Cow genome map


           Conread name:
           Ss1.1-rtes01_j19.5
        

               Conread position:
               1487-1642
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1465-1642
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               23, 63
               

               Conread position:
               1488-1642
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               1509-1644
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               1520-1644
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               1543-1643
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1548-1642
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               82
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               1464-1644
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               1544-1644
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               86
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               1530-1644
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-20
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1542-1644
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               85
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1450-1644
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               1465-1626
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               22, 53
               

               Conread position:
               1553-1642
               

               Cow position:
               
               

               Alignm length:
               90
               

               Alignm identity:
               77
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1543-1642
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               6-469
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 153
               

               Conread position:
               490-1456
               

               Cow position:
               
               

               Alignm length:
               994
               

               Alignm identity:
               842
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 435
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1543-1640
               

               Cow position:
               
               

               Alignm length:
               100
               

               Alignm identity:
               84
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               88
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 78
               

               Conread position:
               1545-1644
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               1553-1642
               

               Cow position:
               
               

               Alignm length:
               90
               

               Alignm identity:
               78
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1525-1644
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               1543-1641
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               1360-1644
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               7, 159
               

               Conread position:
               1484-1644
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1487-1642
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1465-1641
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               9e-23
               

               Alignm gaps (pig, cow):
               23, 125
               

               Conread position:
               1488-1644
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               38, 163
               

               Conread position:
               1543-1643
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               84
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               1486-1644
               

               Cow position:
               
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 31
               

               Conread position:
               1542-1644
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               87
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               1474-1642
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               1487-1644
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               32, 140
               

               Conread position:
               1542-1642
               

               Cow position:
               
               

               Alignm length:
               101
               

               Alignm identity:
               83
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1465-1637
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1538-1644
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               89
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1539-1642
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               85
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1543-1644
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               1488-1643
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               6-469
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               401
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 153
               

               Conread position:
               35-345
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 37
               

               Conread position:
               335-891
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               129
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               490-1441
               

               Cow position:
               
               

               Alignm length:
               980
               

               Alignm identity:
               841
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 111
               

               Conread position:
               1465-1641
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1487-1644
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               1465-1644
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               1487-1638
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               43, 32
               

               Conread position:
               1487-1644
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 31
               

               Conread position:
               1543-1642
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               1460-1644
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               1538-1640
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1452-1644
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               36, 71
               

               Conread position:
               1487-1642
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               36, 150
               

               Conread position:
               1529-1644
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               12, 0