Cow genome map
| Conread name: | recc2818c_g16.y1 | 
| Conread position: | 12-557 | 
| Cow position: | chr10:8996546-8996001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 240, 253 | 
| Conread position: | 13-412 | 
| Cow position: | chr10:21939028-21938633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 401 | 
| Alignm identity: | 246 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 256, 12 | 
| Conread position: | 14-667 | 
| Cow position: | chr10:8996712-8996059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 159 | 
| Conread position: | 21-508 | 
| Cow position: | chr10:9010349-9009862 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 9.99995e-41 | 
| Alignm gaps (pig, cow): | 86, 66 | 
| Conread position: | 26-297 | 
| Cow position: | chr10:9031393-9031664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 2e-32 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-381 | 
| Cow position: | chr10:9031310-9031664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 132, 140 | 
| Conread position: | 27-639 | 
| Cow position: | chr10:8996615-8996003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 148 | 
| Conread position: | 27-667 | 
| Cow position: | chr10:8996783-8996143 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 419, 400 | 
| Conread position: | 27-667 | 
| Cow position: | chr10:9010511-9009871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 80 | 
| Conread position: | 29-465 | 
| Cow position: | chr10:9031228-9031664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 39-582 | 
| Cow position: | chr10:21939171-21938631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 547 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 136, 149 | 
| Conread position: | 45-667 | 
| Cow position: | chr10:8996933-8996311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 54 | 
| Conread position: | 135-549 | 
| Cow position: | chr10:9031250-9031664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 419 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 206, 211 | 
| Conread position: | 201-633 | 
| Cow position: | chr10:9031232-9031664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 44 | 
| Conread position: | 235-666 | 
| Cow position: | chr10:9031182-9031613 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 96 | 
| Conread position: | 291-667 | 
| Cow position: | chr10:21939171-21938795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 49, 59 | 
| Conread position: | 294-667 | 
| Cow position: | chr10:9010580-9010207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 7e-36 | 
| Alignm gaps (pig, cow): | 39, 54 | 
| Conread position: | 13-667 | 
| Cow position: | chr11:74554888-74554234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 81 | 
| Conread position: | 27-558 | 
| Cow position: | chr11:74554706-74554175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 148 | 
| Conread position: | 27-638 | 
| Cow position: | chr11:74554790-74554179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 615 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 155 | 
| Conread position: | 27-667 | 
| Cow position: | chr11:74554958-74554318 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 140 | 
| Conread position: | 27-667 | 
| Cow position: | chr11:74555042-74554402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 404, 415 | 
| Conread position: | 109-667 | 
| Cow position: | chr11:74555044-74554486 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 493, 486 | 
| Conread position: | 135-667 | 
| Cow position: | chr11:74555102-74554570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 206, 211 | 
| Conread position: | 214-667 | 
| Cow position: | chr11:74555107-74554654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 127, 132 | 
| Conread position: | 1-548 | 
| Cow position: | chr13:39984356-39984903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 92 | 
| Conread position: | 1-667 | 
| Cow position: | chr13:39984020-39984686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 93 | 
| Conread position: | 8-666 | 
| Cow position: | chr13:56292654-56292001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 670 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 85, 106 | 
| Conread position: | 9-556 | 
| Cow position: | chr13:56292311-56291772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 461, 113 | 
| Conread position: | 12-525 | 
| Cow position: | chr13:56317310-56317815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 517 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 98, 85 | 
| Conread position: | 12-645 | 
| Cow position: | chr13:56333679-56334321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 77 | 
| Conread position: | 13-662 | 
| Cow position: | chr13:56333512-56334170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 333 | 
| Conread position: | 17-667 | 
| Cow position: | chr13:39983868-39984518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 78 | 
| Conread position: | 26-346 | 
| Cow position: | chr13:56317929-56318249 (view UCSC Genome Browser custom track) | 
| Alignm length: | 324 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 63, 78 | 
| Conread position: | 26-632 | 
| Cow position: | chr13:39984297-39984903 (view UCSC Genome Browser custom track) | 
| Alignm length: | 608 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 413, 403 | 
| Conread position: | 26-667 | 
| Cow position: | chr13:39984213-39984854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 68 | 
| Conread position: | 26-667 | 
| Cow position: | chr13:56333609-56334259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 86 | 
| Conread position: | 27-561 | 
| Cow position: | chr13:56333778-56334321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 272, 327 | 
| Conread position: | 28-509 | 
| Cow position: | chr13:56317852-56318334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 79, 59 | 
| Conread position: | 38-653 | 
| Cow position: | chr13:39983973-39984588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 74 | 
| Conread position: | 135-667 | 
| Cow position: | chr13:39983818-39984350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 40, 45 | 
| Conread position: | 155-643 | 
| Cow position: | chr13:56333570-56334058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 109 | 
| Conread position: | 156-667 | 
| Cow position: | chr13:56292332-56291831 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 89 | 
| Conread position: | 166-586 | 
| Cow position: | chr13:56317296-56317707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 42, 64 | 
| Conread position: | 195-663 | 
| Cow position: | chr13:56333526-56333994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 57, 70 | 
| Conread position: | 359-667 | 
| Cow position: | chr13:56317847-56318150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 55, 0 | 
| Conread position: | 363-667 | 
| Cow position: | chr13:56333526-56333830 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 72, 64 | 
| Conread position: | 1-667 | 
| Cow position: | chr14:25836002-25836668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-667 | 
| Cow position: | chr14:25859979-25860645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 15 | 
| Conread position: | 1-667 | 
| Cow position: | chr14:25877030-25877696 (view UCSC Genome Browser custom track) | 
| Alignm length: | 670 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 17 | 
| Conread position: | 3-326 | 
| Cow position: | chr14:25794469-25794147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 327 | 
| Alignm identity: | 216 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 12, 25 | 
| Conread position: | 3-667 | 
| Cow position: | chr14:25795393-25794729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 164 | 
| Conread position: | 8-338 | 
| Cow position: | chr14:3127639-3127310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 163, 15 | 
| Conread position: | 9-637 | 
| Cow position: | chr14:25860155-25860783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 17 | 
| Conread position: | 9-653 | 
| Cow position: | chr14:25877206-25877850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 17 | 
| Conread position: | 9-667 | 
| Cow position: | chr14:25876702-25877360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 13 | 
| Conread position: | 11-507 | 
| Cow position: | chr14:25784235-25784729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 5 | 
| Conread position: | 11-665 | 
| Cow position: | chr14:25876536-25877190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 17 | 
| Conread position: | 11-667 | 
| Cow position: | chr14:25783815-25784469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 5 | 
| Conread position: | 11-667 | 
| Cow position: | chr14:25859653-25860309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 17 | 
| Conread position: | 12-337 | 
| Cow position: | chr14:3100619-3100285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 169, 160 | 
| Conread position: | 12-482 | 
| Cow position: | chr14:25896004-25896469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 69, 81 | 
| Conread position: | 12-585 | 
| Cow position: | chr14:680693-681266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 323, 334 | 
| Conread position: | 12-639 | 
| Cow position: | chr14:3156116-3156734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 374, 0 | 
| Conread position: | 12-667 | 
| Cow position: | chr14:3080544-3079889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 352, 341 | 
| Conread position: | 12-667 | 
| Cow position: | chr14:3155459-3156099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 329, 334 | 
| Conread position: | 12-667 | 
| Cow position: | chr14:25836265-25836920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-667 | 
| Cow position: | chr14:25859570-25860225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 13 | 
| Conread position: | 12-667 | 
| Cow position: | chr14:25859822-25860477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 168 | 
| Conread position: | 14-662 | 
| Cow position: | chr14:25795046-25794398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 85 | 
| Conread position: | 14-665 | 
| Cow position: | chr14:25859489-25860139 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 8 | 
| Conread position: | 14-666 | 
| Cow position: | chr14:3101116-3100469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 246, 59 | 
| Conread position: | 15-578 | 
| Cow position: | chr14:25794709-25794147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 88 | 
| Conread position: | 15-665 | 
| Cow position: | chr14:25784069-25784719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 425, 415 | 
| Conread position: | 15-667 | 
| Cow position: | chr14:25795297-25794645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 243, 252 | 
| Conread position: | 16-426 | 
| Cow position: | chr14:680865-681275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 412 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 146, 166 | 
| Conread position: | 16-667 | 
| Cow position: | chr14:25794875-25794224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 6 | 
| Conread position: | 18-667 | 
| Cow position: | chr14:25836524-25837172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 21-667 | 
| Cow position: | chr14:25783487-25784133 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 415, 393 | 
| Conread position: | 22-667 | 
| Cow position: | chr14:25795458-25794813 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 71 | 
| Conread position: | 23-632 | 
| Cow position: | chr14:3155875-3156484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 226, 242 | 
| Conread position: | 23-667 | 
| Cow position: | chr14:25783321-25783965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 61 | 
| Conread position: | 23-667 | 
| Cow position: | chr14:25836108-25836752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 341 | 
| Conread position: | 24-469 | 
| Cow position: | chr14:25836781-25837226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 284 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 184, 174 | 
| Conread position: | 26-358 | 
| Cow position: | chr14:680959-681291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 334 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 250, 242 | 
| Conread position: | 26-429 | 
| Cow position: | chr14:3155389-3155792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 73, 68 | 
| Conread position: | 26-505 | 
| Cow position: | chr14:447737-448216 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 399, 422 | 
| Conread position: | 26-592 | 
| Cow position: | chr14:25784164-25784730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 66 | 
| Conread position: | 26-667 | 
| Cow position: | chr14:3080446-3079805 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 307, 318 | 
| Conread position: | 26-667 | 
| Cow position: | chr14:25783408-25784049 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 18 | 
| Conread position: | 26-667 | 
| Cow position: | chr14:25783744-25784385 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 63 | 
| Conread position: | 26-667 | 
| Cow position: | chr14:25783996-25784637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 66 | 
| Conread position: | 26-667 | 
| Cow position: | chr14:25876971-25877612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 83 | 
| Conread position: | 27-331 | 
| Cow position: | chr14:25910980-25911284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 230, 238 | 
| Conread position: | 27-397 | 
| Cow position: | chr14:25910896-25911266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-501 | 
| Cow position: | chr14:680792-681266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 154, 145 | 
| Conread position: | 27-508 | 
| Cow position: | chr14:25877392-25877873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 49, 65 | 
| Conread position: | 27-580 | 
| Cow position: | chr14:447654-448207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 314, 319 | 
| Conread position: | 27-583 | 
| Cow position: | chr14:3127873-3127317 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 68 | 
| Conread position: | 27-638 | 
| Cow position: | chr14:3080277-3079666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 342, 349 | 
| Conread position: | 27-641 | 
| Cow position: | chr14:25836616-25837231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 401, 414 | 
| Conread position: | 27-646 | 
| Cow position: | chr14:3080361-3079742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 76, 68 | 
| Conread position: | 27-656 | 
| Cow position: | chr14:25895767-25896396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 307, 337 | 
| Conread position: | 27-661 | 
| Cow position: | chr14:3128041-3127407 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 337, 327 | 
| Conread position: | 27-663 | 
| Cow position: | chr14:3156047-3156674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 72 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:680540-681180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 314, 319 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:3080613-3079973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 326, 334 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:3080697-3080057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 314, 319 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:3100938-3100291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 314, 50 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:3128125-3127485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 234, 244 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25835860-25836500 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 570, 563 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25836196-25836836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25836364-25837004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 561, 573 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25836448-25837088 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 71 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25859333-25859973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 408, 391 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25859417-25860057 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 72 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25859921-25860561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 82 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25876384-25877024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 32 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25876636-25877276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 411, 417 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25876804-25877444 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 148 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25876888-25877528 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 558, 574 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25895095-25895735 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 6e-38 | 
| Alignm gaps (pig, cow): | 164, 146 | 
| Conread position: | 27-667 | 
| Cow position: | chr14:25895683-25896323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 159, 147 | 
| Conread position: | 28-509 | 
| Cow position: | chr14:3100771-3100282 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 251, 233 | 
| Conread position: | 28-667 | 
| Cow position: | chr14:3128208-3127569 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 144 | 
| Conread position: | 33-502 | 
| Cow position: | chr14:25910818-25911288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 398, 408 | 
| Conread position: | 36-667 | 
| Cow position: | chr14:25876225-25876856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 85 | 
| Conread position: | 37-585 | 
| Cow position: | chr14:25910742-25911285 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 315, 52 | 
| Conread position: | 39-505 | 
| Cow position: | chr14:3127777-3127311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 128 | 
| Conread position: | 39-667 | 
| Cow position: | chr14:25877152-25877780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 46 | 
| Conread position: | 39-667 | 
| Cow position: | chr14:25895023-25895651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 140, 146 | 
| Conread position: | 39-667 | 
| Cow position: | chr14:25895443-25896071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 378, 382 | 
| Conread position: | 42-667 | 
| Cow position: | chr14:25835791-25836416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 115 | 
| Conread position: | 44-663 | 
| Cow position: | chr14:3101005-3100390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 296, 136 | 
| Conread position: | 44-667 | 
| Cow position: | chr14:3080848-3080225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 297, 302 | 
| Conread position: | 47-667 | 
| Cow position: | chr14:25860109-25860729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 38 | 
| Conread position: | 69-667 | 
| Cow position: | chr14:680666-681264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 205, 198 | 
| Conread position: | 105-667 | 
| Cow position: | chr14:3128214-3127653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 103, 7 | 
| Conread position: | 109-664 | 
| Cow position: | chr14:447568-448123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 148, 160 | 
| Conread position: | 109-664 | 
| Cow position: | chr14:3101440-3100889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 63 | 
| Conread position: | 111-661 | 
| Cow position: | chr14:25859249-25859799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 409, 421 | 
| Conread position: | 111-664 | 
| Cow position: | chr14:25783325-25783878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 119, 101 | 
| Conread position: | 117-663 | 
| Cow position: | chr14:25910738-25911278 (view UCSC Genome Browser custom track) | 
| Alignm length: | 548 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 52 | 
| Conread position: | 126-667 | 
| Cow position: | chr14:25835707-25836248 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 4e-33 | 
| Alignm gaps (pig, cow): | 64, 79 | 
| Conread position: | 135-556 | 
| Cow position: | chr14:3155414-3155835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 9e-31 | 
| Alignm gaps (pig, cow): | 117, 130 | 
| Conread position: | 156-665 | 
| Cow position: | chr14:447531-448040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 185, 190 | 
| Conread position: | 186-667 | 
| Cow position: | chr14:25783316-25783797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 186-667 | 
| Cow position: | chr14:25795462-25794981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 79 | 
| Conread position: | 194-642 | 
| Cow position: | chr14:3155389-3155837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 63, 71 | 
| Conread position: | 197-667 | 
| Cow position: | chr14:25910735-25911200 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 9 | 
| Conread position: | 203-667 | 
| Cow position: | chr14:25876224-25876688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 469 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 82, 55 | 
| Conread position: | 206-667 | 
| Cow position: | chr14:25859176-25859637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 389, 395 | 
| Conread position: | 208-394 | 
| Cow position: | chr14:3156555-3156740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 187 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 172, 0 | 
| Conread position: | 210-667 | 
| Cow position: | chr14:25894942-25895399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 462 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 131, 154 | 
| Conread position: | 246-665 | 
| Cow position: | chr14:25835659-25836078 (view UCSC Genome Browser custom track) | 
| Alignm length: | 421 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 360, 370 | 
| Conread position: | 265-667 | 
| Cow position: | chr14:25910718-25911116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 8, 23 | 
| Conread position: | 275-506 | 
| Cow position: | chr14:420619-420851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 154 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 11, 151 | 
| Conread position: | 295-646 | 
| Cow position: | chr14:3155406-3155757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 352 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 365-667 | 
| Cow position: | chr14:3155881-3156183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 379-667 | 
| Cow position: | chr14:3155406-3155694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 56, 51 | 
| Conread position: | 447-667 | 
| Cow position: | chr14:3101438-3101219 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 146 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 154, 114 | 
| Conread position: | 457-667 | 
| Cow position: | chr14:420634-420844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 130, 144 | 
| Conread position: | 1-310 | 
| Cow position: | chr16:14627042-14626733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 86, 98 | 
| Conread position: | 1-393 | 
| Cow position: | chr16:14627126-14626734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 174 | 
| Conread position: | 5-667 | 
| Cow position: | chr16:14627963-14627300 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 23, 169 | 
| Conread position: | 15-667 | 
| Cow position: | chr16:14627783-14627132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 0 | 
| Conread position: | 26-646 | 
| Cow position: | chr16:14627353-14626733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 59 | 
| Conread position: | 27-667 | 
| Cow position: | chr16:14627436-14626796 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 337, 326 | 
| Conread position: | 33-667 | 
| Cow position: | chr16:14627682-14627048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 59 | 
| Conread position: | 1-506 | 
| Cow position: | chr17:22473457-22473963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 24 | 
| Conread position: | 1-555 | 
| Cow position: | chr17:22589727-22589173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-663 | 
| Cow position: | chr17:22552645-22551983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 26 | 
| Conread position: | 1-667 | 
| Cow position: | chr17:22552225-22551559 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 600, 581 | 
| Conread position: | 1-667 | 
| Cow position: | chr17:22552309-22551643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 27 | 
| Conread position: | 1-667 | 
| Cow position: | chr17:22553065-22552399 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 506, 517 | 
| Conread position: | 8-410 | 
| Cow position: | chr17:22551882-22551480 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 243, 236 | 
| Conread position: | 8-667 | 
| Cow position: | chr17:22552890-22552231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 430, 423 | 
| Conread position: | 9-637 | 
| Cow position: | chr17:22589803-22589175 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 434, 416 | 
| Conread position: | 9-646 | 
| Cow position: | chr17:22552133-22551496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 498, 509 | 
| Conread position: | 9-652 | 
| Cow position: | chr17:22552553-22551910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 501, 509 | 
| Conread position: | 9-653 | 
| Cow position: | chr17:22590139-22589495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-667 | 
| Cow position: | chr17:22552385-22551727 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 498, 509 | 
| Conread position: | 9-667 | 
| Cow position: | chr17:22552805-22552147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 518, 522 | 
| Conread position: | 9-667 | 
| Cow position: | chr17:22552973-22552315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 501, 515 | 
| Conread position: | 9-667 | 
| Cow position: | chr17:22553141-22552483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 353, 345 | 
| Conread position: | 9-667 | 
| Cow position: | chr17:22589887-22589229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 521, 517 | 
| Conread position: | 9-667 | 
| Cow position: | chr17:22590223-22589565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 160 | 
| Conread position: | 10-667 | 
| Cow position: | chr17:22590306-22589649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 11-422 | 
| Cow position: | chr17:22452080-22451669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 416 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 100 | 
| Conread position: | 12-563 | 
| Cow position: | chr17:22499093-22498542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 91 | 
| Conread position: | 12-663 | 
| Cow position: | chr17:22590052-22589401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-666 | 
| Cow position: | chr17:22452331-22451677 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 419, 428 | 
| Conread position: | 13-502 | 
| Cow position: | chr17:22452162-22451673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 162 | 
| Conread position: | 15-664 | 
| Cow position: | chr17:22452412-22451763 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 157 | 
| Conread position: | 23-328 | 
| Cow position: | chr17:22451900-22451595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 192 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 23-656 | 
| Cow position: | chr17:22499166-22498533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 240 | 
| Conread position: | 25-663 | 
| Cow position: | chr17:22499332-22498694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 410, 403 | 
| Conread position: | 26-579 | 
| Cow position: | chr17:22473398-22473952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 421, 400 | 
| Conread position: | 26-661 | 
| Cow position: | chr17:22499247-22498612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 310, 318 | 
| Conread position: | 26-667 | 
| Cow position: | chr17:22473233-22473871 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 30 | 
| Conread position: | 27-585 | 
| Cow position: | chr17:22452232-22451674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 314, 319 | 
| Conread position: | 27-667 | 
| Cow position: | chr17:22552451-22551811 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 309, 319 | 
| Conread position: | 27-667 | 
| Cow position: | chr17:22552703-22552063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 328 | 
| Conread position: | 31-663 | 
| Cow position: | chr17:22473319-22473952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 63 | 
| Conread position: | 34-667 | 
| Cow position: | chr17:22499409-22498774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 395 | 
| Conread position: | 102-667 | 
| Cow position: | chr17:22452409-22451844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 10 | 
| Conread position: | 106-667 | 
| Cow position: | chr17:22473229-22473787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 101, 35 | 
| Conread position: | 137-661 | 
| Cow position: | chr17:22499388-22498864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 526 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 465, 445 | 
| Conread position: | 184-667 | 
| Cow position: | chr17:22452411-22451928 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 81 | 
| Conread position: | 228-666 | 
| Cow position: | chr17:22553174-22552736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 441 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 279, 290 | 
| Conread position: | 437-662 | 
| Cow position: | chr17:22499422-22499199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 226 | 
| Alignm identity: | 152 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 1-230 | 
| Cow position: | chr18:43053419-43053190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 230 | 
| Alignm identity: | 148 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-306 | 
