Cow genome map

Conread name: rfce25c_o5.y1

Conread position: 148-344
Cow position: chr10:58655276-58655473 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 138
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 47, 27

Conread position: 150-317
Cow position: chr10:15458-15629 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 5-229
Cow position: chr11:81036501-81036270 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 176
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 10, 0

Conread position: 7-315
Cow position: chr11:38068287-38067977 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 15

Conread position: 13-184
Cow position: chr11:79470892-79471064 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 134
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 71, 0

Conread position: 13-341
Cow position: chr11:27639545-27639217 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 179, 80

Conread position: 14-332
Cow position: chr11:9074907-9075225 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 173

Conread position: 93-312
Cow position: chr11:33948272-33948050 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 0

Conread position: 165-316
Cow position: chr11:10016123-10015977 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 11

Conread position: 200-343
Cow position: chr12:40901805-40901661 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 55, 9

Conread position: 2-336
Cow position: chr13:24672578-24672911 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 140

Conread position: 6-338
Cow position: chr13:5097270-5097606 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 303

Conread position: 21-320
Cow position: chr13:55663632-55663333 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 70

Conread position: 23-340
Cow position: chr13:42106522-42106217 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 230
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 169, 38

Conread position: 53-319
Cow position: chr13:39969985-39969717 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 38, 76

Conread position: 13-345
Cow position: chr14:2870034-2870347 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 243
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 181, 90

Conread position: 23-197
Cow position: chr14:9969333-9969163 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 61, 28

Conread position: 37-308
Cow position: chr14:36265466-36265194 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 172

Conread position: 148-331
Cow position: chr14:12969338-12969152 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 133
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 32

Conread position: 148-340
Cow position: chr14:47157388-47157198 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 132
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 125, 28

Conread position: 13-338
Cow position: chr15:26719516-26719830 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 141

Conread position: 114-348
Cow position: chr15:42560452-42560219 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 168
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 26

Conread position: 164-341
Cow position: chr15:39248292-39248468 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 24, 12

Conread position: 13-340
Cow position: chr16:24378720-24378394 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 45

Conread position: 110-340
Cow position: chr16:6052779-6052550 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 85, 130

Conread position: 149-340
Cow position: chr16:31693925-31694119 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 136
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 35, 71

Conread position: 176-316
Cow position: chr16:51080471-51080329 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 14, 43

Conread position: 6-344
Cow position: chr17:21398596-21398273 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 25

Conread position: 45-344
Cow position: chr17:9533908-9534206 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 211

Conread position: 162-338
Cow position: chr17:26475157-26475326 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 33, 48

Conread position: 5-315
Cow position: chr18:42478729-42478410 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 50

Conread position: 14-175
Cow position: chr18:48044069-48044229 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 77, 51

Conread position: 20-169
Cow position: chr18:51403228-51403078 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 23-220
Cow position: chr18:1392958-1392762 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 150
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 60, 133

Conread position: 15-226
Cow position: chr19:19748252-19748474 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 72, 36

Conread position: 23-318
Cow position: chr19:39872996-39873308 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 0

Conread position: 44-346
Cow position: chr19:36468543-36468848 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 164

Conread position: 151-315
Cow position: chr19:44191980-44191815 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 43, 20

Conread position: 191-348
Cow position: chr19:20036296-20036144 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 2-320
Cow position: chr20:18999499-18999195 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 230
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 23, 11

Conread position: 6-301
Cow position: chr20:7271087-7271386 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 259

Conread position: 13-343
Cow position: chr20:29587087-29586752 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 248
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 0

Conread position: 110-338
Cow position: chr20:7319319-7319546 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 120

Conread position: 148-331
Cow position: chr20:3315783-3315968 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 73

Conread position: 6-223
Cow position: chr21:29393535-29393761 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 178
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 0

Conread position: 15-338
Cow position: chr21:19051861-19051532 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 31

Conread position: 149-338
Cow position: chr21:38928527-38928342 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 97, 11

Conread position: 6-340
Cow position: chr22:45899630-45899303 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 234
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 76, 13

Conread position: 130-339
Cow position: chr22:15980045-15980255 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 160
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 62, 179

Conread position: 166-336
Cow position: chr22:11091728-11091553 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 22, 85

Conread position: 93-337
Cow position: chr23:10712772-10712531 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 148

Conread position: 148-316
Cow position: chr23:9617800-9617971 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 25, 73

Conread position: 148-331
Cow position: chr23:31610835-31610649 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 25, 68

Conread position: 165-331
Cow position: chr23:26598760-26598595 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 131
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 17, 10

