Conread position:
               150-456
               

               Cow position:
               chr18:43048740-43048432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               65, 79
               

               Conread position:
               152-453
               

               Cow position:
               chr18:53525765-53526069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               6, 122
               

               Conread position:
               155-442
               

               Cow position:
               chr18:14453295-14453006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               191
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               141, 275
               

               Conread position:
               155-451
               

               Cow position:
               chr18:49022807-49023105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               188
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               137, 242
               

               Conread position:
               155-451
               

               Cow position:
               chr18:51874301-51874599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               137, 270
               

               Conread position:
               156-410
               

               Cow position:
               chr18:56248165-56247908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               71, 52
               

               Conread position:
               228-442
               

               Cow position:
               chr18:42837954-42837738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               68, 202
               

               Conread position:
               235-446
               

               Cow position:
               chr18:56247740-56247527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               61, 195
               

               Conread position:
               240-451
               

               Cow position:
               chr18:14453294-14453081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 144
               

               Conread position:
               1-286
               

               Cow position:
               chr19:23614783-23615068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-289
               

               Cow position:
               chr19:23650149-23650437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-408
               

               Cow position:
               chr19:23597288-23597698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               1-415
               

               Cow position:
               chr19:43570049-43569634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               255
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-418
               

               Cow position:
               chr19:20635458-20635038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               271
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               1-425
               

               Cow position:
               chr19:20678378-20678802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               274
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-442
               

               Cow position:
               chr19:14960384-14959943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               44, 34
               

               Conread position:
               1-446
               

               Cow position:
               chr19:14940331-14940778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-446
               

               Cow position:
               chr19:14940499-14940946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 66
               

               Conread position:
               1-447
               

               Cow position:
               chr19:14940079-14940527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               123, 144
               

               Conread position:
               1-447
               

               Cow position:
               chr19:20635542-20635095 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               1-447
               

               Cow position:
               chr19:23613775-23614222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               1-447
               

               Cow position:
               chr19:23614279-23614727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               282
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               1-447
               

               Cow position:
               chr19:43570217-43569769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               1-451
               

               Cow position:
               chr19:14940583-14941035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               275
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr19:14960300-14959850 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               283
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr19:20635626-20635174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               292
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr19:20677454-20677906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               287
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               121, 136
               

               Conread position:
               1-451
               

               Cow position:
               chr19:20677958-20678410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 59
               

               Conread position:
               1-451
               

               Cow position:
               chr19:23613355-23613807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 34
               

               Conread position:
               1-451
               

               Cow position:
               chr19:23614363-23614815 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               58, 42
               

               Conread position:
               1-451
               

               Cow position:
               chr19:23614615-23615067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               69, 34
               

               Conread position:
               1-452
               

               Cow position:
               chr19:23613523-23613976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               299
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-453
               

               Cow position:
               chr19:23649729-23650183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               293
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               3-379
               

               Cow position:
               chr19:14940669-14941048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               3-438
               

               Cow position:
               chr19:23614701-23615136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               282
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               34, 63
               

               Conread position:
               3-445
               

               Cow position:
               chr19:23613945-23614389 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               3-446
               

               Cow position:
               chr19:23597206-23597651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               32, 43
               

               Conread position:
               3-447
               

               Cow position:
               chr19:23613693-23614139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 36
               

               Conread position:
               3-451
               

               Cow position:
               chr19:20677708-20678158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 56
               

               Conread position:
               3-451
               

               Cow position:
               chr19:23649563-23650013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               29, 57
               

               Conread position:
               4-425
               

               Cow position:
               chr19:23649984-23650408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               33, 46
               

               Conread position:
               5-451
               

               Cow position:
               chr19:23597040-23597488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               6-492
               

               Cow position:
               chr19:20678215-20678703 (view UCSC Genome Browser custom track)
               

               Alignm length:
               491
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 55
               

               Conread position:
               12-451
               

               Cow position:
               chr19:14940006-14940447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               277
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               25, 44
               

               Conread position:
               21-451
               

               Cow position:
               chr19:20677309-20677738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               270
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               13, 42
               

               Conread position:
               46-447
               

               Cow position:
               chr19:23614493-23614895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               258
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               244, 19
               

               Conread position:
               58-447
               

               Cow position:
               chr19:23649453-23649841 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               239
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               232, 12
               

               Conread position:
               65-446
               

               Cow position:
               chr19:43570237-43569854 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               205, 209
               

               Conread position:
               72-452
               

               Cow position:
               chr19:14948470-14948091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               244
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               128, 18
               

               Conread position:
               87-451
               

               Cow position:
               chr19:14939997-14940363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               245
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               29, 68
               

               Conread position:
               99-451
               

               Cow position:
               chr19:14959305-14958957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               219
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               130, 111
               

               Conread position:
               149-492
               

               Cow position:
               chr19:43570395-43570060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               220
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 57
               

               Conread position:
               228-447
               

               Cow position:
               chr19:14960409-14960189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               68, 202
               

               Conread position:
               231-447
               

               Cow position:
               chr19:23613332-23613550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               12, 159
               

               Conread position:
               3-418
               

               Cow position:
               chr21:34223045-34222627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               28, 38
               

               Conread position:
               225-451
               

               Cow position:
               chr21:34223075-34222847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               45, 49
               

               Conread position:
               1-369
               

               Cow position:
               chr22:14468400-14468761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               34, 45
               

               Conread position:
               1-380
               

               Cow position:
               chr22:12385325-12384943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               251
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               36, 48
               

               Conread position:
               1-421
               

               Cow position:
               chr22:12475712-12475289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               288
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               38, 46
               

               Conread position:
               1-421
               

               Cow position:
               chr22:12499547-12499970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               36, 46
               

