Cow genome map
| Conread name: | Thy1-THY010063B10 |
| Conread position: | 110-324 |
| Cow position: | chr10:27252997-27252774 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 30, 112 |
| Conread position: | 159-315 |
| Cow position: | chr10:59339342-59339498 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-324 |
| Cow position: | chr10:7254459-7254620 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 159-324 |
| Cow position: | chr10:49655271-49655106 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-328 |
| Cow position: | chr10:33964136-33964305 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 159-329 |
| Cow position: | chr10:24996231-24996403 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 170 |
| Conread position: | 160-328 |
| Cow position: | chr10:33821025-33821185 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 13, 41 |
| Conread position: | 164-324 |
| Cow position: | chr10:33767483-33767325 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 170-324 |
| Cow position: | chr10:28585628-28585474 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 131 |
| Conread position: | 159-324 |
| Cow position: | chr11:8412072-8411908 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 66 |
| Conread position: | 159-324 |
| Cow position: | chr11:32645130-32645290 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 159-324 |
| Cow position: | chr11:75445580-75445746 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 159-328 |
| Cow position: | chr11:16094641-16094809 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 159-329 |
| Cow position: | chr11:52375916-52375746 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 160-321 |
| Cow position: | chr11:13483222-13483061 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 81, 93 |
| Conread position: | 160-328 |
| Cow position: | chr11:64136456-64136290 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 164-321 |
| Cow position: | chr11:40842893-40843051 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 164-328 |
| Cow position: | chr11:32594596-32594760 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 115, 144 |
| Conread position: | 164-329 |
| Cow position: | chr11:7081765-7081928 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 178-318 |
| Cow position: | chr11:72066085-72066222 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 183-328 |
| Cow position: | chr11:19668129-19667985 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 183-329 |
| Cow position: | chr11:64955734-64955589 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 201-327 |
| Cow position: | chr11:67299152-67299278 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-319 |
| Cow position: | chr11:25363295-25363410 (view UCSC Genome Browser custom track) |
| Alignm length: | 116 |
| Alignm identity: | 91 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-324 |
| Cow position: | chr11:15881946-15882066 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 93 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 164-322 |
| Cow position: | chr12:41657169-41657328 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 15, 134 |
| Conread position: | 159-313 |
| Cow position: | chr13:53101118-53101267 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 10, 19 |
| Conread position: | 159-323 |
| Cow position: | chr13:51904230-51904068 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 159-324 |
| Cow position: | chr13:52207689-52207850 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 159-328 |
| Cow position: | chr13:6027357-6027190 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 159-328 |
| Cow position: | chr13:14702846-14703014 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 121 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 124, 0 |
| Conread position: | 159-328 |
| Cow position: | chr13:18509588-18509756 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 20, 126 |
| Conread position: | 160-328 |
| Cow position: | chr13:10920546-10920381 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 139 |
| Alignm E-value: | 9e-38 |
| Alignm gaps (pig, cow): | 13, 19 |
| Conread position: | 161-329 |
| Cow position: | chr13:13256105-13256271 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 165-324 |
| Cow position: | chr13:1028316-1028474 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 204-328 |
| Cow position: | chr13:52091609-52091735 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 140-315 |
| Cow position: | chr14:50410422-50410595 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 159-303 |
| Cow position: | chr14:2346611-2346466 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 159-319 |
| Cow position: | chr14:24139815-24139974 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 114, 0 |
| Conread position: | 159-328 |
| Cow position: | chr14:4460180-4460015 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 159-328 |
| Cow position: | chr14:13712623-13712788 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 159-328 |
| Cow position: | chr14:13715724-13715563 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 159-329 |
| Cow position: | chr14:23881373-23881536 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 159-329 |
| Cow position: | chr14:32726387-32726555 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 160-328 |
| Cow position: | chr14:18211952-18211785 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 159-328 |
| Cow position: | chr15:45238930-45239093 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 159-329 |
| Cow position: | chr15:15390738-15390908 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 197-324 |
| Cow position: | chr15:19203705-19203578 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-324 |
| Cow position: | chr16:49101410-49101570 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 159-328 |
| Cow position: | chr16:27163073-27163242 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-329 |
| Cow position: | chr16:17955050-17955218 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 161-322 |