| Cow position: | chr18:42792600-42792905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-558 | 
| Cow position: | chr18:41198203-41198760 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 444, 428 | 
| Conread position: | 1-617 | 
| Cow position: | chr18:51812508-51811894 (view UCSC Genome Browser custom track) | 
| Alignm length: | 621 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 27 | 
| Conread position: | 1-639 | 
| Cow position: | chr18:50295228-50295866 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 275, 262 | 
| Conread position: | 1-664 | 
| Cow position: | chr18:43094199-43093555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 15 | 
| Conread position: | 1-666 | 
| Cow position: | chr18:51789265-51788602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 27 | 
| Conread position: | 1-667 | 
| Cow position: | chr18:50059247-50058581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 364, 353 | 
| Conread position: | 1-667 | 
| Cow position: | chr18:54979684-54980350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 672 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 171 | 
| Conread position: | 1-667 | 
| Cow position: | chr18:55523348-55524014 (view UCSC Genome Browser custom track) | 
| Alignm length: | 674 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 168 | 
| Conread position: | 1-667 | 
| Cow position: | chr18:56329895-56329229 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 340, 345 | 
| Conread position: | 2-667 | 
| Cow position: | chr18:53586874-53586209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 173 | 
| Conread position: | 3-381 | 
| Cow position: | chr18:53560389-53560766 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 91, 20 | 
| Conread position: | 3-393 | 
| Cow position: | chr18:33063972-33063582 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 92, 103 | 
| Conread position: | 3-474 | 
| Cow position: | chr18:43168086-43168555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 461, 0 | 
| Conread position: | 3-555 | 
| Cow position: | chr18:43022525-43021973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 89 | 
| Conread position: | 3-594 | 
| Cow position: | chr18:43120113-43119522 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 108 | 
| Conread position: | 3-662 | 
| Cow position: | chr18:51752125-51751470 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 92 | 
| Conread position: | 3-667 | 
| Cow position: | chr18:43167834-43168498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 151, 147 | 
| Conread position: | 3-667 | 
| Cow position: | chr18:44253765-44253114 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 89 | 
| Conread position: | 4-667 | 
| Cow position: | chr18:43094030-43093384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 13 | 
| Conread position: | 4-667 | 
| Cow position: | chr18:50049269-50048601 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 359 | 
| Conread position: | 6-505 | 
| Cow position: | chr18:50030940-50030436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 505 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 142, 0 | 
| Conread position: | 7-188 | 
| Cow position: | chr18:51969880-51970061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 182 | 
| Alignm identity: | 124 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 7-337 | 
| Cow position: | chr18:53498607-53498937 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 113, 16 | 
| Conread position: | 7-429 | 
| Cow position: | chr18:53509537-53509958 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 327, 16 | 
| Conread position: | 7-629 | 
| Cow position: | chr18:50058989-50058369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 21 | 
| Conread position: | 8-253 | 
| Cow position: | chr18:51367464-51367218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 247 | 
| Alignm identity: | 163 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 241, 0 | 
| Conread position: | 8-323 | 
| Cow position: | chr18:51839094-51838779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 82, 91 | 
| Conread position: | 8-357 | 
| Cow position: | chr18:51874355-51874704 (view UCSC Genome Browser custom track) | 
| Alignm length: | 351 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 10, 20 | 
| Conread position: | 8-513 | 
| Cow position: | chr18:50281805-50282309 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 325, 337 | 
| Conread position: | 8-566 | 
| Cow position: | chr18:50021933-50021372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 192, 442 | 
| Conread position: | 8-568 | 
| Cow position: | chr18:53586531-53585972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 15 | 
| Conread position: | 8-570 | 
| Cow position: | chr18:55523776-55524337 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 257, 15 | 
| Conread position: | 8-577 | 
| Cow position: | chr18:50048756-50048193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 424, 0 | 
| Conread position: | 8-624 | 
| Cow position: | chr18:43167923-43168539 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 356, 344 | 
| Conread position: | 8-635 | 
| Cow position: | chr18:50099695-50100321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 16 | 
| Conread position: | 8-642 | 
| Cow position: | chr18:55066978-55066345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 259, 19 | 
| Conread position: | 8-663 | 
| Cow position: | chr18:51368387-51367733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 85 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:42675607-42674951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 70 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:42792103-42792762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:42837889-42837230 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 81 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:44239718-44240379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 84 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:50083245-50083904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 34 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:50083413-50084072 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 16 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:51765615-51764956 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 20 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:51765700-51765040 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 92 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:51765951-51765292 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 91 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:53586951-53586293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 20, 14 | 
| Conread position: | 8-667 | 
| Cow position: | chr18:56433763-56434415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 130, 183 | 
| Conread position: | 9-221 | 
| Cow position: | chr18:42743997-42743785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 90, 84 | 
| Conread position: | 9-247 | 
| Cow position: | chr18:50021593-50021357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 151, 158 | 
| Conread position: | 9-284 | 
| Cow position: | chr18:50849223-50849498 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 177 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-378 | 
| Cow position: | chr18:50048503-50048140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 242, 165 | 
| Conread position: | 9-385 | 
| Cow position: | chr18:44397887-44397511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-406 | 
| Cow position: | chr18:42827620-42828020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 305, 342 | 
| Conread position: | 9-429 | 
| Cow position: | chr18:50849055-50849475 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 324, 336 | 
| Conread position: | 9-474 | 
| Cow position: | chr18:42792440-42792905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-477 | 
| Cow position: | chr18:50281890-50282360 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 240, 249 | 
| Conread position: | 9-504 | 
| Cow position: | chr18:50271677-50272171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 76 | 
| Conread position: | 9-505 | 
| Cow position: | chr18:50083750-50084246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 502 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 16 | 
| Conread position: | 9-558 | 
| Cow position: | chr18:42792356-42792905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 236 | 
| Conread position: | 9-584 | 
| Cow position: | chr18:55008775-55009348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 241, 256 | 
| Conread position: | 9-624 | 
| Cow position: | chr18:50022016-50021398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 7 | 
| Conread position: | 9-636 | 
| Cow position: | chr18:40306721-40307348 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 271, 249 | 
| Conread position: | 9-645 | 
| Cow position: | chr18:1417966-1418602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 211, 203 | 
| Conread position: | 9-646 | 
| Cow position: | chr18:50059491-50058854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 160 | 
| Conread position: | 9-648 | 
| Cow position: | chr18:50848803-50849442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 15 | 
| Conread position: | 9-652 | 
| Cow position: | chr18:42694000-42693357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 242, 256 | 
| Conread position: | 9-652 | 
| Cow position: | chr18:42791516-42792159 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 332, 337 | 
| Conread position: | 9-662 | 
| Cow position: | chr18:50022442-50021783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 19 | 
| Conread position: | 9-663 | 
| Cow position: | chr18:42693664-42693012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 342, 353 | 
| Conread position: | 9-664 | 
| Cow position: | chr18:51765866-51765211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 19 | 
| Conread position: | 9-664 | 
| Cow position: | chr18:51812668-51812013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 103 | 
| Conread position: | 9-665 | 
| Cow position: | chr18:54966999-54967655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 345, 354 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:41197791-41198449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 256 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:42744669-42744011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 83 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:42791012-42791670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 165 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:42791264-42791922 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 236 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:42791600-42792258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 592, 581 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:42791936-42792594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 166 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:42792188-42792846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 578, 590 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:43093454-43092797 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 239, 247 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:43093622-43092964 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:50059575-50058917 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 600, 607 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:50059659-50059001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 158 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:50099023-50099681 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 339, 347 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:50271425-50272083 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 15 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:50848215-50848873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 264, 270 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:50848551-50849209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 7 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:51400328-51400986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 326, 337 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:51789509-51788851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 103 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:52446988-52447646 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 85 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:52447156-52447814 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 85 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:52447408-52448066 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 80 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:53587119-53586461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 11, 6 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:54967251-54967906 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 500, 442 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:54979524-54980182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 92, 82 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:54979776-54980434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 6 | 
| Conread position: | 9-667 | 
| Cow position: | chr18:54992784-54993442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 6 | 
| Conread position: | 11-654 | 
| Cow position: | chr18:43175138-43174495 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 92 | 
| Conread position: | 11-667 | 
| Cow position: | chr18:42792022-42792678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 590, 569 | 
| Conread position: | 11-667 | 
| Cow position: | chr18:44253589-44252947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 84 | 
| Conread position: | 12-297 | 
| Cow position: | chr18:44240564-44240849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-327 | 
| Cow position: | chr18:43048677-43048362 (view UCSC Genome Browser custom track) | 
| Alignm length: | 317 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 78, 91 | 
| Conread position: | 12-373 | 
| Cow position: | chr18:56247350-56246995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 92, 82 | 
| Conread position: | 12-381 | 
| Cow position: | chr18:42984837-42984468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-486 | 
| Cow position: | chr18:42674850-42674376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 336 | 
| Conread position: | 12-538 | 
| Cow position: | chr18:42959912-42959396 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 14 | 
| Conread position: | 12-539 | 
| Cow position: | chr18:56316436-56316963 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 56, 61 | 
| Conread position: | 12-554 | 
| Cow position: | chr18:42837633-42837091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 423, 413 | 
| Conread position: | 12-568 | 
| Cow position: | chr18:52428440-52428996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 79 | 
| Conread position: | 12-568 | 
| Cow position: | chr18:52433621-52434177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 79 | 
| Conread position: | 12-585 | 
| Cow position: | chr18:49022697-49023270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 323, 334 | 
| Conread position: | 12-633 | 
| Cow position: | chr18:42744414-42743793 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-639 | 
| Cow position: | chr18:41198130-41198757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 329, 338 | 
| Conread position: | 12-646 | 
| Cow position: | chr18:52447747-52448382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 167 | 
| Conread position: | 12-649 | 
| Cow position: | chr18:40324581-40323944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 346, 329 | 
| Conread position: | 12-653 | 
| Cow position: | chr18:50049174-50048531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 259 | 
| Conread position: | 12-658 | 
| Cow position: | chr18:56247678-56247043 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 175, 162 | 
| Conread position: | 12-664 | 
| Cow position: | chr18:41949129-41948477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 91 | 
| Conread position: | 12-664 | 
| Cow position: | chr18:44253504-44252873 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 80 | 
| Conread position: | 12-664 | 
| Cow position: | chr18:51789590-51788938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 173 | 
| Conread position: | 12-665 | 
| Cow position: | chr18:41949045-41948392 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 80 | 
| Conread position: | 12-666 | 
| Cow position: | chr18:42791687-42792341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 139 | 
| Conread position: | 12-666 | 
| Cow position: | chr18:53610332-53609679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 266 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:40324749-40324094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 138 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:41197710-41198365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:41948961-41948307 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 254, 250 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:41949213-41948558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 91 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:41949297-41948642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 237, 253 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:42744498-42743843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 82 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:42837801-42837146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 98 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:42960080-42959434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 253 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:42960248-42959602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 243, 255 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:43120188-43119533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 164 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:43175305-43174650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 77 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:43175473-43174818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 329, 343 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:44254004-44253354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 91 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:44398388-44397733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 155 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:49032995-49032340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 428, 421 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:50059320-50058665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:50245877-50246531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 6 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:51368467-51367812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 91 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:51766031-51765376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 87 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:51789758-51789103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 86 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:51812749-51812094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 241, 233 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:51812917-51812262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 163 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:52427768-52428423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 81 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:52428020-52428675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 458 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 323, 344 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:52428188-52428843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 462 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 79 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:52433117-52433772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 81 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:52433201-52433856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 323, 344 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:52447075-52447730 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 150, 167 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:52447243-52447898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 423, 418 | 
| Conread position: | 12-667 | 
| Cow position: | chr18:53586696-53586041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 164, 176 | 
| Conread position: | 13-422 | 
| Cow position: | chr18:51969643-51970042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 72 | 
| Conread position: | 13-550 | 
| Cow position: | chr18:56329379-56328842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 162 | 
| Conread position: | 13-583 | 
| Cow position: | chr18:56434350-56434919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 76, 14 | 
| Conread position: | 13-585 | 
| Cow position: | chr18:50031014-50030440 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 189, 74 | 
| Conread position: | 13-637 | 
| Cow position: | chr18:53560147-53560770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 5 | 
| Conread position: | 13-654 | 
| Cow position: | chr18:42675017-42674376 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 79 | 
| Conread position: | 13-656 | 
| Cow position: | chr18:14453968-14453322 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 97, 82 | 
| Conread position: | 13-661 | 
| Cow position: | chr18:44398219-44397571 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 333 | 
| Conread position: | 13-661 | 
| Cow position: | chr18:49021373-49022015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 15, 9 | 
| Conread position: | 13-666 | 
| Cow position: | chr18:56330219-56329566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:33064550-33063896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 337, 350 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:40306305-40306959 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 76 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:42675185-42674531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 90 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:42791856-42792510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:42960493-42959845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 239, 148 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:42985172-42984518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 459 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 74 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:42985424-42984770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 14 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:43022683-43022029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 79 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:43022935-43022281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 588, 582 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:43120271-43119617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 75 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:44184666-44184012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 423, 414 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:44184750-44184096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 351, 346 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:44184834-44184180 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:44240145-44240799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 75 | 
| Conread position: | 13-667 | 
| Cow position: | chr18:56329547-56328893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 342 | 
| Conread position: | 14-549 | 
| Cow position: | chr18:42985003-42984468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 76 | 
| Conread position: | 14-555 | 
| Cow position: | chr18:43168014-43168554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 8 | 
| Conread position: | 14-558 | 
| Cow position: | chr18:44184496-44183953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 11 | 
| Conread position: | 14-663 | 
| Cow position: | chr18:40086461-40085822 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 88 | 
| Conread position: | 14-667 | 
| Cow position: | chr18:42985506-42984854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 254, 9 | 
| Conread position: | 14-667 | 
| Cow position: | chr18:50848641-50849293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 326, 11 | 
| Conread position: | 15-592 | 
| Cow position: | chr18:44153977-44153419 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 256, 8 | 
| Conread position: | 15-664 | 
| Cow position: | chr18:51812830-51812181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 586, 580 | 
| Conread position: | 15-667 | 
| Cow position: | chr18:40086882-40086228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 102 | 
| Conread position: | 15-667 | 
| Cow position: | chr18:40324661-40324010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 7 | 
| Conread position: | 15-667 | 
| Cow position: | chr18:42791438-42792090 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 349, 336 | 
| Conread position: | 15-667 | 
| Cow position: | chr18:44239895-44240547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 74 | 
| Conread position: | 15-667 | 
| Cow position: | chr18:50848725-50849377 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 15-667 | 
| Cow position: | chr18:56330048-56329397 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 248, 11 | 
| Conread position: | 16-506 | 
| Cow position: | chr18:51367707-51367218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 6 | 
| Conread position: | 16-549 | 
| Cow position: | chr18:44240317-44240849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 6 | 
| Conread position: | 16-593 | 
| Cow position: | chr18:42959991-42959424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 419, 7 | 
| Conread position: | 16-633 | 
| Cow position: | chr18:43175048-43174441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 620 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 6 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:40086713-40086062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 168, 11 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:43022763-43022113 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 252, 6 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:43023015-43022365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 251, 11 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:43175216-43174566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 7 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:43175552-43174902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 194, 7 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:44240065-44240715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 7 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:49033327-49032676 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 322, 338 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:51812997-51812346 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 83 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:55017765-55018418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 12, 161 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:55017935-55018586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 335, 343 | 
| Conread position: | 16-667 | 
| Cow position: | chr18:55018019-55018670 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 96 | 
| Conread position: | 17-427 | 
| Cow position: | chr18:51839252-51838843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 415 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 10 | 
| Conread position: | 17-632 | 
| Cow position: | chr18:49032654-49032039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 17-667 | 
| Cow position: | chr18:40086373-40085733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 6 | 
| Conread position: | 17-667 | 
| Cow position: | chr18:42744742-42744095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 16 | 
| Conread position: | 17-667 | 
| Cow position: | chr18:51969313-51969952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 165, 157 | 
| Conread position: | 18-510 | 
| Cow position: | chr18:33092797-33092311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 69, 94 | 
| Conread position: | 18-644 | 
| Cow position: | chr18:33092965-33092345 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 262, 256 | 
| Conread position: | 18-663 | 
| Cow position: | chr18:55008700-55009343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 71 | 
| Conread position: | 18-667 | 
| Cow position: | chr18:41198052-41198701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 569, 579 | 
| Conread position: | 18-667 | 
| Cow position: | chr18:52427942-52428591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 73 | 
| Conread position: | 19-310 | 
| Cow position: | chr18:14453146-14452855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 19-339 | 
| Cow position: | chr18:40075333-40075653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 322 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 60, 84 | 
| Conread position: | 19-410 | 
| Cow position: | chr18:44153655-44153267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 94, 0 | 
| Conread position: | 19-484 | 
| Cow position: | chr18:51970314-51970771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 48, 54 | 
| Conread position: | 19-582 | 
| Cow position: | chr18:50048913-50048350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 259, 244 | 
| Conread position: | 19-667 | 