               Conread position:
               1-446
               

               Cow position:
               chr22:14442133-14442580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               281
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               53, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr22:12399587-12399139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               1-447
               

               Cow position:
               chr22:12431147-12430699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               291, 387
               

               Conread position:
               1-447
               

               Cow position:
               chr22:12431987-12431539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               295, 429
               

               Conread position:
               1-447
               

               Cow position:
               chr22:12432071-12431623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               60, 53
               

               Conread position:
               1-447
               

               Cow position:
               chr22:12432323-12431876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               295
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               223, 203
               

               Conread position:
               1-447
               

               Cow position:
               chr22:14430323-14430771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               292
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               36, 50
               

               Conread position:
               1-451
               

               Cow position:
               chr22:11640947-11641399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               44, 59
               

               Conread position:
               1-451
               

               Cow position:
               chr22:12385409-12384957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr22:12399335-12398883 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr22:12476216-12475764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-451
               

               Cow position:
               chr22:14429651-14430103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               219, 228
               

               Conread position:
               1-451
               

               Cow position:
               chr22:14468064-14468516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               49, 31
               

               Conread position:
               1-454
               

               Cow position:
               chr22:12431231-12430777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               295
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               30, 43
               

               Conread position:
               1-456
               

               Cow position:
               chr22:12399671-12399214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               291
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               1-461
               

               Cow position:
               chr22:12499043-12499507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               471
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               2-408
               

               Cow position:
               chr22:12399166-12398757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               33, 47
               

               Conread position:
               2-451
               

               Cow position:
               chr22:14430072-14430523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 135
               

               Conread position:
               3-368
               

               Cow position:
               chr22:14468318-14468685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               136, 151
               

               Conread position:
               3-419
               

               Cow position:
               chr22:14468234-14468653 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               128, 154
               

               Conread position:
               3-420
               

               Cow position:
               chr22:11641033-11641453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               44, 69
               

               Conread position:
               3-428
               

               Cow position:
               chr22:46654356-46654784 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               266
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               3-440
               

               Cow position:
               chr22:11640697-11641136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 58
               

               Conread position:
               3-446
               

               Cow position:
               chr22:11640865-11641310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               3-447
               

               Cow position:
               chr22:14429989-14430435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 151
               

               Conread position:
               3-451
               

               Cow position:
               chr22:12476046-12475596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               293, 378
               

               Conread position:
               3-452
               

               Cow position:
               chr22:14468150-14468601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 122
               

               Conread position:
               3-453
               

               Cow position:
               chr22:12458265-12457813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               293
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               34, 70
               

               Conread position:
               3-458
               

               Cow position:
               chr22:12475878-12475421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               3-459
               

               Cow position:
               chr22:12499381-12499839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               464
               

               Alignm identity:
               300
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               34, 44
               

               Conread position:
               3-459
               

               Cow position:
               chr22:46654188-46654646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               58, 51
               

               Conread position:
               3-461
               

               Cow position:
               chr22:12431733-12431275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               287
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               271, 266
               

               Conread position:
               3-492
               

               Cow position:
               chr22:14429737-14430228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               495
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 34
               

               Conread position:
               4-447
               

               Cow position:
               chr22:12431396-12430952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               210, 202
               

               Conread position:
               5-447
               

               Cow position:
               chr22:14467984-14468428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               6-442
               

               Cow position:
               chr22:14430580-14431011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               139, 118
               

               Conread position:
               6-447
               

               Cow position:
               chr22:12458598-12458155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               31, 44
               

               Conread position:
               10-422
               

               Cow position:
               chr22:12458174-12457759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               259
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               113, 126
               

               Conread position:
               11-452
               

               Cow position:
               chr22:14441975-14442418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               34, 46
               

               Conread position:
               52-451
               

               Cow position:
               chr22:12458635-12458235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               244, 13
               

               Conread position:
               60-447
               

               Cow position:
               chr22:46654077-46654466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               243
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               236, 368
               

               Conread position:
               72-451
               

               Cow position:
               chr22:11666523-11666904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               243
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               51, 67
               

               Conread position:
               85-442
               

               Cow position:
               chr22:12399839-12399480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               135, 143
               

               Conread position:
               86-451
               

               Cow position:
               chr22:12385662-12385293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               237
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               46, 28
               

               Conread position:
               90-442
               

               Cow position:
               chr22:12498880-12499234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               230
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               54, 27
               

               Conread position:
               90-456
               

               Cow position:
               chr22:12432486-12432118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               202, 340
               

               Conread position:
               105-452
               

               Cow position:
               chr22:14468000-14468349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               228
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               185, 262
               

               Conread position:
               113-371
               

               Cow position:
               chr22:12545594-12545856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               171
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               21, 35
               

               Conread position:
               143-461
               

               Cow position:
               chr22:14467954-14468274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               149, 287
               

               Conread position:
               166-447
               

               Cow position:
               chr22:12432494-12432212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               126, 264
               

               Conread position:
               1-288
               

               Cow position:
               chr23:24522479-24522192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               46, 55
               

               Conread position:
               1-327
               

               Cow position:
               chr23:25660408-25660737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-410
               

               Cow position:
               chr23:25660324-25660736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               45, 34
               

               Conread position:
               1-411
               

               Cow position:
               chr23:24547073-24546660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               1-428
               

               Cow position:
               chr23:24639557-24639987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               274
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               44, 60
               

               Conread position:
               1-446
               

               Cow position:
               chr23:25626287-25626731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-447
               

               Cow position:
               chr23:24560717-24560269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               275
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               46, 60
               

               Conread position:
               2-419
               

               Cow position:
               chr23:24560548-24560128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               35, 64
               

