Cow genome map
| Conread name: | Utr1-UTR010044E01 | 
| Conread position: | 205-753 | 
| Cow position: | chr1:82425103-82424543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 353 | 
| Conread position: | 209-808 | 
| Cow position: | chr1:25098938-25098310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 158 | 
| Conread position: | 215-812 | 
| Cow position: | chr1:78696625-78696028 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 162 | 
| Conread position: | 216-808 | 
| Cow position: | chr1:85698743-85699341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 614 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 34 | 
| Conread position: | 219-813 | 
| Cow position: | chr1:59275728-59276329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 95 | 
| Conread position: | 232-791 | 
| Cow position: | chr1:7502389-7502950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 56 | 
| Conread position: | 243-818 | 
| Cow position: | chr1:34006196-34006771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 94 | 
| Conread position: | 260-808 | 
| Cow position: | chr1:62266837-62267385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 132 | 
| Conread position: | 262-820 | 
| Cow position: | chr1:2292068-2291511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 41, 63 | 
| Conread position: | 550-808 | 
| Cow position: | chr1:23476711-23476975 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 36 | 
| Conread position: | 208-821 | 
| Cow position: | chr10:42233848-42233238 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 31 | 
| Conread position: | 214-809 | 
| Cow position: | chr10:848988-849578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 29 | 
| Conread position: | 239-795 | 
| Cow position: | chr10:41216039-41215465 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 158 | 
| Conread position: | 211-798 | 
| Cow position: | chr11:53093618-53094193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 14 | 
| Conread position: | 296-721 | 
| Cow position: | chr11:37430378-37430792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 33, 78 | 
| Conread position: | 209-811 | 
| Cow position: | chr12:31094969-31095563 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 124 | 
| Conread position: | 219-739 | 
| Cow position: | chr12:42961531-42962059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 36 | 
| Conread position: | 386-798 | 
| Cow position: | chr12:21083731-21084158 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 9 | 
| Conread position: | 544-807 | 
| Cow position: | chr12:4179037-4179307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 271 | 
| Alignm identity: | 204 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 0 | 
| Conread position: | 648-798 | 
| Cow position: | chr12:30587594-30587749 (view UCSC Genome Browser custom track) | 
| Alignm length: | 156 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 17, 0 | 
| Conread position: | 214-798 | 
| Cow position: | chr13:40140033-40140618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 25 | 
| Conread position: | 216-798 | 
| Cow position: | chr13:12487465-12488041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 43 | 
| Conread position: | 216-807 | 
| Cow position: | chr13:15491077-15490515 (view UCSC Genome Browser custom track) | 
| Alignm length: | 608 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 175 | 
| Conread position: | 209-683 | 
| Cow position: | chr14:14242509-14242962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 406, 94 | 
| Conread position: | 214-545 | 
| Cow position: | chr14:15778936-15778620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 153, 28 | 
| Conread position: | 216-783 | 
| Cow position: | chr14:18290616-18291183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 586 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 237, 116 | 
| Conread position: | 223-783 | 
| Cow position: | chr14:32734957-32734411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 126 | 
| Conread position: | 568-808 | 
| Cow position: | chr14:17782515-17782268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 250 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 187 | 
| Conread position: | 699-809 | 
| Cow position: | chr14:14243207-14243316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 101, 0 | 
| Conread position: | 235-808 | 
| Cow position: | chr15:42413745-42413165 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 68 | 
| Conread position: | 243-677 | 
| Cow position: | chr15:43913149-43912703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 71 | 
| Conread position: | 188-553 | 
| Cow position: | chr16:52843073-52842704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 373 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 16 | 
| Conread position: | 214-818 | 
| Cow position: | chr16:15231654-15231042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 175 | 
| Conread position: | 216-520 | 
| Cow position: | chr16:52806808-52807119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 2e-33 | 
| Alignm gaps (pig, cow): | 101, 287 | 
| Conread position: | 248-637 | 
| Cow position: | chr16:19732226-19732621 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 29 | 
| Conread position: | 535-809 | 
| Cow position: | chr16:52842380-52842102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 79 | 
| Conread position: | 209-532 | 
| Cow position: | chr17:16174836-16174504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 129, 56 | 
| Conread position: | 232-791 | 
| Cow position: | chr17:8095526-8096060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 45 | 
| Conread position: | 239-529 | 
| Cow position: | chr17:30490849-30490556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 300 | 
| Alignm identity: | 215 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 82, 138 | 
| Conread position: | 204-481 | 
| Cow position: | chr2:74825534-74825253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 67, 58 | 
| Conread position: | 215-742 | 