| Cow position: | chr18:52427691-52428339 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 582, 574 | 
| Conread position: | 19-667 | 
| Cow position: | chr18:52433040-52433688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 416, 406 | 
| Conread position: | 19-667 | 
| Cow position: | chr18:52446914-52447562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 451, 445 | 
| Conread position: | 20-665 | 
| Cow position: | chr18:14454047-14453400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 410 | 
| Conread position: | 21-505 | 
| Cow position: | chr18:50048827-50048343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 313, 325 | 
| Conread position: | 21-647 | 
| Cow position: | chr18:50049079-50048453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 332, 339 | 
| Conread position: | 21-652 | 
| Cow position: | chr18:50271521-50272151 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 325 | 
| Conread position: | 21-652 | 
| Cow position: | chr18:52428365-52428996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 70 | 
| Conread position: | 21-652 | 
| Cow position: | chr18:52433546-52434177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 72 | 
| Conread position: | 21-666 | 
| Cow position: | chr18:50048995-50048350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 322, 344 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:42791780-42792426 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 45 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:44154478-44153836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 78 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:44184910-44184264 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 78 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:50099371-50100017 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 335 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:50099539-50100185 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 64 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:50246137-50246783 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 238, 248 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:52433462-52434108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 414, 404 | 
| Conread position: | 21-667 | 
| Cow position: | chr18:52447336-52447982 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 23 | 
| Conread position: | 22-584 | 
| Cow position: | chr18:50281735-50282297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 487, 495 | 
| Conread position: | 22-591 | 
| Cow position: | chr18:53509383-53509952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 55, 81 | 
| Conread position: | 22-591 | 
| Cow position: | chr18:53525837-53526406 (view UCSC Genome Browser custom track) | 
| Alignm length: | 573 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 68, 81 | 
| Conread position: | 22-637 | 
| Cow position: | chr18:49021547-49022160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 115, 25 | 
| Conread position: | 22-637 | 
| Cow position: | chr18:50246222-50246837 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 238, 248 | 
| Conread position: | 22-664 | 
| Cow position: | chr18:56128098-56128740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 565, 577 | 
| Conread position: | 22-667 | 
| Cow position: | chr18:42985583-42984938 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 70 | 
| Conread position: | 22-667 | 
| Cow position: | chr18:50245970-50246615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 63 | 
| Conread position: | 22-667 | 
| Cow position: | chr18:55008538-55009181 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 18 | 
| Conread position: | 23-337 | 
| Cow position: | chr18:40085958-40085642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 70, 80 | 
| Conread position: | 23-508 | 
| Cow position: | chr18:53509468-53509953 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 155, 163 | 
| Conread position: | 23-561 | 
| Cow position: | chr18:50295418-50295952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 452, 0 | 
| Conread position: | 23-584 | 
| Cow position: | chr18:50100045-50100591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 53, 66 | 
| Conread position: | 23-585 | 
| Cow position: | chr18:53525922-53526482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 155, 139 | 
| Conread position: | 23-639 | 
| Cow position: | chr18:42792286-42792902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 486, 494 | 
| Conread position: | 23-647 | 
| Cow position: | chr18:55523706-55524330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 147, 165 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:41197889-41198533 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 149 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:42675091-42674447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 163, 154 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:44239987-44240631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 159 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:50099121-50099765 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 246 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:50099205-50099849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 62 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:50099625-50100269 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 62 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:50246055-50246699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 62 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:50250899-50251537 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 401, 28 | 
| Conread position: | 23-667 | 
| Cow position: | chr18:56248179-56247527 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 15 | 
| Conread position: | 24-633 | 
| Cow position: | chr18:43022588-43021979 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 66 | 
| Conread position: | 24-633 | 
| Cow position: | chr18:44240240-44240849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 241 | 
| Conread position: | 25-334 | 
| Cow position: | chr18:50021661-50021354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 310 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 291, 0 | 
| Conread position: | 25-338 | 
| Cow position: | chr18:50083934-50084247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 314 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 25-560 | 
| Cow position: | chr18:53635392-53634859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 539 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 232, 241 | 
| Conread position: | 25-633 | 
| Cow position: | chr18:42985076-42984468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 68 | 
| Conread position: | 25-662 | 
| Cow position: | chr18:50059139-50058502 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 482, 497 | 
| Conread position: | 25-667 | 
| Cow position: | chr18:33064622-33063980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 338, 314 | 
| Conread position: | 25-667 | 
| Cow position: | chr18:41949368-41948726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 67 | 
| Conread position: | 25-667 | 
| Cow position: | chr18:53635812-53635170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 62 | 
| Conread position: | 26-303 | 
| Cow position: | chr18:50246562-50246839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 278 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-327 | 
| Cow position: | chr18:43048579-43048281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 198 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 72, 62 | 
| Conread position: | 26-383 | 
| Cow position: | chr18:56329198-56328841 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 235 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 78, 69 | 
| Conread position: | 26-405 | 
| Cow position: | chr18:55523961-55524340 (view UCSC Genome Browser custom track) | 
| Alignm length: | 382 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 161, 147 | 
| Conread position: | 26-416 | 
| Cow position: | chr18:56128942-56129330 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 7e-28 | 
| Alignm gaps (pig, cow): | 223, 190 | 
| Conread position: | 26-423 | 
| Cow position: | chr18:22634705-22635102 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 241 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 158, 147 | 
| Conread position: | 26-495 | 
| Cow position: | chr18:56494077-56494543 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 8e-40 | 
| Alignm gaps (pig, cow): | 149, 162 | 
| Conread position: | 26-508 | 
| Cow position: | chr18:51839328-51838846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-526 | 
| Cow position: | chr18:51874205-51874705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 503 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 71 | 
| Conread position: | 26-556 | 
| Cow position: | chr18:40075172-40075702 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 67 | 
| Conread position: | 26-557 | 
| Cow position: | chr18:42744316-42743785 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 326, 333 | 
| Conread position: | 26-564 | 
| Cow position: | chr18:42827385-42827923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 78 | 
| Conread position: | 26-578 | 
| Cow position: | chr18:43120006-43119454 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 64 | 
| Conread position: | 26-580 | 
| Cow position: | chr18:56316282-56316836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 61, 71 | 
| Conread position: | 26-583 | 
| Cow position: | chr18:44253335-44252789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 309, 219 | 
| Conread position: | 26-586 | 
| Cow position: | chr18:51367782-51367222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 123 | 
| Conread position: | 26-588 | 
| Cow position: | chr18:50083683-50084245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 252, 237 | 
| Conread position: | 26-598 | 
| Cow position: | chr18:50250983-50251553 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 460, 164 | 
| Conread position: | 26-599 | 
| Cow position: | chr18:51400681-51401252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 575 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 506, 493 | 
| Conread position: | 26-624 | 
| Cow position: | chr18:56493909-56494506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 374 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 157 | 
| Conread position: | 26-635 | 
| Cow position: | chr18:42837703-42837094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 68 | 
| Conread position: | 26-637 | 
| Cow position: | chr18:40075088-40075699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 73 | 
| Conread position: | 26-638 | 
| Cow position: | chr18:44398122-44397510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 149 | 
| Conread position: | 26-640 | 
| Cow position: | chr18:44184569-44183955 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 404, 409 | 
| Conread position: | 26-645 | 
| Cow position: | chr18:53586598-53585980 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 181, 156 | 
| Conread position: | 26-646 | 
| Cow position: | chr18:53560075-53560695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 69 | 
| Conread position: | 26-652 | 
| Cow position: | chr18:33093041-33092416 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 78 | 
| Conread position: | 26-663 | 
| Cow position: | chr18:51367949-51367313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 67 | 
| Conread position: | 26-666 | 
| Cow position: | chr18:49022545-49023183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 137, 56 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:1417899-1418540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 281, 270 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:33064789-33064148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 79 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:40075004-40075645 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 117, 108 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:40086281-40085649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 67 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:40086533-40085902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 73 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:41197556-41198197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 315, 330 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:42675340-42674699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 76 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:42790945-42791586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 239 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:42791113-42791754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 69 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:42837955-42837314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 80 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:42985243-42984602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 234 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:43023090-43022449 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 64 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:43093521-43092880 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 323 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:43167521-43168162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 85, 75 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:44154218-44153595 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 0 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:44398290-44397649 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 141 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:50059054-50058415 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 70 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:50848148-50848789 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 314, 320 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:50848400-50849041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 315, 320 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:50848484-50849125 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:51367865-51367225 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 58 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:52432963-52433604 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 79 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:52447509-52448150 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 153 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:52447593-52448234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 68 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:53559991-53560632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 77 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:53636063-53635422 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 337, 314 | 
| Conread position: | 26-667 | 
| Cow position: | chr18:56329702-56329061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-275 | 
| Cow position: | chr18:51874458-51874706 (view UCSC Genome Browser custom track) | 
| Alignm length: | 249 | 
| Alignm identity: | 158 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-302 | 
| Cow position: | chr18:51765176-51764901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-337 | 
| Cow position: | chr18:52448098-52448410 (view UCSC Genome Browser custom track) | 
| Alignm length: | 313 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 191, 0 | 
| Conread position: | 27-393 | 
| Cow position: | chr18:14453222-14452856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 54 | 
| Conread position: | 27-433 | 
| Cow position: | chr18:51367613-51367208 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 130, 123 | 
| Conread position: | 27-448 | 
| Cow position: | chr18:54993642-54994063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 426 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 7e-38 | 
| Alignm gaps (pig, cow): | 326, 272 | 
| Conread position: | 27-480 | 
| Cow position: | chr18:42827470-42827923 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-483 | 
| Cow position: | chr18:52447930-52448387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 314, 321 | 
| Conread position: | 27-503 | 
| Cow position: | chr18:52012041-52011565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 225, 241 | 
| Conread position: | 27-507 | 
| Cow position: | chr18:50848989-50849469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-539 | 
| Cow position: | chr18:49032560-49032048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 313, 319 | 
| Conread position: | 27-584 | 
| Cow position: | chr18:51874129-51874679 (view UCSC Genome Browser custom track) | 
| Alignm length: | 560 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 221, 41 | 
| Conread position: | 27-596 | 
| Cow position: | chr18:51765512-51764942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 84 | 
| Conread position: | 27-607 | 
| Cow position: | chr18:51969491-51970060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 123 | 
| Conread position: | 27-637 | 
| Cow position: | chr18:55018282-55018891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 52, 76 | 
| Conread position: | 27-639 | 
| Cow position: | chr18:51400598-51401210 (view UCSC Genome Browser custom track) | 
| Alignm length: | 617 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 232 | 
| Conread position: | 27-639 | 
| Cow position: | chr18:51874045-51874650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 72 | 
| Conread position: | 27-640 | 
| Cow position: | chr18:55018198-55018812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 621 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 68 | 
| Conread position: | 27-641 | 
| Cow position: | chr18:54980130-54980741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 68 | 
| Conread position: | 27-646 | 
| Cow position: | chr18:33064200-33063581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 397, 409 | 
| Conread position: | 27-649 | 
| Cow position: | chr18:53635474-53634854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 67 | 
| Conread position: | 27-651 | 
| Cow position: | chr18:54967938-54968561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 93 | 
| Conread position: | 27-652 | 
| Cow position: | chr18:50022169-50021538 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 104, 327 | 
| Conread position: | 27-653 | 
| Cow position: | chr18:51838720-51838105 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 49, 70 | 
| Conread position: | 27-655 | 
| Cow position: | chr18:56316115-56316743 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 412, 396 | 
| Conread position: | 27-662 | 
| Cow position: | chr18:44153888-44153267 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 148 | 
| Conread position: | 27-663 | 
| Cow position: | chr18:51969407-51970032 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 148 | 
| Conread position: | 27-663 | 
| Cow position: | chr18:53559740-53560374 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 251, 236 | 
| Conread position: | 27-664 | 
| Cow position: | chr18:42693898-42693261 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 52, 66 | 
| Conread position: | 27-664 | 
| Cow position: | chr18:42791198-42791835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 309, 301 | 
| Conread position: | 27-664 | 
| Cow position: | chr18:51752185-51751547 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 146 | 
| Conread position: | 27-664 | 
| Cow position: | chr18:51789407-51788770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 217, 238 | 
| Conread position: | 27-664 | 
| Cow position: | chr18:54992970-54993607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 588, 577 | 
| Conread position: | 27-664 | 
| Cow position: | chr18:54993222-54993859 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 421, 397 | 
| Conread position: | 27-664 | 
| Cow position: | chr18:56329785-56329148 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-665 | 
| Cow position: | chr18:54979878-54980516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 419, 393 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:33064284-33063644 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 160 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:33064368-33063728 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 77 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:33064452-33063812 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 161 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:33064704-33064064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 84 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:40306235-40306875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 308, 318 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:40306487-40307127 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 68 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:42675255-42674615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 568, 576 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:42791366-42792006 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 265, 256 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:43093685-43093048 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 581, 11 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:43167774-43168414 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 574, 556 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:49032812-49032172 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 560, 577 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:49032896-49032256 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 314, 319 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:49033064-49032424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:49033148-49032508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 574, 563 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:49033232-49032592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 337, 326 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:50059725-50059085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 111, 101 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:50083348-50083988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 141 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:50083516-50084156 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 64 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:50099461-50100101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 242 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:51368536-51367896 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 85 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:51752269-51751629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 72 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:51789323-51788683 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:51812566-51811926 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:52012377-52011737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 61 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:52428287-52428927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 408, 398 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:52447678-52448319 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 62 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:53498035-53498678 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 84 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:53498203-53498849 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 3.9937e-43 | 
| Alignm gaps (pig, cow): | 94, 170 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:53509304-53509944 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 63 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:53525758-53526398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 61 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:53559908-53560548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 77 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:54966933-54967573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 230 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:54967353-54967990 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 67 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:54967854-54968492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 252, 177 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:54979626-54980266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 77 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:54992886-54993526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 240 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:54993054-54993694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 408, 398 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:54993138-54993778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 240 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:55067044-55066404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 158 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:55523458-55524098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 242, 222 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:55523542-55524182 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 76 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:55523626-55524266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 236 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:56128271-56128911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 253, 248 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:56247747-56247117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 314, 247 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:56329617-56328977 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 572, 553 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:56329953-56329313 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 76 | 
| Conread position: | 27-667 | 
| Cow position: | chr18:56434111-56434751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 162, 169 | 
| Conread position: | 28-508 | 
| Cow position: | chr18:51838552-51838081 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 376, 69 | 
| Conread position: | 28-584 | 
| Cow position: | chr18:22634623-22635179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 224, 253 | 
| Conread position: | 28-667 | 
| Cow position: | chr18:52427532-52428171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 153 | 
| Conread position: | 28-667 | 
| Cow position: | chr18:52432881-52433520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 153 | 
| Conread position: | 28-667 | 
| Cow position: | chr18:56493740-56494382 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 31, 23 | 
| Conread position: | 29-663 | 
| Cow position: | chr18:42960315-42959690 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 306, 316 | 
| Conread position: | 29-667 | 
| Cow position: | chr18:43120339-43119701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 126, 121 | 
| Conread position: | 30-636 | 
| Cow position: | chr18:53525678-53526283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 610 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 132, 7 | 
| Conread position: | 30-666 | 
| Cow position: | chr18:42694063-42693427 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 219, 235 | 
| Conread position: | 30-667 | 
| Cow position: | chr18:53509224-53509860 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 7 | 
| Conread position: | 30-667 | 
| Cow position: | chr18:54967773-54968408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 47 | 
| Conread position: | 31-505 | 
| Cow position: | chr18:49022800-49023274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 58, 79 | 
| Conread position: | 31-586 | 
| Cow position: | chr18:52012121-52011567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 73, 61 | 
| Conread position: | 31-667 | 
| Cow position: | chr18:44398453-44397817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 310, 319 | 
| Conread position: | 32-319 | 
| Cow position: | chr18:51970494-51970774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 158, 61 | 
| Conread position: | 32-423 | 
| Cow position: | chr18:43048741-43048350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 60 | 
| Conread position: | 32-667 | 
| Cow position: | chr18:40324813-40324178 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 61 | 
| Conread position: | 33-504 | 
| Cow position: | chr18:56128865-56129334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 300, 267 | 
| Conread position: | 33-508 | 
| Cow position: | chr18:53498465-53498940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 241, 78 | 
| Conread position: | 33-667 | 
| Cow position: | chr18:40086948-40086312 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 59 | 
| Conread position: | 33-667 | 
| Cow position: | chr18:43167612-43168246 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 91 | 
| Conread position: | 33-667 | 
| Cow position: | chr18:51400436-51401070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 135 | 
| Conread position: | 33-667 | 
| Cow position: | chr18:51766093-51765460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 15 | 
| Conread position: | 35-665 | 
| Cow position: | chr18:55008633-55009263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 69 | 
| Conread position: | 35-667 | 
| Cow position: | chr18:51839487-51838855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 138 | 
| Conread position: | 35-667 | 
| Cow position: | chr18:54967109-54967738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 62 | 
| Conread position: | 36-583 | 
| Cow position: | chr18:56128616-56129162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 145 | 