               Conread position:
               3-338
               

               Cow position:
               chr23:24560463-24560125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               213
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               42, 63
               

               Conread position:
               3-369
               

               Cow position:
               chr23:24522561-24522192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               230
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               34, 56
               

               Conread position:
               4-438
               

               Cow position:
               chr23:24626316-24626750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               273
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               33, 62
               

               Conread position:
               5-380
               

               Cow position:
               chr23:24654042-24654419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               26, 56
               

               Conread position:
               5-418
               

               Cow position:
               chr23:24535868-24535452 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               130, 105
               

               Conread position:
               5-436
               

               Cow position:
               chr23:25626543-25626973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               279
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               220, 30
               

               Conread position:
               7-447
               

               Cow position:
               chr23:24560879-24560437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 53
               

               Conread position:
               10-425
               

               Cow position:
               chr23:25660165-25660583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               49, 38
               

               Conread position:
               10-447
               

               Cow position:
               chr23:24536031-24535592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               274
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               29, 51
               

               Conread position:
               10-447
               

               Cow position:
               chr23:24639230-24639669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               264
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               39, 25
               

               Conread position:
               18-407
               

               Cow position:
               chr23:25724105-25723713 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               21, 41
               

               Conread position:
               65-451
               

               Cow position:
               chr23:24547261-24546873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               247
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               231, 365
               

               Conread position:
               72-451
               

               Cow position:
               chr23:24522823-24522447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               52, 33
               

               Conread position:
               79-446
               

               Cow position:
               chr23:24547331-24546962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               240
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               57, 31
               

               Conread position:
               90-447
               

               Cow position:
               chr23:24639226-24639585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               234
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               32, 55
               

               Conread position:
               135-451
               

               Cow position:
               chr23:24626279-24626597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               209
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               164-451
               

               Cow position:
               chr23:25626030-25626319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               128, 265
               

               Conread position:
               1-410
               

               Cow position:
               chr24:17077921-17077509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-433
               

               Cow position:
               chr24:17035954-17035520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               276
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               38, 65
               

               Conread position:
               1-446
               

               Cow position:
               chr24:17035702-17035255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr24:17036290-17035838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               280
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 65
               

               Conread position:
               2-451
               

               Cow position:
               chr24:17070548-17070999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               285
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               35, 59
               

               Conread position:
               5-451
               

               Cow position:
               chr24:17070467-17070915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               32, 61
               

               Conread position:
               21-451
               

               Cow position:
               chr24:17078153-17077721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               267
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 39
               

               Conread position:
               71-447
               

               Cow position:
               chr24:17035464-17035087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               238
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               146, 157
               

               Conread position:
               72-337
               

               Cow position:
               chr24:17035295-17035027 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               216, 0
               

               Conread position:
               72-369
               

               Cow position:
               chr24:17036135-17035835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               145, 157
               

               Conread position:
               91-441
               

               Cow position:
               chr24:17013174-17013525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               219, 316
               

               Conread position:
               1-362
               

               Cow position:
               chr25:33157133-33156770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               58, 53
               

               Conread position:
               1-367
               

               Cow position:
               chr25:23420471-23420840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               226
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-418
               

               Cow position:
               chr25:36801547-36801967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               44, 67
               

               Conread position:
               1-446
               

               Cow position:
               chr25:33298567-33299014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               457
               

               Alignm identity:
               278
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               1-446
               

               Cow position:
               chr25:33298651-33299098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               35, 43
               

               Conread position:
               1-446
               

               Cow position:
               chr25:33298987-33299434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               274
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               1-446
               

               Cow position:
               chr25:34447110-34447557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               1-446
               

               Cow position:
               chr25:34770036-34769589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               289
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               1-446
               

               Cow position:
               chr25:36800719-36801166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               36, 60
               

               Conread position:
               1-447
               

               Cow position:
               chr25:34769700-34769252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               286
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               1-451
               

               Cow position:
               chr25:23420387-23420839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr25:33144937-33145386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               282
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               36, 59
               

               Conread position:
               1-451
               

               Cow position:
               chr25:33305398-33304950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               287
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               35, 52
               

               Conread position:
               2-442
               

               Cow position:
               chr25:34447363-34447798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               43, 71
               

               Conread position:
               2-451
               

               Cow position:
               chr25:33298904-33299355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               43, 54
               

               Conread position:
               3-368
               

               Cow position:
               chr25:33299493-33299856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               31, 58
               

               Conread position:
               3-408
               

               Cow position:
               chr25:33145023-33145428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               264
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               36, 16
               

               Conread position:
               3-418
               

               Cow position:
               chr25:33299409-33299827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               264
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               36, 70
               

               Conread position:
               3-447
               

               Cow position:
               chr25:33157215-33156770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               276
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               56, 51
               

               Conread position:
               3-447
               

               Cow position:
               chr25:33299325-33299771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               280
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               3-451
               

               Cow position:
               chr25:33157467-33157017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               56, 51
               

               Conread position:
               3-452
               

               Cow position:
               chr25:36800637-36801088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 63
               

               Conread position:
               3-456
               

               Cow position:
               chr25:33299241-33299696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               33, 58
               

               Conread position:
               6-447
               

               Cow position:
               chr25:36801468-36801911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               74, 29
               

               Conread position:
               87-402
               

               Cow position:
               chr25:366731-367049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               212, 0
               

               Conread position:
               143-423
               

               Cow position:
               chr25:326985-327268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               162, 0
               

               Conread position:
               228-451
               

               Cow position:
               chr25:33127781-33128006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               64, 202
               

               Conread position:
               230-451
               

               Cow position:
               chr25:34433001-34433224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 200
               

               Conread position:
               232-445
               

               Cow position:
               chr25:22235896-22236111 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               58, 197
               

