Cow genome map
| Conread name: | Utr1-UTR010012E09 |
| Conread position: | 175-315 |
| Cow position: | chr10:64963288-64963432 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 26, 54 |
| Conread position: | 175-337 |
| Cow position: | chr10:58655442-58655279 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 185-338 |
| Cow position: | chr11:27639255-27639409 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 30, 41 |
| Conread position: | 171-342 |
| Cow position: | chr12:6467049-6466875 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 40 |
| Conread position: | 175-349 |
| Cow position: | chr12:3178648-3178824 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 172-365 |
| Cow position: | chr14:35403935-35404130 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 57 |
| Conread position: | 472-635 |
| Cow position: | chr14:9243248-9243414 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 131 |
| Conread position: | 172-344 |
| Cow position: | chr16:44776217-44776396 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 43, 18 |
| Conread position: | 175-317 |
| Cow position: | chr16:46535203-46535348 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 40, 56 |
| Conread position: | 175-342 |
| Cow position: | chr16:27160555-27160387 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 40, 19 |
| Conread position: | 183-336 |
| Cow position: | chr16:29771617-29771775 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 45 |
| Conread position: | 172-342 |
| Cow position: | chr19:44191814-44191985 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 43, 156 |
| Conread position: | 173-322 |
| Cow position: | chr19:45598003-45597857 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 36, 68 |
| Conread position: | 175-338 |
| Cow position: | chr2:79963884-79964047 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 40, 94 |
| Conread position: | 374-611 |
| Cow position: | chr2:34751153-34751391 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 19, 87 |
| Conread position: | 173-345 |
| Cow position: | chr20:3161901-3162066 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 13 |
| Conread position: | 175-344 |
| Cow position: | chr20:4001048-4001222 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 30, 56 |
| Conread position: | 175-345 |
| Cow position: | chr21:38928367-38928533 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 176-344 |
| Cow position: | chr21:37988058-37987886 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 39, 52 |
| Conread position: | 175-300 |
| Cow position: | chr22:27150005-27150133 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 175-352 |
| Cow position: | chr22:41338070-41337888 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 38, 52 |
| Conread position: | 348-807 |
| Cow position: | chr22:41309049-41308588 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 214, 245 |
| Conread position: | 389-585 |
| Cow position: | chr22:33616207-33616395 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 175-298 |
| Cow position: | chr23:9515056-9515181 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 71 |
| Conread position: | 175-344 |
| Cow position: | chr23:9617968-9617796 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 175-344 |
| Cow position: | chr23:26598610-26598785 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 34, 51 |
| Conread position: | 174-345 |
| Cow position: | chr24:13307285-13307105 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 175-337 |
| Cow position: | chr24:16627494-16627654 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 49 |
| Conread position: | 175-344 |
| Cow position: | chr24:38024152-38023981 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 39, 114 |
| Conread position: | 177-344 |
| Cow position: | chr24:2128492-2128661 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 38, 51 |
| Conread position: | 178-338 |
| Cow position: | chr24:37151386-37151549 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 35, 49 |
| Conread position: | 167-335 |
| Cow position: | chr25:33008196-33008026 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 7, 62 |
| Conread position: | 175-299 |
| Cow position: | chr25:33731647-33731773 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 175-349 |
| Cow position: | chr25:35172363-35172196 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 40, 74 |
| Conread position: | 175-344 |
| Cow position: | chr26:26975671-26975843 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 177-344 |
| Cow position: | chr26:22774661-22774488 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 18, 49 |
| Conread position: | 188-344 |
| Cow position: | chr28:776107-776260 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 27, 94 |
| Conread position: | 175-322 |
| Cow position: | chr29:34602407-34602557 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 40, 53 |
| Conread position: | 224-344 |
| Cow position: | chr29:40462172-40462050 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 177-344 |
| Cow position: | chr3:65297050-65297210 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 25 |
| Conread position: | 175-337 |
| Cow position: | chr4:361520-361685 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 40, 7 |
| Conread position: | 175-344 |
| Cow position: | chr4:44411651-44411823 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 140 |
| Conread position: | 185-349 |
| Cow position: | chr4:65354999-65354831 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 33, 137 |
| Conread position: | 175-331 |
| Cow position: | chr5:34500887-34501041 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 38, 15 |
| Conread position: | 175-338 |
| Cow position: | chr5:6968367-6968538 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 177-344 |
| Cow position: | chr5:9175372-9175543 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 188-338 |
| Cow position: | chr5:51775148-51775299 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 27, 137 |
| Conread position: | 175-344 |
| Cow position: | chr6:27488369-27488199 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 84 |
| Conread position: | 175-344 |
| Cow position: | chr6:42716716-42716543 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 175-344 |
| Cow position: | chr6:65687066-65686892 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 120 |
| Conread position: | 177-344 |
| Cow position: | chr6:35399750-35399914 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 175-344 |
| Cow position: | chr7:32471024-32470855 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 40, 86 |
| Conread position: | 175-349 |
| Cow position: | chr8:13749598-13749423 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 38, 48 |
| Conread position: | 175-334 |
| Cow position: | chr9:39181174-39181336 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 52 |
| Conread position: | 351-617 |
| Cow position: | chr9:48053227-48053487 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 37, 101 |