Cow genome map
| Conread name: | Ss1.1-rptbr0103_g24.5 |
| Conread position: | 1206-1416 |
| Cow position: | chr1:86069229-86069441 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 187, 107 |
| Conread position: | 1158-1385 |
| Cow position: | chr10:30564659-30564432 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 27, 70 |
| Conread position: | 1122-1391 |
| Cow position: | chr11:30066569-30066303 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 23 |
| Conread position: | 3-160 |
| Cow position: | chr12:7951962-7952118 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 141 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 152, 0 |
| Conread position: | 153-352 |
| Cow position: | chr12:7955504-7955703 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 351-523 |
| Cow position: | chr12:7957935-7958108 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 0 |
| Conread position: | 526-1197 |
| Cow position: | chr12:7959406-7960072 (view UCSC Genome Browser custom track) |
| Alignm length: | 693 |
| Alignm identity: | 483 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 188 |
| Conread position: | 1209-1422 |
| Cow position: | chr12:7463895-7463683 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 189, 62 |
| Conread position: | 1246-1428 |
| Cow position: | chr12:7960079-7960269 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 116, 59 |
| Conread position: | 1211-1386 |
| Cow position: | chr15:40569253-40569083 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 126 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 1142-1396 |
| Cow position: | chr16:40695247-40695511 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 10 |
| Conread position: | 1163-1352 |
| Cow position: | chr16:20655245-20655056 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 11 |
| Conread position: | 1125-1427 |
| Cow position: | chr17:8234063-8234365 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 207 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 20, 10 |
| Conread position: | 1158-1388 |
| Cow position: | chr17:3324802-3324576 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 20, 50 |
| Conread position: | 1225-1388 |
| Cow position: | chr18:55684565-55684725 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 7, 88 |
| Conread position: | 1136-1425 |
| Cow position: | chr2:81944349-81944653 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 201 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 42, 183 |
| Conread position: | 1147-1391 |
| Cow position: | chr2:63346410-63346647 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 31 |
| Conread position: | 1205-1388 |
| Cow position: | chr21:22469445-22469268 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 1162-1427 |
| Cow position: | chr22:1588787-1588529 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 35, 152 |
| Conread position: | 1151-1417 |
| Cow position: | chr26:16608269-16608021 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 59, 45 |
| Conread position: | 1196-1422 |
| Cow position: | chr26:10469987-10469760 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 197, 15 |
| Conread position: | 1205-1395 |
| Cow position: | chr28:24112337-24112147 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 175, 71 |
| Conread position: | 1147-1397 |
| Cow position: | chr4:29954018-29954272 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 32, 76 |
| Conread position: | 1142-1398 |
| Cow position: | chr5:48356934-48357198 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 1151-1422 |
| Cow position: | chr5:1333621-1333351 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 1212-1385 |
| Cow position: | chr5:70780464-70780630 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 7, 21 |
| Conread position: | 1151-1384 |
| Cow position: | chr7:31978818-31978580 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 27, 169 |
| Conread position: | 1216-1427 |
| Cow position: | chr7:44562963-44563175 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 112, 95 |
| Conread position: | 1143-1397 |
| Cow position: | chr8:38996294-38996042 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 16, 94 |
| Conread position: | 1156-1422 |
| Cow position: | chr8:42834712-42834444 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 13, 75 |
| Conread position: | 1211-1428 |
| Cow position: | chr9:11771527-11771303 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 179, 102 |
| Conread position: | 1158-1397 |
| Cow position: | chrX:37200126-37199881 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 20, 163 |