Conread position: 6-347
Cow position: chr24:37151692-37151350 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 32

Conread position: 13-308
Cow position: chr24:37209532-37209233 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 45

Conread position: 15-340
Cow position: chr24:37139647-37139948 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 224
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 252, 11

Conread position: 114-347
Cow position: chr24:6099536-6099773 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 14, 22

Conread position: 160-340
Cow position: chr24:26287647-26287814 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 135
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 34, 0

Conread position: 165-316
Cow position: chr24:38024005-38024155 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 11

Conread position: 6-315
Cow position: chr25:8464652-8464964 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 220
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 63, 54

Conread position: 153-331
Cow position: chr25:33008026-33008205 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 39, 22

Conread position: 6-338
Cow position: chr26:8160644-8160312 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 45

Conread position: 13-260
Cow position: chr26:11791090-11791342 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 191
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 24, 52

Conread position: 148-331
Cow position: chr26:26975839-26975652 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 138
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 19, 30

Conread position: 161-348
Cow position: chr26:22856934-22857113 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 142
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 33, 125

Conread position: 3-338
Cow position: chr28:3727511-3727846 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 250

Conread position: 8-338
Cow position: chr28:3768951-3768633 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 239
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 5, 59

Conread position: 20-340
Cow position: chr28:32275946-32276266 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 221
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 44

Conread position: 148-319
Cow position: chr28:3719726-3719901 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 72

Conread position: 150-300
Cow position: chr28:776254-776107 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 123, 25

Conread position: 39-318
Cow position: chr29:45570136-45570431 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 201
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 182, 92

Conread position: 68-333
Cow position: chr29:32572546-32572808 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 24, 86

Conread position: 93-341
Cow position: chr29:2052690-2052936 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 181
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 11, 22

Conread position: 3-340
Cow position: chr5:65009108-65008773 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 102

Conread position: 6-340
Cow position: chr5:45991680-45992011 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 229
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 63, 20

Conread position: 13-338
Cow position: chr5:26621449-26621785 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 148

Conread position: 15-339
Cow position: chr5:69560473-69560806 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 251
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 43

Conread position: 20-338
Cow position: chr5:73928705-73929021 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 238

Conread position: 22-338
Cow position: chr5:51945937-51946244 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 235
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 170, 94

Conread position: 81-338
Cow position: chr5:51775368-51775112 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 135

Conread position: 127-330
Cow position: chr5:6968561-6968349 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 40, 92

Conread position: 137-317
Cow position: chr5:57573573-57573754 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 133, 49

Conread position: 148-316
Cow position: chr5:75565438-75565270 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 128
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 27

Conread position: 192-338
Cow position: chr5:48016828-48016681 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 78, 114

Conread position: 116-331
Cow position: chr6:50311103-50310882 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 168
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 69, 0

Conread position: 148-331
Cow position: chr6:15638803-15638614 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 17, 22

Conread position: 148-347
Cow position: chr6:14926160-14925964 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 149
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 46, 16

Conread position: 149-312
Cow position: chr6:35399909-35399750 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 119, 36

Conread position: 165-338
Cow position: chr6:27488223-27488394 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 29, 10

Conread position: 172-331
Cow position: chr6:50312283-50312447 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 49

Conread position: 6-137
Cow position: chr7:63125753-63125887 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 13-192
Cow position: chr7:15011174-15010996 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 144
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 142, 0

Conread position: 20-340
Cow position: chr7:59746138-59746459 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 220
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 66, 56

Conread position: 22-316
Cow position: chr7:59736706-59737003 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 202
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 68, 54

Conread position: 23-338
Cow position: chr7:48254671-48254354 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 209

Conread position: 195-330
Cow position: chr7:15010899-15010770 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 115, 19

Conread position: 22-348
Cow position: chr8:47354444-47354766 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 240
Alignm E-value: 7.00649e-44
Alignm gaps (pig, cow): 170, 126

Conread position: 54-340
Cow position: chr8:30539232-30539507 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 37, 66

Conread position: 70-315
Cow position: chr9:29270607-29270360 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 184
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 21, 181

Conread position: 191-338
Cow position: chr9:39181295-39181148 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 127, 26

Conread position: 2-338
Cow position: chrX:25402464-25402799 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 249
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 11, 207

Conread position: 20-317
Cow position: chrX:35252631-35252937 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 202
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 31

Conread position: 84-348
Cow position: chrX:15336534-15336265 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 111, 151

Conread position: 157-331
Cow position: chrX:34705605-34705430 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 61