| Cow position: | chr16:52807546-52807699 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 165-322 |
| Cow position: | chr16:27156067-27155913 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 159-323 |
| Cow position: | chr17:866568-866404 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-324 |
| Cow position: | chr17:10449780-10449945 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-329 |
| Cow position: | chr17:34262739-34262909 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 160-322 |
| Cow position: | chr17:1257945-1258106 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 36 |
| Conread position: | 164-329 |
| Cow position: | chr17:16954272-16954108 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 162, 0 |
| Conread position: | 140-327 |
| Cow position: | chr18:13727133-13726946 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 41 |
| Conread position: | 161-302 |
| Cow position: | chr18:24131804-24131943 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 12, 28 |
| Conread position: | 159-329 |
| Cow position: | chr19:12791320-12791156 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 159-324 |
| Cow position: | chr2:4212644-4212483 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 160-328 |
| Cow position: | chr2:2401522-2401690 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 161-329 |
| Cow position: | chr2:21628212-21628378 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 164-302 |
| Cow position: | chr2:12145391-12145528 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 158-324 |
| Cow position: | chr20:28893716-28893545 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 160-327 |
| Cow position: | chr21:22516469-22516304 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 185-328 |
| Cow position: | chr21:27785788-27785646 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 159-328 |
| Cow position: | chr22:30871922-30871753 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 30 |
| Conread position: | 159-328 |
| Cow position: | chr22:31309215-31309387 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 159-328 |
| Cow position: | chr22:35229255-35229422 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 61, 133 |
| Conread position: | 161-324 |
| Cow position: | chr22:31431879-31431718 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 164-328 |
| Cow position: | chr22:31904252-31904416 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 133, 24 |
| Conread position: | 174-328 |
| Cow position: | chr22:24759068-24759223 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 28, 65 |
| Conread position: | 159-328 |
| Cow position: | chr23:27156596-27156765 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-328 |
| Cow position: | chr24:13859242-13859411 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 161-327 |
| Cow position: | chr24:5308731-5308897 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 72, 142 |
| Conread position: | 165-329 |
| Cow position: | chr24:6178599-6178438 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 159-328 |
| Cow position: | chr25:6447504-6447682 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 161-329 |
| Cow position: | chr25:41245892-41246061 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 164-324 |
| Cow position: | chr25:23990828-23990986 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 164-328 |
| Cow position: | chr25:18914595-18914430 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 77, 67 |
| Conread position: | 166-328 |
| Cow position: | chr25:26942235-26942074 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 135, 0 |
| Conread position: | 168-323 |
| Cow position: | chr25:18080718-18080566 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 204-328 |
| Cow position: | chr25:6258463-6258587 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 95 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-324 |
| Cow position: | chr26:6567495-6567336 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 89, 24 |
| Conread position: | 167-328 |
| Cow position: | chr26:5307831-5307672 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 119, 0 |
| Conread position: | 159-296 |
| Cow position: | chr27:14907532-14907669 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-328 |
| Cow position: | chr27:18665525-18665355 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 25 |
| Conread position: | 161-324 |
| Cow position: | chr27:17726154-17726314 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 161-328 |
| Cow position: | chr27:692896-693062 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 174-328 |
| Cow position: | chr27:11025748-11025901 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 159-328 |
| Cow position: | chr28:9294286-9294116 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 142-328 |
| Cow position: | chr29:35999891-35999695 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 21 |
| Conread position: | 159-323 |
| Cow position: | chr29:11085336-11085173 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 159-324 |
| Cow position: | chr29:6542904-6542740 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 159-327 |
| Cow position: | chr29:41786990-41787159 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 165, 0 |
| Conread position: | 185-329 |
| Cow position: | chr29:14844387-14844528 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 136, 52 |
| Conread position: | 159-305 |
| Cow position: | chr3:36133335-36133189 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-328 |
| Cow position: | chr3:13030753-13030922 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 22, 74 |
| Conread position: | 159-328 |
| Cow position: | chr3:39402704-39402535 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-328 |
| Cow position: | chr3:42692304-42692471 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 159-328 |
| Cow position: | chr3:59329581-59329751 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 13, 36 |
| Conread position: | 160-303 |
| Cow position: | chr3:28726386-28726245 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 161-322 |