| Conread position: | 36-667 | 
| Cow position: | chr18:49022303-49022932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 51, 63 | 
| Conread position: | 36-667 | 
| Cow position: | chr18:53635549-53634919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 139 | 
| Conread position: | 36-667 | 
| Cow position: | chr18:53635717-53635086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 317 | 
| Conread position: | 37-663 | 
| Cow position: | chr18:54993400-54994023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 62, 53 | 
| Conread position: | 37-664 | 
| Cow position: | chr18:54967696-54968321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 409, 340 | 
| Conread position: | 37-667 | 
| Cow position: | chr18:53610475-53609845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 226, 234 | 
| Conread position: | 38-478 | 
| Cow position: | chr18:14453295-14452855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 143, 137 | 
| Conread position: | 38-667 | 
| Cow position: | chr18:50022071-50021439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 303, 308 | 
| Conread position: | 38-667 | 
| Cow position: | chr18:50848328-50848957 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 38-667 | 
| Cow position: | chr18:53497965-53498594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 170, 49 | 
| Conread position: | 39-634 | 
| Cow position: | chr18:56329437-56328842 (view UCSC Genome Browser custom track) | 
| Alignm length: | 600 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 302, 307 | 
| Conread position: | 39-662 | 
| Cow position: | chr18:51400526-51401149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 134 | 
| Conread position: | 39-667 | 
| Cow position: | chr18:53635630-53635003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 241, 228 | 
| Conread position: | 39-667 | 
| Cow position: | chr18:55067116-55066488 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 149 | 
| Conread position: | 39-667 | 
| Cow position: | chr18:56128535-56129162 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 597, 0 | 
| Conread position: | 42-666 | 
| Cow position: | chr18:33065109-33064485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 34 | 
| Conread position: | 42-667 | 
| Cow position: | chr18:33064941-33064316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 221 | 
| Conread position: | 42-667 | 
| Cow position: | chr18:56493841-56494466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 53 | 
| Conread position: | 43-667 | 
| Cow position: | chr18:56316047-56316671 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 59 | 
| Conread position: | 45-584 | 
| Cow position: | chr18:51838786-51838252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 540 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 201, 0 | 
| Conread position: | 47-667 | 
| Cow position: | chr18:40324882-40324262 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 46 | 
| Conread position: | 51-667 | 
| Cow position: | chr18:51969029-51969625 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 60 | 
| Conread position: | 54-667 | 
| Cow position: | chr18:50098900-50099513 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 287, 304 | 
| Conread position: | 54-667 | 
| Cow position: | chr18:53610542-53609929 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 38, 58 | 
| Conread position: | 58-667 | 
| Cow position: | chr18:50295201-50295810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 614 | 
| Alignm identity: | 384 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 140 | 
| Conread position: | 60-667 | 
| Cow position: | chr18:56128052-56128659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 610 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 527, 539 | 
| Conread position: | 67-667 | 
| Cow position: | chr18:53587232-53586629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 62, 299 | 
| Conread position: | 69-667 | 
| Cow position: | chr18:55523332-55523930 (view UCSC Genome Browser custom track) | 
| Alignm length: | 603 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 294, 279 | 
| Conread position: | 72-647 | 
| Cow position: | chr18:54992679-54993254 (view UCSC Genome Browser custom track) | 
| Alignm length: | 577 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 544, 531 | 
| Conread position: | 72-663 | 
| Cow position: | chr18:54979419-54980010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 5.60519e-45 | 
| Alignm gaps (pig, cow): | 366, 342 | 
| Conread position: | 97-667 | 
| Cow position: | chr18:51813000-51812430 (view UCSC Genome Browser custom track) | 
| Alignm length: | 576 | 
| Alignm identity: | 381 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 75 | 
| Conread position: | 98-639 | 
| Cow position: | chr18:51752282-51751741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 9 | 
| Conread position: | 102-667 | 
| Cow position: | chr18:54966924-54967489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 335, 312 | 
| Conread position: | 108-563 | 
| Cow position: | chr18:53571874-53572316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 282 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 65, 76 | 
| Conread position: | 108-667 | 
| Cow position: | chr18:22634537-22635094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 43, 81 | 
| Conread position: | 108-667 | 
| Cow position: | chr18:42960565-42960013 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 63 | 
| Conread position: | 108-667 | 
| Cow position: | chr18:53559737-53560296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 43 | 
| Conread position: | 109-667 | 
| Cow position: | chr18:49022710-49023268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 76, 66 | 
| Conread position: | 109-667 | 
| Cow position: | chr18:50059727-50059169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 337, 316 | 
| Conread position: | 109-667 | 
| Cow position: | chr18:51368623-51368064 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 157 | 
| Conread position: | 109-667 | 
| Cow position: | chr18:51789829-51789271 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 63 | 
| Conread position: | 110-663 | 
| Cow position: | chr18:56247748-56247203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 244 | 
| Conread position: | 110-667 | 
| Cow position: | chr18:40306234-40306791 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 362 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 253, 241 | 
| Conread position: | 111-314 | 
| Cow position: | chr18:43053393-43053190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 204 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 111-571 | 
| Cow position: | chr18:51970322-51970774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 136, 57 | 
| Conread position: | 111-591 | 
| Cow position: | chr18:40085954-40085461 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 148 | 
| Conread position: | 111-663 | 
| Cow position: | chr18:49021387-49021933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 67, 50 | 
| Conread position: | 111-667 | 
| Cow position: | chr18:33093040-33092484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 326, 337 | 
| Conread position: | 111-667 | 
| Cow position: | chr18:40074921-40075477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 146, 154 | 
| Conread position: | 111-667 | 
| Cow position: | chr18:51874045-51874594 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 71, 64 | 
| Conread position: | 111-667 | 
| Cow position: | chr18:56128439-56128995 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 327, 319 | 
| Conread position: | 112-665 | 
| Cow position: | chr18:42694065-42693512 (view UCSC Genome Browser custom track) | 
| Alignm length: | 556 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 221, 234 | 
| Conread position: | 112-667 | 
| Cow position: | chr18:56433368-56433921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 331, 80 | 
| Conread position: | 114-667 | 
| Cow position: | chr18:42960314-42959761 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 48, 62 | 
| Conread position: | 115-585 | 
| Cow position: | chr18:53498462-53498933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 5, 61 | 
| Conread position: | 115-667 | 
| Cow position: | chr18:1417820-1418372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 355, 349 | 
| Conread position: | 116-637 | 
| Cow position: | chr18:43048741-43048222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 439, 419 | 
| Conread position: | 118-316 | 
| Cow position: | chr18:51751345-51751146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 203 | 
| Alignm identity: | 141 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 27, 10 | 
| Conread position: | 119-667 | 
| Cow position: | chr18:51839487-51838939 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 54 | 
| Conread position: | 120-667 | 
| Cow position: | chr18:40306748-40307295 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 63 | 
| Conread position: | 122-562 | 
| Cow position: | chr18:14453295-14452855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 57 | 
| Conread position: | 122-667 | 
| Cow position: | chr18:55523301-55523846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 149, 135 | 
| Conread position: | 128-667 | 
| Cow position: | chr18:41197490-41198029 (view UCSC Genome Browser custom track) | 
| Alignm length: | 541 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 476, 484 | 
| Conread position: | 135-649 | 
| Cow position: | chr18:42827410-42827924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 516 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 452, 464 | 
| Conread position: | 135-665 | 
| Cow position: | chr18:33093100-33092570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 312, 290 | 
| Conread position: | 135-667 | 
| Cow position: | chr18:49033376-49032844 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 198, 211 | 
| Conread position: | 135-667 | 
| Cow position: | chr18:50250848-50251369 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 136, 39 | 
| Conread position: | 135-667 | 
| Cow position: | chr18:51838780-51838253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 208, 195 | 
| Conread position: | 136-667 | 
| Cow position: | chr18:40306175-40306707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 294 | 
| Conread position: | 140-667 | 
| Cow position: | chr18:43120396-43119869 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 37 | 
| Conread position: | 141-665 | 
| Cow position: | chr18:42694120-42693596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 104, 124 | 
| Conread position: | 141-667 | 
| Cow position: | chr18:53559686-53560212 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 34 | 
| Conread position: | 143-664 | 
| Cow position: | chr18:50031136-50030616 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 198, 204 | 
| Conread position: | 144-566 | 
| Cow position: | chr18:56265034-56264617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 280 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 46, 21 | 
| Conread position: | 144-667 | 
| Cow position: | chr18:43175593-43175070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 524 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 144-667 | 
| Cow position: | chr18:50098906-50099429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 207, 214 | 
| Conread position: | 151-667 | 
| Cow position: | chr18:42675383-42674867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 289, 277 | 
| Conread position: | 152-514 | 
| Cow position: | chr18:53598285-53597927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 238 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 126, 22 | 
| Conread position: | 152-663 | 
| Cow position: | chr18:50083221-50083732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 68, 58 | 
| Conread position: | 152-667 | 
| Cow position: | chr18:50245764-50246279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 108, 119 | 
| Conread position: | 156-667 | 
| Cow position: | chr18:51400307-51400818 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 322 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 6, 22 | 
| Conread position: | 156-667 | 
| Cow position: | chr18:56247786-56247283 (view UCSC Genome Browser custom track) | 
| Alignm length: | 512 | 
| Alignm identity: | 336 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 282, 0 | 
| Conread position: | 159-667 | 
| Cow position: | chr18:44254024-44253521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 7 | 
| Conread position: | 162-667 | 
| Cow position: | chr18:50281624-50282128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 509 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 65, 8 | 
| Conread position: | 169-667 | 
| Cow position: | chr18:50271417-50271915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 176, 187 | 
| Conread position: | 173-664 | 
| Cow position: | chr18:51874023-51874507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 86 | 
| Conread position: | 177-667 | 
| Cow position: | chr18:54966914-54967405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 3e-29 | 
| Alignm gaps (pig, cow): | 13, 93 | 
| Conread position: | 180-667 | 
| Cow position: | chr18:44154487-44153997 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 86 | 
| Conread position: | 180-667 | 
| Cow position: | chr18:44184919-44184432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 82 | 
| Conread position: | 181-667 | 
| Cow position: | chr18:42837968-42837482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 247, 266 | 
| Conread position: | 183-482 | 
| Cow position: | chr18:43053487-43053190 (view UCSC Genome Browser custom track) | 
| Alignm length: | 301 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 252, 19 | 
| Conread position: | 186-667 | 
| Cow position: | chr18:42985587-42985106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 335, 324 | 
| Conread position: | 186-667 | 
| Cow position: | chr18:43167513-43167994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 202, 175 | 
| Conread position: | 186-667 | 
| Cow position: | chr18:52012468-52011989 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 254, 20 | 
| Conread position: | 189-667 | 
| Cow position: | chr18:22634534-22635010 (view UCSC Genome Browser custom track) | 
| Alignm length: | 484 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 41, 82 | 
| Conread position: | 190-667 | 
| Cow position: | chr18:40074916-40075393 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 151, 156 | 
| Conread position: | 194-667 | 
| Cow position: | chr18:42827385-42827858 (view UCSC Genome Browser custom track) | 
| Alignm length: | 475 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 316, 323 | 
| Conread position: | 195-667 | 
| Cow position: | chr18:50245723-50246195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 477 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 37, 30 | 
| Conread position: | 196-666 | 
| Cow position: | chr18:14454037-14453567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 474 | 
| Alignm identity: | 313 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 70 | 
| Conread position: | 204-667 | 
| Cow position: | chr18:42790871-42791334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 466 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 317, 327 | 
| Conread position: | 205-646 | 
| Cow position: | chr18:14453296-14452855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 63 | 
| Conread position: | 205-667 | 
| Cow position: | chr18:55523300-55523762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 296 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 69, 61 | 
| Conread position: | 206-508 | 
| Cow position: | chr18:51882790-51883098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 147, 129 | 
| Conread position: | 206-667 | 
| Cow position: | chr18:53525685-53526146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 394, 383 | 
| Conread position: | 212-663 | 
| Cow position: | chr18:51971303-51971744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 38, 12 | 
| Conread position: | 213-653 | 
| Cow position: | chr18:51838786-51838351 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 40, 32 | 
| Conread position: | 215-667 | 
| Cow position: | chr18:56330185-56329733 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 372, 389 | 
| Conread position: | 216-667 | 
| Cow position: | chr18:40306171-40306623 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 130 | 
| Conread position: | 217-524 | 
| Cow position: | chr18:51873704-51874011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 309 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 35, 44 | 
| Conread position: | 219-667 | 
| Cow position: | chr18:33093100-33092652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 134 | 
| Conread position: | 219-667 | 
| Cow position: | chr18:51752409-51751965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 59, 7 | 
| Conread position: | 222-667 | 
| Cow position: | chr18:51789884-51789439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 47 | 
| Conread position: | 222-667 | 
| Cow position: | chr18:51813043-51812598 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 47 | 
| Conread position: | 225-667 | 
| Cow position: | chr18:51839549-51839107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 445 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 221, 205 | 
| Conread position: | 227-667 | 
| Cow position: | chr18:54966881-54967321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 5e-25 | 
| Alignm gaps (pig, cow): | 171, 144 | 
| Conread position: | 228-667 | 
| Cow position: | chr18:53636113-53635674 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 6e-36 | 
| Alignm gaps (pig, cow): | 379, 362 | 
| Conread position: | 231-667 | 
| Cow position: | chr18:51400298-51400734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 21, 34 | 
| Conread position: | 235-507 | 
| Cow position: | chr18:51968964-51969233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 97, 51 | 
| Conread position: | 238-667 | 
| Cow position: | chr18:54979417-54979846 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 374, 342 | 
| Conread position: | 238-667 | 
| Cow position: | chr18:54992677-54993106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 432 | 
| Alignm identity: | 257 | 
| Alignm E-value: | 6e-26 | 
| Alignm gaps (pig, cow): | 200, 182 | 
| Conread position: | 259-667 | 
| Cow position: | chr18:41949383-41948978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 410 | 
| Alignm identity: | 274 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 339, 10 | 
| Conread position: | 264-663 | 
| Cow position: | chr18:51368803-51368404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 4e-32 | 
| Alignm gaps (pig, cow): | 74, 61 | 
| Conread position: | 271-667 | 
| Cow position: | chr18:52427523-52427919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 64, 78 | 
| Conread position: | 271-667 | 
| Cow position: | chr18:52432872-52433268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 64, 78 | 
| Conread position: | 272-639 | 
| Cow position: | chr18:50059732-50059365 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 9e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 278-667 | 
| Cow position: | chr18:40086955-40086570 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 247 | 
| Alignm E-value: | 6e-37 | 
| Alignm gaps (pig, cow): | 175, 0 | 
| Conread position: | 280-667 | 
| Cow position: | chr18:14454037-14453650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 255 | 
| Alignm E-value: | 8.99998e-41 | 
| Alignm gaps (pig, cow): | 151, 168 | 
| Conread position: | 285-665 | 
| Cow position: | chr18:42694146-42693764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 35, 247 | 
| Conread position: | 285-667 | 
| Cow position: | chr18:50022586-50022201 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 47, 75 | 
| Conread position: | 290-667 | 
| Cow position: | chr18:55067117-55066740 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 60, 74 | 
| Conread position: | 291-667 | 
| Cow position: | chr18:14453294-14452918 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 63 | 
| Conread position: | 292-563 | 
| Cow position: | chr18:43053464-43053193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 274 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 154, 137 | 
| Conread position: | 294-633 | 
| Cow position: | chr18:56248239-56247907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 344 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 57, 7 | 
| Conread position: | 300-665 | 
| Cow position: | chr18:56128040-56128405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 226 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 35, 56 | 
| Conread position: | 300-667 | 
| Cow position: | chr18:53636125-53635758 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 42, 60 | 
| Conread position: | 304-663 | 
| Cow position: | chr18:51789967-51789611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 1e-22 | 
| Alignm gaps (pig, cow): | 61, 53 | 
| Conread position: | 316-663 | 
| Cow position: | chr18:51813114-51812770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 65, 0 | 
| Conread position: | 348-663 | 
| Cow position: | chr18:40086969-40086657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 318 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 88, 79 | 
| Conread position: | 375-635 | 
| Cow position: | chr18:51970334-51970592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 263 | 
| Alignm identity: | 176 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 123, 39 | 
| Conread position: | 375-667 | 
| Cow position: | chr18:43048734-43048442 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 212 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 52 | 
| Conread position: | 383-667 | 
| Cow position: | chr18:40306170-40306455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 289 | 
| Alignm identity: | 183 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 10, 66 | 
| Conread position: | 384-647 | 
| Cow position: | chr18:43053456-43053193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 264 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 385-655 | 
| Cow position: | chr18:51873704-51873974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 272 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 216, 210 | 
| Conread position: | 446-667 | 
| Cow position: | chr18:51970321-51970541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 222 | 
| Alignm identity: | 147 | 
| Alignm E-value: | 5e-24 | 
| Alignm gaps (pig, cow): | 73, 0 | 
| Conread position: | 452-663 | 
| Cow position: | chr18:43048741-43048530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 212 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 470-666 | 
| Cow position: | chr18:33093101-33092905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 134 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 126, 138 | 
| Conread position: | 514-667 | 
| Cow position: | chr18:44184921-44184768 (view UCSC Genome Browser custom track) | 
| Alignm length: | 154 | 
| Alignm identity: | 110 | 
| Alignm E-value: | 4e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-303 | 
| Cow position: | chr19:23614816-23615118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 87, 82 | 
| Conread position: | 1-333 | 
| Cow position: | chr19:43570016-43569688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 283, 0 | 
| Conread position: | 1-629 | 
| Cow position: | chr19:23614480-23615108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 606, 602 | 
| Conread position: | 1-639 | 
| Cow position: | chr19:14959933-14959311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 93 | 
| Conread position: | 1-667 | 
| Cow position: | chr19:23614312-23614978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 621 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 2-667 | 
| Cow position: | chr19:23613977-23614642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 485 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 18, 13 | 
| Conread position: | 3-667 | 
| Cow position: | chr19:23613895-23614558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 357, 10 | 
| Conread position: | 4-667 | 
| Cow position: | chr19:23613812-23614474 (view UCSC Genome Browser custom track) | 
| Alignm length: | 666 | 
| Alignm identity: | 457 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 438, 8 | 
| Conread position: | 9-400 | 
| Cow position: | chr19:14940624-14941015 (view UCSC Genome Browser custom track) | 
| Alignm length: | 395 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 103 | 
| Conread position: | 9-435 | 
| Cow position: | chr19:14948418-14947992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 429 | 
| Alignm identity: | 286 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 341, 14 | 
| Conread position: | 9-666 | 
| Cow position: | chr19:23613732-23614389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 467 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 262, 254 | 
| Conread position: | 9-667 | 
| Cow position: | chr19:14940036-14940694 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 102 | 
| Conread position: | 9-667 | 
| Cow position: | chr19:14940288-14940946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 17 | 
| Conread position: | 9-667 | 
| Cow position: | chr19:14960427-14959773 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 83 | 
| Conread position: | 11-423 | 
| Cow position: | chr19:20678337-20678746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 269, 257 | 
| Conread position: | 11-555 | 
| Cow position: | chr19:23614574-23615118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 78 | 
| Conread position: | 12-286 | 
| Cow position: | chr19:14940795-14941069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 178 | 
| Alignm E-value: | 6e-27 | 
| Alignm gaps (pig, cow): | 268, 258 | 
| Conread position: | 12-523 | 
| Cow position: | chr19:43570173-43569666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 165 | 
| Conread position: | 12-563 | 
| Cow position: | chr19:20635496-20634950 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 352, 5 | 
| Conread position: | 12-563 | 
| Cow position: | chr19:20678254-20678802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 80 | 
| Conread position: | 12-659 | 
| Cow position: | chr19:14960340-14959700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 87 | 
| Conread position: | 12-661 | 
| Cow position: | chr19:14940375-14941024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 83 | 
| Conread position: | 12-667 | 
| Cow position: | chr19:14959602-14958962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 162 | 
| Conread position: | 12-667 | 
| Cow position: | chr19:20677666-20678321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 83, 98 | 
| Conread position: | 12-667 | 
| Cow position: | chr19:20677836-20678489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 423, 5 | 
| Conread position: | 12-667 | 
| Cow position: | chr19:23614155-23614810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 94, 77 | 
| Conread position: | 12-667 | 
| Cow position: | chr19:23649437-23650092 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 170, 162 | 
| Conread position: | 13-502 | 
| Cow position: | chr19:23649943-23650432 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 10 | 
| Conread position: | 13-667 | 
| Cow position: | chr19:23614072-23614726 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 593, 570 | 
| Conread position: | 15-340 | 
| Cow position: | chr19:23650112-23650437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 326 | 
| Alignm identity: | 213 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 15-667 | 
| Cow position: | chr19:23613571-23614222 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 423, 9 | 
| Conread position: | 15-667 | 
| Cow position: | chr19:23649608-23650260 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 495, 506 | 
| Conread position: | 16-667 | 
| Cow position: | chr19:14939960-14940610 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 348, 14 | 
| Conread position: | 17-667 | 
| Cow position: | chr19:23614413-23615062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 144, 7 | 
| Conread position: | 18-667 | 
| Cow position: | chr19:23597005-23597651 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 28 | 
| Conread position: | 21-584 | 
| Cow position: | chr19:14915858-14916413 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 41, 70 | 
| Conread position: | 21-655 | 
| Cow position: | chr19:43570322-43569700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 44 | 
| Conread position: | 21-667 | 
| Cow position: | chr19:20677927-20678573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 71 | 
| Conread position: | 22-446 | 
| Cow position: | chr19:14916024-14916443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 264 | 
| Alignm E-value: | 8e-29 | 
| Alignm gaps (pig, cow): | 276, 105 | 
| Conread position: | 24-667 | 
| Cow position: | chr19:23649281-23649924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 317, 330 | 
| Conread position: | 26-405 | 
| Cow position: | chr19:23597346-23597725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 381 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 307, 314 | 
| Conread position: | 26-482 | 
| Cow position: | chr19:23597262-23597718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 67 | 
| Conread position: | 26-634 | 
| Cow position: | chr19:23649871-23650479 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 131, 124 | 
| Conread position: | 26-667 | 
| Cow position: | chr19:14959670-14959046 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 19 | 
| Conread position: | 26-667 | 
| Cow position: | chr19:20677596-20678237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 66 | 
