Cow genome map

Conread name: rpfco0110_d5.y1

Conread position: 1-182
Cow position: chr1:67289423-67289609 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 141
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 47, 135

Conread position: 1-388
Cow position: chr1:31415211-31414798 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-390
Cow position: chr1:17938740-17938325 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 394

Conread position: 1-390
Cow position: chr1:61203397-61203813 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 177

Conread position: 2-142
Cow position: chr1:80902565-80902420 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 43, 105

Conread position: 2-153
Cow position: chr1:73434312-73434155 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 45, 0

Conread position: 2-159
Cow position: chr1:35711680-35711842 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 2-164
Cow position: chr1:81861024-81860856 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 135
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 47, 0

Conread position: 2-164
Cow position: chr1:99582779-99582621 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 127
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 47, 0

Conread position: 2-169
Cow position: chr1:24203636-24203476 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 131
Alignm E-value: 7e-28
Alignm gaps (pig, cow): 45, 58

Conread position: 2-173
Cow position: chr1:22223037-22223214 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 141
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-174
Cow position: chr1:14361458-14361280 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-174
Cow position: chr1:33899280-33899447 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 45, 97

Conread position: 2-175
Cow position: chr1:7300037-7300214 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 140
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 134

Conread position: 2-176
Cow position: chr1:84442977-84443157 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position: chr1:55318511-55318328 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 147
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 45, 100

Conread position: 2-182
Cow position: chr1:79335165-79334979 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 148
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 47, 0

Conread position: 2-183
Cow position: chr1:40533057-40532872 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 47, 108

Conread position: 2-183
Cow position: chr1:57397334-57397144 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 45, 0

Conread position: 2-185
Cow position: chr1:86506612-86506418 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 149
Alignm E-value: 9e-30
Alignm gaps (pig, cow): 45, 110

Conread position: 2-193
Cow position: chr1:32100079-32099882 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 157
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 45, 0

Conread position: 2-204
Cow position: chr1:83108597-83108389 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 161
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 46, 0

Conread position: 2-211
Cow position: chr1:72183865-72183650 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-225
Cow position: chr1:11666549-11666321 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 225

Conread position: 2-228
Cow position: chr1:10033523-10033756 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-230
Cow position: chr1:92035111-92035345 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-231
Cow position: chr1:52171796-52171560 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-231
Cow position: chr1:67001223-67001458 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-237
Cow position: chr1:8471146-8470908 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 60, 42

Conread position: 2-238
Cow position: chr1:7196206-7195964 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position: chr1:72086609-72086854 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:1023786-1023541 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:3669111-3668863 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 173
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:4208900-4208656 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:7324084-7324328 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:8556699-8556943 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:8745511-8745754 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position: chr1:9263092-9262848 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:11199618-11199373 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:14241046-14240810 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 45, 121

Conread position: 2-240
Cow position: chr1:15149630-15149386 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:16798081-16797839 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 152

Conread position: 2-240
Cow position: chr1:17436661-17436418 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-240
Cow position: chr1:17765392-17765636 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:18087442-18087686 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:18487164-18486920 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:19161982-19162225 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 204

Conread position: 2-240
Cow position: chr1:19236484-19236240 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:19776078-19775834 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:20527173-20527417 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:20648453-20648697 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:20847000-20846756 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:21377545-21377301 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:25053574-25053330 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:26537173-26536929 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:26587964-26588207 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position: chr1:26607552-26607308 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:28714052-28714296 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:28812229-28811985 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position: chr1:29365421-29365663 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-240
Cow position: chr1:30103564-30103320 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:31106380-31106136 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:31351753-31351509 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:31534865-31535109 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:32564914-32564674 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 159

Conread position: 2-240
Cow position: chr1:32961487-32961246 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:33040019-33039775 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:33443148-33442911 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 173
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 65

Conread position: 2-240
Cow position: chr1:38279726-38279483 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr1:38478318-38478562 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:38711725-38711969 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 213

Conread position: 2-240
Cow position: chr1:42739420-42739664 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:47118970-47119214 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:48249728-48249972 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:49267896-49268141 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:52067640-52067884 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:54932941-54933185 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:56169973-56170217 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:56205797-56205553 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57363319-57363076 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 2-240
Cow position: chr1:57505804-57506048 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57526289-57526533 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57570844-57571088 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:57635807-57635561 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 186
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position: chr1:58171753-58171995 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 76

Conread position: 2-240
Cow position: chr1:59203250-59203006 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:59483850-59483606 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:60251413-60251169 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:60342064-60342313 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:61340307-61340063 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:62927482-62927726 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:63045898-63046142 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:63048592-63048835 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 240

Conread position: 2-240
Cow position: chr1:63341459-63341215 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:66490595-66490838 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:66972144-66971902 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 2-240
Cow position: chr1:67832123-67831879 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:68145958-68145714 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:68602617-68602373 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:69406171-69406415 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:69504361-69504117 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:70051254-70051496 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 186

Conread position: 2-240
Cow position: chr1:70069678-70069935 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 201
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:71794546-71794790 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:72812174-72812417 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 225

Conread position: 2-240
Cow position: chr1:75402909-75403151 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 138

Conread position: 2-240
Cow position: chr1:76618460-76618217 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-240
Cow position: chr1:76872895-76873139 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 184
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position: chr1:76878045-76878289 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:78587445-78587201 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:81302128-81302373 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:82478998-82479240 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 94

Conread position: 2-240
Cow position: chr1:85630349-85630593 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:85777446-85777202 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:86545124-86544880 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:86593291-86593047 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:86600002-86599758 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:87722674-87722430 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:88178871-88179115 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:89186434-89186201 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 7e-38
Alignm gaps (pig, cow): 42, 100

Conread position: 2-240
Cow position: chr1:89431416-89431660 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:90605863-90605619 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:91673245-91673489 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr1:93857536-93857779 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 149

Conread position: 2-240
Cow position: chr1:99916453-99916696 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position: chr1:100509764-100510005 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 45, 180

Conread position: 2-240
Cow position: chr1:101797610-101797847 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 45, 103

Conread position: 2-240
Cow position: chr1:102431726-102431482 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr1:20831895-20832140 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr1:101010902-101010657 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 159

Conread position: 2-243
Cow position: chr1:28520664-28520911 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-243
Cow position: chr1:31363089-31362853 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 56

Conread position: 2-247
Cow position: chr1:23040109-23040357 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 105

Conread position: 2-294
Cow position: chr1:39889152-39889450 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-366
Cow position: chr1:26812059-26811668 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-367
Cow position: chr1:3970251-3969875 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 264

Conread position: 2-367
Cow position: chr1:10725637-10726031 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr1:21090463-21090872 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 313

Conread position: 2-367
Cow position: chr1:21134094-21133724 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 267

Conread position: 2-367
Cow position: chr1:24441034-24440654 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 94

Conread position: 2-367
Cow position: chr1:29037555-29037947 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-367
Cow position: chr1:33854295-33854674 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 281
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 69

Conread position: 2-367
Cow position: chr1:46613279-46612890 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 161

Conread position: 2-367
Cow position: chr1:48345198-48345577 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 283

Conread position: 2-367
Cow position: chr1:73064322-73063931 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-367
Cow position: chr1:78922000-78921606 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr1:79553508-79553900 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr1:91105055-91105449 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 258