| Cow position: | chr3:32699421-32699578 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 161-328 |
| Cow position: | chr3:6674666-6674494 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 183-329 |
| Cow position: | chr3:11247441-11247295 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 66, 71 |
| Conread position: | 185-304 |
| Cow position: | chr3:36784063-36783944 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 204-324 |
| Cow position: | chr3:48868333-48868452 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 159-321 |
| Cow position: | chr4:30968818-30968656 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-328 |
| Cow position: | chr4:11663202-11663366 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 14, 40 |
| Conread position: | 161-290 |
| Cow position: | chr4:17645508-17645379 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 165-328 |
| Cow position: | chr4:6272549-6272386 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 170-329 |
| Cow position: | chr4:45281790-45281947 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 185-328 |
| Cow position: | chr4:3875108-3874965 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 142-328 |
| Cow position: | chr5:13301941-13302129 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 30, 5 |
| Conread position: | 159-304 |
| Cow position: | chr5:46815441-46815589 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 159-320 |
| Cow position: | chr5:48121734-48121574 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 119 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 159-328 |
| Cow position: | chr5:18028453-18028279 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 159-329 |
| Cow position: | chr5:31468089-31468255 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 183-328 |
| Cow position: | chr5:55812055-55812200 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 107 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-328 |
| Cow position: | chr5:56265615-56265474 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 186-324 |
| Cow position: | chr5:59042962-59043097 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 186-324 |
| Cow position: | chr5:59096895-59097030 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 190-329 |
| Cow position: | chr5:66260162-66260300 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 159-319 |
| Cow position: | chr6:44638494-44638652 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 154, 132 |
| Conread position: | 162-328 |
| Cow position: | chr6:32977483-32977640 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 207-328 |
| Cow position: | chr6:45664316-45664437 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 678-794 |
| Cow position: | chr6:3082566-3082687 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 159-323 |
| Cow position: | chr7:49430211-49430045 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 159-324 |
| Cow position: | chr7:53092754-53092588 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 22, 18 |
| Conread position: | 159-328 |
| Cow position: | chr7:43881580-43881403 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 159-328 |
| Cow position: | chr7:52326734-52326566 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 15, 73 |
| Conread position: | 165-328 |
| Cow position: | chr7:52391348-52391181 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 138, 36 |
| Conread position: | 146-324 |
| Cow position: | chr8:22221794-22221617 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 159-324 |
| Cow position: | chr8:51430763-51430928 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 20 |
| Conread position: | 160-324 |
| Cow position: | chr8:8050053-8049893 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 164-328 |
| Cow position: | chr8:44480623-44480458 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 12, 99 |
| Conread position: | 169-328 |
| Cow position: | chr8:19806996-19806839 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 185-321 |
| Cow position: | chr8:26491743-26491879 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-328 |
| Cow position: | chr9:18829930-18829761 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 160-325 |
| Cow position: | chr9:35007584-35007418 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 130, 0 |
| Conread position: | 161-328 |
| Cow position: | chr9:42749287-42749453 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 164-321 |
| Cow position: | chr9:34208703-34208859 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 100-329 |
| Cow position: | chrX:36876743-36876505 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 159-284 |
| Cow position: | chrX:19118402-19118277 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 159-304 |
| Cow position: | chrX:35065051-35065196 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 139, 39 |
| Conread position: | 159-304 |
| Cow position: | chrX:40313521-40313664 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 0 |
| Conread position: | 159-328 |
| Cow position: | chrX:19686184-19686016 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 159-328 |
| Cow position: | chrX:36926927-36927098 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 159-328 |
| Cow position: | chrX:37576961-37576793 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 159-328 |
| Cow position: | chrX:45749027-45748857 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 159-329 |
| Cow position: | chrX:4446391-4446220 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 22, 92 |
| Conread position: | 159-329 |
| Cow position: | chrX:6816303-6816472 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 159-329 |
| Cow position: | chrX:11560333-11560501 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 160-322 |
| Cow position: | chrX:42455415-42455577 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 174-323 |
| Cow position: | chrX:4271427-4271279 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 186-328 |
| Cow position: | chrX:4273941-4274078 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 45, 0 |