| Conread position: | 26-667 | 
| Cow position: | chr19:20678100-20678738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 79 | 
| Conread position: | 26-667 | 
| Cow position: | chr19:23613413-23614054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 581, 567 | 
| Conread position: | 26-667 | 
| Cow position: | chr19:23613497-23614138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 156 | 
| Conread position: | 27-523 | 
| Cow position: | chr19:14940558-14941054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 78 | 
| Conread position: | 27-585 | 
| Cow position: | chr19:43570242-43569688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 66 | 
| Conread position: | 27-638 | 
| Cow position: | chr19:14959419-14958823 (view UCSC Genome Browser custom track) | 
| Alignm length: | 615 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 499, 114 | 
| Conread position: | 27-645 | 
| Cow position: | chr19:23597095-23597713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 54, 67 | 
| Conread position: | 27-647 | 
| Cow position: | chr19:23649788-23650408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 160 | 
| Conread position: | 27-661 | 
| Cow position: | chr19:14940222-14940856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 307, 319 | 
| Conread position: | 27-661 | 
| Cow position: | chr19:23649704-23650338 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 141 | 
| Conread position: | 27-665 | 
| Cow position: | chr19:23613666-23614304 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 470 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 85 | 
| Conread position: | 27-667 | 
| Cow position: | chr19:14940138-14940778 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 436 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 410, 404 | 
| Conread position: | 27-667 | 
| Cow position: | chr19:20677513-20678153 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 65 | 
| Conread position: | 28-647 | 
| Cow position: | chr19:43570398-43569790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 231, 5 | 
| Conread position: | 32-652 | 
| Cow position: | chr19:20635646-20635026 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 71 | 
| Conread position: | 38-667 | 
| Cow position: | chr19:20677440-20678069 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 388, 403 | 
| Conread position: | 39-574 | 
| Cow position: | chr19:20635555-20635020 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 409, 391 | 
| Conread position: | 47-667 | 
| Cow position: | chr19:23613350-23613970 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 56, 48 | 
| Conread position: | 115-585 | 
| Cow position: | chr19:14948480-14948011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 322, 80 | 
| Conread position: | 119-667 | 
| Cow position: | chr19:43570392-43569854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 549 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 114, 0 | 
| Conread position: | 125-667 | 
| Cow position: | chr19:20677359-20677901 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 310, 301 | 
| Conread position: | 151-667 | 
| Cow position: | chr19:43570606-43570106 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 5e-35 | 
| Alignm gaps (pig, cow): | 30, 10 | 
| Conread position: | 152-558 | 
| Cow position: | chr19:14959712-14959308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 409 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 8e-39 | 
| Alignm gaps (pig, cow): | 183, 61 | 
| Conread position: | 156-664 | 
| Cow position: | chr19:14960448-14959942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 510 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 281, 275 | 
| Conread position: | 180-667 | 
| Cow position: | chr19:20635750-20635263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 35, 49 | 
| Conread position: | 180-667 | 
| Cow position: | chr19:23613315-23613802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 166 | 
| Conread position: | 183-667 | 
| Cow position: | chr19:23596833-23597315 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 16, 83 | 
| Conread position: | 205-667 | 
| Cow position: | chr19:20635641-20635179 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 141 | 
| Conread position: | 213-667 | 
| Cow position: | chr19:14960475-14960023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 42 | 
| Conread position: | 279-667 | 
| Cow position: | chr19:14948484-14948097 (view UCSC Genome Browser custom track) | 
| Alignm length: | 389 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 0 | 
| Conread position: | 1-639 | 
| Cow position: | chr2:78755706-78756343 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 99 | 
| Conread position: | 1-665 | 
| Cow position: | chr2:82799564-82800228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 82 | 
| Conread position: | 1-666 | 
| Cow position: | chr2:78754300-78754947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 432, 143 | 
| Conread position: | 1-667 | 
| Cow position: | chr2:78754954-78755618 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 340, 355 | 
| Conread position: | 3-667 | 
| Cow position: | chr2:78754872-78755534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 465, 0 | 
| Conread position: | 4-667 | 
| Cow position: | chr2:82799651-82800314 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 420, 410 | 
| Conread position: | 12-633 | 
| Cow position: | chr2:82799827-82800448 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 399, 409 | 
| Conread position: | 12-647 | 
| Cow position: | chr2:86465483-86466118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 5e-21 | 
| Alignm gaps (pig, cow): | 156, 171 | 
| Conread position: | 12-667 | 
| Cow position: | chr2:82799491-82800146 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 80 | 
| Conread position: | 16-667 | 
| Cow position: | chr2:78755639-78756289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 655 | 
| Alignm identity: | 394 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 408, 28 | 
| Conread position: | 23-647 | 
| Cow position: | chr2:78755479-78756101 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 312, 34 | 
| Conread position: | 25-600 | 
| Cow position: | chr2:86465328-86465902 (view UCSC Genome Browser custom track) | 
| Alignm length: | 583 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 1.99993e-41 | 
| Alignm gaps (pig, cow): | 61, 68 | 
| Conread position: | 26-339 | 
| Cow position: | chr2:48689478-48689166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 197 | 
| Alignm E-value: | 3e-25 | 
| Alignm gaps (pig, cow): | 222, 85 | 
| Conread position: | 26-667 | 
| Cow position: | chr2:78754811-78755451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 526, 0 | 
| Conread position: | 26-667 | 
| Cow position: | chr2:78755231-78755868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 583, 112 | 
| Conread position: | 27-667 | 
| Cow position: | chr2:82799758-82800398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 253, 243 | 
| Conread position: | 30-343 | 
| Cow position: | chr2:48689391-48689077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 316 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 6e-22 | 
| Alignm gaps (pig, cow): | 231, 241 | 
| Conread position: | 32-508 | 
| Cow position: | chr2:86465671-86466147 (view UCSC Genome Browser custom track) | 
| Alignm length: | 482 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 7e-24 | 
| Alignm gaps (pig, cow): | 219, 239 | 
| Conread position: | 33-667 | 
| Cow position: | chr2:86465252-86465886 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 1.99965e-42 | 
| Alignm gaps (pig, cow): | 148, 135 | 
| Conread position: | 35-667 | 
| Cow position: | chr2:78754166-78754792 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 310, 277 | 
| Conread position: | 58-665 | 
| Cow position: | chr2:82799453-82800060 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 124, 117 | 
| Conread position: | 100-667 | 
| Cow position: | chr2:86464983-86465550 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 3e-36 | 
| Alignm gaps (pig, cow): | 116, 127 | 
| Conread position: | 113-667 | 
| Cow position: | chr2:78754160-78754711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 281, 0 | 
| Conread position: | 134-501 | 
| Cow position: | chr2:48689539-48689171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 1e-29 | 
| Alignm gaps (pig, cow): | 11, 44 | 
| Conread position: | 147-667 | 
| Cow position: | chr2:82799458-82799978 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 300-667 | 
| Cow position: | chr2:48689540-48689174 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 57, 45 | 
| Conread position: | 310-667 | 
| Cow position: | chr2:82799453-82799810 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-37 | 
| Alignm gaps (pig, cow): | 127, 118 | 
| Conread position: | 22-555 | 
| Cow position: | chr21:34223077-34222542 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 395, 399 | 
| Conread position: | 26-474 | 
| Cow position: | chr21:34222989-34222541 (view UCSC Genome Browser custom track) | 
| Alignm length: | 453 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 8.00001e-41 | 
| Alignm gaps (pig, cow): | 94, 80 | 
| Conread position: | 27-543 | 
| Cow position: | chr21:12608446-12607932 (view UCSC Genome Browser custom track) | 
| Alignm length: | 521 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 71, 60 | 
| Conread position: | 27-562 | 
| Cow position: | chr21:12659232-12659767 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 51, 58 | 
| Conread position: | 33-667 | 
| Cow position: | chr21:12608860-12608226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 360 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 195-667 | 
| Cow position: | chr21:34223153-34222684 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 307 | 
| Alignm E-value: | 4.06377e-44 | 
| Alignm gaps (pig, cow): | 45, 41 | 
| Conread position: | 216-667 | 
| Cow position: | chr21:34223051-34222600 (view UCSC Genome Browser custom track) | 
| Alignm length: | 457 | 
| Alignm identity: | 289 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 232, 215 | 
| Conread position: | 1-392 | 
| Cow position: | chr22:11641064-11641455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 394 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 102, 94 | 
| Conread position: | 1-637 | 
| Cow position: | chr22:12385546-12384908 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 174 | 
| Conread position: | 1-667 | 
| Cow position: | chr22:12458652-12457988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 586, 19 | 
| Conread position: | 1-667 | 
| Cow position: | chr22:12476011-12475349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 670 | 
| Alignm identity: | 462 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 183, 14 | 
| Conread position: | 8-309 | 
| Cow position: | chr22:12475588-12475287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 303 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 153, 159 | 
| Conread position: | 8-309 | 
| Cow position: | chr22:12499671-12499972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 304 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 82, 95 | 
| Conread position: | 8-584 | 
| Cow position: | chr22:11640819-11641395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 499, 513 | 
| Conread position: | 8-584 | 
| Cow position: | chr22:12399379-12398803 (view UCSC Genome Browser custom track) | 
| Alignm length: | 580 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 179, 164 | 
| Conread position: | 9-477 | 
| Cow position: | chr22:12475755-12475287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 472 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 236 | 
| Conread position: | 9-639 | 
| Cow position: | chr22:12458394-12457764 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 347, 335 | 
| Conread position: | 12-317 | 
| Cow position: | chr22:12418810-12418505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 306 | 
| Alignm identity: | 200 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-473 | 
| Cow position: | chr22:12458223-12457762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 464 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 87 | 
| Conread position: | 12-524 | 
| Cow position: | chr22:12431103-12430591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 153, 160 | 
| Conread position: | 12-585 | 
| Cow position: | chr22:14468108-14468680 (view UCSC Genome Browser custom track) | 
| Alignm length: | 581 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 2e-38 | 
| Alignm gaps (pig, cow): | 150, 165 | 
| Conread position: | 12-652 | 
| Cow position: | chr22:14441925-14442565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 4e-34 | 
| Alignm gaps (pig, cow): | 82, 100 | 
| Conread position: | 12-667 | 
| Cow position: | chr22:12399627-12398972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 465 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 324, 334 | 
| Conread position: | 12-667 | 
| Cow position: | chr22:12476088-12475433 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 451 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 435, 419 | 
| Conread position: | 12-667 | 
| Cow position: | chr22:12476340-12475685 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 166 | 
| Conread position: | 12-667 | 
| Cow position: | chr22:12498919-12499574 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 166 | 
| Conread position: | 13-667 | 
| Cow position: | chr22:12399542-12398888 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 588, 582 | 
| Conread position: | 13-667 | 
| Cow position: | chr22:12458558-12457904 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 590, 586 | 
| Conread position: | 16-505 | 
| Cow position: | chr22:12418974-12418485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 422, 415 | 
| Conread position: | 16-508 | 
| Cow position: | chr22:11640912-11641403 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 11 | 
| Conread position: | 16-663 | 
| Cow position: | chr22:12431267-12430620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 146, 153 | 
| Conread position: | 16-667 | 
| Cow position: | chr22:12431519-12430868 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 581, 589 | 
| Conread position: | 16-667 | 
| Cow position: | chr22:12432107-12431456 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 262, 252 | 
| Conread position: | 17-639 | 
| Cow position: | chr22:46654068-46654689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 9 | 
| Conread position: | 21-221 | 
| Cow position: | chr22:12398946-12398746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 21-465 | 
| Cow position: | chr22:12399198-12398754 (view UCSC Genome Browser custom track) | 
| Alignm length: | 447 | 
| Alignm identity: | 302 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 320, 329 | 
| Conread position: | 21-561 | 
| Cow position: | chr22:12499432-12499972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 161, 153 | 
| Conread position: | 23-632 | 
| Cow position: | chr22:12431176-12430567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 611 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 564, 578 | 
| Conread position: | 23-654 | 
| Cow position: | chr22:12419152-12418504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 574 | 
| Conread position: | 23-667 | 
| Cow position: | chr22:12458464-12457820 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 559, 578 | 
| Conread position: | 23-667 | 
| Cow position: | chr22:12499014-12499658 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 150 | 
| Conread position: | 24-385 | 
| Cow position: | chr22:12430923-12430562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 362 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 24-559 | 
| Cow position: | chr22:46654326-46654863 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 68 | 
| Conread position: | 24-662 | 
| Cow position: | chr22:12431343-12430705 (view UCSC Genome Browser custom track) | 
| Alignm length: | 640 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 573, 581 | 
| Conread position: | 24-664 | 
| Cow position: | chr22:46654158-46654798 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 68 | 
| Conread position: | 24-667 | 
| Cow position: | chr22:12431427-12430784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 239 | 
| Conread position: | 25-667 | 
| Cow position: | chr22:12431594-12430952 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 74 | 
| Conread position: | 25-667 | 
| Cow position: | chr22:12431846-12431204 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 184, 179 | 
| Conread position: | 25-667 | 
| Cow position: | chr22:12432182-12431540 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 136, 142 | 
| Conread position: | 26-524 | 
| Cow position: | chr22:12399277-12398779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 245 | 
| Conread position: | 26-561 | 
| Cow position: | chr22:12475822-12475287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 158, 149 | 
| Conread position: | 26-653 | 
| Cow position: | chr22:14430297-14430924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 79 | 
| Conread position: | 26-663 | 
| Cow position: | chr22:12385689-12385050 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 25, 19 | 
| Conread position: | 26-667 | 
| Cow position: | chr22:12399781-12399140 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 64 | 
| Conread position: | 26-667 | 
| Cow position: | chr22:12476158-12475517 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 182, 176 | 
| Conread position: | 26-667 | 
| Cow position: | chr22:12476410-12475769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 239 | 
| Conread position: | 26-667 | 
| Cow position: | chr22:12498849-12499490 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 223, 239 | 
| Conread position: | 26-667 | 
| Cow position: | chr22:12499101-12499742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 160, 148 | 
| Conread position: | 27-305 | 
| Cow position: | chr22:12399024-12398746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 281 | 
| Alignm identity: | 185 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 134, 140 | 
| Conread position: | 27-392 | 
| Cow position: | chr22:11701333-11701700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 370 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 133, 150 | 
| Conread position: | 27-421 | 
| Cow position: | chr22:11666511-11666905 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 82, 68 | 
| Conread position: | 27-476 | 
| Cow position: | chr22:11641006-11641455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 285 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 155, 146 | 
| Conread position: | 27-512 | 
| Cow position: | chr22:11701165-11701650 (view UCSC Genome Browser custom track) | 
| Alignm length: | 490 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 82, 68 | 
| Conread position: | 27-554 | 
| Cow position: | chr22:12385436-12384907 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 28, 150 | 
| Conread position: | 27-557 | 
| Cow position: | chr22:12458292-12457762 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 244 | 
| Conread position: | 27-645 | 
| Cow position: | chr22:12475905-12475287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 68 | 
| Conread position: | 27-645 | 
| Cow position: | chr22:12499354-12499972 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 68 | 
| Conread position: | 27-663 | 
| Cow position: | chr22:12544645-12545281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 200, 187 | 
| Conread position: | 27-664 | 
| Cow position: | chr22:12431928-12431291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 65 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:11640670-11641310 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 17 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:11640754-11641394 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 417, 404 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:12385604-12384962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 50 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:12399696-12399056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 228, 238 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:12431676-12431036 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 146 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:12431760-12431120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 142 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:12432012-12431372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 115, 104 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:12432264-12431624 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 58 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:12499270-12499910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 157, 148 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:14429878-14430518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 74, 85 | 
| Conread position: | 27-667 | 
| Cow position: | chr22:14430214-14430854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 74, 85 | 
| Conread position: | 28-667 | 
| Cow position: | chr22:12419315-12418659 (view UCSC Genome Browser custom track) | 
| Alignm length: | 658 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 147 | 
| Conread position: | 32-585 | 
| Cow position: | chr22:14468044-14468597 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 220, 234 | 
| Conread position: | 32-667 | 
| Cow position: | chr22:14429967-14430602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 80 | 
| Conread position: | 33-667 | 
| Cow position: | chr22:14429800-14430434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 128, 134 | 
| Conread position: | 34-580 | 
| Cow position: | chr22:14430473-14431012 (view UCSC Genome Browser custom track) | 
| Alignm length: | 552 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 61, 74 | 
| Conread position: | 34-667 | 
| Cow position: | chr22:12432341-12431708 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 61, 76 | 
| Conread position: | 36-667 | 
| Cow position: | chr22:46654002-46654633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 56 | 
| Conread position: | 42-667 | 
| Cow position: | chr22:14429641-14430266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 69, 63 | 
| Conread position: | 45-667 | 
| Cow position: | chr22:12432498-12431876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 547, 557 | 
| Conread position: | 51-667 | 
| Cow position: | chr22:12399918-12399308 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 59, 44 | 
| Conread position: | 57-667 | 
| Cow position: | chr22:11640616-11641226 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 396 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 42 | 
| Conread position: | 101-667 | 
| Cow position: | chr22:12476419-12475853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 81, 72 | 
| Conread position: | 103-667 | 
| Cow position: | chr22:14467948-14468511 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 357 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 8 | 
| Conread position: | 105-667 | 
| Cow position: | chr22:14441934-14442496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 567 | 
| Alignm identity: | 341 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 252, 268 | 
| Conread position: | 110-512 | 
| Cow position: | chr22:11666510-11666912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 69 | 
| Conread position: | 110-585 | 
| Cow position: | chr22:11701164-11701639 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 162, 149 | 
| Conread position: | 111-638 | 
| Cow position: | chr22:14442192-14442716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 314, 332 | 
| Conread position: | 120-667 | 
| Cow position: | chr22:14429803-14430350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 363 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 143 | 
| Conread position: | 128-644 | 
| Cow position: | chr22:11666444-11666960 (view UCSC Genome Browser custom track) | 
| Alignm length: | 523 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 137, 129 | 
| Conread position: | 129-667 | 
| Cow position: | chr22:11701099-11701637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 138, 128 | 
| Conread position: | 134-598 | 
| Cow position: | chr22:14442299-14442759 (view UCSC Genome Browser custom track) | 
| Alignm length: | 468 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 7e-29 | 
| Alignm gaps (pig, cow): | 123, 137 | 
| Conread position: | 210-422 | 
| Cow position: | chr22:12545641-12545852 (view UCSC Genome Browser custom track) | 
| Alignm length: | 214 | 
| Alignm identity: | 142 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 124, 133 | 
| Conread position: | 225-667 | 
| Cow position: | chr22:11666457-11666899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 40 | 
| Conread position: | 308-667 | 
| Cow position: | chr22:11666456-11666815 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 7e-40 | 
| Alignm gaps (pig, cow): | 117, 131 | 
| Conread position: | 348-585 | 
| Cow position: | chr22:12419331-12419094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 238 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 423-667 | 
| Cow position: | chr22:12385712-12385468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 246 | 
| Alignm identity: | 160 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 41, 47 | 
| Conread position: | 445-667 | 
| Cow position: | chr22:12419318-12419096 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 6e-28 | 
| Alignm gaps (pig, cow): | 157, 150 | 
| Conread position: | 1-239 | 
| Cow position: | chr23:24626514-24626750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 240 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 17, 25 | 
| Conread position: | 1-305 | 
| Cow position: | chr23:24560432-24560128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 305 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-515 | 
| Cow position: | chr23:25698617-25698103 (view UCSC Genome Browser custom track) | 
| Alignm length: | 519 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 18, 7 | 
| Conread position: | 1-556 | 
| Cow position: | chr23:24547208-24546653 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 19, 15 | 
| Conread position: | 7-667 | 
| Cow position: | chr23:24639260-24639920 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 171 | 
| Conread position: | 8-354 | 
| Cow position: | chr23:25626744-25627091 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 86, 79 | 
| Conread position: | 9-472 | 
| Cow position: | chr23:24535915-24535452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 166 | 
| Conread position: | 9-585 | 
| Cow position: | chr23:24522771-24522198 (view UCSC Genome Browser custom track) | 
| Alignm length: | 582 | 
| Alignm identity: | 372 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 101 | 
| Conread position: | 10-504 | 
| Cow position: | chr23:24522171-24521689 (view UCSC Genome Browser custom track) | 
| Alignm length: | 497 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 9, 201 | 
| Conread position: | 12-370 | 
| Cow position: | chr23:24654082-24654439 (view UCSC Genome Browser custom track) | 
| Alignm length: | 360 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 87, 81 | 
| Conread position: | 12-389 | 
| Cow position: | chr23:24560505-24560128 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-427 | 
| Cow position: | chr23:25660284-25660699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 418 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 108, 83 | 
| Conread position: | 12-665 | 
| Cow position: | chr23:24522519-24521864 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 169, 163 | 
| Conread position: | 12-667 | 
| Cow position: | chr23:24639349-24640004 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 40 | 
| Conread position: | 13-427 | 
| Cow position: | chr23:24522602-24522188 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 27, 20 | 
| Conread position: | 17-667 | 
| Cow position: | chr23:25626253-25626899 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 588, 6 | 
| Conread position: | 22-585 | 
| Cow position: | chr23:25698681-25698118 (view UCSC Genome Browser custom track) | 
| Alignm length: | 568 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 90, 66 | 
| Conread position: | 22-667 | 
| Cow position: | chr23:25626005-25626647 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 67, 74 | 
| Conread position: | 25-628 | 
| Cow position: | chr23:24522338-24521732 (view UCSC Genome Browser custom track) | 
| Alignm length: | 620 | 
| Alignm identity: | 378 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 149, 340 | 
| Conread position: | 26-323 | 
| Cow position: | chr23:24626455-24626750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 298 | 
| Alignm identity: | 202 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 267, 0 | 
| Conread position: | 26-409 | 
| Cow position: | chr23:25626678-25627062 (view UCSC Genome Browser custom track) | 
| Alignm length: | 386 | 
| Alignm identity: | 254 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 67 | 
| Conread position: | 26-460 | 
| Cow position: | chr23:25698509-25698075 (view UCSC Genome Browser custom track) | 
| Alignm length: | 439 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 51, 79 | 
| Conread position: | 26-485 | 
| Cow position: | chr23:24639615-24640074 (view UCSC Genome Browser custom track) | 
| Alignm length: | 460 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-508 | 
| Cow position: | chr23:24522670-24522191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 305 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 0 | 