Conread position: 2-367
Cow position: chr1:91902032-91902426 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-368
Cow position: chr1:71559731-71559342 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-372
Cow position: chr1:40058118-40058517 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-377
Cow position: chr1:21576561-21576960 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 135

Conread position: 2-377
Cow position: chr1:67005894-67006294 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 290
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 56, 133

Conread position: 2-377
Cow position: chr1:69671608-69671205 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-382
Cow position: chr1:20867592-20867185 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 275
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 42, 0

Conread position: 2-383
Cow position: chr1:56631402-56631802 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 108

Conread position: 2-383
Cow position: chr1:69769832-69770242 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-383
Cow position: chr1:79589872-79590275 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 290

Conread position: 2-383
Cow position: chr1:82909816-82909411 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 2-383
Cow position: chr1:102552025-102552427 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 286

Conread position: 2-384
Cow position: chr1:21458705-21459102 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 161

Conread position: 2-384
Cow position: chr1:72767010-72766614 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 69

Conread position: 2-385
Cow position: chr1:13405372-13404961 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-385
Cow position: chr1:22012948-22012537 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 298

Conread position: 2-385
Cow position: chr1:22529789-22529387 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 109

Conread position: 2-385
Cow position: chr1:28677084-28677479 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 24

Conread position: 2-385
Cow position: chr1:35598797-35598387 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-385
Cow position: chr1:40681718-40681307 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 308

Conread position: 2-385
Cow position: chr1:55274029-55273618 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-385
Cow position: chr1:56424924-56425336 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 205

Conread position: 2-385
Cow position: chr1:79633539-79633126 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-385
Cow position: chr1:85794970-85795370 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-385
Cow position: chr1:85807597-85807189 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 116

Conread position: 2-386
Cow position: chr1:53311243-53311654 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 389

Conread position: 2-387
Cow position: chr1:51883628-51884035 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 2-387
Cow position: chr1:56644865-56644462 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 289

Conread position: 2-387
Cow position: chr1:99572550-99572138 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 21

Conread position: 2-388
Cow position: chr1:7837736-7837332 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 33

Conread position: 2-388
Cow position: chr1:18024784-18024391 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 191, 33

Conread position: 2-388
Cow position: chr1:21114408-21113994 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 294

Conread position: 2-388
Cow position: chr1:31191402-31190996 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 285
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 65, 46

Conread position: 2-388
Cow position: chr1:56141340-56140930 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 391

Conread position: 2-388
Cow position: chr1:72139225-72139624 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 261
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 47, 105

Conread position: 2-388
Cow position: chr1:86705165-86705566 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 284

Conread position: 2-388
Cow position: chr1:89484129-89484521 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-388
Cow position: chr1:95474875-95474473 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 54

Conread position: 2-388
Cow position: chr1:101130992-101130592 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 126

Conread position: 2-389
Cow position: chr1:101524373-101523971 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 175

Conread position: 2-390
Cow position: chr1:3383304-3382890 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 294

Conread position: 2-390
Cow position: chr1:6197263-6196850 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-390
Cow position: chr1:9261525-9261925 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 155

Conread position: 2-390
Cow position: chr1:13251503-13251116 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 225

Conread position: 2-390
Cow position: chr1:13438134-13438548 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-390
Cow position: chr1:18195641-18196024 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 204, 31

Conread position: 2-390
Cow position: chr1:30078956-30079370 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-390
Cow position: chr1:33548381-33547972 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 147

Conread position: 2-390
Cow position: chr1:57659632-57660029 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 219

Conread position: 2-390
Cow position: chr1:61342698-61342277 (view UCSC Genome Browser custom track)
Alignm length: 428
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 210

Conread position: 2-390
Cow position: chr1:65389572-65389986 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-390
Cow position: chr1:67078811-67078398 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 305

Conread position: 2-390
Cow position: chr1:68818889-68818480 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 281
Alignm E-value: 8.99999e-40
Alignm gaps (pig, cow): 47, 120

Conread position: 2-390
Cow position: chr1:89111845-89112250 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 287

Conread position: 2-391
Cow position: chr1:21132850-21132444 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 200

Conread position: 2-391
Cow position: chr1:31392280-31391863 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 273

Conread position: 3-240
Cow position: chr1:33715974-33716217 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position: chr1:55044248-55044005 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position: chr1:80565063-80564820 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-367
Cow position: chr1:48811180-48810787 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-388
Cow position: chr1:30034644-30035043 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 57, 155

Conread position: 3-390
Cow position: chr1:100451653-100451245 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 292

Conread position: 4-182
Cow position: chr1:79453951-79453767 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 143
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position: chr1:90865056-90865293 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 65, 52

Conread position: 4-386
Cow position: chr1:89090521-89090111 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 148

Conread position: 4-387
Cow position: chr1:20001984-20001572 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 280
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 45, 302

Conread position: 4-388
Cow position: chr1:45021249-45021655 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 7, 24

Conread position: 4-388
Cow position: chr1:58418691-58419100 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 291

Conread position: 4-390
Cow position: chr1:25552822-25553233 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 291

Conread position: 4-391
Cow position: chr1:40577957-40578350 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 128
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 6-388
Cow position: chr1:71791939-71792358 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 354

Conread position: 7-240
Cow position: chr1:98354377-98354138 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 8-383
Cow position: chr1:67317722-67318111 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 262
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 41, 214

Conread position: 8-388
Cow position: chr1:24654854-24655259 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 287

Conread position: 8-388
Cow position: chr1:70388295-70387898 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 118

Conread position: 9-377
Cow position: chr1:19441505-19441124 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 81

Conread position: 10-383
Cow position: chr1:53519687-53520086 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 286

Conread position: 10-389
Cow position: chr1:42056638-42057022 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 269
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 39, 91

Conread position: 13-383
Cow position: chr1:92279769-92279388 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 264
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 36, 269

Conread position: 13-385
Cow position: chr1:73403812-73404204 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 270
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 35, 70

Conread position: 15-363
Cow position: chr1:27493991-27494358 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 130

Conread position: 18-368
Cow position: chr1:52864245-52863881 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 242
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 30, 0

Conread position: 20-366
Cow position: chr1:28414184-28413818 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 241
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 29, 89

Conread position: 26-367
Cow position: chr1:57758952-57759320 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 234

Conread position: 28-382
Cow position: chr1:57679317-57678956 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 267
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 181

Conread position: 55-377
Cow position: chr1:17009651-17009316 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 178, 230

Conread position: 62-366
Cow position: chr1:57958479-57958154 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 245
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 224

Conread position: 69-355
Cow position: chr1:9377393-9377085 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 230
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 225

Conread position: 69-382
Cow position: chr1:22226730-22227044 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 212, 87

Conread position: 70-384
Cow position: chr1:30494655-30494989 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 220

Conread position: 72-366
Cow position: chr1:98989316-98989021 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 219
Alignm E-value: 5e-35
Alignm gaps (pig, cow): 170, 10

Conread position: 72-388
Cow position: chr1:24562663-24562326 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 245
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 18, 226

Conread position: 96-367
Cow position: chr1:31707595-31707889 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 216
Alignm E-value: 6e-37
Alignm gaps (pig, cow): 98, 158

Conread position: 96-383
Cow position: chr1:66685399-66685109 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 192
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 177, 84

Conread position: 102-385
Cow position: chr1:11874519-11874218 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 223
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 40

Conread position: 103-388
Cow position: chr1:43449381-43449081 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 220
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 101, 170

Conread position: 104-389
Cow position: chr1:6165108-6165406 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 231
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 50

