Cow genome map
| Conread name: | Utr1-UTR010064C01 |
| Conread position: | 412-778 |
| Cow position: | chr1:76254782-76254422 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 414-781 |
| Cow position: | chr1:72158112-72158474 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 458-779 |
| Cow position: | chr1:60822315-60822624 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 406-661 |
| Cow position: | chr10:22740103-22740355 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 27 |
| Conread position: | 533-778 |
| Cow position: | chr10:27289800-27290045 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 421-782 |
| Cow position: | chr11:78298279-78298632 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 278 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 97 |
| Conread position: | 533-775 |
| Cow position: | chr11:68999252-68999487 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 186 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 234, 169 |
| Conread position: | 534-676 |
| Cow position: | chr11:31447283-31447425 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 612-779 |
| Cow position: | chr11:35219310-35219481 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 442-779 |
| Cow position: | chr12:2955425-2955761 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 83 |
| Conread position: | 277-746 |
| Cow position: | chr13:59903191-59902710 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 35 |
| Conread position: | 414-763 |
| Cow position: | chr13:25956849-25957174 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 412-760 |
| Cow position: | chr15:15051807-15052151 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 274 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 442-778 |
| Cow position: | chr15:23458995-23458664 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 533-773 |
| Cow position: | chr15:23806134-23805901 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 0 |
| Conread position: | 534-779 |
| Cow position: | chr16:2455915-2456157 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 525-779 |
| Cow position: | chr17:27703452-27703198 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 205 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 460-779 |
| Cow position: | chr18:38987520-38987212 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 534-783 |
| Cow position: | chr18:45583344-45583593 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 351-775 |
| Cow position: | chr19:29683709-29684137 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 176 |
| Conread position: | 412-548 |
| Cow position: | chr19:10101190-10101057 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 105 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 412-784 |
| Cow position: | chr19:8517832-8518202 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 140 |
| Conread position: | 412-785 |
| Cow position: | chr19:13447326-13446957 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 106 |
| Conread position: | 615-775 |
| Cow position: | chr19:10101055-10100898 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 135 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 412-783 |
| Cow position: | chr2:50609830-50610197 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 305 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 414-775 |
| Cow position: | chr2:61152242-61152587 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 415-779 |
| Cow position: | chr2:19056131-19056502 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 36 |
| Conread position: | 443-785 |
| Cow position: | chr2:67612108-67611768 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 75 |
| Conread position: | 536-759 |
| Cow position: | chr2:43730127-43730336 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 412-780 |
| Cow position: | chr21:22836981-22836623 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 534-779 |
| Cow position: | chr23:13842675-13842430 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-770 |
| Cow position: | chr24:2664653-2664319 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 412-779 |
| Cow position: | chr24:28022999-28022632 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 297 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 344, 105 |
| Conread position: | 482-779 |
| Cow position: | chr24:27083064-27083355 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 437-734 |
| Cow position: | chr26:13267600-13267891 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 412-778 |
| Cow position: | chr27:22541109-22541469 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 419-779 |
| Cow position: | chr27:24299301-24299654 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 534-775 |
| Cow position: | chr28:8130441-8130209 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 537-734 |
| Cow position: | chr29:8900957-8901147 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 412-779 |
| Cow position: | chr3:18613357-18613724 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 110 |
| Conread position: | 418-783 |
| Cow position: | chr3:31406433-31406071 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 38 |
| Conread position: | 579-756 |
| Cow position: | chr4:57232499-57232322 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 154 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 534-768 |
| Cow position: | chr5:57100622-57100387 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 0 |
| Conread position: | 599-728 |
| Cow position: | chr5:57101059-57100929 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 412-783 |
| Cow position: | chr6:41927700-41927345 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 271 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 23 |
| Conread position: | 412-785 |
| Cow position: | chr6:54518040-54518410 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 288, 106 |
| Conread position: | 412-783 |
| Cow position: | chr7:10794679-10795042 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 413-779 |
| Cow position: | chr7:68498866-68498513 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 54 |
| Conread position: | 461-778 |
| Cow position: | chr7:14275616-14275296 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 6 |
| Conread position: | 412-618 |
| Cow position: | chr8:32009586-32009786 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 160 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 422-779 |
| Cow position: | chr8:18941713-18942065 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 650-783 |
| Cow position: | chr8:32010607-32010740 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-781 |
| Cow position: | chr9:48554329-48553960 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 65 |
| Conread position: | 477-649 |
| Cow position: | chr9:53317189-53317020 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 534-779 |
| Cow position: | chr9:35097234-35097479 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 412-697 |
| Cow position: | chrX:14321820-14321537 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 534-779 |
| Cow position: | chrX:21812064-21812309 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |