Cow genome map
| Conread name: | Ss1.1-rspc018_h23.5 |
| Conread position: | 2-188 |
| Cow position: | chr1:79233877-79233691 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 169 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-624 |
| Cow position: | chr1:79233706-79233390 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 300, 17 |
| Conread position: | 38-188 |
| Cow position: | chr11:25805964-25805814 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 445-609 |
| Cow position: | chr11:25801764-25801600 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 139 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 2-187 |
| Cow position: | chr13:31610538-31610353 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 317-624 |
| Cow position: | chr13:31610358-31610056 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 0 |
| Conread position: | 15-188 |
| Cow position: | chr15:29372324-29372154 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 324-623 |
| Cow position: | chr15:29372153-29371858 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 237, 38 |
| Conread position: | 4-184 |
| Cow position: | chr18:34575906-34575725 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 48-190 |
| Cow position: | chr18:32254935-32255077 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 134 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-455 |
| Cow position: | chr18:32255061-32255205 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 323-433 |
| Cow position: | chr18:34575721-34575611 (view UCSC Genome Browser custom track) |
| Alignm length: | 111 |
| Alignm identity: | 100 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 422-604 |
| Cow position: | chr18:34575484-34575302 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 163 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 308-624 |
| Cow position: | chr29:18378852-18379155 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 15 |
| Conread position: | 43-188 |
| Cow position: | chr3:77761901-77761755 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 13, 121 |
| Conread position: | 324-624 |
| Cow position: | chr3:77761754-77761455 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 43 |
| Conread position: | 525-606 |
| Cow position: | chr5:70686913-70686832 (view UCSC Genome Browser custom track) |
| Alignm length: | 82 |
| Alignm identity: | 73 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-187 |
| Cow position: | chr6:32977241-32977055 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 167 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 307-624 |
| Cow position: | chr6:32977070-32976752 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 296 |
| Conread position: | 397-597 |
| Cow position: | chr6:38567780-38567597 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 68, 22 |
| Conread position: | 2-187 |
| Cow position: | chr7:1320358-1320173 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 153 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 322-611 |
| Cow position: | chr7:1320173-1319895 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 42 |
| Conread position: | 3-190 |
| Cow position: | chr8:52608253-52608063 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 162 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 322-624 |
| Cow position: | chr8:52608066-52607777 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 285, 176 |
| Conread position: | 69-322 |
| Cow position: | chr9:41102738-41102991 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 320-426 |
| Cow position: | chr9:41104085-41104191 (view UCSC Genome Browser custom track) |
| Alignm length: | 107 |
| Alignm identity: | 101 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 423-527 |
| Cow position: | chr9:41104626-41104730 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 525-598 |
| Cow position: | chr9:41105753-41105826 (view UCSC Genome Browser custom track) |
| Alignm length: | 74 |
| Alignm identity: | 71 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 0, 0 |