Conread position: 113-367
Cow position: chr1:90393624-90393350 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 119, 20

Conread position: 114-377
Cow position: chr1:100888376-100888092 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 179

Conread position: 115-383
Cow position: chr1:100340437-100340166 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 177
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 110, 135

Conread position: 124-390
Cow position: chr1:82091037-82091323 (view UCSC Genome Browser custom track)
Alignm length: 291
Alignm identity: 216
Alignm E-value: 8e-39
Alignm gaps (pig, cow): 92, 45

Conread position: 127-388
Cow position: chr1:55328083-55327808 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 213
Alignm E-value: 3.9937e-43
Alignm gaps (pig, cow): 110, 51

Conread position: 230-367
Cow position: chr1:72103384-72103517 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 232-389
Cow position: chr1:28176025-28176182 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 10, 42

Conread position: 236-367
Cow position: chr1:7415760-7415892 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 34

Conread position: 236-368
Cow position: chr1:81308635-81308769 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 236-377
Cow position: chr1:31646350-31646208 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 37

Conread position: 236-388
Cow position: chr1:64595036-64594881 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 75, 37

Conread position: 243-390
Cow position: chr1:3263268-3263418 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 12, 32

Conread position: 244-378
Cow position: chr1:81860230-81860091 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 31

Conread position: 244-384
Cow position: chr1:68281829-68281974 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 11, 31

Conread position: 244-388
Cow position: chr1:52510834-52510689 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 27

Conread position: 244-388
Cow position: chr1:56746164-56746313 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 11, 31

Conread position: 244-388
Cow position: chr1:67913364-67913505 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 126, 29

Conread position: 244-389
Cow position: chr1:63239974-63240122 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 67, 29

Conread position: 245-388
Cow position: chr1:26838236-26838384 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 10, 30

Conread position: 247-385
Cow position: chr1:59202942-59202803 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 64, 26

Conread position: 2-134
Cow position: chr10:33868146-33868008 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 45, 0

Conread position: 2-144
Cow position: chr10:51950059-51949911 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 2-146
Cow position: chr10:25004951-25005101 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-159
Cow position: chr10:52738895-52739058 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 2-164
Cow position: chr10:55974035-55974203 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 136
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 2-165
Cow position: chr10:3817310-3817476 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 132
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 45, 145

Conread position: 2-173
Cow position: chr10:66773357-66773180 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 2-174
Cow position: chr10:3495180-3495002 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 45, 0

Conread position: 2-176
Cow position: chr10:25632799-25632621 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 142
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 116

Conread position: 2-176
Cow position: chr10:57473265-57473085 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 141
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position: chr10:32699703-32699888 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 45, 82

Conread position: 2-186
Cow position: chr10:38273028-38273218 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 145
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 45, 0

Conread position: 2-190
Cow position: chr10:46171450-46171644 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 157
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 2-195
Cow position: chr10:21414686-21414487 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 161
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 41, 113

Conread position: 2-204
Cow position: chr10:66142522-66142730 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 167
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-205
Cow position: chr10:40347620-40347411 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 169
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-207
Cow position: chr10:17436307-17436517 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 166
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 47, 117

Conread position: 2-211
Cow position: chr10:34335459-34335244 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-213
Cow position: chr10:128635-128850 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 164
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 45, 189

Conread position: 2-225
Cow position: chr10:12101332-12101106 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 171
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 46, 92

Conread position: 2-238
Cow position: chr10:325720-325484 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 184
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 45, 142

Conread position: 2-238
Cow position: chr10:22250269-22250511 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:1377455-1377212 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 180

Conread position: 2-240
Cow position: chr10:1380534-1380778 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:6221283-6221527 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:6253790-6253548 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 59

Conread position: 2-240
Cow position: chr10:7858292-7858056 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 160
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 103

Conread position: 2-240
Cow position: chr10:8293168-8293412 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:8681662-8681906 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:10585168-10585408 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 45, 113

Conread position: 2-240
Cow position: chr10:14332803-14332559 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position: chr10:15489862-15490109 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 192
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 113

Conread position: 2-240
Cow position: chr10:17222410-17222654 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:18106603-18106846 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-240
Cow position: chr10:19390554-19390310 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:19514268-19514511 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 82

Conread position: 2-240
Cow position: chr10:21450161-21449917 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:21489976-21490219 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-240
Cow position: chr10:21729665-21729421 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:22104518-22104762 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:23412084-23412328 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:23849004-23849248 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:25563516-25563272 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:26539871-26539628 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-240
Cow position: chr10:26569732-26569488 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:26923251-26923007 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:27004542-27004298 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:30682454-30682211 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position: chr10:31022017-31021773 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:32086726-32086964 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 45, 105

Conread position: 2-240
Cow position: chr10:36275138-36274894 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:36879418-36879174 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:37126179-37125935 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:37139266-37139022 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:37772917-37773161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:38817945-38818189 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:38941157-38941400 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 187
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 158

Conread position: 2-240
Cow position: chr10:38942664-38942908 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:39038013-39037769 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:41405414-41405658 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:43080799-43081043 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:46225870-46226106 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 101

Conread position: 2-240
Cow position: chr10:48241519-48241275 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:48374407-48374163 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:49503971-49504215 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr10:51558438-51558682 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr10:51837678-51837435 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 122

Conread position: 2-240
Cow position: chr10:57554297-57554054 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 225

Conread position: 2-240
Cow position: chr10:62775907-62776151 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-247
Cow position: chr10:24297465-24297214 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-248
Cow position: chr10:59840742-59840491 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 186
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 45, 202

Conread position: 2-285
Cow position: chr10:32009114-32009403 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 45, 0

Conread position: 2-346
Cow position: chr10:3181516-3181154 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 2-366
Cow position: chr10:55096101-55096491 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-367
Cow position: chr10:278318-277925 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-367
Cow position: chr10:1662929-1662541 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-367
Cow position: chr10:7895409-7895017 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-367
Cow position: chr10:9682130-9681741 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 179

Conread position: 2-367
Cow position: chr10:14806974-14807369 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position: chr10:17959403-17959790 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 2-367
Cow position: chr10:19141571-19141178 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr10:19842709-19843103 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-367
Cow position: chr10:21398183-21397789 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr10:22380755-22381149 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 160

Conread position: 2-367
Cow position: chr10:26765586-26765979 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-367
Cow position: chr10:28030896-28030504 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 362

Conread position: 2-367
Cow position: chr10:30719733-30720127 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr10:32364977-32365371 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 298

Conread position: 2-367
Cow position: chr10:33556620-33556231 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position: chr10:35824305-35823911 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 2-367
Cow position: chr10:38843201-38843556 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 228
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 45, 105

Conread position: 2-367
Cow position: chr10:41160453-41160837 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 288
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 45, 88

Conread position: 2-367
Cow position: chr10:41561438-41561044 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 307

Conread position: 2-367
Cow position: chr10:41570142-41570532 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 187

Conread position: 2-367
Cow position: chr10:42213912-42214307 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position: chr10:45647894-45648287 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr10:45978505-45978131 (view UCSC Genome Browser custom track)
Alignm length: 377
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 263

Conread position: 2-367
Cow position: chr10:47084072-47084458 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 290

Conread position: 2-367
Cow position: chr10:47909655-47910047 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 2-373
Cow position: chr10:50451595-50451989 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 387

Conread position: 2-374
Cow position: chr10:64304988-64304594 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 362