               Conread position:
               234-447
               

               Cow position:
               chr25:326992-327208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               65, 161
               

               Conread position:
               1-475
               

               Cow position:
               chr27:21616018-21615542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               482
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               44, 55
               

               Conread position:
               1-287
               

               Cow position:
               chr28:7758008-7758294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               33, 60
               

               Conread position:
               1-419
               

               Cow position:
               chr28:9253191-9253612 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               266
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               1-420
               

               Cow position:
               chr28:7757672-7758094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               263
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 58
               

               Conread position:
               1-447
               

               Cow position:
               chr28:7757756-7758203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               35, 65
               

               Conread position:
               1-451
               

               Cow position:
               chr28:9253107-9253559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               294
               

               Alignm E-value:
               9e-38
               

               Alignm gaps (pig, cow):
               36, 58
               

               Conread position:
               1-451
               

               Cow position:
               chr28:9298656-9299103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               460
               

               Alignm identity:
               280
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 9
               

               Conread position:
               1-458
               

               Cow position:
               chr28:9253023-9253482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               290
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               32, 56
               

               Conread position:
               2-369
               

               Cow position:
               chr28:9290257-9290625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 33
               

               Conread position:
               3-362
               

               Cow position:
               chr28:7758414-7758776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               232
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               34, 68
               

               Conread position:
               5-447
               

               Cow position:
               chr28:7757508-7757952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               6-355
               

               Cow position:
               chr28:9290345-9290695 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               39, 32
               

               Conread position:
               18-433
               

               Cow position:
               chr28:7810528-7810945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               262
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               27, 48
               
65-447UCSC Genome Browser
               Conread position:
               
               

               Cow position:
               chr28:11334153-11333769 (view  custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               129, 164
               
90-369UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chr28:34673364-34673646 (view  custom track)

               
               
               
Alignm length: 284

               
               
               
Alignm identity: 180

               
               
               
Alignm E-value: 6e-23

               
               
               
Alignm gaps (pig, cow): 28, 20
91-456UCSC Genome Browser
               
               
               
Conread position: 

               
               
               
Cow position: chr28:7758334-7758701 (view  custom track)

               
               
               
Alignm length: 369

               
               
               
Alignm identity: 205

               
               
               
Alignm E-value: 1e-30

               
               
               
Alignm gaps (pig, cow): 201, 339

               
               
               Conread position:143-447
               
               
               Cow position:chr28:7757478-7757784 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:197
               
               
               Alignm E-value:8e-26
               
               
               Alignm gaps (pig, cow):147, 239

               
               
               Conread position:187-428
               
               
               Cow position:chr28:7810286-7810530 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:247
               
               
               Alignm identity:163
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):13, 21

               
               
               Conread position:67-419
               
               
               Cow position:chr29:39627189-39626835 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:358
               
               
               Alignm identity:226
               
               
               Alignm E-value:1e-28
               
               
               Alignm gaps (pig, cow):153, 162

               
               
               Conread position:134-447
               
               
               Cow position:chr29:39627206-39626891 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:319
               
               
               Alignm identity:208
               
               
               Alignm E-value:6e-31
               
               
               Alignm gaps (pig, cow):102, 72

               
               
               Conread position:1-451
               
               
               Cow position:chr4:42314529-42314077 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:457
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):54, 34

               
               
               Conread position:1-451
               
               
               Cow position:chr4:42315032-42314582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:459
               
               
               Alignm identity:297
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):67, 57

               
               
               Conread position:1-451
               
               
               Cow position:chr4:42315200-42314748 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:457
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):43, 61

               
               
               Conread position:1-492
               
               
               Cow position:chr4:42314109-42313623 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:494
               
               
               Alignm identity:388
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):232, 183

               
               
               Conread position:3-447
               
               
               Cow position:chr4:42314778-42314335 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 42

               
               
               Conread position:6-447
               
               
               Cow position:chr4:42314440-42313997 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:286
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):29, 43

               
               
               Conread position:72-451
               
               
               Cow position:chr4:42314122-42313746 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:385
               
               
               Alignm identity:236
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):216, 196

               
               
               Conread position:90-425
               
               
               Cow position:chr4:42314272-42313934 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:342
               
               
               Alignm identity:221
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):54, 45

               
               
               Conread position:90-492
               
               
               Cow position:chr4:42315361-42314959 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:408
               
               
               Alignm identity:258
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):109, 74

               
               
               Conread position:165-447
               
               
               Cow position:chr4:42315370-42315088 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:286
               
               
               Alignm identity:184
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):118, 86

               
               
               Conread position:1-425
               
               
               Cow position:chr6:49340996-49341423 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:430
               
               
               Alignm identity:272
               
               
               Alignm E-value:7e-39
               
               
               Alignm gaps (pig, cow):60, 56

               
               
               Conread position:1-447
               
               
               Cow position:chr6:49395883-49396325 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:280
               
               
               Alignm E-value:9e-31
               
               
               Alignm gaps (pig, cow):207, 218

               
               
               Conread position:3-451
               
               
               Cow position:chr6:49340662-49341112 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:278
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):34, 64

               
               
               Conread position:3-454
               
               
               Cow position:chr6:49340410-49340862 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:458
               
               
               Alignm identity:280
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):48, 63

               
               
               Conread position:135-446
               
               
               Cow position:chr6:49396263-49396576 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:320
               
               
               Alignm identity:207
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):23, 18

               
               
               Conread position:140-418
               
               
               Cow position:chr6:49340381-49340660 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:282
               
               
               Alignm identity:181
               
               
               Alignm E-value:1e-24
               
               
               Alignm gaps (pig, cow):150, 12

               
               
               Conread position:234-451
               
               
               Cow position:chr6:49340389-49340608 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:221
               