| Cow position: | chr2:26290481-26289938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 63 | 
| Conread position: | 215-787 | 
| Cow position: | chr2:7208305-7207721 (view UCSC Genome Browser custom track) | 
| Alignm length: | 588 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 24 | 
| Conread position: | 235-645 | 
| Cow position: | chr2:38125466-38125060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 420 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 92, 155 | 
| Conread position: | 236-420 | 
| Cow position: | chr2:65892941-65892758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 190 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 101, 143 | 
| Conread position: | 274-807 | 
| Cow position: | chr2:51844148-51843613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 67 | 
| Conread position: | 280-776 | 
| Cow position: | chr2:79932536-79932053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 506 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 103 | 
| Conread position: | 389-808 | 
| Cow position: | chr2:76938438-76938852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 92 | 
| Conread position: | 464-807 | 
| Cow position: | chr2:16404620-16404273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 357 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 7.9874e-44 | 
| Alignm gaps (pig, cow): | 10, 47 | 
| Conread position: | 554-798 | 
| Cow position: | chr2:39329952-39329697 (view UCSC Genome Browser custom track) | 
| Alignm length: | 258 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 22, 79 | 
| Conread position: | 269-818 | 
| Cow position: | chr20:8086256-8085710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 38 | 
| Conread position: | 11-807 | 
| Cow position: | chr21:720088-720893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 824 | 
| Alignm identity: | 602 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 277 | 
| Conread position: | 213-807 | 
| Cow position: | chr21:4944306-4944891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 90 | 
| Conread position: | 214-758 | 
| Cow position: | chr21:38742141-38741607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 283, 110 | 
| Conread position: | 222-807 | 
| Cow position: | chr21:221722-221157 (view UCSC Genome Browser custom track) | 
| Alignm length: | 595 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 55 | 
| Conread position: | 247-808 | 
| Cow position: | chr21:2053724-2054298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 144 | 
| Conread position: | 264-811 | 
| Cow position: | chr21:33579020-33579567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 50 | 
| Conread position: | 307-558 | 
| Cow position: | chr21:9576825-9577078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 259 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 28, 80 | 
| Conread position: | 389-785 | 
| Cow position: | chr21:37334829-37334439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 402 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 228 | 
| Conread position: | 412-798 | 
| Cow position: | chr21:6399290-6398904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 201 | 
| Conread position: | 595-811 | 
| Cow position: | chr21:9577079-9577298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 179 | 
| Alignm E-value: | 1e-39 | 
| Alignm gaps (pig, cow): | 21, 136 | 
| Conread position: | 205-607 | 
| Cow position: | chr22:27023440-27023839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 407 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 167 | 
| Conread position: | 209-808 | 
| Cow position: | chr22:18733820-18734411 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 50 | 
| Conread position: | 214-785 | 
| Cow position: | chr22:44748294-44748852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 591 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 112, 40 | 
| Conread position: | 219-807 | 
| Cow position: | chr22:26520761-26520172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 608 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 172 | 
| Conread position: | 248-808 | 
| Cow position: | chr22:17148701-17149284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 590 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 229 | 
| Conread position: | 389-778 | 
| Cow position: | chr23:40557770-40558148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 167 | 
| Conread position: | 214-821 | 
| Cow position: | chr24:44441240-44441856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 145 | 
| Conread position: | 392-808 | 
| Cow position: | chr24:44571760-44572168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 181 | 
| Conread position: | 665-808 | 
| Cow position: | chr24:7848575-7848720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 127 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 23, 0 | 
| Conread position: | 219-798 | 
| Cow position: | chr25:24208106-24208663 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 26 | 
| Conread position: | 389-818 | 
| Cow position: | chr25:28673782-28674225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 423 | 
| Conread position: | 525-811 | 
| Cow position: | chr25:11445447-11445155 (view UCSC Genome Browser custom track) | 
| Alignm length: | 297 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 43 | 
| Conread position: | 209-808 | 
| Cow position: | chr27:9722184-9722794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 614 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 161 | 
| Conread position: | 635-807 | 
| Cow position: | chr27:1106681-1106850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 178 | 
| Alignm identity: | 139 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 30, 115 | 
| Conread position: | 388-798 | 
| Cow position: | chr28:14998594-14998977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 56 | 
| Conread position: | 439-810 | 
| Cow position: | chr28:25190771-25190386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 136 | 