| Conread position: | 26-628 | 
| Cow position: | chr23:24547267-24546665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 606 | 
| Alignm identity: | 395 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 67 | 
| Conread position: | 26-637 | 
| Cow position: | chr23:25626429-25627037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 613 | 
| Alignm identity: | 386 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 575, 149 | 
| Conread position: | 27-286 | 
| Cow position: | chr23:25723979-25723720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 261 | 
| Alignm identity: | 168 | 
| Alignm E-value: | 1e-24 | 
| Alignm gaps (pig, cow): | 253, 247 | 
| Conread position: | 27-338 | 
| Cow position: | chr23:24639784-24640095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 312 | 
| Alignm identity: | 201 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-403 | 
| Cow position: | chr23:24626372-24626746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 378 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 62 | 
| Conread position: | 27-473 | 
| Cow position: | chr23:25626595-25627041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 146 | 
| Conread position: | 27-558 | 
| Cow position: | chr23:25660215-25660746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 159, 152 | 
| Conread position: | 27-641 | 
| Cow position: | chr23:24560658-24560042 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 532, 547 | 
| Conread position: | 27-658 | 
| Cow position: | chr23:24639448-24640079 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 151 | 
| Conread position: | 27-665 | 
| Cow position: | chr23:25626346-25626981 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 490, 240 | 
| Conread position: | 27-667 | 
| Cow position: | chr23:24560910-24560270 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 66 | 
| Conread position: | 28-667 | 
| Cow position: | chr23:24639197-24639836 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 230 | 
| Conread position: | 29-667 | 
| Cow position: | chr23:25625929-25626566 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 13 | 
| Conread position: | 32-524 | 
| Cow position: | chr23:24535976-24535484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 495 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 211, 224 | 
| Conread position: | 32-667 | 
| Cow position: | chr23:24560821-24560186 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 42-485 | 
| Cow position: | chr23:24626303-24626744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 295 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 422, 0 | 
| Conread position: | 42-633 | 
| Cow position: | chr23:25660146-25660737 (view UCSC Genome Browser custom track) | 
| Alignm length: | 594 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 221, 227 | 
| Conread position: | 46-639 | 
| Cow position: | chr23:24536046-24535453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 373 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 213, 220 | 
| Conread position: | 57-393 | 
| Cow position: | chr23:24654043-24654379 (view UCSC Genome Browser custom track) | 
| Alignm length: | 339 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 6e-40 | 
| Alignm gaps (pig, cow): | 124, 116 | 
| Conread position: | 109-557 | 
| Cow position: | chr23:25626593-25627041 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 109-667 | 
| Cow position: | chr23:25724065-25723510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 232, 237 | 
| Conread position: | 110-637 | 
| Cow position: | chr23:24560659-24560132 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 65 | 
| Conread position: | 111-664 | 
| Cow position: | chr23:25698676-25698123 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 4.2039e-45 | 
| Alignm gaps (pig, cow): | 51, 67 | 
| Conread position: | 111-667 | 
| Cow position: | chr23:24547266-24546710 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 379 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 65 | 
| Conread position: | 117-664 | 
| Cow position: | chr23:24522747-24522203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 550 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 58 | 
| Conread position: | 126-575 | 
| Cow position: | chr23:24626303-24626750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 238, 226 | 
| Conread position: | 133-658 | 
| Cow position: | chr23:24536043-24535518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 471, 457 | 
| Conread position: | 134-661 | 
| Cow position: | chr23:24547327-24546800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 47, 38 | 
| Conread position: | 134-667 | 
| Cow position: | chr23:24522812-24522284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 534 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 9.94922e-44 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 140-508 | 
| Cow position: | chr23:24654042-24654412 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 248 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 356, 0 | 
| Conread position: | 141-667 | 
| Cow position: | chr23:24639226-24639752 (view UCSC Genome Browser custom track) | 
| Alignm length: | 528 | 
| Alignm identity: | 345 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 204 | 
| Conread position: | 142-524 | 
| Cow position: | chr23:25724116-25723734 (view UCSC Genome Browser custom track) | 
| Alignm length: | 385 | 
| Alignm identity: | 256 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 40, 30 | 
| Conread position: | 142-667 | 
| Cow position: | chr23:25660162-25660687 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 349 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 103 | 
| Conread position: | 181-659 | 
| Cow position: | chr23:24626274-24626750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 30, 21 | 
| Conread position: | 186-637 | 
| Cow position: | chr23:25698685-25698234 (view UCSC Genome Browser custom track) | 
| Alignm length: | 459 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 5e-38 | 
| Alignm gaps (pig, cow): | 66, 76 | 
| Conread position: | 214-667 | 
| Cow position: | chr23:24536046-24535593 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 215-667 | 
| Cow position: | chr23:24547330-24546878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 455 | 
| Alignm identity: | 310 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 30 | 
| Conread position: | 217-667 | 
| Cow position: | chr23:24626154-24626592 (view UCSC Genome Browser custom track) | 
| Alignm length: | 452 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 162, 90 | 
| Conread position: | 225-637 | 
| Cow position: | chr23:24654043-24654455 (view UCSC Genome Browser custom track) | 
| Alignm length: | 414 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 399, 367 | 
| Conread position: | 235-628 | 
| Cow position: | chr23:25724107-25723714 (view UCSC Genome Browser custom track) | 
| Alignm length: | 397 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 16, 10 | 
| Conread position: | 288-667 | 
| Cow position: | chr23:24547341-24546962 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 263 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 57 | 
| Conread position: | 294-664 | 
| Cow position: | chr23:24626303-24626673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 245 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 294-667 | 
| Cow position: | chr23:25660146-25660519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 6e-39 | 
| Alignm gaps (pig, cow): | 228, 209 | 
| Conread position: | 308-646 | 
| Cow position: | chr23:24654042-24654380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 340 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2.99878e-43 | 
| Alignm gaps (pig, cow): | 127, 121 | 
| Conread position: | 379-667 | 
| Cow position: | chr23:25698660-25698372 (view UCSC Genome Browser custom track) | 
| Alignm length: | 292 | 
| Alignm identity: | 190 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 56, 48 | 
| Conread position: | 392-666 | 
| Cow position: | chr23:24654042-24654316 (view UCSC Genome Browser custom track) | 
| Alignm length: | 275 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 5e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 403-667 | 
| Cow position: | chr23:25724107-25723843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 267 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 24, 11 | 
| Conread position: | 476-667 | 
| Cow position: | chr23:24654042-24654233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 144 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-636 | 
| Cow position: | chr24:17070412-17071047 (view UCSC Genome Browser custom track) | 
| Alignm length: | 638 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 180, 173 | 
| Conread position: | 8-667 | 
| Cow position: | chr24:17035746-17035087 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-652 | 
| Cow position: | chr24:17035997-17035354 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 426, 419 | 
| Conread position: | 11-477 | 
| Cow position: | chr24:17070590-17071056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 467 | 
| Alignm identity: | 300 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-351 | 
| Cow position: | chr24:17013212-17013551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 91, 83 | 
| Conread position: | 12-646 | 
| Cow position: | chr24:17036414-17035780 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-652 | 
| Cow position: | chr24:17036246-17035606 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 323, 334 | 
| Conread position: | 12-661 | 
| Cow position: | chr24:17035658-17035009 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 64 | 
| Conread position: | 12-666 | 
| Cow position: | chr24:17036078-17035424 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 161 | 
| Conread position: | 16-486 | 
| Cow position: | chr24:17035402-17034933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 471 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 455, 0 | 
| Conread position: | 19-667 | 
| Cow position: | chr24:17078290-17077642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 391 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 424, 429 | 
| Conread position: | 25-667 | 
| Cow position: | chr24:17036317-17035675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 125 | 
| Conread position: | 26-549 | 
| Cow position: | chr24:17078031-17077508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 338 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 149 | 
| Conread position: | 26-561 | 
| Cow position: | chr24:17070521-17071056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-653 | 
| Cow position: | chr24:17036148-17035521 (view UCSC Genome Browser custom track) | 
| Alignm length: | 629 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 409, 402 | 
| Conread position: | 26-654 | 
| Cow position: | chr24:17035560-17034933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 141 | 
| Conread position: | 27-395 | 
| Cow position: | chr24:17070690-17071058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 369 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-638 | 
| Cow position: | chr24:17078114-17077503 (view UCSC Genome Browser custom track) | 
| Alignm length: | 614 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 416, 421 | 
| Conread position: | 27-667 | 
| Cow position: | chr24:17035895-17035255 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 148 | 
| Conread position: | 27-667 | 
| Cow position: | chr24:17036483-17035843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 217, 238 | 
| Conread position: | 31-401 | 
| Cow position: | chr24:17013147-17013516 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 360, 0 | 
| Conread position: | 42-667 | 
| Cow position: | chr24:17036551-17035927 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 292, 6 | 
| Conread position: | 72-667 | 
| Cow position: | chr24:17078153-17077558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 599 | 
| Alignm identity: | 393 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 109, 101 | 
| Conread position: | 85-358 | 
| Cow position: | chr24:16986384-16986656 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 9e-32 | 
| Alignm gaps (pig, cow): | 77, 40 | 
| Conread position: | 111-667 | 
| Cow position: | chr24:17070438-17070994 (view UCSC Genome Browser custom track) | 
| Alignm length: | 557 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 177-667 | 
| Cow position: | chr24:17070420-17070910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 491 | 
| Alignm identity: | 316 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 211-429 | 
| Cow position: | chr24:16986425-16986643 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 157 | 
| Alignm E-value: | 3e-31 | 
| Alignm gaps (pig, cow): | 125, 119 | 
| Conread position: | 215-558 | 
| Cow position: | chr24:17013165-17013506 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 228 | 
| Alignm E-value: | 2e-40 | 
| Alignm gaps (pig, cow): | 215, 15 | 
| Conread position: | 295-525 | 
| Cow position: | chr24:16986425-16986655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 233 | 
| Alignm identity: | 155 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 143, 136 | 
| Conread position: | 298-637 | 
| Cow position: | chr24:17013162-17013501 (view UCSC Genome Browser custom track) | 
| Alignm length: | 342 | 
| Alignm identity: | 229 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 141, 128 | 
| Conread position: | 312-667 | 
| Cow position: | chr24:17036615-17036263 (view UCSC Genome Browser custom track) | 
| Alignm length: | 359 | 
| Alignm identity: | 240 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 19, 28 | 
| Conread position: | 313-666 | 
| Cow position: | chr24:17070388-17070741 (view UCSC Genome Browser custom track) | 
| Alignm length: | 356 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 23 | 
| Conread position: | 385-585 | 
| Cow position: | chr24:16986431-16986631 (view UCSC Genome Browser custom track) | 
| Alignm length: | 201 | 
| Alignm identity: | 137 | 
| Alignm E-value: | 1e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 443-667 | 
| Cow position: | chr24:16986406-16986629 (view UCSC Genome Browser custom track) | 
| Alignm length: | 227 | 
| Alignm identity: | 149 | 
| Alignm E-value: | 8e-21 | 
| Alignm gaps (pig, cow): | 164, 7 | 
| Conread position: | 447-667 | 
| Cow position: | chr24:17013227-17013447 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 159 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 146, 154 | 
| Conread position: | 466-667 | 
| Cow position: | chr24:17013162-17013363 (view UCSC Genome Browser custom track) | 
| Alignm length: | 202 | 
| Alignm identity: | 133 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-293 | 
| Cow position: | chr25:366762-367054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 293 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-367 | 
| Cow position: | chr25:346485-346851 (view UCSC Genome Browser custom track) | 
| Alignm length: | 368 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 151, 155 | 
| Conread position: | 1-379 | 
| Cow position: | chr25:33127839-33128217 (view UCSC Genome Browser custom track) | 
| Alignm length: | 379 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8.99634e-43 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-663 | 
| Cow position: | chr25:34433561-34434205 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 210, 44 | 
| Conread position: | 1-667 | 
| Cow position: | chr25:33298600-33299266 (view UCSC Genome Browser custom track) | 
| Alignm length: | 671 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 265 | 
| Conread position: | 1-667 | 
| Cow position: | chr25:36800668-36801334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 88, 98 | 
| Conread position: | 6-667 | 
| Cow position: | chr25:33305676-33305039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 188, 205 | 
| Conread position: | 8-500 | 
| Cow position: | chr25:36801419-36801911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 493 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 7.00005e-41 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-505 | 
| Cow position: | chr25:33305357-33304867 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 314, 39 | 
| Conread position: | 9-526 | 
| Cow position: | chr25:23420344-23420861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 14 | 
| Conread position: | 9-536 | 
| Cow position: | chr25:34447403-34447919 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 86 | 
| Conread position: | 9-583 | 
| Cow position: | chr25:33306002-33305434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 365 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 25 | 
| Conread position: | 9-667 | 
| Cow position: | chr25:33298776-33299434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 498, 508 | 
| Conread position: | 9-667 | 
| Cow position: | chr25:33306253-33305603 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 193, 65 | 
| Conread position: | 9-667 | 
| Cow position: | chr25:33306587-33305933 (view UCSC Genome Browser custom track) | 
| Alignm length: | 670 | 
| Alignm identity: | 404 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 142, 259 | 
| Conread position: | 12-301 | 
| Cow position: | chr25:33127934-33128223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 290 | 
| Alignm identity: | 194 | 
| Alignm E-value: | 2e-37 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 12-355 | 
| Cow position: | chr25:18642207-18641861 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 133, 256 | 
| Conread position: | 12-418 | 
| Cow position: | chr25:33299451-33299853 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 270 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 328, 333 | 
| Conread position: | 12-472 | 
| Cow position: | chr25:34769656-34769196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 82 | 
| Conread position: | 12-584 | 
| Cow position: | chr25:36801339-36801911 (view UCSC Genome Browser custom track) | 
| Alignm length: | 578 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 145, 138 | 
| Conread position: | 12-643 | 
| Cow position: | chr25:33157425-33156794 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 245, 259 | 
| Conread position: | 12-664 | 
| Cow position: | chr25:34447154-34447799 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 549, 0 | 
| Conread position: | 12-667 | 
| Cow position: | chr25:33299115-33299770 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 430, 435 | 
| Conread position: | 12-667 | 
| Cow position: | chr25:36800595-36801250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 32 | 
| Conread position: | 12-667 | 
| Cow position: | chr25:36801183-36801826 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 9.80909e-45 | 
| Alignm gaps (pig, cow): | 100, 85 | 
| Conread position: | 13-667 | 
| Cow position: | chr25:33298864-33299518 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 494, 500 | 
| Conread position: | 15-306 | 
| Cow position: | chr25:326974-327265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 295 | 
| Alignm identity: | 193 | 
| Alignm E-value: | 2e-28 | 
| Alignm gaps (pig, cow): | 97, 80 | 
| Conread position: | 15-664 | 
| Cow position: | chr25:326548-327203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 70 | 
| Conread position: | 15-664 | 
| Cow position: | chr25:34732473-34731824 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 230, 256 | 
| Conread position: | 16-343 | 
| Cow position: | chr25:22235965-22236293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 330 | 
| Alignm identity: | 205 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 245, 250 | 
| Conread position: | 16-472 | 
| Cow position: | chr25:36801511-36801967 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 301 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 420, 431 | 
| Conread position: | 16-500 | 
| Cow position: | chr25:33299287-33299771 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 96, 91 | 
| Conread position: | 16-505 | 
| Cow position: | chr25:33144901-33145387 (view UCSC Genome Browser custom track) | 
| Alignm length: | 494 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 120, 110 | 
| Conread position: | 21-667 | 
| Cow position: | chr25:33298704-33299350 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 580, 561 | 
| Conread position: | 25-667 | 
| Cow position: | chr25:34770063-34769421 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 232, 241 | 
| Conread position: | 26-376 | 
| Cow position: | chr25:34714180-34714530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 221 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 50, 66 | 
| Conread position: | 26-523 | 
| Cow position: | chr25:34763224-34763718 (view UCSC Genome Browser custom track) | 
| Alignm length: | 501 | 
| Alignm identity: | 290 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 223, 233 | 
| Conread position: | 26-581 | 
| Cow position: | chr25:34762891-34763443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 200, 185 | 
| Conread position: | 26-583 | 
| Cow position: | chr25:34713928-34714485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 506, 500 | 
| Conread position: | 26-637 | 
| Cow position: | chr25:34447252-34447854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 612 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 451, 0 | 
| Conread position: | 26-667 | 
| Cow position: | chr25:25652418-25653059 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 155, 146 | 
| Conread position: | 26-667 | 
| Cow position: | chr25:33299045-33299686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 227, 219 | 
| Conread position: | 26-667 | 
| Cow position: | chr25:33299213-33299850 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 314, 320 | 
| Conread position: | 26-667 | 
| Cow position: | chr25:34769894-34769253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 567, 575 | 
| Conread position: | 26-667 | 
| Cow position: | chr25:34770146-34769505 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 399, 415 | 
| Conread position: | 27-377 | 
| Cow position: | chr25:33145077-33145429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 355 | 
| Alignm identity: | 227 | 
| Alignm E-value: | 3e-32 | 
| Alignm gaps (pig, cow): | 182, 177 | 
| Conread position: | 27-477 | 
| Cow position: | chr25:33127781-33128231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 451 | 
| Alignm identity: | 288 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 27-558 | 
| Cow position: | chr25:326728-327265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 545 | 
| Alignm identity: | 331 | 
| Alignm E-value: | 6e-30 | 
| Alignm gaps (pig, cow): | 74, 56 | 
| Conread position: | 27-583 | 
| Cow position: | chr25:25652251-25652807 (view UCSC Genome Browser custom track) | 
| Alignm length: | 558 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 236, 242 | 
| Conread position: | 27-585 | 
| Cow position: | chr25:34433668-34434211 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 330 | 
| Alignm E-value: | 5e-27 | 
| Alignm gaps (pig, cow): | 234, 0 | 
| Conread position: | 27-585 | 
| Cow position: | chr25:34732545-34731986 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 52, 70 | 
| Conread position: | 27-639 | 
| Cow position: | chr25:34769809-34769197 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 337, 326 | 
| Conread position: | 27-657 | 
| Cow position: | chr25:34447085-34447716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 635 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 60 | 
| Conread position: | 27-663 | 
| Cow position: | chr25:34769977-34769341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 431 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 155, 146 | 
| Conread position: | 27-667 | 
| Cow position: | chr25:33157494-33156854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 422 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 49, 72 | 
| Conread position: | 27-667 | 
| Cow position: | chr25:34447001-34447641 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 72 | 
| Conread position: | 27-667 | 
| Cow position: | chr25:34713845-34714485 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 382 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 224, 218 | 
| Conread position: | 27-667 | 
| Cow position: | chr25:36800526-36801166 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 55, 49 | 
| Conread position: | 31-507 | 
| Cow position: | chr25:34433003-34433497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 500 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 57, 80 | 
| Conread position: | 37-667 | 
| Cow position: | chr25:34446927-34447557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 327, 317 | 
| Conread position: | 39-667 | 
| Cow position: | chr25:33298470-33299098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 232 | 
| Conread position: | 42-664 | 
| Cow position: | chr25:34732614-34731992 (view UCSC Genome Browser custom track) | 
| Alignm length: | 627 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 143, 131 | 
| Conread position: | 44-665 | 
| Cow position: | chr25:34762825-34763443 (view UCSC Genome Browser custom track) | 
| Alignm length: | 628 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 146, 131 | 
| Conread position: | 45-638 | 
| Cow position: | chr25:33144846-33145436 (view UCSC Genome Browser custom track) | 
| Alignm length: | 596 | 
| Alignm identity: | 370 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 178, 166 | 
| Conread position: | 45-665 | 
| Cow position: | chr25:326494-327120 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 389 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 32, 40 | 
| Conread position: | 51-544 | 
| Cow position: | chr25:34714037-34714530 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 8.99634e-43 | 
| Alignm gaps (pig, cow): | 39, 26 | 
| Conread position: | 68-584 | 
| Cow position: | chr25:23420319-23420835 (view UCSC Genome Browser custom track) | 
| Alignm length: | 518 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 197, 193 | 
| Conread position: | 91-485 | 
| Cow position: | chr25:346404-346801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 40, 168 | 
| Conread position: | 102-402 | 
| Cow position: | chr25:346502-346802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 302 | 
| Alignm identity: | 186 | 
| Alignm E-value: | 3e-22 | 
| Alignm gaps (pig, cow): | 132, 138 | 
| Conread position: | 110-667 | 
| Cow position: | chr25:34713844-34714401 (view UCSC Genome Browser custom track) | 
| Alignm length: | 562 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 1e-36 | 
| Alignm gaps (pig, cow): | 179, 172 | 
| Conread position: | 111-667 | 
| Cow position: | chr25:34770145-34769589 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 64, 70 | 
| Conread position: | 114-667 | 
| Cow position: | chr25:36800445-36800998 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 58, 74 | 
| Conread position: | 114-667 | 
| Cow position: | chr25:36801357-36801910 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 473, 485 | 
| Conread position: | 119-489 | 
| Cow position: | chr25:34433511-34433878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 239 | 
| Alignm E-value: | 9e-33 | 
| Alignm gaps (pig, cow): | 245, 94 | 
| Conread position: | 119-553 | 
| Cow position: | chr25:33127789-33128223 (view UCSC Genome Browser custom track) | 
| Alignm length: | 436 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 227 | 
| Conread position: | 134-501 | 
| Cow position: | chr25:22235830-22236199 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 242 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 11, 44 | 
| Conread position: | 135-461 | 
| Cow position: | chr25:366728-367054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 329 | 
| Alignm identity: | 211 | 
| Alignm E-value: | 2e-31 | 
| Alignm gaps (pig, cow): | 114, 121 | 
| Conread position: | 135-474 | 
| Cow position: | chr25:326926-327265 (view UCSC Genome Browser custom track) | 
| Alignm length: | 348 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 21, 17 | 
| Conread position: | 135-496 | 
| Cow position: | chr25:34433023-34433402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 384 | 
| Alignm identity: | 253 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 26, 43 | 
| Conread position: | 138-578 | 
| Cow position: | chr25:34732098-34731660 (view UCSC Genome Browser custom track) | 
| Alignm length: | 446 | 
| Alignm identity: | 275 | 
| Alignm E-value: | 2e-30 | 
| Alignm gaps (pig, cow): | 24, 39 | 
| Conread position: | 138-667 | 
| Cow position: | chr25:34713703-34714233 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 14, 38 | 
| Conread position: | 139-645 | 
| Cow position: | chr25:33127725-33128231 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 215 | 
| Conread position: | 141-667 | 
| Cow position: | chr25:33144858-33145381 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 166, 154 | 
| Conread position: | 149-667 | 
| Cow position: | chr25:34446871-34447389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 49, 58 | 
| Conread position: | 152-639 | 
| Cow position: | chr25:23420319-23420806 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 435, 449 | 
| Conread position: | 159-667 | 
| Cow position: | chr25:23420173-23420666 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 34 | 
| Conread position: | 180-508 | 
| Cow position: | chr25:18642207-18641876 (view UCSC Genome Browser custom track) | 
| Alignm length: | 336 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 81, 91 | 
| Conread position: | 184-647 | 
| Cow position: | chr25:34432988-34433469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 311 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 238, 270 | 
| Conread position: | 184-667 | 
| Cow position: | chr25:33157505-33157022 (view UCSC Genome Browser custom track) | 
| Alignm length: | 487 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 39, 20 | 
| Conread position: | 184-667 | 
| Cow position: | chr25:34770156-34769673 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 81 | 
| Conread position: | 187-638 | 
| Cow position: | chr25:34433495-34433942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 279 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 163, 110 | 
| Conread position: | 213-667 | 
| Cow position: | chr25:33144846-33145297 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 171, 166 | 
| Conread position: | 215-545 | 
| Cow position: | chr25:366724-367054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 218 | 
| Alignm E-value: | 4e-36 | 
| Alignm gaps (pig, cow): | 118, 125 | 
| Conread position: | 215-570 | 
| Cow position: | chr25:346447-346802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 358 | 
| Alignm identity: | 225 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 118, 125 | 
| Conread position: | 216-500 | 
| Cow position: | chr25:414774-414496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 288 | 
| Alignm identity: | 189 | 
| Alignm E-value: | 3e-24 | 
| Alignm gaps (pig, cow): | 34, 22 | 
| Conread position: | 216-646 | 
| Cow position: | chr25:22235829-22236259 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 4e-35 | 
| Alignm gaps (pig, cow): | 53, 45 | 
| Conread position: | 219-658 | 
| Cow position: | chr25:33305399-33304965 (view UCSC Genome Browser custom track) | 
| Alignm length: | 443 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 122, 81 | 
| Conread position: | 230-667 | 
| Cow position: | chr25:33127732-33128169 (view UCSC Genome Browser custom track) | 
| Alignm length: | 440 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 125 | 
| Conread position: | 232-504 | 
| Cow position: | chr25:34432952-34433224 (view UCSC Genome Browser custom track) | 
| Alignm length: | 276 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 5e-28 | 
| Alignm gaps (pig, cow): | 104, 114 | 
| Conread position: | 236-663 | 
| Cow position: | chr25:23420319-23420746 (view UCSC Genome Browser custom track) | 
| Alignm length: | 431 | 
| Alignm identity: | 294 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 115 | 
| Conread position: | 270-629 | 
| Cow position: | chr25:366692-367054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 365 | 
| Alignm identity: | 231 | 
| Alignm E-value: | 7e-31 | 
| Alignm gaps (pig, cow): | 15, 225 | 
| Conread position: | 283-653 | 
| Cow position: | chr25:346433-346801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 233 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 203, 9 | 
| Conread position: | 294-664 | 
| Cow position: | chr25:34732614-34732244 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 1e-34 | 
| Alignm gaps (pig, cow): | 39, 52 | 
| Conread position: | 294-667 | 
| Cow position: | chr25:33127712-33128085 (view UCSC Genome Browser custom track) | 
| Alignm length: | 374 | 
| Alignm identity: | 243 | 
| Alignm E-value: | 2.94273e-44 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 300-667 | 
| Cow position: | chr25:22235829-22236196 (view UCSC Genome Browser custom track) | 
| Alignm length: | 372 | 
| Alignm identity: | 234 | 
| Alignm E-value: | 6e-29 | 
| Alignm gaps (pig, cow): | 57, 45 | 
| Conread position: | 378-667 | 
| Cow position: | chr25:34732614-34732325 (view UCSC Genome Browser custom track) | 
| Alignm length: | 291 | 
| Alignm identity: | 182 | 
| Alignm E-value: | 1e-23 | 
| Alignm gaps (pig, cow): | 39, 43 | 
| Conread position: | 383-667 | 
| Cow position: | chr25:414775-414497 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 8e-22 | 
| Alignm gaps (pig, cow): | 127, 25 | 
| Conread position: | 384-667 | 
| Cow position: | chr25:346448-346731 (view UCSC Genome Browser custom track) | 
| Alignm length: | 286 | 
| Alignm identity: | 184 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 186, 192 | 
| Conread position: | 384-667 | 
| Cow position: | chr25:366725-367008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 287 | 
| Alignm identity: | 187 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 53, 42 | 
| Conread position: | 468-663 | 
| Cow position: | chr25:34433020-34433215 (view UCSC Genome Browser custom track) | 
| Alignm length: | 198 | 
| Alignm identity: | 140 | 
| Alignm E-value: | 4e-26 | 
| Alignm gaps (pig, cow): | 29, 45 | 
| Conread position: | 9-484 | 
| Cow position: | chr27:21615894-21615420 (view UCSC Genome Browser custom track) | 
| Alignm length: | 478 | 
| Alignm identity: | 317 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 75, 84 | 
| Conread position: | 16-667 | 
| Cow position: | chr27:21616227-21615572 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 105, 7 | 
| Conread position: | 17-597 | 
| Cow position: | chr27:21615968-21615389 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 390 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 9 | 
| Conread position: | 27-667 | 
| Cow position: | chr27:21616051-21615405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 37, 75 | 
| Conread position: | 1-577 | 
| Cow position: | chr28:9290125-9290695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 579 | 
| Alignm identity: | 376 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 22 | 
| Conread position: | 1-630 | 
| Cow position: | chr28:7757789-7758418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 171, 177 | 
| Conread position: | 1-639 | 
| Cow position: | chr28:9298938-9299560 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 506, 56 | 
| Conread position: | 5-319 | 
| Cow position: | chr28:7810632-7810946 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 209 | 
| Alignm E-value: | 5e-40 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 5-661 | 
| Cow position: | chr28:9290044-9290695 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 9, 160 | 
| Conread position: | 5-667 | 
| Cow position: | chr28:9299024-9299669 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 327, 138 | 
| Conread position: | 8-433 | 
| Cow position: | chr28:9290296-9290719 (view UCSC Genome Browser custom track) | 
| Alignm length: | 427 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 6.00036e-42 | 
| Alignm gaps (pig, cow): | 146, 79 | 
| Conread position: | 8-500 | 
| Cow position: | chr28:9299265-9299750 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 1e-35 | 
| Alignm gaps (pig, cow): | 164, 170 | 
| Conread position: | 8-667 | 
| Cow position: | chr28:9298861-9299504 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 578, 126 | 
| Conread position: | 9-404 | 
| Cow position: | chr28:11333588-11333193 (view UCSC Genome Browser custom track) | 
| Alignm length: | 403 | 
| Alignm identity: | 252 | 
| Alignm E-value: | 4e-28 | 
| Alignm gaps (pig, cow): | 239, 121 | 
| Conread position: | 9-406 | 
| Cow position: | chr28:7810552-7810949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 261 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 78 | 
| Conread position: | 9-473 | 
| Cow position: | chr28:9253148-9253612 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-628 | 
| Cow position: | chr28:7757713-7758332 (view UCSC Genome Browser custom track) | 
| Alignm length: | 622 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 322, 337 | 
| Conread position: | 9-631 | 
| Cow position: | chr28:9252980-9253602 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 406 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-656 | 
| Cow position: | chr28:7810309-7810947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 577, 220 | 
| Conread position: | 9-662 | 
| Cow position: | chr28:7758217-7758854 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 355, 112 | 
| Conread position: | 9-667 | 
| Cow position: | chr28:7757461-7758119 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 498, 508 | 
| Conread position: | 9-667 | 
| Cow position: | chr28:7757545-7758203 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 592, 577 | 
| Conread position: | 9-667 | 
| Cow position: | chr28:7757629-7758287 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 331, 336 | 
| Conread position: | 9-667 | 
| Cow position: | chr28:7758049-7758691 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 397 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 591, 276 | 
| Conread position: | 12-667 | 
| Cow position: | chr28:9289967-9290617 (view UCSC Genome Browser custom track) | 
| Alignm length: | 663 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 5 | 
| Conread position: | 13-584 | 
| Cow position: | chr28:9298617-9299183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 348 | 
| Alignm E-value: | 2.8026e-45 | 
| Alignm gaps (pig, cow): | 50, 0 | 
| Conread position: | 16-430 | 
| Cow position: | chr28:7758461-7758874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 417 | 
| Alignm identity: | 258 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 146, 6 | 
| Conread position: | 21-666 | 
| Cow position: | chr28:9298707-9299335 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 580, 107 | 
| Conread position: | 23-559 | 
| Cow position: | chr28:11333910-11333380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 342 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 248, 231 | 
| Conread position: | 26-331 | 
| Cow position: | chr28:33210290-33210596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 195 | 
| Alignm E-value: | 4e-27 | 
| Alignm gaps (pig, cow): | 155, 147 | 
| Conread position: | 26-341 | 
| Cow position: | chr28:34673501-34673817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 9e-24 | 
| Alignm gaps (pig, cow): | 56, 76 | 
| Conread position: | 26-462 | 
| Cow position: | chr28:34679498-34679070 (view UCSC Genome Browser custom track) | 
| Alignm length: | 442 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 3e-34 | 
| Alignm gaps (pig, cow): | 149, 108 | 
| Conread position: | 26-639 | 
| Cow position: | chr28:11333991-11333384 (view UCSC Genome Browser custom track) | 
| Alignm length: | 618 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 149 | 
| Conread position: | 26-667 | 
| Cow position: | chr28:9252912-9253554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 29, 574 | 
| Conread position: | 27-505 | 
| Cow position: | chr28:7758387-7758865 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 304 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 307, 317 | 
| Conread position: | 27-523 | 
| Cow position: | chr28:34696059-34696555 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 293 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 314, 319 | 
| Conread position: | 27-667 | 
| Cow position: | chr28:34695891-34696531 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 375 | 
| Alignm E-value: | 4e-38 | 
| Alignm gaps (pig, cow): | 433, 404 | 
| Conread position: | 28-591 | 
| Cow position: | chr28:11334073-11333510 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 68 | 
| Conread position: | 28-667 | 
| Cow position: | chr28:9252584-9253218 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 300, 156 | 
| Conread position: | 29-667 | 
| Cow position: | chr28:7757397-7758035 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 119 | 
| Conread position: | 31-662 | 
| Cow position: | chr28:11334154-11333523 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 466, 487 | 
| Conread position: | 44-476 | 
| Cow position: | chr28:33210223-33210657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 437 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 5, 213 | 
| Conread position: | 46-584 | 
| Cow position: | chr28:34673353-34673891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 543 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 127, 139 | 
| Conread position: | 48-586 | 
| Cow position: | chr28:34695996-34696534 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 323 | 
| Alignm E-value: | 1e-26 | 
| Alignm gaps (pig, cow): | 29, 37 | 
| Conread position: | 50-667 | 
| Cow position: | chr28:7757334-7757951 (view UCSC Genome Browser custom track) | 
| Alignm length: | 619 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 551, 533 | 
| Conread position: | 111-667 | 
| Cow position: | chr28:7810327-7810874 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 324, 198 | 
| Conread position: | 116-588 | 
| Cow position: | chr28:34679574-34679112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 2e-39 | 
| Alignm gaps (pig, cow): | 45, 34 | 
| Conread position: | 134-523 | 
| Cow position: | chr28:33210230-33210620 (view UCSC Genome Browser custom track) | 
| Alignm length: | 392 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 8e-34 | 
| Alignm gaps (pig, cow): | 196, 212 | 
| Conread position: | 135-667 | 
| Cow position: | chr28:9298570-9299098 (view UCSC Genome Browser custom track) | 
| Alignm length: | 538 | 
| Alignm identity: | 359 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 22, 15 | 
| Conread position: | 139-667 | 
| Cow position: | chr28:34673362-34673890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 9e-35 | 
| Alignm gaps (pig, cow): | 106, 130 | 
| Conread position: | 141-667 | 
| Cow position: | chr28:11334212-11333686 (view UCSC Genome Browser custom track) | 
| Alignm length: | 529 | 
| Alignm identity: | 327 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 192, 204 | 
| Conread position: | 149-667 | 
| Cow position: | chr28:7810281-7810790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 520 | 
| Alignm identity: | 334 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 437, 259 | 
| Conread position: | 161-667 | 
| Cow position: | chr28:9298347-9298848 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 5e-30 | 
| Alignm gaps (pig, cow): | 167, 5 | 
| Conread position: | 165-666 | 
| Cow position: | chr28:9289705-9290202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 306 | 
| Alignm E-value: | 1e-27 | 
| Alignm gaps (pig, cow): | 10, 16 | 
| Conread position: | 177-667 | 
| Cow position: | chr28:34679597-34679117 (view UCSC Genome Browser custom track) | 
| Alignm length: | 498 | 
| Alignm identity: | 332 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 14, 19 | 
| Conread position: | 212-583 | 
| Cow position: | chr28:33210223-33210596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 375 | 
| Alignm identity: | 236 | 
| Alignm E-value: | 3e-33 | 
| Alignm gaps (pig, cow): | 5, 42 | 
| Conread position: | 219-667 | 
| Cow position: | chr28:34695831-34696279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 135, 163 | 
| Conread position: | 296-667 | 
| Cow position: | chr28:33210223-33210596 (view UCSC Genome Browser custom track) | 
| Alignm length: | 377 | 
| Alignm identity: | 237 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 5, 68 | 
| Conread position: | 384-664 | 
| Cow position: | chr28:33210228-33210508 (view UCSC Genome Browser custom track) | 
| Alignm length: | 285 | 
| Alignm identity: | 191 | 
| Alignm E-value: | 2e-29 | 
| Alignm gaps (pig, cow): | 33, 37 | 
| Conread position: | 12-667 | 
| Cow position: | chr29:39627628-39626976 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 100, 93 | 
| Conread position: | 19-667 | 
| Cow position: | chr29:39627537-39626892 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 62, 83 | 
| Conread position: | 21-558 | 
| Cow position: | chr29:39627367-39626833 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 355 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 142, 112 | 
| Conread position: | 26-628 | 
| Cow position: | chr29:39627446-39626847 (view UCSC Genome Browser custom track) | 
| Alignm length: | 605 | 
| Alignm identity: | 388 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 218, 190 | 
| Conread position: | 1-584 | 
| Cow position: | chr3:62742899-62743460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 174, 94 | 
| Conread position: | 6-667 | 
| Cow position: | chr3:77351281-77350632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 11 | 
| Conread position: | 9-663 | 
| Cow position: | chr3:62722364-62721712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 26 | 
| Conread position: | 9-667 | 
| Cow position: | chr3:68045562-68046220 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 430 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 165 | 
| Conread position: | 10-667 | 
| Cow position: | chr3:62722279-62721622 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 443 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 172, 165 | 
| Conread position: | 13-638 | 
| Cow position: | chr3:62722192-62721567 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 162 | 
| Conread position: | 14-350 | 
| Cow position: | chr3:68045987-68046323 (view UCSC Genome Browser custom track) | 
| Alignm length: | 337 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 1e-38 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 15-667 | 
| Cow position: | chr3:68027059-68027711 (view UCSC Genome Browser custom track) | 
| Alignm length: | 657 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 244, 256 | 
| Conread position: | 16-321 | 
| Cow position: | chr3:68027480-68027784 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 208 | 
| Alignm E-value: | 3e-37 | 
| Alignm gaps (pig, cow): | 272, 259 | 
| Conread position: | 21-559 | 
| Cow position: | chr3:68027233-68027769 (view UCSC Genome Browser custom track) | 
| Alignm length: | 542 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 236, 246 | 
| Conread position: | 26-427 | 
| Cow position: | chr3:62743075-62743471 (view UCSC Genome Browser custom track) | 
| Alignm length: | 405 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 148, 42 | 
| Conread position: | 26-473 | 
| Cow position: | chr3:62722011-62721564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 448 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-585 | 
| Cow position: | chr3:68027154-68027713 (view UCSC Genome Browser custom track) | 
| Alignm length: | 563 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 135, 141 | 
| Conread position: | 26-628 | 
| Cow position: | chr3:68045747-68046349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 607 | 
| Alignm identity: | 400 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 141 | 
| Conread position: | 26-665 | 
| Cow position: | chr3:62742257-62742891 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 67 | 
| Conread position: | 26-667 | 
| Cow position: | chr3:62742592-62743207 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 235, 49 | 
| Conread position: | 26-667 | 
| Cow position: | chr3:62742839-62743459 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 45, 147 | 
| Conread position: | 27-555 | 
| Cow position: | chr3:77351094-77350576 (view UCSC Genome Browser custom track) | 
| Alignm length: | 532 | 
| Alignm identity: | 346 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 116, 57 | 
| Conread position: | 27-637 | 
| Cow position: | chr3:77351177-77350578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 614 | 
| Alignm identity: | 385 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 156, 67 | 
| Conread position: | 29-667 | 
| Cow position: | chr3:68026990-68027627 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 417 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 11 | 
| Conread position: | 111-508 | 
| Cow position: | chr3:62743076-62743468 (view UCSC Genome Browser custom track) | 
| Alignm length: | 399 | 
| Alignm identity: | 266 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 140, 39 | 
| Conread position: | 111-667 | 
| Cow position: | chr3:62722346-62721790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 34, 6 | 
| Conread position: | 133-667 | 
| Cow position: | chr3:68045602-68046136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 537 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 52, 40 | 
| Conread position: | 158-653 | 
| Cow position: | chr3:68026950-68027445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 499 | 
| Alignm identity: | 319 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 103, 110 | 
| Conread position: | 180-665 | 
| Cow position: | chr3:62742242-62742724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 489 | 
| Alignm identity: | 318 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 80 | 
| Conread position: | 185-667 | 
| Cow position: | chr3:68026814-68027291 (view UCSC Genome Browser custom track) | 
| Alignm length: | 483 | 
| Alignm identity: | 303 | 
| Alignm E-value: | 1.96182e-44 | 
| Alignm gaps (pig, cow): | 41, 0 | 
| Conread position: | 206-470 | 
| Cow position: | chr3:16020466-16020209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 51, 0 | 
| Conread position: | 363-667 | 
| Cow position: | chr3:62742258-62742561 (view UCSC Genome Browser custom track) | 
| Alignm length: | 307 | 
| Alignm identity: | 199 | 
| Alignm E-value: | 4e-29 | 
| Alignm gaps (pig, cow): | 13, 9 | 
| Conread position: | 375-638 | 
| Cow position: | chr3:16020465-16020209 (view UCSC Genome Browser custom track) | 
| Alignm length: | 265 | 
| Alignm identity: | 175 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 225, 58 | 
| Conread position: | 445-667 | 
| Cow position: | chr3:62722348-62722126 (view UCSC Genome Browser custom track) | 
| Alignm length: | 224 | 
| Alignm identity: | 151 | 
| Alignm E-value: | 9e-26 | 
| Alignm gaps (pig, cow): | 35, 19 | 
| Conread position: | 25-667 | 
| Cow position: | chr4:42314305-42313668 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 402 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 33, 88 | 
| Conread position: | 26-585 | 
| Cow position: | chr4:42315308-42314751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 565 | 
| Alignm identity: | 353 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 25 | 
| Conread position: | 26-586 | 
| Cow position: | chr4:42314219-42313665 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 1.4013e-45 | 
| Alignm gaps (pig, cow): | 336, 293 | 
| Conread position: | 27-662 | 
| Cow position: | chr4:42314805-42314171 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 387 | 
| Alignm E-value: | 3e-40 | 
| Alignm gaps (pig, cow): | 251, 183 | 
| Conread position: | 27-667 | 
| Cow position: | chr4:42314386-42313751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 3e-39 | 
| Alignm gaps (pig, cow): | 91, 24 | 
| Conread position: | 27-667 | 
| Cow position: | chr4:42315057-42314418 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 398 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 77, 63 | 
| Conread position: | 224-664 | 
| Cow position: | chr4:42315362-42314924 (view UCSC Genome Browser custom track) | 
| Alignm length: | 444 | 
| Alignm identity: | 269 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 112, 81 | 
| Conread position: | 309-667 | 
| Cow position: | chr4:42315361-42315005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 364 | 
| Alignm identity: | 232 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 44, 37 | 
| Conread position: | 24-332 | 
| Cow position: | chr5:34281401-34281715 (view UCSC Genome Browser custom track) | 
| Alignm length: | 319 | 
| Alignm identity: | 207 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 63, 195 | 
| Conread position: | 176-510 | 
| Cow position: | chr5:34281385-34281725 (view UCSC Genome Browser custom track) | 
| Alignm length: | 345 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 84, 177 | 
| Conread position: | 12-434 | 
| Cow position: | chr6:49341040-49341460 (view UCSC Genome Browser custom track) | 
| Alignm length: | 424 | 
| Alignm identity: | 299 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 91, 83 | 
| Conread position: | 13-667 | 
| Cow position: | chr6:49340706-49341359 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 463 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 87, 11 | 
| Conread position: | 16-653 | 
| Cow position: | chr6:49340793-49341429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 84, 7 | 
| Conread position: | 16-667 | 
| Cow position: | chr6:49396262-49396912 (view UCSC Genome Browser custom track) | 
| Alignm length: | 653 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 593, 11 | 
| Conread position: | 17-667 | 
| Cow position: | chr6:49396347-49396996 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 399 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 571, 6 | 
| Conread position: | 23-667 | 
| Cow position: | chr6:49340463-49341107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 162, 151 | 
| Conread position: | 23-667 | 
| Cow position: | chr6:49340631-49341275 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 438 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 72 | 
| Conread position: | 27-571 | 
| Cow position: | chr6:49340887-49341431 (view UCSC Genome Browser custom track) | 
| Alignm length: | 546 | 
| Alignm identity: | 368 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 146 | 
| Conread position: | 27-588 | 
| Cow position: | chr6:49396440-49397001 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 84 | 
| Conread position: | 27-639 | 
| Cow position: | chr6:49428879-49429491 (view UCSC Genome Browser custom track) | 
| Alignm length: | 616 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 314, 319 | 
| Conread position: | 27-667 | 
| Cow position: | chr6:49340551-49341191 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 68 | 
| Conread position: | 27-667 | 
| Cow position: | chr6:49396194-49396828 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 403 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 222, 37 | 
| Conread position: | 27-667 | 
| Cow position: | chr6:49428795-49429435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 152, 146 | 
| Conread position: | 29-667 | 
| Cow position: | chr6:49396112-49396744 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 60, 76 | 
| Conread position: | 31-648 | 
| Cow position: | chr6:49428547-49429164 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 356 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 150, 143 | 
| Conread position: | 32-667 | 
| Cow position: | chr6:49340388-49341023 (view UCSC Genome Browser custom track) | 
| Alignm length: | 639 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 304, 296 | 
| Conread position: | 111-667 | 
| Cow position: | chr6:49395942-49396492 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 50, 58 | 
| Conread position: | 158-667 | 
| Cow position: | chr6:49395905-49396408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 513 | 
| Alignm identity: | 325 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 259, 263 | 
| Conread position: | 160-667 | 
| Cow position: | chr6:49395824-49396324 (view UCSC Genome Browser custom track) | 
| Alignm length: | 511 | 
| Alignm identity: | 312 | 
| Alignm E-value: | 6e-34 | 
| Alignm gaps (pig, cow): | 33, 8 | 
| Conread position: | 180-667 | 
| Cow position: | chr6:49340368-49340855 (view UCSC Genome Browser custom track) | 
| Alignm length: | 492 | 
| Alignm identity: | 340 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 259, 251 | 
| Conread position: | 1-463 | 
| Cow position: | chr7:42878735-42878273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 465 | 
| Alignm identity: | 321 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 334, 344 | 
| Conread position: | 1-584 | 
| Cow position: | chr7:1438120-1438701 (view UCSC Genome Browser custom track) | 
| Alignm length: | 589 | 
| Alignm identity: | 350 | 
| Alignm E-value: | 5e-33 | 
| Alignm gaps (pig, cow): | 153, 77 | 
| Conread position: | 1-630 | 
| Cow position: | chr7:11601066-11600437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 407 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 110, 88 | 
| Conread position: | 1-666 | 
| Cow position: | chr7:1014142-1014801 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 419 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 98 | 
| Conread position: | 1-667 | 
| Cow position: | chr7:11601150-11600484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 603, 611 | 
| Conread position: | 1-667 | 
| Cow position: | chr7:42879323-42878657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 506, 516 | 
| Conread position: | 6-667 | 
| Cow position: | chr7:8277637-8278299 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 421 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 16, 103 | 
| Conread position: | 8-332 | 
| Cow position: | chr7:1439935-1440258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 325 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 36, 0 | 
| Conread position: | 8-355 | 
| Cow position: | chr7:1438377-1438724 (view UCSC Genome Browser custom track) | 
| Alignm length: | 349 | 
| Alignm identity: | 219 | 
| Alignm E-value: | 4e-31 | 
| Alignm gaps (pig, cow): | 71, 84 | 
| Conread position: | 8-637 | 
| Cow position: | chr7:3180161-3180790 (view UCSC Genome Browser custom track) | 
| Alignm length: | 631 | 
| Alignm identity: | 446 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 173, 166 | 
| Conread position: | 8-667 | 
| Cow position: | chr7:42879064-42878405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 456 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 593, 582 | 
| Conread position: | 9-427 | 
| Cow position: | chr7:1438294-1438712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 422 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 1e-31 | 
| Alignm gaps (pig, cow): | 79, 90 | 
| Conread position: | 9-630 | 
| Cow position: | chr7:42878895-42878274 (view UCSC Genome Browser custom track) | 
| Alignm length: | 623 | 
| Alignm identity: | 429 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 152, 158 | 
| Conread position: | 9-667 | 
| Cow position: | chr7:1439598-1440257 (view UCSC Genome Browser custom track) | 
| Alignm length: | 667 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 95, 42 | 
| Conread position: | 9-667 | 
| Cow position: | chr7:42878979-42878321 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 498, 509 | 
| Conread position: | 9-667 | 
| Cow position: | chr7:42879231-42878573 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 592, 581 | 
| Conread position: | 11-666 | 
| Cow position: | chr7:8277219-8277878 (view UCSC Genome Browser custom track) | 
| Alignm length: | 664 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 13, 250 | 
| Conread position: | 12-505 | 
| Cow position: | chr7:18390294-18390787 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 315 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 329, 334 | 
| Conread position: | 12-561 | 
| Cow position: | chr7:1014903-1015452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 553 | 
| Alignm identity: | 371 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 5, 15 | 
| Conread position: | 12-639 | 
| Cow position: | chr7:3180249-3180875 (view UCSC Genome Browser custom track) | 
| Alignm length: | 632 | 
| Alignm identity: | 427 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 256, 260 | 
| Conread position: | 14-505 | 
| Cow position: | chr7:1014990-1015482 (view UCSC Genome Browser custom track) | 
| Alignm length: | 496 | 
| Alignm identity: | 337 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 73, 9 | 
| Conread position: | 15-439 | 
| Cow position: | chr7:1439858-1440281 (view UCSC Genome Browser custom track) | 
| Alignm length: | 428 | 
| Alignm identity: | 276 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 140, 113 | 
| Conread position: | 15-667 | 
| Cow position: | chr7:42879141-42878489 (view UCSC Genome Browser custom track) | 
| Alignm length: | 654 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 573, 585 | 
| Conread position: | 19-667 | 
| Cow position: | chr7:3179836-3180484 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 229, 246 | 
| Conread position: | 21-506 | 
| Cow position: | chr7:1438222-1438707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 488 | 
| Alignm identity: | 287 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 49, 72 | 
| Conread position: | 23-584 | 
| Cow position: | chr7:1439700-1440258 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 75 | 
| Conread position: | 23-663 | 
| Cow position: | chr7:3179924-3180564 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 66 | 
| Conread position: | 24-485 | 
| Cow position: | chr7:8325885-8326341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 473 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 77, 87 | 
| Conread position: | 25-527 | 
| Cow position: | chr7:8325634-8326135 (view UCSC Genome Browser custom track) | 
| Alignm length: | 508 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 87 | 
| Conread position: | 25-667 | 
| Cow position: | chr7:8277909-8278549 (view UCSC Genome Browser custom track) | 
| Alignm length: | 652 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 90, 64 | 
| Conread position: | 25-667 | 
| Cow position: | chr7:18390139-18390781 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 411 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 315, 321 | 
| Conread position: | 26-424 | 
| Cow position: | chr7:8243700-8244095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 404 | 
| Alignm identity: | 267 | 
| Alignm E-value: | 9.99967e-42 | 
| Alignm gaps (pig, cow): | 158, 146 | 
| Conread position: | 26-429 | 
| Cow position: | chr7:18390392-18390795 (view UCSC Genome Browser custom track) | 
| Alignm length: | 406 | 
| Alignm identity: | 262 | 
| Alignm E-value: | 5.00264e-43 | 
| Alignm gaps (pig, cow): | 315, 320 | 
| Conread position: | 26-584 | 
| Cow position: | chr7:1014833-1015391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 559 | 
| Alignm identity: | 380 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-585 | 
| Cow position: | chr7:8325551-8326110 (view UCSC Genome Browser custom track) | 
| Alignm length: | 566 | 
| Alignm identity: | 361 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 86 | 
| Conread position: | 26-662 | 
| Cow position: | chr7:8243029-8243664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 410 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 50, 59 | 
| Conread position: | 26-667 | 
| Cow position: | chr7:3179759-3180400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 63, 75 | 
| Conread position: | 26-667 | 
| Cow position: | chr7:8243281-8243921 (view UCSC Genome Browser custom track) | 
| Alignm length: | 651 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 76, 86 | 
| Conread position: | 26-667 | 
| Cow position: | chr7:8324879-8325520 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 416 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 85 | 
| Conread position: | 26-667 | 
| Cow position: | chr7:8325131-8325772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 650 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 86 | 
| Conread position: | 26-667 | 
| Cow position: | chr7:8325383-8326024 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 418 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 250, 236 | 
| Conread position: | 26-667 | 
| Cow position: | chr7:11601209-11600568 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 414, 405 | 
| Conread position: | 27-546 | 
| Cow position: | chr7:11600956-11600437 (view UCSC Genome Browser custom track) | 
| Alignm length: | 522 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 76 | 
| Conread position: | 27-588 | 
| Cow position: | chr7:18390225-18390786 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 404, 421 | 
| Conread position: | 27-667 | 
| Cow position: | chr7:1014750-1015390 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 244 | 
| Conread position: | 27-667 | 
| Cow position: | chr7:3180012-3180652 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 72, 67 | 
| Conread position: | 27-667 | 
| Cow position: | chr7:3180096-3180736 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 449 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 85, 78 | 
| Conread position: | 27-667 | 
| Cow position: | chr7:8242946-8243585 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 184 | 
| Conread position: | 32-667 | 
| Cow position: | chr7:8325473-8326108 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 66, 80 | 
| Conread position: | 34-585 | 
| Cow position: | chr7:8278170-8278712 (view UCSC Genome Browser custom track) | 
| Alignm length: | 561 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 73, 60 | 
| Conread position: | 35-667 | 
| Cow position: | chr7:1014512-1015138 (view UCSC Genome Browser custom track) | 
| Alignm length: | 637 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 57 | 
| Conread position: | 39-603 | 
| Cow position: | chr7:8243545-8244104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 572 | 
| Alignm identity: | 358 | 
| Alignm E-value: | 5.04467e-44 | 
| Alignm gaps (pig, cow): | 44, 73 | 
| Conread position: | 42-585 | 
| Cow position: | chr7:11434822-11434286 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 4e-30 | 
| Alignm gaps (pig, cow): | 79, 50 | 
| Conread position: | 44-664 | 
| Cow position: | chr7:8324729-8325349 (view UCSC Genome Browser custom track) | 
| Alignm length: | 626 | 
| Alignm identity: | 405 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 139, 134 | 
| Conread position: | 108-667 | 
| Cow position: | chr7:1439444-1440005 (view UCSC Genome Browser custom track) | 
| Alignm length: | 569 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 144 | 
| Conread position: | 115-667 | 
| Cow position: | chr7:42879377-42878825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 555 | 
| Alignm identity: | 366 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 38, 32 | 
| Conread position: | 119-339 | 
| Cow position: | chr7:11434500-11434280 (view UCSC Genome Browser custom track) | 
| Alignm length: | 221 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 119-667 | 
| Cow position: | chr7:8243457-8244003 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 352 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 154 | 
| Conread position: | 123-508 | 
| Cow position: | chr7:11434657-11434279 (view UCSC Genome Browser custom track) | 
| Alignm length: | 387 | 
| Alignm identity: | 244 | 
| Alignm E-value: | 1e-32 | 
| Alignm gaps (pig, cow): | 306, 118 | 
| Conread position: | 126-667 | 
| Cow position: | chr7:11434822-11434288 (view UCSC Genome Browser custom track) | 
| Alignm length: | 544 | 
| Alignm identity: | 335 | 
| Alignm E-value: | 4.00001e-41 | 
| Alignm gaps (pig, cow): | 155, 138 | 
| Conread position: | 137-667 | 
| Cow position: | chr7:8242804-8243334 (view UCSC Genome Browser custom track) | 
| Alignm length: | 536 | 
| Alignm identity: | 333 | 
| Alignm E-value: | 2.00386e-43 | 
| Alignm gaps (pig, cow): | 57, 43 | 
| Conread position: | 141-667 | 
| Cow position: | chr7:3179706-3180232 (view UCSC Genome Browser custom track) | 
| Alignm length: | 531 | 
| Alignm identity: | 367 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 37 | 
| Conread position: | 157-667 | 
| Cow position: | chr7:1438190-1438700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 515 | 
| Alignm identity: | 314 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 191, 177 | 
| Conread position: | 184-667 | 
| Cow position: | chr7:18390046-18390529 (view UCSC Genome Browser custom track) | 
| Alignm length: | 486 | 
| Alignm identity: | 309 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 80, 88 | 
| Conread position: | 194-667 | 
| Cow position: | chr7:8324795-8325268 (view UCSC Genome Browser custom track) | 
| Alignm length: | 479 | 
| Alignm identity: | 320 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 79, 68 | 
| Conread position: | 195-427 | 
| Cow position: | chr7:11434508-11434276 (view UCSC Genome Browser custom track) | 
| Alignm length: | 234 | 
| Alignm identity: | 153 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 67, 71 | 
| Conread position: | 212-585 | 
| Cow position: | chr7:11434974-11434615 (view UCSC Genome Browser custom track) | 
| Alignm length: | 376 | 
| Alignm identity: | 250 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 50, 68 | 
| Conread position: | 221-667 | 
| Cow position: | chr7:8242804-8243250 (view UCSC Genome Browser custom track) | 
| Alignm length: | 450 | 
| Alignm identity: | 292 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 57, 41 | 
| Conread position: | 221-667 | 
| Cow position: | chr7:18389999-18390445 (view UCSC Genome Browser custom track) | 
| Alignm length: | 449 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 36, 47 | 
| Conread position: | 279-667 | 
| Cow position: | chr7:1014084-1014472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 393 | 
| Alignm identity: | 251 | 
| Alignm E-value: | 2e-35 | 
| Alignm gaps (pig, cow): | 124, 142 | 
| Conread position: | 288-667 | 
| Cow position: | chr7:8324722-8325100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 383 | 
| Alignm identity: | 249 | 
| Alignm E-value: | 9e-39 | 
| Alignm gaps (pig, cow): | 70, 8 | 
| Conread position: | 299-667 | 
| Cow position: | chr7:42879447-42879077 (view UCSC Genome Browser custom track) | 
| Alignm length: | 371 | 
| Alignm identity: | 223 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 5, 0 | 
| Conread position: | 445-667 | 
| Cow position: | chr7:11601210-11600988 (view UCSC Genome Browser custom track) | 
| Alignm length: | 223 | 
| Alignm identity: | 150 | 
| Alignm E-value: | 3e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-584 | 
| Cow position: | chr8:45201391-45201974 (view UCSC Genome Browser custom track) | 
| Alignm length: | 585 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 106, 111 | 
| Conread position: | 1-633 | 
| Cow position: | chr8:46816754-46817386 (view UCSC Genome Browser custom track) | 
| Alignm length: | 636 | 
| Alignm identity: | 439 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 23 | 
| Conread position: | 1-664 | 
| Cow position: | chr8:45201139-45201802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 665 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 334, 345 | 
| Conread position: | 1-667 | 
| Cow position: | chr8:46816082-46816748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 454 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 15, 20 | 
| Conread position: | 4-667 | 
| Cow position: | chr8:46815825-46816496 (view UCSC Genome Browser custom track) | 
| Alignm length: | 673 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 24, 603 | 
| Conread position: | 8-337 | 
| Cow position: | chr8:6958036-6957707 (view UCSC Genome Browser custom track) | 
| Alignm length: | 333 | 
| Alignm identity: | 217 | 
| Alignm E-value: | 1e-33 | 
| Alignm gaps (pig, cow): | 8, 15 | 
| Conread position: | 8-386 | 
| Cow position: | chr8:46817013-46817391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 380 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 16 | 
| Conread position: | 8-667 | 
| Cow position: | chr8:46816173-46816832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 450 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 499, 509 | 
| Conread position: | 9-488 | 
| Cow position: | chr8:45201567-45202039 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 328 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 98, 103 | 
| Conread position: | 9-663 | 
| Cow position: | chr8:45201063-45201717 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 455 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 96 | 
| Conread position: | 9-667 | 
| Cow position: | chr8:45200811-45201469 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 437 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 74 | 
| Conread position: | 9-667 | 
| Cow position: | chr8:45201231-45201889 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 169, 164 | 
| Conread position: | 9-667 | 
| Cow position: | chr8:46816006-46816664 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 440 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 102, 80 | 
| Conread position: | 9-667 | 
| Cow position: | chr8:46816258-46816916 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 584, 590 | 
| Conread position: | 9-667 | 
| Cow position: | chr8:46816678-46817336 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 448 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 164, 169 | 
| Conread position: | 9-667 | 
| Cow position: | chr8:48407249-48406591 (view UCSC Genome Browser custom track) | 
| Alignm length: | 669 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 70, 94 | 
| Conread position: | 12-666 | 
| Cow position: | chr8:48406994-48406342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 409 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 91 | 
| Conread position: | 14-667 | 
| Cow position: | chr8:46816600-46817252 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 421, 9 | 
| Conread position: | 14-667 | 
| Cow position: | chr8:48407665-48407011 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 426 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 8, 91 | 
| Conread position: | 15-667 | 
| Cow position: | chr8:55581041-55581693 (view UCSC Genome Browser custom track) | 
| Alignm length: | 656 | 
| Alignm identity: | 432 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 317, 330 | 
| Conread position: | 16-629 | 
| Cow position: | chr8:48406906-48406293 (view UCSC Genome Browser custom track) | 
| Alignm length: | 620 | 
| Alignm identity: | 401 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 86, 76 | 
| Conread position: | 17-421 | 
| Cow position: | chr8:55581296-55581699 (view UCSC Genome Browser custom track) | 
| Alignm length: | 408 | 
| Alignm identity: | 265 | 
| Alignm E-value: | 1.00053e-42 | 
| Alignm gaps (pig, cow): | 144, 9 | 
| Conread position: | 23-665 | 
| Cow position: | chr8:45200909-45201551 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 113, 105 | 
| Conread position: | 23-667 | 
| Cow position: | chr8:48407151-48406507 (view UCSC Genome Browser custom track) | 
| Alignm length: | 647 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 246, 238 | 
| Conread position: | 23-667 | 
| Cow position: | chr8:48407487-48406843 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 89, 72 | 
| Conread position: | 25-667 | 
| Cow position: | chr8:46816358-46817000 (view UCSC Genome Browser custom track) | 
| Alignm length: | 644 | 
| Alignm identity: | 441 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 597, 603 | 
| Conread position: | 25-667 | 
| Cow position: | chr8:46816526-46817168 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 444 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 417, 400 | 
| Conread position: | 26-554 | 
| Cow position: | chr8:46816863-46817391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 530 | 
| Alignm identity: | 347 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 409, 388 | 
| Conread position: | 26-557 | 
| Cow position: | chr8:55581220-55581751 (view UCSC Genome Browser custom track) | 
| Alignm length: | 535 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 249, 254 | 
| Conread position: | 26-647 | 
| Cow position: | chr8:48407400-48406779 (view UCSC Genome Browser custom track) | 
| Alignm length: | 625 | 
| Alignm identity: | 415 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 53, 59 | 
| Conread position: | 26-665 | 
| Cow position: | chr8:55580968-55581607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 501, 506 | 
| Conread position: | 26-667 | 
| Cow position: | chr8:46816443-46817084 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-667 | 
| Cow position: | chr8:48407064-48406423 (view UCSC Genome Browser custom track) | 
| Alignm length: | 648 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 59 | 
| Conread position: | 26-667 | 
| Cow position: | chr8:48407316-48406675 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 414 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 240, 232 | 
| Conread position: | 27-667 | 
| Cow position: | chr8:45201333-45201973 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 134, 140 | 
| Conread position: | 27-667 | 
| Cow position: | chr8:55580885-55581525 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 154, 146 | 
| Conread position: | 29-667 | 
| Cow position: | chr8:45200999-45201637 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 442 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 21, 15 | 
| Conread position: | 31-667 | 
| Cow position: | chr8:55580805-55581441 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 428 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 46, 72 | 
| Conread position: | 101-667 | 
| Cow position: | chr8:46815600-46816160 (view UCSC Genome Browser custom track) | 
| Alignm length: | 571 | 
| Alignm identity: | 354 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 340, 183 | 
| Conread position: | 111-472 | 
| Cow position: | chr8:6958017-6957657 (view UCSC Genome Browser custom track) | 
| Alignm length: | 363 | 
| Alignm identity: | 224 | 
| Alignm E-value: | 3e-28 | 
| Alignm gaps (pig, cow): | 71, 62 | 
| Conread position: | 144-667 | 
| Cow position: | chr8:45200778-45201301 (view UCSC Genome Browser custom track) | 
| Alignm length: | 527 | 
| Alignm identity: | 344 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 132, 115 | 
| Conread position: | 153-629 | 
| Cow position: | chr8:6958059-6957586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 480 | 
| Alignm identity: | 298 | 
| Alignm E-value: | 8e-38 | 
| Alignm gaps (pig, cow): | 270, 278 | 
| Conread position: | 408-660 | 
| Cow position: | chr8:6958056-6957804 (view UCSC Genome Browser custom track) | 
| Alignm length: | 253 | 
| Alignm identity: | 172 | 
| Alignm E-value: | 5e-34 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-390 | 
| Cow position: | chrX:25324626-25324237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 390 | 
| Alignm identity: | 260 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-570 | 
| Cow position: | chrX:29045223-29044654 (view UCSC Genome Browser custom track) | 
| Alignm length: | 570 | 
| Alignm identity: | 383 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 1-667 | 
| Cow position: | chrX:25325298-25324632 (view UCSC Genome Browser custom track) | 
| Alignm length: | 668 | 
| Alignm identity: | 460 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 252, 244 | 
| Conread position: | 5-400 | 
| Cow position: | chrX:25310186-25310578 (view UCSC Genome Browser custom track) | 
| Alignm length: | 396 | 
| Alignm identity: | 273 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 10, 0 | 
| Conread position: | 8-520 | 
| Cow position: | chrX:25324703-25324195 (view UCSC Genome Browser custom track) | 
| Alignm length: | 514 | 
| Alignm identity: | 339 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 333, 350 | 
| Conread position: | 8-667 | 
| Cow position: | chrX:25309850-25310509 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 423 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 579, 591 | 
| Conread position: | 9-408 | 
| Cow position: | chrX:29045047-29044648 (view UCSC Genome Browser custom track) | 
| Alignm length: | 400 | 
| Alignm identity: | 277 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-558 | 
| Cow position: | chrX:25324786-25324237 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 7, 15 | 
| Conread position: | 9-637 | 
| Cow position: | chrX:25324870-25324242 (view UCSC Genome Browser custom track) | 
| Alignm length: | 630 | 
| Alignm identity: | 408 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 578, 590 | 
| Conread position: | 9-639 | 
| Cow position: | chrX:25309935-25310565 (view UCSC Genome Browser custom track) | 
| Alignm length: | 633 | 
| Alignm identity: | 412 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 334, 347 | 
| Conread position: | 9-667 | 
| Cow position: | chrX:25309767-25310425 (view UCSC Genome Browser custom track) | 
| Alignm length: | 662 | 
| Alignm identity: | 435 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 68, 89 | 
| Conread position: | 9-667 | 
| Cow position: | chrX:25325122-25324464 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 332, 340 | 
| Conread position: | 9-667 | 
| Cow position: | chrX:25325206-25324548 (view UCSC Genome Browser custom track) | 
| Alignm length: | 659 | 
| Alignm identity: | 445 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 9-667 | 
| Cow position: | chrX:25325374-25324716 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 461 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 93, 81 | 
| Conread position: | 9-667 | 
| Cow position: | chrX:29045698-29045061 (view UCSC Genome Browser custom track) | 
| Alignm length: | 661 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 422, 281 | 
| Conread position: | 12-667 | 
| Cow position: | chrX:25325539-25324884 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 452 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 65, 99 | 
| Conread position: | 12-667 | 
| Cow position: | chrX:25325707-25325052 (view UCSC Genome Browser custom track) | 
| Alignm length: | 660 | 
| Alignm identity: | 433 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 323, 333 | 
| Conread position: | 21-667 | 
| Cow position: | chrX:25325026-25324380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 649 | 
| Alignm identity: | 447 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 489, 497 | 
| Conread position: | 23-667 | 
| Cow position: | chrX:25309697-25310341 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 420 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 570, 583 | 
| Conread position: | 24-667 | 
| Cow position: | chrX:25325611-25324968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 646 | 
| Alignm identity: | 453 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 565, 558 | 
| Conread position: | 26-585 | 
| Cow position: | chrX:12627333-12627890 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 351 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 78, 62 | 
| Conread position: | 26-647 | 
| Cow position: | chrX:29045282-29044661 (view UCSC Genome Browser custom track) | 
| Alignm length: | 624 | 
| Alignm identity: | 413 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 51, 59 | 
| Conread position: | 26-667 | 
| Cow position: | chrX:25324937-25324296 (view UCSC Genome Browser custom track) | 
| Alignm length: | 642 | 
| Alignm identity: | 424 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 26-667 | 
| Cow position: | chrX:25325441-25324800 (view UCSC Genome Browser custom track) | 
| Alignm length: | 645 | 
| Alignm identity: | 434 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 484, 492 | 
| Conread position: | 27-577 | 
| Cow position: | chrX:25310037-25310586 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 364 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 230, 243 | 
| Conread position: | 27-667 | 
| Cow position: | chrX:25325776-25325136 (view UCSC Genome Browser custom track) | 
| Alignm length: | 643 | 
| Alignm identity: | 425 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 309, 322 | 
| Conread position: | 28-506 | 
| Cow position: | chrX:12627586-12628063 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 308 | 
| Alignm E-value: | 3.00004e-41 | 
| Alignm gaps (pig, cow): | 72, 82 | 
| Conread position: | 34-346 | 
| Cow position: | chrX:12627759-12628071 (view UCSC Genome Browser custom track) | 
| Alignm length: | 315 | 
| Alignm identity: | 196 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 165, 141 | 
| Conread position: | 36-667 | 
| Cow position: | chrX:13826876-13826245 (view UCSC Genome Browser custom track) | 
| Alignm length: | 634 | 
| Alignm identity: | 369 | 
| Alignm E-value: | 2e-36 | 
| Alignm gaps (pig, cow): | 214, 235 | 
| Conread position: | 38-667 | 
| Cow position: | chrX:12627429-12628056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 641 | 
| Alignm identity: | 392 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 69, 52 | 
| Conread position: | 39-585 | 
| Cow position: | chrX:12627513-12628058 (view UCSC Genome Browser custom track) | 
| Alignm length: | 551 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 3e-30 | 
| Alignm gaps (pig, cow): | 244, 154 | 
| Conread position: | 109-580 | 
| Cow position: | chrX:14181413-14180942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 476 | 
| Alignm identity: | 278 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 75, 68 | 
| Conread position: | 109-667 | 
| Cow position: | chrX:13826887-13826329 (view UCSC Genome Browser custom track) | 
| Alignm length: | 564 | 
| Alignm identity: | 324 | 
| Alignm E-value: | 3e-21 | 
| Alignm gaps (pig, cow): | 55, 69 | 
| Conread position: | 111-663 | 
| Cow position: | chrX:29045281-29044729 (view UCSC Genome Browser custom track) | 
| Alignm length: | 554 | 
| Alignm identity: | 377 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 225, 235 | 
| Conread position: | 119-423 | 
| Cow position: | chrX:29045756-29045452 (view UCSC Genome Browser custom track) | 
| Alignm length: | 308 | 
| Alignm identity: | 214 | 
| Alignm E-value: | 3.00018e-42 | 
| Alignm gaps (pig, cow): | 46, 63 | 
| Conread position: | 145-667 | 
| Cow position: | chrX:29045331-29044809 (view UCSC Genome Browser custom track) | 
| Alignm length: | 525 | 
| Alignm identity: | 343 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 17, 45 | 
| Conread position: | 151-579 | 
| Cow position: | chrX:29045808-29045380 (view UCSC Genome Browser custom track) | 
| Alignm length: | 430 | 
| Alignm identity: | 281 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 190, 195 | 
| Conread position: | 187-667 | 
| Cow position: | chrX:25309693-25310173 (view UCSC Genome Browser custom track) | 
| Alignm length: | 485 | 
| Alignm identity: | 329 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 309, 330 | 
| Conread position: | 190-667 | 
| Cow position: | chrX:29045367-29044893 (view UCSC Genome Browser custom track) | 
| Alignm length: | 481 | 
| Alignm identity: | 326 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 77, 35 | 
| Conread position: | 205-635 | 
| Cow position: | chrX:29045838-29045408 (view UCSC Genome Browser custom track) | 
| Alignm length: | 433 | 
| Alignm identity: | 271 | 
| Alignm E-value: | 7e-39 | 
| Alignm gaps (pig, cow): | 51, 56 | 
| Conread position: | 205-664 | 
| Cow position: | chrX:25325850-25325391 (view UCSC Genome Browser custom track) | 
| Alignm length: | 463 | 
| Alignm identity: | 291 | 
| Alignm E-value: | 9.00054e-42 | 
| Alignm gaps (pig, cow): | 48, 59 | 
| Conread position: | 213-667 | 
| Cow position: | chrX:29045986-29045544 (view UCSC Genome Browser custom track) | 
| Alignm length: | 458 | 
| Alignm identity: | 283 | 
| Alignm E-value: | 2e-27 | 
| Alignm gaps (pig, cow): | 47, 32 | 
| Conread position: | 216-667 | 
| Cow position: | chrX:12627271-12627720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 454 | 
| Alignm identity: | 268 | 
| Alignm E-value: | 4e-24 | 
| Alignm gaps (pig, cow): | 120, 148 | 
| Conread position: | 217-667 | 
| Cow position: | chrX:25326006-25325556 (view UCSC Genome Browser custom track) | 
| Alignm length: | 456 | 
| Alignm identity: | 272 | 
| Alignm E-value: | 4e-23 | 
| Alignm gaps (pig, cow): | 59, 54 | 
| Conread position: | 238-667 | 
| Cow position: | chrX:25309660-25310089 (view UCSC Genome Browser custom track) | 
| Alignm length: | 434 | 
| Alignm identity: | 297 | 
| Alignm E-value: | 0 | 
| Alignm gaps (pig, cow): | 42, 30 | 
| Conread position: | 315-667 | 
| Cow position: | chrX:13826933-13826581 (view UCSC Genome Browser custom track) | 
| Alignm length: | 354 | 
| Alignm identity: | 220 | 
| Alignm E-value: | 8e-30 | 
| Alignm gaps (pig, cow): | 271, 292 | 