               
               Alignm identity:149
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):75, 195

               
               
               Conread position:1-244
               
               
               Cow position:chr7:11434483-11434240 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:246
               
               
               Alignm identity:167
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):73, 57

               
               
               Conread position:1-370
               
               
               Cow position:chr7:42878684-42878312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:235
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):44, 65

               
               
               Conread position:1-374
               
               
               Cow position:chr7:8278356-8278723 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:380
               
               
               Alignm identity:248
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):112, 97

               
               
               Conread position:1-394
               
               
               Cow position:chr7:11434644-11434255 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:400
               
               
               Alignm identity:267
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):72, 57

               
               
               Conread position:1-438
               
               
               Cow position:chr7:8243894-8244312 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:442
               
               
               Alignm identity:285
               
               
               Alignm E-value:3e-32
               
               
               Alignm gaps (pig, cow):209, 101

               
               
               Conread position:1-442
               
               
               Cow position:chr7:18390166-18390609 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:272
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):198, 228

               
               
               Conread position:1-447
               
               
               Cow position:chr7:1014445-1014887 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:281
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):36, 59

               
               
               Conread position:1-447
               
               
               Cow position:chr7:11600931-11600484 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:275
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):44, 34

               
               
               Conread position:1-447
               
               
               Cow position:chr7:11601099-11600652 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:290
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):33, 59

               
               
               Conread position:1-451
               
               
               Cow position:chr7:1014943-1015395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:277
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):49, 59

               
               
               Conread position:1-451
               
               
               Cow position:chr7:1015027-1015481 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:460
               
               
               Alignm identity:289
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):36, 65

               
               
               Conread position:1-451
               
               
               Cow position:chr7:8242887-8243339 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:291
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):198, 243

               
               
               Conread position:1-451
               
               
               Cow position:chr7:8243055-8243506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):42, 61

               
               
               Conread position:1-451
               
               
               Cow position:chr7:8243474-8243926 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:307
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):45, 34

               
               
               Conread position:1-451
               
               
               Cow position:chr7:8243642-8244091 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:458
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):34, 46

               
               
               Conread position:1-451
               
               
               Cow position:chr7:8324905-8325357 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:306
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):297, 378

               
               
               Conread position:1-451
               
               
               Cow position:chr7:8325409-8325861 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:314
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):51, 34

               
               
               Conread position:1-451
               
               
               Cow position:chr7:8325661-8326113 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:324
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):50, 37

               
               
               Conread position:1-451
               
               
               Cow position:chr7:11601183-11600731 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:272
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):51, 58

               
               
               Conread position:1-451
               
               
               Cow position:chr7:42879020-42878568 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:283
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):35, 65

               
               
               Conread position:1-456
               
               
               Cow position:chr7:42878936-42878479 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:461
               
               
               Alignm identity:281
               
               
               Alignm E-value:3e-31
               
               
               Alignm gaps (pig, cow):44, 66

               
               
               Conread position:1-458
               
               
               Cow position:chr7:42879272-42878813 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:466
               
               
               Alignm identity:287
               
               
               Alignm E-value:3e-30
               
               
               Alignm gaps (pig, cow):44, 68

               
               
               Conread position:1-463
               
               
               Cow position:chr7:8277684-8278146 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:467
               
               
               Alignm identity:296
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):292, 382

               
               
               Conread position:1-463
               
               
               Cow position:chr7:8278272-8278725 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:469
               
               
               Alignm identity:285
               
               
               Alignm E-value:4e-23
               
               
               Alignm gaps (pig, cow):53, 60

               
               
               Conread position:1-487
               
               
               Cow position:chr7:8243307-8243794 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:492
               
               
               Alignm identity:318
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 57

               
               
               Conread position:1-491
               
               
               Cow position:chr7:3180373-3180864 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:497
               
               
               Alignm identity:315
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):42, 60

               
               
               Conread position:1-492
               
               
               Cow position:chr7:8277432-8277925 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:495
               
               
               Alignm identity:332
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):292, 429

               
               
               Conread position:1-492
               
               
               Cow position:chr7:8277936-8278429 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:498
               
               
               Alignm identity:321
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):128, 136

               
               
               Conread position:1-492
               
               
               Cow position:chr7:8325073-8325566 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:497
               
               
               Alignm identity:322
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):52, 34

               
               
               Conread position:1-492
               
               
               Cow position:chr7:8325157-8325650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:497
               
               
               Alignm identity:348
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):292, 429

               
               
               Conread position:1-492
               
               
               Cow position:chr7:8325577-8326070 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:499
               
               
               Alignm identity:345
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):69, 34

               
               
               Conread position:1-492
               
               
               Cow position:chr7:8325829-8326319 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:501
               
               
               Alignm identity:310
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):156, 151

               
               
               Conread position:2-447
               
               
               Cow position:chr7:3179954-3180401 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:287
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):43, 38

               
               
               Conread position:2-447
               
               
               Cow position:chr7:8242804-8243251 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:290
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):68, 56

               
               
               Conread position:2-450
               
               
               Cow position:chr7:8277853-8278303 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:457
               
               
               Alignm identity:297
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):54, 59

               
               
               Conread position:2-451
               
               
               Cow position:chr7:11434811-11434367 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:294
               
               
               Alignm E-value:3.00018e-42
               
               
               Alignm gaps (pig, cow):94, 82

               
               
               Conread position:2-451
               
               
               Cow position:chr7:18389999-18390450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:461
               
               
               Alignm identity:286
               
               
               Alignm E-value:6e-27
               
               
               Alignm gaps (pig, cow):31, 42

               
               
               Conread position:3-324
               
               
               Cow position:chr7:11600761-11600437 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:329
               