| Conread position: | 611-798 | 
| Cow position: | chr29:24409141-24409329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 189 | 
| Alignm identity: | 114 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 72, 0 | 
| Conread position: | 215-814 | 
| Cow position: | chr3:3180067-3180671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 615 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 176 | 
| Conread position: | 269-787 | 
| Cow position: | chr3:54900899-54900364 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 125 | 
| Conread position: | 281-807 | 
| Cow position: | chr3:18920231-18920764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 30 | 
| Conread position: | 665-808 | 
| Cow position: | chr3:59809122-59808977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 146 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 153-810 | 
| Cow position: | chr4:31110813-31111453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 463 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 23 | 
| Conread position: | 209-748 | 
| Cow position: | chr4:32227391-32227934 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 107, 172 | 
| Conread position: | 214-456 | 
| Cow position: | chr4:62672857-62673101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 248 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 115, 84 | 
| Conread position: | 234-798 | 
| Cow position: | chr4:50220043-50219496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 239, 69 | 
| Conread position: | 234-807 | 
| Cow position: | chr4:21275065-21274476 (view UCSC Genome Browser custom track) | 
| Alignm length: | 597 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 77 | 
| Conread position: | 340-821 | 
| Cow position: | chr4:23826675-23827145 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 44 | 
| Conread position: | 544-798 | 
| Cow position: | chr4:15850904-15850645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 203 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 33, 23 | 
| Conread position: | 623-808 | 
| Cow position: | chr4:44814037-44813845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 193 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 9e-36 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 209-616 | 
| Cow position: | chr5:14662749-14663148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 182 | 
| Conread position: | 216-532 | 
| Cow position: | chr5:14788096-14788417 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 107, 173 | 
| Conread position: | 217-495 | 
| Cow position: | chr5:22447607-22447327 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 114, 60 | 
| Conread position: | 496-807 | 
| Cow position: | chr5:34975951-34975642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 7.00649e-44 | 
| Alignm gaps (pig, cow): | 192, 132 | 
| Conread position: | 568-798 | 
| Cow position: | chr5:22446961-22446727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 237 | 
| Alignm identity: | 180 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 43, 115 | 
| Conread position: | 221-807 | 
| Cow position: | chr6:13458795-13458224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 598 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 399, 74 | 
| Conread position: | 204-808 | 
| Cow position: | chr7:44948341-44947736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 88 | 
| Conread position: | 243-691 | 
| Cow position: | chr7:23083855-23084294 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 22 | 
| Conread position: | 259-808 | 
| Cow position: | chr7:43910052-43909498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 130 | 
| Conread position: | 277-814 | 
| Cow position: | chr7:41436420-41436952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 114 | 
| Conread position: | 619-818 | 
| Cow position: | chr7:63726969-63727166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 206 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 47, 124 | 
| Conread position: | 214-540 | 
| Cow position: | chr8:28085511-28085837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 335 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-33 | 
| Alignm gaps (pig, cow): | 7, 31 | 
| Conread position: | 230-471 | 
| Cow position: | chr8:13942879-13942639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 245 | 
| Alignm identity: | 162 | 
| Alignm E-value: | 6e-23 | 
| Alignm gaps (pig, cow): | 102, 84 | 
| Conread position: | 303-808 | 
| Cow position: | chr8:48527129-48526646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 71 | 
| Conread position: | 486-798 | 
| Cow position: | chr8:36221860-36222179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 227 | 
| Conread position: | 209-737 | 
| Cow position: | chr9:9353522-9354086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 7.00649e-45 | 
| Alignm gaps (pig, cow): | 101, 30 | 
| Conread position: | 222-808 | 
| Cow position: | chr9:29256834-29256251 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 44, 85 | 
| Conread position: | 278-540 | 
| Cow position: | chr9:52924921-52924667 (view UCSC Genome Browser custom track) | 
| Alignm length: | 268 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 50, 25 | 
| Conread position: | 397-809 | 
| Cow position: | chr9:61421237-61421646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 79, 38 | 
| Conread position: | 204-751 | 
| Cow position: | chrX:43763467-43762917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 40 | 
| Conread position: | 216-512 | 
| Cow position: | chrX:11677792-11678092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 206 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 116, 6 | 
| Conread position: | 219-814 | 
| Cow position: | chrX:36804626-36804029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 84 | 
| Conread position: | 274-685 | 
| Cow position: | chrX:31216166-31215764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 423 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 121 | 
