Cow genome map
| Conread name: | mH0-MI-P-HO-aft-h-09-1-UM.s1 |
| Conread position: | 12-237 |
| Cow position: | chr1:8907190-8906980 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 216, 17 |
| Conread position: | 16-274 |
| Cow position: | chr1:160749-160994 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 227, 12 |
| Conread position: | 271-403 |
| Cow position: | chr1:8906742-8906616 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 107 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 300-406 |
| Cow position: | chr1:161236-161343 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 339-418 |
| Cow position: | chr1:47480032-47479955 (view UCSC Genome Browser custom track) |
| Alignm length: | 80 |
| Alignm identity: | 75 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 21-341 |
| Cow position: | chr10:14622897-14622577 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 198, 274 |
| Conread position: | 256-417 |
| Cow position: | chr10:40314915-40314758 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 151 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 17-403 |
| Cow position: | chr11:67284355-67283971 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 252, 11 |
| Conread position: | 78-412 |
| Cow position: | chr11:19728267-19728604 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 122-334 |
| Cow position: | chr12:30842624-30842835 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 178, 0 |
| Conread position: | 12-406 |
| Cow position: | chr15:2109198-2109591 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 16 |
| Conread position: | 12-250 |
| Cow position: | chr19:15558806-15559026 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 67-418 |
| Cow position: | chr19:42922990-42922638 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 165, 111 |
| Conread position: | 12-418 |
| Cow position: | chr2:1241731-1242130 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 16 |
| Conread position: | 12-314 |
| Cow position: | chr22:35737263-35737564 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 127-404 |
| Cow position: | chr22:45621442-45621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 184 |
| Conread position: | 282-403 |
| Cow position: | chr22:35737557-35737675 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 118 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 169-405 |
| Cow position: | chr23:5423183-5422949 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 115-409 |
| Cow position: | chr24:15448904-15448614 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 186-415 |
| Cow position: | chr24:32145170-32145397 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 215 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 115 |
| Conread position: | 16-407 |
| Cow position: | chr27:30549925-30550303 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 271, 12 |
| Conread position: | 17-409 |
| Cow position: | chr27:14706735-14706354 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 11 |
| Conread position: | 279-390 |
| Cow position: | chr28:13881686-13881575 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 93 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 12-403 |
| Cow position: | chr3:17723180-17723568 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 16 |
| Conread position: | 13-331 |
| Cow position: | chr3:54640504-54640192 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 91, 15 |
| Conread position: | 14-337 |
| Cow position: | chr3:2885959-2886299 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 283 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 175, 14 |
| Conread position: | 118-381 |
| Cow position: | chr4:46919301-46919553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 11-408 |
| Cow position: | chr5:61090899-61090503 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 17 |
| Conread position: | 12-408 |
| Cow position: | chr5:62310994-62311377 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 12-415 |
| Cow position: | chr5:2002834-2003197 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 16 |
| Conread position: | 258-417 |
| Cow position: | chr6:55004366-55004211 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 140 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 12-403 |
| Cow position: | chr7:63142645-63142257 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 16 |
| Conread position: | 12-417 |
| Cow position: | chr7:65486598-65486195 (view UCSC Genome Browser custom track) |
| Alignm length: | 412 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 16 |
| Conread position: | 12-418 |
| Cow position: | chr9:24247464-24247058 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 390 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 257, 16 |