               
               Alignm identity:221
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):34, 56

               
               
               Conread position:3-428
               
               
               Cow position:chr7:8278022-8278450 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:431
               
               
               Alignm identity:278
               
               
               Alignm E-value:9.94922e-44
               
               
               Alignm gaps (pig, cow):280, 381

               
               
               Conread position:3-447
               
               
               Cow position:chr7:18390336-18390782 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:283
               
               
               Alignm E-value:6e-38
               
               
               Alignm gaps (pig, cow):40, 70

               
               
               Conread position:3-451
               
               
               Cow position:chr7:8277770-8278220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:309
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):48, 32

               
               
               Conread position:3-456
               
               
               Cow position:chr7:42878850-42878395 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:460
               
               
               Alignm identity:283
               
               
               Alignm E-value:1e-32
               
               
               Alignm gaps (pig, cow):33, 58

               
               
               Conread position:3-460
               
               
               Cow position:chr7:3180039-3180496 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:465
               
               
               Alignm identity:300
               
               
               Alignm E-value:1.00053e-42
               
               
               Alignm gaps (pig, cow):34, 56

               
               
               Conread position:3-475
               
               
               Cow position:chr7:8324739-8325213 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:478
               
               
               Alignm identity:316
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):75, 32

               
               
               Conread position:3-491
               
               
               Cow position:chr7:8277266-8277756 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:495
               
               
               Alignm identity:303
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):70, 38

               
               
               Conread position:4-447
               
               
               Cow position:chr7:1014694-1015139 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:297
               
               
               Alignm E-value:4.06377e-44
               
               
               Alignm gaps (pig, cow):33, 42

               
               
               Conread position:6-451
               
               
               Cow position:chr7:1439817-1440262 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:269
               
               
               Alignm E-value:2e-28
               
               
               Alignm gaps (pig, cow):293, 54

               
               
               Conread position:14-324
               
               
               Cow position:chr7:8244144-8244454 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:316
               
               
               Alignm identity:205
               
               
               Alignm E-value:2e-27
               
               
               Alignm gaps (pig, cow):253, 21

               
               
               Conread position:72-445
               
               
               Cow position:chr7:1014846-1015221 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:377
               
               
               Alignm identity:249
               
               
               Alignm E-value:9.80909e-45
               
               
               Alignm gaps (pig, cow):230, 358

               
               
               Conread position:72-488
               
               
               Cow position:chr7:11434657-11434247 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:420
               
               
               Alignm identity:286
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):223, 118

               
               
               Conread position:73-341
               
               
               Cow position:chr7:11434824-11434553 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:273
               
               
               Alignm identity:190
               
               
               Alignm E-value:5e-37
               
               
               Alignm gaps (pig, cow):108, 103

               
               
               Conread position:86-492
               
               
               Cow position:chr7:8242804-8243212 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:410
               
               
               Alignm identity:277
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):204, 344

               
               
               Conread position:89-451
               
               
               Cow position:chr7:3179705-3180069 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:236
               
               
               Alignm E-value:1e-33
               
               
               Alignm gaps (pig, cow):139, 118

               
               
               Conread position:90-433
               
               
               Cow position:chr7:11601261-11600917 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:350
               
               
               Alignm identity:228
               
               
               Alignm E-value:1e-31
               
               
               Alignm gaps (pig, cow):35, 41

               
               
               Conread position:155-447
               
               
               Cow position:chr7:1439460-1439757 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:302
               
               
               Alignm identity:196
               
               
               Alignm E-value:1e-21
               
               
               Alignm gaps (pig, cow):66, 50

               
               
               Conread position:161-465
               
               
               Cow position:chr7:8277256-8277563 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:309
               
               
               Alignm identity:204
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):133, 269

               
               
               Conread position:162-491
               
               
               Cow position:chr7:8324731-8325061 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:337
               
               
               Alignm identity:225
               
               
               Alignm E-value:4e-33
               
               
               Alignm gaps (pig, cow):128, 5

               
               
               Conread position:164-451
               
               
               Cow position:chr7:1014272-1014561 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:188
               
               
               Alignm E-value:2e-25
               
               
               Alignm gaps (pig, cow):57, 42

               
               
               Conread position:243-451
               
               
               Cow position:chr7:1014267-1014477 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:212
               
               
               Alignm identity:141
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):49, 187

               
               
               Conread position:245-411
               
               
               Cow position:chr7:11434974-11434806 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:170
               
               
               Alignm identity:123
               
               
               Alignm E-value:1e-23
               
               
               Alignm gaps (pig, cow):48, 162

               
               
               Conread position:245-492
               
               
               Cow position:chr7:8324729-8324978 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:252
               
               
               Alignm identity:163
               
               
               Alignm E-value:9e-21
               
               
               Alignm gaps (pig, cow):47, 136

               
               
               Conread position:1-445
               
               
               Cow position:chr8:55580910-55581356 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:286
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):44, 34

               
               
               Conread position:1-446
               
               
               Cow position:chr8:45200938-45201385 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:287
               
               
               Alignm E-value:2.94273e-44
               
               
               Alignm gaps (pig, cow):46, 65

               
               
               Conread position:1-446
               
               
               Cow position:chr8:46816721-46817168 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:454
               
               
               Alignm identity:286
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):44, 68

               
               
               Conread position:1-446
               
               
               Cow position:chr8:55581246-55581693 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:280
               
               
               Alignm E-value:4e-35
               
               
               Alignm gaps (pig, cow):36, 65

               
               
               Conread position:1-447
               
               
               Cow position:chr8:45201022-45201470 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:297
               
               
               Alignm E-value:2.99878e-43
               
               
               Alignm gaps (pig, cow):69, 34

               
               