Conread position: 2-375
Cow position: chr10:22344502-22344904 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 117

Conread position: 2-381
Cow position: chr10:37530763-37530373 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 58, 249

Conread position: 2-381
Cow position: chr10:50199021-50199429 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 2-382
Cow position: chr10:20515951-20516362 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 162

Conread position: 2-383
Cow position: chr10:11000405-11000781 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 269
Alignm E-value: 8.00141e-43
Alignm gaps (pig, cow): 45, 97

Conread position: 2-383
Cow position: chr10:11623684-11623279 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 318
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 104

Conread position: 2-383
Cow position: chr10:14908297-14908702 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 295

Conread position: 2-383
Cow position: chr10:14976330-14976712 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 265
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 47, 18

Conread position: 2-383
Cow position: chr10:38542684-38542273 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 297

Conread position: 2-383
Cow position: chr10:40149100-40148708 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 210

Conread position: 2-383
Cow position: chr10:40736725-40737124 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 137

Conread position: 2-383
Cow position: chr10:50017324-50016931 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 107

Conread position: 2-385
Cow position: chr10:52826589-52826180 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-386
Cow position: chr10:31526748-31527148 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 140

Conread position: 2-387
Cow position: chr10:59174006-59173616 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 186, 46

Conread position: 2-387
Cow position: chr10:69936036-69935657 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 285
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 191, 47

Conread position: 2-388
Cow position: chr10:2466853-2466451 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 284
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 47, 107

Conread position: 2-388
Cow position: chr10:5785196-5784789 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 284
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 45, 120

Conread position: 2-388
Cow position: chr10:8459264-8459677 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-388
Cow position: chr10:20380950-20380534 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 53, 140

Conread position: 2-388
Cow position: chr10:24750948-24751364 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 95

Conread position: 2-388
Cow position: chr10:26732908-26732515 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 291

Conread position: 2-388
Cow position: chr10:29629230-29628814 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-388
Cow position: chr10:31375373-31374962 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 113

Conread position: 2-388
Cow position: chr10:32703800-32704216 (view UCSC Genome Browser custom track)
Alignm length: 418
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-388
Cow position: chr10:40140204-40139801 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 240

Conread position: 2-389
Cow position: chr10:16647271-16646859 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 207

Conread position: 2-390
Cow position: chr10:2117404-2116995 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 388

Conread position: 2-390
Cow position: chr10:3507101-3506692 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 197

Conread position: 2-390
Cow position: chr10:7279063-7278650 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position: chr10:11110322-11110723 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 37

Conread position: 2-390
Cow position: chr10:14846295-14846696 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 273
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 47, 83

Conread position: 2-390
Cow position: chr10:29174262-29174678 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 307

Conread position: 2-390
Cow position: chr10:34664731-34664324 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 330

Conread position: 2-390
Cow position: chr10:41139982-41139567 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 80

Conread position: 2-390
Cow position: chr10:56688025-56687635 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 229

Conread position: 2-390
Cow position: chr10:62405733-62405342 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 210

Conread position: 3-240
Cow position: chr10:19491738-19491495 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-240
Cow position: chr10:39441209-39441451 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 183

Conread position: 3-240
Cow position: chr10:39970981-39971224 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-388
Cow position: chr10:29106775-29106372 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 3-390
Cow position: chr10:17492373-17491953 (view UCSC Genome Browser custom track)
Alignm length: 422
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 302

Conread position: 4-240
Cow position: chr10:49430696-49430940 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 190
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 43, 216

Conread position: 4-366
Cow position: chr10:46173151-46172767 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 287

Conread position: 4-388
Cow position: chr10:19894083-19894456 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 269
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 43, 105

Conread position: 5-172
Cow position: chr10:39775966-39775793 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 140
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 42, 127

Conread position: 5-240
Cow position: chr10:42744628-42744873 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 6-240
Cow position: chr10:57986655-57986414 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 6-388
Cow position: chr10:37788954-37788550 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 169

Conread position: 7-240
Cow position: chr10:64347014-64347252 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 51, 173

Conread position: 8-211
Cow position: chr10:48742953-48742747 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 156
Alignm E-value: 5e-38
Alignm gaps (pig, cow): 39, 0

Conread position: 13-240
Cow position: chr10:7260221-7259988 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 13-375
Cow position: chr10:21710186-21709797 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 284

Conread position: 18-384
Cow position: chr10:11217138-11216745 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 31, 279

Conread position: 23-385
Cow position: chr10:44764747-44765139 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 24, 277

Conread position: 26-367
Cow position: chr10:326157-326521 (view UCSC Genome Browser custom track)
Alignm length: 367
Alignm identity: 249
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 23, 269

Conread position: 59-389
Cow position: chr10:49914642-49914305 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 228
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 11, 75

Conread position: 62-383
Cow position: chr10:25341215-25341555 (view UCSC Genome Browser custom track)
Alignm length: 345
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 51

Conread position: 63-376
Cow position: chr10:20388699-20388374 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 219

Conread position: 69-377
Cow position: chr10:47772534-47772857 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 214
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 88, 37

Conread position: 69-386
Cow position: chr10:19523034-19522704 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 66

Conread position: 87-367
Cow position: chr10:37909021-37908718 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 225
Alignm E-value: 6.99949e-42
Alignm gaps (pig, cow): 92, 112

Conread position: 87-390
Cow position: chr10:55036547-55036873 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 16

Conread position: 92-367
Cow position: chr10:55930616-55930914 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 202

Conread position: 146-388
Cow position: chr10:11406471-11406730 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 186
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 72, 142

Conread position: 149-385
Cow position: chr10:57553949-57553692 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 190
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 52, 104

Conread position: 163-366
Cow position: chr10:3494728-3494504 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 169
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 73, 129

Conread position: 173-388
Cow position: chr10:28568650-28568887 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 175
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 60, 119

Conread position: 179-367
Cow position: chr10:54072551-54072349 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 155
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 59, 106

Conread position: 189-383
Cow position: chr10:31636917-31637108 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 145
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 8, 33

Conread position: 230-383
Cow position: chr10:24759-24915 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 79, 43

Conread position: 230-388
Cow position: chr10:21414219-21414055 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 16, 46

Conread position: 231-390
Cow position: chr10:14964277-14964114 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 14, 55

Conread position: 236-367
Cow position: chr10:7826103-7825970 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 75, 37

Conread position: 236-367
Cow position: chr10:20870825-20870958 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 46

Conread position: 236-388
Cow position: chr10:14849153-14849004 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 134, 37

Conread position: 236-388
Cow position: chr10:60354437-60354592 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 75, 47

Conread position: 238-388
Cow position: chr10:39775287-39775138 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 37

Conread position: 244-388
Cow position: chr10:43289073-43288928 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 31

Conread position: 245-391
Cow position: chr10:31006009-31005862 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 66, 28

Conread position: 1-211
Cow position: chr11:83287055-83286839 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-240
Cow position: chr11:3795914-3796155 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 106

Conread position: 2-139
Cow position: chr11:63617982-63617839 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 2-152
Cow position: chr11:15987925-15988081 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 2-159
Cow position: chr11:38021800-38021637 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 2-179
Cow position: chr11:9432102-9432285 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 145
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 44, 0

Conread position: 2-182
Cow position: chr11:45157035-45156849 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 0

Conread position: 2-202
Cow position: chr11:38068945-38069148 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 45, 157

Conread position: 2-211
Cow position: chr11:66739541-66739329 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 166
Alignm E-value: 7e-39
Alignm gaps (pig, cow): 47, 113

Conread position: 2-218
Cow position: chr11:56917331-56917109 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-219
Cow position: chr11:32254629-32254851 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 176

Conread position: 2-220
Cow position: chr11:29547494-29547707 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 176
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 45, 169

Conread position: 2-235
Cow position: chr11:76371389-76371152 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 185
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 81

Conread position: 2-237
Cow position: chr11:5982784-5983024 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 182
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 201

Conread position: 2-240
Cow position: chr11:2285389-2285633 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:2534275-2534519 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:4267477-4267235 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 2-240
Cow position: chr11:5482769-5482526 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 176

Conread position: 2-240
Cow position: chr11:7121287-7121043 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 2-240
Cow position: chr11:8266488-8266735 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:9388012-9388257 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 133

Conread position: 2-240
Cow position: chr11:9707824-9708068 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:10699070-10698826 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:12177763-12178008 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:12317394-12317150 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:12354216-12353972 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position: chr11:17548834-17549078 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:19061398-19061154 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:19099809-19099565 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position: chr11:22618270-22618026 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:24494132-24493888 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:26400157-26400404 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 167

Conread position: 2-240
Cow position: chr11:27922469-27922714 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:28125191-28125435 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:28227103-28226858 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 111

Conread position: 2-240
Cow position: chr11:28631209-28631453 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:29614068-29614312 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:30929058-30929302 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:32078103-32077863 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-240
Cow position: chr11:32478136-32477892 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:32876267-32876023 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:35542392-35542148 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 0

Conread position: 2-240
Cow position: chr11:35738666-35738422 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:35861973-35861732 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 62

Conread position: 2-240
Cow position: chr11:39600186-39599942 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 186
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position: chr11:41168018-41167774 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:41261252-41261008 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:41313972-41314216 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:44580554-44580313 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 78

Conread position: 2-240
Cow position: chr11:48168391-48168153 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 198

Conread position: 2-240
Cow position: chr11:50510996-50510752 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:50834083-50833839 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:53429346-53429102 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:56463038-56463282 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:58136393-58136637 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:61848057-61847813 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:64353646-64353402 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:67453331-67453575 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:71332178-71332421 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 178

Conread position: 2-240
Cow position: chr11:72313124-72313368 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr11:72365864-72366108 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:74928475-74928723 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr11:75511516-75511271 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 181
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr11:79749206-79748962 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr11:44254750-44254995 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-269
Cow position: chr11:44515097-44514823 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 171
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-319
Cow position: chr11:29616619-29616286 (view UCSC Genome Browser custom track)
Alignm length: 337
Alignm identity: 255
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 104

Conread position: 2-345
Cow position: chr11:42372479-42372829 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 118

Conread position: 2-356
Cow position: chr11:40134132-40133764 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 132

Conread position: 2-357
Cow position: chr11:44516493-44516119 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-366
Cow position: chr11:38574807-38574416 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 2-367
Cow position: chr11:4032766-4032407 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 242

Conread position: 2-367
Cow position: chr11:10958507-10958899 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 110

Conread position: 2-367
Cow position: chr11:17105013-17104632 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 2-367
Cow position: chr11:18920910-18920527 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 2-367
Cow position: chr11:27725225-27724831 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 2-367
Cow position: chr11:35142655-35142262 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 257

Conread position: 2-367
Cow position: chr11:44154402-44154013 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr11:47973175-47972782 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 12

Conread position: 2-367
Cow position: chr11:51033963-51034346 (view UCSC Genome Browser custom track)
Alignm length: 386
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 189

Conread position: 2-367
Cow position: chr11:52846153-52846545 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 126

Conread position: 2-367
Cow position: chr11:65281695-65282080 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 288

Conread position: 2-367
Cow position: chr11:67920656-67920268 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-367
Cow position: chr11:73799022-73798631 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-367
Cow position: chr11:75402827-75402440 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 30

Conread position: 2-367
Cow position: chr11:84966790-84967178 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 252

Conread position: 2-368
Cow position: chr11:3495719-3496114 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 2-371
Cow position: chr11:61397939-61397546 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-377
Cow position: chr11:15835597-15835990 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 143

Conread position: 2-377
Cow position: chr11:36930846-36930455 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 188

Conread position: 2-383
Cow position: chr11:11256748-11257139 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 271
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 45, 125

Conread position: 2-383
Cow position: chr11:17279896-17279520 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 275
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 196, 76

Conread position: 2-383
Cow position: chr11:29012898-29013289 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 248
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 182

Conread position: 2-383
Cow position: chr11:48485398-48484987 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 275
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 47, 108

Conread position: 2-383
Cow position: chr11:83284572-83284968 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 115

Conread position: 2-385
Cow position: chr11:63390803-63390395 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 291

Conread position: 2-385
Cow position: chr11:67863594-67863193 (view UCSC Genome Browser custom track)
Alignm length: 404
Alignm identity: 271
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 68, 37

Conread position: 2-386
Cow position: chr11:8444311-8443900 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 296

Conread position: 2-387
Cow position: chr11:6343137-6343548 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 110

Conread position: 2-387
Cow position: chr11:37069516-37069159 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 367, 46

Conread position: 2-387
Cow position: chr11:40486834-40487240 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 183

Conread position: 2-387
Cow position: chr11:57625500-57625101 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 53

Conread position: 2-387
Cow position: chr11:81067425-81067828 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 283

Conread position: 2-388
Cow position: chr11:7680640-7681053 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 89

Conread position: 2-388
Cow position: chr11:14260282-14259869 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 165

Conread position: 2-388
Cow position: chr11:37279900-37279489 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 290

Conread position: 2-388
Cow position: chr11:38640627-38641041 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-388
Cow position: chr11:40403083-40402679 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 287

Conread position: 2-388
Cow position: chr11:44106352-44106774 (view UCSC Genome Browser custom track)
Alignm length: 424
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 303

Conread position: 2-388
Cow position: chr11:54728136-54728549 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 91

Conread position: 2-388
Cow position: chr11:80789716-80789298 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 294
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 47, 24

Conread position: 2-389
Cow position: chr11:11591659-11592072 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 47

Conread position: 2-389
Cow position: chr11:44233111-44233513 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 39

Conread position: 2-390
Cow position: chr11:10093557-10093961 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 57

Conread position: 2-390
Cow position: chr11:26122245-26121828 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 299

Conread position: 2-390
Cow position: chr11:26550157-26550568 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 87

Conread position: 2-390
Cow position: chr11:29663373-29662962 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 161

Conread position: 2-390
Cow position: chr11:33601952-33601547 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 246

Conread position: 2-390
Cow position: chr11:38600024-38599622 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 230, 47

Conread position: 2-390
Cow position: chr11:43511295-43510883 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 161

Conread position: 2-390
Cow position: chr11:58139383-58139786 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 79

Conread position: 3-215
Cow position: chr11:45107518-45107737 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 170
Alignm E-value: 9.00054e-42
Alignm gaps (pig, cow): 45, 0

Conread position: 3-240
Cow position: chr11:38832801-38832557 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 179

Conread position: 3-240
Cow position: chr11:60223009-60222766 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 3-367
Cow position: chr11:20731545-20731152 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 297

Conread position: 3-386
Cow position: chr11:78778420-78778015 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 272
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 46, 8

Conread position: 4-240
Cow position: chr11:17853772-17854014 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-241
Cow position: chr11:49171820-49171577 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 4-367
Cow position: chr11:10850799-10851184 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 171

Conread position: 4-367
Cow position: chr11:30201015-30200629 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 331

Conread position: 4-367
Cow position: chr11:63652984-63652607 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 6

Conread position: 4-384
Cow position: chr11:16229969-16229569 (view UCSC Genome Browser custom track)
Alignm length: 402
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 385

Conread position: 4-388
Cow position: chr11:1505319-1504904 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 6-385
Cow position: chr11:10365709-10365307 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 285
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 24, 186

Conread position: 7-383
Cow position: chr11:7376731-7377107 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 248
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 49

Conread position: 7-390
Cow position: chr11:13087986-13087575 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 293

Conread position: 8-240
Cow position: chr11:37117756-37117988 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 39, 133

Conread position: 9-388
Cow position: chr11:25335824-25336231 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 5

Conread position: 10-383
Cow position: chr11:38793271-38793664 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 283

Conread position: 10-388
Cow position: chr11:33688334-33687957 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 210

Conread position: 19-367
Cow position: chr11:63860950-63860574 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 241

Conread position: 29-367
Cow position: chr11:15495093-15495458 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 18, 52

Conread position: 59-384
Cow position: chr11:43361975-43361632 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 243
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 13, 77

Conread position: 59-388
Cow position: chr11:21471371-21471717 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 257
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 86

Conread position: 59-388
Cow position: chr11:48427886-48428233 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 242
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 16, 229

Conread position: 69-365
Cow position: chr11:73137340-73137659 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 235
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 122, 226

Conread position: 69-384
Cow position: chr11:52127958-52128295 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 242
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 114, 225

Conread position: 69-387
Cow position: chr11:16548201-16547861 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 125, 225

Conread position: 69-388
Cow position: chr11:9154147-9153810 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 140, 223

Conread position: 69-388
Cow position: chr11:40773304-40772978 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 54

Conread position: 85-389
Cow position: chr11:17782262-17781938 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 254
Alignm E-value: 0
Alignm gaps (pig, cow): 147, 209

Conread position: 93-385
Cow position: chr11:63167725-63167432 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 160

Conread position: 113-388
Cow position: chr11:59369240-59368943 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 37, 179

Conread position: 114-377
Cow position: chr11:10873390-10873660 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 187
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 128, 156

Conread position: 133-389
Cow position: chr11:17832381-17832115 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 5, 149

Conread position: 141-389
Cow position: chr11:87155177-87154918 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 191
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 53, 147

Conread position: 143-367
Cow position: chr11:66390184-66389937 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 188
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 63, 111

Conread position: 149-388
Cow position: chr11:52515353-52515599 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 191
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 13, 136

Conread position: 150-385
Cow position: chr11:38505401-38505144 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 185
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 144

Conread position: 165-388
Cow position: chr11:31836035-31836276 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 70, 123

Conread position: 173-388
Cow position: chr11:56652386-56652151 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 177
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 24, 35

Conread position: 178-388
Cow position: chr11:42517211-42517431 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 153
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 40, 14

Conread position: 228-388
Cow position: chr11:37345872-37346035 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 118
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 83, 45

Conread position: 230-371
Cow position: chr11:15988219-15988363 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 81, 52

Conread position: 236-388
Cow position: chr11:21853314-21853159 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 125
Alignm E-value: 8e-31
Alignm gaps (pig, cow): 67, 37

Conread position: 238-386
Cow position: chr11:9432319-9432467 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 32

Conread position: 238-388
Cow position: chr11:26482510-26482662 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 73, 35

Conread position: 244-383
Cow position: chr11:38235826-38235683 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 9, 31

Conread position: 244-388
Cow position: chr11:67849029-67848880 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 11, 31

Conread position: 244-389
Cow position: chr11:47758045-47757895 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 10, 31

Conread position: 244-390
Cow position: chr11:43917377-43917526 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 11, 31

Conread position: 247-388
Cow position: chr11:8499014-8499159 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 63, 26

Conread position: 250-388
Cow position: chr11:21372130-21371989 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 61, 23

Conread position: 252-385
Cow position: chr11:44915728-44915594 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 59, 21

Conread position: 1-239
Cow position: chr12:1056549-1056305 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-153
Cow position: chr12:22480036-22479879 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 2-154
Cow position: chr12:3363903-3364061 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 2-160
Cow position: chr12:1469165-1469001 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 45, 0

Conread position: 2-175
Cow position: chr12:536609-536430 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 141
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position: chr12:31329659-31329473 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 145
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 45, 0

Conread position: 2-200
Cow position: chr12:46163699-46163903 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 163
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 2-201
Cow position: chr12:42194594-42194798 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 165
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 192

Conread position: 2-206
Cow position: chr12:24992863-24992653 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 168
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 0

Conread position: 2-206
Cow position: chr12:35473576-35473366 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 172
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-219
Cow position: chr12:26870267-26870491 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 175
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 41, 155

Conread position: 2-224
Cow position: chr12:24696505-24696733 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr12:62248-62004 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:758380-758624 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 187
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 45, 157

Conread position: 2-240
Cow position: chr12:1006975-1007219 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:1491126-1491370 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:1511804-1511560 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:3717314-3717070 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr12:5107017-5107261 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:5327950-5327706 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:5777170-5776926 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:8839212-8839457 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:9988728-9988483 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:11101208-11101451 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 153

Conread position: 2-240
Cow position: chr12:12755195-12754953 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 104

Conread position: 2-240
Cow position: chr12:14568855-14568611 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:17718260-17718504 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:18585632-18585876 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:20459759-20459516 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 174

Conread position: 2-240
Cow position: chr12:21719213-21718974 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 194

Conread position: 2-240
Cow position: chr12:23138369-23138125 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:23521203-23520959 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr12:27614375-27614619 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:27929832-27929588 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:27958566-27958322 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:27994060-27994304 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:31027861-31027616 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:34176324-34176568 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:35161567-35161811 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:35162723-35162967 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:39930128-39930372 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:42232269-42232513 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:42856571-42856328 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:45145012-45145256 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr12:48416785-48416543 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 202

Conread position: 2-243
Cow position: chr12:551855-551608 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr12:250353-249967 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 290

Conread position: 2-367
Cow position: chr12:6106388-6106001 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 25

Conread position: 2-367
Cow position: chr12:12928946-12928557 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 2-367
Cow position: chr12:20994805-20994413 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-367
Cow position: chr12:21251352-21250961 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 137

Conread position: 2-367
Cow position: chr12:21665095-21665489 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-367
Cow position: chr12:22748174-22748569 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 299

Conread position: 2-367
Cow position: chr12:24980681-24981070 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 213

Conread position: 2-367
Cow position: chr12:25148658-25148265 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-367
Cow position: chr12:38893322-38893717 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 299

Conread position: 2-367
Cow position: chr12:42605216-42604830 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 291

Conread position: 2-368
Cow position: chr12:22202708-22202327 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 209

Conread position: 2-368
Cow position: chr12:25266373-25265979 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 137

Conread position: 2-377
Cow position: chr12:10358655-10359058 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-382
Cow position: chr12:8773625-8774033 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 297

Conread position: 2-385
Cow position: chr12:37561968-37562375 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 167

Conread position: 2-386
Cow position: chr12:21904325-21904732 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 26

Conread position: 2-388
Cow position: chr12:21074797-21075203 (view UCSC Genome Browser custom track)
Alignm length: 410
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 2-388
Cow position: chr12:21314470-21314056 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 374

Conread position: 2-389
Cow position: chr12:1774957-1774548 (view UCSC Genome Browser custom track)
Alignm length: 411
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 124

Conread position: 2-389
Cow position: chr12:19155901-19155487 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 289
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 37, 298

Conread position: 2-389
Cow position: chr12:21484372-21484777 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-390
Cow position: chr12:1407791-1408193 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 109

Conread position: 2-390
Cow position: chr12:28764039-28763639 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 37

Conread position: 3-241
Cow position: chr12:21610565-21610808 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 4-165
Cow position: chr12:21090817-21090651 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 60, 0

Conread position: 4-383
Cow position: chr12:35367367-35367770 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 343

Conread position: 7-240
Cow position: chr12:15925787-15925548 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 8-380
Cow position: chr12:17981382-17981763 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 264
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 46, 9

Conread position: 17-366
Cow position: chr12:3180390-3180761 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 105

Conread position: 20-387
Cow position: chr12:11582148-11582534 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 29, 269

Conread position: 23-388
Cow position: chr12:19871196-19871589 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 104

Conread position: 26-371
Cow position: chr12:36288029-36287657 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 272

Conread position: 69-367
Cow position: chr12:5111028-5110711 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 173, 221

Conread position: 71-366
Cow position: chr12:28013197-28012879 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 183

Conread position: 75-367
Cow position: chr12:32088305-32088592 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 224
Alignm E-value: 0
Alignm gaps (pig, cow): 22, 32

Conread position: 76-377
Cow position: chr12:27436103-27435796 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 233
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 94, 24

Conread position: 88-388
Cow position: chr12:15796982-15797290 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 228
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 161

Conread position: 89-367
Cow position: chr12:22517800-22517501 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 115

Conread position: 90-388
Cow position: chr12:5226302-5226609 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 189

Conread position: 92-388
Cow position: chr12:41595298-41595597 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 205
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 125, 134

Conread position: 95-388
Cow position: chr12:6954399-6954691 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 198
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 135, 78

Conread position: 97-367
Cow position: chr12:21211844-21212137 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 135, 197

Conread position: 98-388
Cow position: chr12:33296690-33297005 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 200

Conread position: 150-367
Cow position: chr12:22979778-22979540 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 179
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 83, 142

Conread position: 199-367
Cow position: chr12:23441756-23441586 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 14

Conread position: 230-384
Cow position: chr12:21432555-21432710 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 79, 43

Conread position: 236-367
Cow position: chr12:31261189-31261056 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 75, 37

Conread position: 236-371
Cow position: chr12:18936049-18936187 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 37

Conread position: 242-367
Cow position: chr12:25838509-25838636 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 31

Conread position: 251-385
Cow position: chr12:34176790-34176925 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 60, 22

Conread position: 1-247
Cow position: chr13:24237282-24237533 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 39

Conread position: 1-388
Cow position: chr13:7608897-7609311 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 29

Conread position: 2-151
Cow position: chr13:35539923-35540078 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 0

Conread position: 2-173
Cow position: chr13:36672408-36672582 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 45, 117

Conread position: 2-181
Cow position: chr13:31725925-31725742 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 144
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 44, 104

Conread position: 2-183
Cow position: chr13:30242973-30243160 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 150
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 45, 0

Conread position: 2-206
Cow position: chr13:9112526-9112736 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 171
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-210
Cow position: chr13:47729047-47728836 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 169
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 45, 159

Conread position: 2-225
Cow position: chr13:28132228-28132457 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position: chr13:18122119-18121876 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position: chr13:19566471-19566715 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-239
Cow position: chr13:49976421-49976664 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:143368-143124 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:680802-681046 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:1591405-1591161 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:3556163-3556407 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:3651692-3651449 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position: chr13:3657599-3657355 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:4944141-4944385 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:5622948-5622702 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:6719413-6719169 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:11795949-11795702 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 206

Conread position: 2-240
Cow position: chr13:13902608-13902851 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 154

Conread position: 2-240
Cow position: chr13:14303232-14302991 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 120

Conread position: 2-240
Cow position: chr13:14411420-14411176 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:17921767-17921518 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 197

Conread position: 2-240
Cow position: chr13:18330374-18330130 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:21837546-21837302 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 2-240
Cow position: chr13:28131257-28131501 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:28526558-28526315 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position: chr13:28699573-28699815 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 190
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position: chr13:29055677-29055433 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:30241296-30241540 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 2-240
Cow position: chr13:30305937-30306181 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:30469364-30469123 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 134

Conread position: 2-240
Cow position: chr13:32080627-32080871 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:32253600-32253356 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:32734435-32734192 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-240
Cow position: chr13:32955709-32955466 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position: chr13:32982650-32982407 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position: chr13:34376777-34376534 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 45, 104

Conread position: 2-240
Cow position: chr13:34870711-34870955 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:36936483-36936726 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 96

Conread position: 2-240
Cow position: chr13:43120798-43120554 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position: chr13:45933502-45933746 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:50112217-50112461 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:53051587-53051831 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:53157638-53157394 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr13:58718310-58718551 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 179
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 44, 132

Conread position: 2-240
Cow position: chr13:61953994-61954237 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 121

Conread position: 2-243
Cow position: chr13:6360618-6360864 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 201

Conread position: 2-243
Cow position: chr13:14400326-14400079 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-343
Cow position: chr13:9300922-9301285 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 94

Conread position: 2-366
Cow position: chr13:31509898-31510287 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 107

Conread position: 2-366
Cow position: chr13:32549511-32549897 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 87

Conread position: 2-367
Cow position: chr13:3021734-3021340 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr13:13126956-13126570 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 31

Conread position: 2-367
Cow position: chr13:13333203-13332808 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr13:26204707-26204314 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 191

Conread position: 2-367
Cow position: chr13:31730820-31730426 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-367
Cow position: chr13:39911156-39911550 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367
Cow position: chr13:50190320-50189927 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 81

Conread position: 2-376
Cow position: chr13:34509071-34508672 (view UCSC Genome Browser custom track)
Alignm length: 403
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 294

Conread position: 2-377
Cow position: chr13:26823352-26822974 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 55

Conread position: 2-377
Cow position: chr13:38611975-38612372 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 389

Conread position: 2-383
Cow position: chr13:19239658-19240059 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 292

Conread position: 2-385
Cow position: chr13:11390009-11390420 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 312
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-385
Cow position: chr13:16807348-16807752 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 290

Conread position: 2-385
Cow position: chr13:31989625-31990035 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 311
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 297

Conread position: 2-385
Cow position: chr13:42087377-42086968 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 294

Conread position: 2-385
Cow position: chr13:60646834-60646424 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 24

Conread position: 2-388
Cow position: chr13:3001599-3001184 (view UCSC Genome Browser custom track)
Alignm length: 417
Alignm identity: 277
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 52, 305

Conread position: 2-388
Cow position: chr13:3314379-3314791 (view UCSC Genome Browser custom track)
Alignm length: 415
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 178

Conread position: 2-388
Cow position: chr13:16249193-16248774 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 62, 301

Conread position: 2-388
Cow position: chr13:20538794-20538377 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 180

Conread position: 2-388
Cow position: chr13:60425785-60426197 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 303
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 98