               Conread position:1-447
               
               
               Cow position:chr8:45201190-45201637 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:277
               
               
               Alignm E-value:6e-29
               
               
               Alignm gaps (pig, cow):72, 42

               
               
               Conread position:1-447
               
               
               Cow position:chr8:46816133-46816581 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:296
               
               
               Alignm E-value:1.99993e-41
               
               
               Alignm gaps (pig, cow):65, 41

               
               
               Conread position:1-447
               
               
               Cow position:chr8:46816889-46817337 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:285
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):70, 34

               
               
               Conread position:1-451
               
               
               Cow position:chr8:48407290-48406838 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:273
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):44, 65

               
               
               Conread position:1-451
               
               
               Cow position:chr8:48407542-48407090 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:271
               
               
               Alignm E-value:1e-25
               
               
               Alignm gaps (pig, cow):65, 38

               
               
               Conread position:2-442
               
               
               Cow position:chr8:45201359-45201801 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:281
               
               
               Alignm E-value:4e-34
               
               
               Alignm gaps (pig, cow):37, 65

               
               
               Conread position:2-447
               
               
               Cow position:chr8:48406953-48406506 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:272
               
               
               Alignm E-value:6e-28
               
               
               Alignm gaps (pig, cow):29, 58

               
               
               Conread position:3-446
               
               
               Cow position:chr8:46816639-46817084 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:279
               
               
               Alignm E-value:8e-31
               
               
               Alignm gaps (pig, cow):33, 58

               
               
               Conread position:5-447
               
               
               Cow position:chr8:46816053-46816497 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:283
               
               
               Alignm E-value:1e-35
               
               
               Alignm gaps (pig, cow):56, 30

               
               
               Conread position:6-367
               
               
               Cow position:chr8:46816978-46817342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:368
               
               
               Alignm identity:229
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):55, 39

               
               
               Conread position:18-447
               
               
               Cow position:chr8:46816318-46816749 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:438
               
               
               Alignm identity:277
               
               
               Alignm E-value:1e-34
               
               
               Alignm gaps (pig, cow):43, 17

               
               
               Conread position:73-447
               
               
               Cow position:chr8:48406714-48406338 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:384
               
               
               Alignm identity:239
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):62, 52

               
               
               Conread position:134-446
               
               
               Cow position:chr8:46816014-46816328 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:317
               
               
               Alignm identity:199
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):156, 250

               
               
               Conread position:187-451
               
               
               Cow position:chr8:46815983-46816249 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:271
               
               
               Alignm identity:181
               
               
               Alignm E-value:5e-26
               
               
               Alignm gaps (pig, cow):29, 21

               
               
               Conread position:1-367
               
               
               Cow position:chrX:12627693-12628062 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:372
               
               
               Alignm identity:240
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):73, 65

               
               
               Conread position:1-428
               
               
               Cow position:chrX:29045088-29044658 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:432
               
               
               Alignm identity:272
               
               
               Alignm E-value:2e-39
               
               
               Alignm gaps (pig, cow):44, 66

               
               
               Conread position:1-440
               
               
               Cow position:chrX:25310146-25310586 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:445
               
               
               Alignm identity:280
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):49, 37

               
               
               Conread position:1-447
               
               
               Cow position:chrX:25325247-25324799 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:453
               
               
               Alignm identity:285
               
               
               Alignm E-value:1e-37
               
               
               Alignm gaps (pig, cow):51, 42

               
               
               Conread position:1-447
               
               
               Cow position:chrX:25325583-25325136 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:460
               
               
               Alignm identity:297
               
               
               Alignm E-value:9e-35
               
               
               Alignm gaps (pig, cow):39, 48

               
               
               Conread position:1-451
               
               
               Cow position:chrX:12627443-12627893 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:456
               
               
               Alignm identity:302
               
               
               Alignm E-value:0
               
               
               Alignm gaps (pig, cow):55, 34

               
               
               Conread position:1-451
               
               
               Cow position:chrX:25324743-25324291 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:457
               
               
               Alignm identity:277
               
               
               Alignm E-value:4e-28
               
               
               Alignm gaps (pig, cow):72, 34

               
               
               Conread position:1-451
               
               
               Cow position:chrX:25324911-25324459 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:458
               
               
               Alignm identity:288
               
               
               Alignm E-value:4e-37
               
               
               Alignm gaps (pig, cow):44, 65

               
               
               Conread position:1-451
               
               
               Cow position:chrX:25325163-25324711 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:457
               
               
               Alignm identity:281
               
               
               Alignm E-value:2e-32
               
               
               Alignm gaps (pig, cow):52, 32

               
               
               Conread position:2-451
               
               
               Cow position:chrX:25309979-25310430 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:455
               
               
               Alignm identity:290
               
               
               Alignm E-value:7.00649e-43
               
               
               Alignm gaps (pig, cow):58, 33

               
               
               Conread position:3-447
               
               
               Cow position:chrX:25309896-25310342 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:451
               
               
               Alignm identity:283
               
               
               Alignm E-value:1e-36
               
               
               Alignm gaps (pig, cow):42, 63

               
               
               Conread position:3-447
               
               
               Cow position:chrX:25324993-25324548 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:452
               
               
               Alignm identity:288
               
               
               Alignm E-value:4e-38
               
               
               Alignm gaps (pig, cow):58, 32

               
               
               Conread position:4-221
               
               
               Cow position:chrX:12627864-12628081 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:219
               
               
               Alignm identity:163
               
               
               Alignm E-value:5e-40
               
               
               Alignm gaps (pig, cow):48, 39

               
               
               Conread position:5-447
               
               
               Cow position:chrX:25309730-25310174 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:450
               
               
               Alignm identity:279
               
               
               Alignm E-value:7e-32
               
               
               Alignm gaps (pig, cow):31, 56

               
               
               Conread position:6-447
               
               
               Cow position:chrX:29045251-29044808 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:448
               
               
               Alignm identity:278
               
               
               Alignm E-value:8e-34
               
               
               Alignm gaps (pig, cow):39, 54

               
               
               Conread position:8-447
               
               
               Cow position:chrX:29045333-29044892 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:449
               
               
               Alignm identity:279
               
               
               Alignm E-value:2e-29
               
               
               Alignm gaps (pig, cow):60, 31

               
               
               Conread position:73-447
               
               
               Cow position:chrX:25325595-25325220 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:382
               
               
               Alignm identity:238
               
               
               Alignm E-value:3e-25
               
               
               Alignm gaps (pig, cow):63, 44

               
               
               Conread position:90-446
               
               
               Cow position:chrX:29045734-29045376 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:365
               
               
               Alignm identity:228
               
               
               Alignm E-value:2e-22
               
               
               Alignm gaps (pig, cow):138, 117

               
               
               Conread position:174-474
               
               
               Cow position:chrX:12627280-12627582 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:305
               
               
               Alignm identity:191
               
               
               Alignm E-value:7e-22
               
               
               Alignm gaps (pig, cow):109, 213
Conread position:	1-447
Cow position:	chr10:8996506-8996059 (view UCSC Genome Browser custom track)
Alignm length:	456
Alignm identity:	290
Alignm E-value:	1e-34
Alignm gaps (pig, cow):	36, 58
Conread position:	1-460
Cow position:	chr10:8996842-8996381 (view UCSC Genome Browser custom track)
Alignm length:	466
Alignm identity:	294
Alignm E-value:	2e-39
Alignm gaps (pig, cow):	180, 176
Conread position:	1-492
Cow position:	chr10:8996590-8996097 (view UCSC Genome Browser custom track)
Alignm length:	500
Alignm identity:	313
Alignm E-value:	7e-39
Alignm gaps (pig, cow):	38, 65
Conread position:	3-288
Cow position:	chr10:8996336-8996051 (view UCSC Genome Browser custom track)
Alignm length:	287
Alignm identity:	187
Alignm E-value:	3e-30
Alignm gaps (pig, cow):	42, 58
Conread position:	59-451
Cow position:	chr10:9010596-9010202 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	241
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	158, 149
Conread position:	88-445
Cow position:	chr10:9031254-9031613 (view UCSC Genome Browser custom track)
Alignm length:	363
Alignm identity:	229
Alignm E-value:	8e-30
Alignm gaps (pig, cow):	48, 36
Conread position:	134-451
Cow position:	chr10:8996877-8996558 (view UCSC Genome Browser custom track)
Alignm length:	323
Alignm identity:	215
Alignm E-value:	4e-34
Alignm gaps (pig, cow):	27, 21
Conread position:	1-336
Cow position:	chr11:74554513-74554175 (view UCSC Genome Browser custom track)
Alignm length:	343
Alignm identity:	218
Alignm E-value:	6e-25
Alignm gaps (pig, cow):	36, 49
Conread position:	3-451
Cow position:	chr11:74554679-74554229 (view UCSC Genome Browser custom track)
Alignm length:	453
Alignm identity:	274
Alignm E-value:	4e-31
Alignm gaps (pig, cow):	299, 342
Conread position:	11-451
Cow position:	chr11:74555091-74554649 (view UCSC Genome Browser custom track)
Alignm length:	448
Alignm identity:	281
Alignm E-value:	2e-35
Alignm gaps (pig, cow):	52, 24
Conread position:	1-466
Cow position:	chr13:39984407-39984872 (view UCSC Genome Browser custom track)
Alignm length:	473
Alignm identity:	310
Alignm E-value:	0
Alignm gaps (pig, cow):	34, 45
Conread position:	3-326
Cow position:	chr13:39984577-39984903 (view UCSC Genome Browser custom track)
Alignm length:	328
Alignm identity:	206
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	39, 32
Conread position:	65-451
Cow position:	chr13:39984387-39984775 (view UCSC Genome Browser custom track)
Alignm length:	391
Alignm identity:	254
Alignm E-value:	3.00004e-41
Alignm gaps (pig, cow):	145, 159
Conread position:	135-447
Cow position:	chr13:56292145-56291831 (view UCSC Genome Browser custom track)
Alignm length:	318
Alignm identity:	201
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	80, 93
Conread position:	142-451
Cow position:	chr13:56333692-56334003 (view UCSC Genome Browser custom track)
Alignm length:	315
Alignm identity:	198
Alignm E-value:	3e-22
Alignm gaps (pig, cow):	59, 86
Conread position:	1-373
Cow position:	chr14:25784358-25784733 (view UCSC Genome Browser custom track)
Alignm length:	378
Alignm identity:	232
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	36, 56
Conread position:	1-413
Cow position:	chr14:25860366-25860781 (view UCSC Genome Browser custom track)
Alignm length:	419
Alignm identity:	251
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	29, 54
Conread position:	1-427
Cow position:	chr14:25859694-25860123 (view UCSC Genome Browser custom track)
Alignm length:	433
Alignm identity:	258
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	61, 34
Conread position:	1-428
Cow position:	chr14:25836053-25836483 (view UCSC Genome Browser custom track)
Alignm length:	432
Alignm identity:	254
Alignm E-value:	8e-23
Alignm gaps (pig, cow):	36, 54
Conread position:	1-442
Cow position:	chr14:25876745-25877188 (view UCSC Genome Browser custom track)
Alignm length:	449
Alignm identity:	273
Alignm E-value:	4e-26
Alignm gaps (pig, cow):	52, 34