Conread position: 2-389
Cow position: chr13:3783887-3784295 (view UCSC Genome Browser custom track)
Alignm length: 414
Alignm identity: 302
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 187

Conread position: 2-390
Cow position: chr13:5230215-5229808 (view UCSC Genome Browser custom track)
Alignm length: 413
Alignm identity: 309
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 293

Conread position: 2-390
Cow position: chr13:6665377-6664961 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 298

Conread position: 2-390
Cow position: chr13:31608688-31608270 (view UCSC Genome Browser custom track)
Alignm length: 423
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 186

Conread position: 2-390
Cow position: chr13:32774594-32774185 (view UCSC Genome Browser custom track)
Alignm length: 412
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 308

Conread position: 2-390
Cow position: chr13:32794585-32794176 (view UCSC Genome Browser custom track)
Alignm length: 416
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 151

Conread position: 2-390
Cow position: chr13:33523207-33522791 (view UCSC Genome Browser custom track)
Alignm length: 419
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 2-390
Cow position: chr13:58313083-58313499 (view UCSC Genome Browser custom track)
Alignm length: 420
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 258

Conread position: 3-377
Cow position: chr13:20571958-20571553 (view UCSC Genome Browser custom track)
Alignm length: 407
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 298

Conread position: 4-240
Cow position: chr13:8068449-8068207 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 0

Conread position: 4-240
Cow position: chr13:20483917-20484158 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 210

Conread position: 4-241
Cow position: chr13:36347369-36347130 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 43, 191

Conread position: 4-247
Cow position: chr13:35686130-35686379 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 103

Conread position: 4-388
Cow position: chr13:47574805-47574405 (view UCSC Genome Browser custom track)
Alignm length: 408
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 131

Conread position: 4-389
Cow position: chr13:24932037-24931654 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 244
Alignm E-value: 7.9874e-44
Alignm gaps (pig, cow): 43, 201

Conread position: 6-240
Cow position: chr13:11053555-11053319 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 41, 94

Conread position: 8-382
Cow position: chr13:34927923-34928318 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 261
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 24

Conread position: 8-389
Cow position: chr13:17318616-17318211 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 276
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 39, 114

Conread position: 9-365
Cow position: chr13:513016-512659 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 253
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 56, 196

Conread position: 13-372
Cow position: chr13:9571239-9570862 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 275

Conread position: 13-375
Cow position: chr13:22774066-22774457 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 272
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 45, 286

Conread position: 20-389
Cow position: chr13:47357811-47357427 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 257
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 27, 93

Conread position: 26-367
Cow position: chr13:504109-504479 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 274

Conread position: 39-390
Cow position: chr13:2726022-2725640 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 264

Conread position: 59-388
Cow position: chr13:30652467-30652118 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 243
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 12, 96

Conread position: 69-367
Cow position: chr13:644761-645079 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 249
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 212

Conread position: 69-391
Cow position: chr13:35760373-35760710 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 218

Conread position: 72-381
Cow position: chr13:46427549-46427880 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 32

Conread position: 88-391
Cow position: chr13:26847226-26847519 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 226
Alignm E-value: 0
Alignm gaps (pig, cow): 282, 27

Conread position: 125-378
Cow position: chr13:42115114-42114836 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 210
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 31, 170

Conread position: 164-367
Cow position: chr13:35540325-35540549 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 163
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 53, 128

Conread position: 164-388
Cow position: chr13:26381656-26381884 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 165
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 40, 72

Conread position: 230-383
Cow position: chr13:52860229-52860074 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 90, 43

Conread position: 236-383
Cow position: chr13:49805930-49805780 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 115
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 84, 37

Conread position: 236-388
Cow position: chr13:54238431-54238281 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 110, 37

Conread position: 243-388
Cow position: chr13:15446988-15446845 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 122
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 127, 30

Conread position: 244-390
Cow position: chr13:28414271-28414122 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 10, 31

Conread position: 249-385
Cow position: chr13:28171994-28171857 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 71, 24

Conread position: 253-388
Cow position: chr13:30241594-30241732 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 58, 20

Conread position: 263-383
Cow position: chr13:43593875-43593992 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 107, 8

Conread position: 1-361
Cow position: chr14:36710442-36710054 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 369

Conread position: 2-142
Cow position: chr14:28210537-28210683 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 2-154
Cow position: chr14:34762803-34762645 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 125
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 45, 0

Conread position: 2-182
Cow position: chr14:45084256-45084440 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 45, 94

Conread position: 2-184
Cow position: chr14:20785716-20785904 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 148
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 45, 0

Conread position: 2-196
Cow position: chr14:43863477-43863277 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 154
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 2-202
Cow position: chr14:12066858-12066654 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 148
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 62

Conread position: 2-205
Cow position: chr14:7227029-7227238 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 165
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 45, 0

Conread position: 2-211
Cow position: chr14:14082378-14082593 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-213
Cow position: chr14:22103936-22103719 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 174
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-225
Cow position: chr14:47579239-47579468 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-234
Cow position: chr14:25166310-25166547 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-238
Cow position: chr14:15337012-15336770 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-238
Cow position: chr14:34668169-34667926 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 173
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 43, 211

Conread position: 2-238
Cow position: chr14:41478370-41478612 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 181
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position: chr14:1726768-1727011 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 189
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 85

Conread position: 2-240
Cow position: chr14:2288874-2289118 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:5645027-5645271 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:8397159-8396915 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:9047459-9047703 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr14:9744996-9744752 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:9811302-9811546 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr14:11151295-11151051 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 112

Conread position: 2-240
Cow position: chr14:12616630-12616386 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:12740428-12740184 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:12902955-12903199 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr14:13237178-13236934 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:13683187-13683431 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:13860920-13860676 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:16917105-16916862 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 0

Conread position: 2-240
Cow position: chr14:16997418-16997173 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:19418715-19418959 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:19549816-19550060 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:22027151-22026909 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 200

Conread position: 2-240
Cow position: chr14:23254717-23254473 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 192
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 0

Conread position: 2-240
Cow position: chr14:24922404-24922648 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 2-240
Cow position: chr14:31882267-31882023 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 44, 0

Conread position: 2-240
Cow position: chr14:34629581-34629330 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:34906147-34906390 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 145

Conread position: 2-240
Cow position: chr14:37226794-37227038 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:38238475-38238231 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:40968776-40969020 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:41445626-41445870 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:44077065-44076820 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 47, 0

Conread position: 2-240
Cow position: chr14:45026006-45025764 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 148

Conread position: 2-240
Cow position: chr14:46302526-46302769 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-240
Cow position: chr14:48251828-48251583 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:50113988-50114232 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 193
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-240
Cow position: chr14:50121796-50121559 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 185
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 46, 107

Conread position: 2-240
Cow position: chr14:50144847-50145091 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr14:8998236-8998481 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-241
Cow position: chr14:38459531-38459287 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 105

Conread position: 2-242
Cow position: chr14:748978-748730 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-252
Cow position: chr14:48827826-48828097 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 198
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 49, 0

Conread position: 2-323
Cow position: chr14:28208662-28208316 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 335

Conread position: 2-345
Cow position: chr14:16037221-16037569 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 181
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 192

Conread position: 2-358
Cow position: chr14:46636911-46636531 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-364
Cow position: chr14:5531961-5532352 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 0

Conread position: 2-367
Cow position: chr14:11462459-11462065 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 298

Conread position: 2-367