Cow genome map
| Conread name: | rspl04_e9.y1 |
| Conread position: | 216-447 |
| Cow position: | chr10:8996702-8996473 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 90, 19 |
| Conread position: | 259-474 |
| Cow position: | chr11:74555088-74554873 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-443 |
| Cow position: | chr14:25784331-25784555 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 152 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 18, 9 |
| Conread position: | 219-447 |
| Cow position: | chr14:25783575-25783803 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 82, 71 |
| Conread position: | 220-475 |
| Cow position: | chr17:22552116-22551861 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 71, 77 |
| Conread position: | 220-475 |
| Cow position: | chr17:22552368-22552113 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 86, 64 |
| Conread position: | 221-448 |
| Cow position: | chr17:22473483-22473710 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 85, 55 |
| Conread position: | 221-449 |
| Cow position: | chr17:22552283-22552055 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 71, 76 |
| Conread position: | 230-475 |
| Cow position: | chr17:22452055-22451810 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 54 |
| Conread position: | 230-475 |
| Cow position: | chr17:22552946-22552701 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-475 |
| Cow position: | chr18:42790639-42791116 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 428 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 127 |
| Conread position: | 49-475 |
| Cow position: | chr18:1417641-1418070 (view UCSC Genome Browser custom track) |
| Alignm length: | 432 |
| Alignm identity: | 271 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 20, 25 |
| Conread position: | 68-448 |
| Cow position: | chr18:40086111-40085726 (view UCSC Genome Browser custom track) |
| Alignm length: | 391 |
| Alignm identity: | 243 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 65, 59 |
| Conread position: | 200-456 |
| Cow position: | chr18:44398476-44398222 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 201-467 |
| Cow position: | chr18:41198125-41198391 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 201-474 |
| Cow position: | chr18:42791178-42791451 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 21 |
| Conread position: | 201-475 |
| Cow position: | chr18:50271592-50271865 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 257, 14 |
| Conread position: | 203-475 |
| Cow position: | chr18:41197959-41198231 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 174 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 89, 69 |
| Conread position: | 204-456 |
| Cow position: | chr18:44398138-44397886 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 33, 24 |
| Conread position: | 206-447 |
| Cow position: | chr18:40324749-40324508 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 147, 140 |
| Conread position: | 207-449 |
| Cow position: | chr18:42675100-42674859 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 7 |
| Conread position: | 214-442 |
| Cow position: | chr18:42675010-42674782 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 70 |
| Conread position: | 214-447 |
| Cow position: | chr18:41948869-41948636 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-447 |
| Cow position: | chr18:43168019-43168252 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-448 |
| Cow position: | chr18:42744154-42743920 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 88, 69 |
| Conread position: | 214-448 |
| Cow position: | chr18:42985165-42984931 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 214-448 |
| Cow position: | chr18:43175045-43174811 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 214-448 |
| Cow position: | chr18:44397960-44397726 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 214-453 |
| Cow position: | chr18:43119844-43119605 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-456 |
| Cow position: | chr18:52447755-52447997 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 214-469 |
| Cow position: | chr18:41949289-41949034 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 89, 80 |
| Conread position: | 215-447 |
| Cow position: | chr18:41198391-41198623 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 159, 144 |
| Conread position: | 215-447 |
| Cow position: | chr18:43093274-43093042 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 215-451 |
| Cow position: | chr18:42985332-42985096 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 215-469 |
| Cow position: | chr18:43168188-43168442 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 75, 80 |
| Conread position: | 216-447 |
| Cow position: | chr18:50083930-50084162 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 5, 91 |
| Conread position: | 216-448 |
| Cow position: | chr18:44184573-44184341 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 21, 12 |
| Conread position: | 216-448 |
| Cow position: | chr18:44397874-44397642 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 216-474 |
| Cow position: | chr18:43093609-43093351 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 90, 79 |
| Conread position: | 217-447 |
| Cow position: | chr18:41198477-41198707 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 84, 60 |
| Conread position: | 217-456 |
| Cow position: | chr18:50848733-50848972 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-475 |
| Cow position: | chr18:41197805-41198063 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 218-457 |
| Cow position: | chr18:50083681-50083920 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 75 |
| Conread position: | 218-475 |
| Cow position: | chr18:42827635-42827892 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 81, 58 |
| Conread position: | 219-447 |
| Cow position: | chr18:42792540-42792768 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-447 |
| Cow position: | chr18:43093522-43093294 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 18, 13 |
| Conread position: | 219-448 |
| Cow position: | chr18:41949200-41948971 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-448 |
| Cow position: | chr18:44398291-44398062 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 151 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 84, 75 |
| Conread position: | 220-438 |
| Cow position: | chr18:51812231-51812013 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 220-448 |
| Cow position: | chr18:43022838-43022610 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-469 |
| Cow position: | chr18:42792037-42792286 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-475 |
| Cow position: | chr18:41197556-41197811 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 220-475 |
| Cow position: | chr18:42791617-42791872 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-475 |
| Cow position: | chr18:42792121-42792376 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 79, 74 |
| Conread position: | 220-475 |
| Cow position: | chr18:43174955-43174700 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 71, 80 |
| Conread position: | 220-475 |
| Cow position: | chr18:50848484-50848739 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 221-448 |
| Cow position: | chr18:42792290-42792517 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 85, 74 |
| Conread position: | 221-469 |
| Cow position: | chr18:50271779-50272027 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 221-475 |
| Cow position: | chr18:42744231-42743977 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 228-475 |
| Cow position: | chr18:42791876-42792124 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 157 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 232-441 |
| Cow position: | chr18:33064274-33064064 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 5, 59 |
| Conread position: | 236-468 |
| Cow position: | chr18:41198076-41198308 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 236-475 |
| Cow position: | chr18:43093337-43093098 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 55, 61 |
| Conread position: | 236-475 |
| Cow position: | chr18:50059290-50059051 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-449 |
| Cow position: | chr18:49032877-49032668 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 240-474 |
| Cow position: | chr18:1418003-1418237 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 241-447 |
| Cow position: | chr18:42744715-42744509 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 62, 53 |
| Conread position: | 241-475 |
| Cow position: | chr18:43093992-43093758 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 242-469 |
| Cow position: | chr18:41949345-41949118 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 52 |
| Conread position: | 259-441 |
| Cow position: | chr18:1418274-1418456 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-447 |
| Cow position: | chr18:50246601-50246789 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 259-448 |
| Cow position: | chr18:43175588-43175399 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 259-474 |
| Cow position: | chr18:41197679-41197894 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 46, 35 |
| Conread position: | 259-475 |
| Cow position: | chr18:42827508-42827724 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 47, 37 |
| Conread position: | 261-467 |
| Cow position: | chr18:50848441-50848647 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 44, 40 |
| Conread position: | 264-447 |
| Cow position: | chr18:44398330-44398147 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 265-448 |
| Cow position: | chr18:40324186-40324003 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 266-475 |
| Cow position: | chr18:43167987-43168196 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 304-474 |
| Cow position: | chr18:1418235-1418405 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 305-475 |
| Cow position: | chr18:42791870-42792040 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 67-468 |
| Cow position: | chr19:14940140-14940553 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 256 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 76, 105 |
| Conread position: | 89-448 |
| Cow position: | chr19:23614026-23614397 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 61, 54 |
| Conread position: | 265-447 |
| Cow position: | chr19:23613374-23613556 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 300-475 |
| Cow position: | chr19:14960414-14960239 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 75, 70 |
| Conread position: | 214-469 |
| Cow position: | chr2:78755141-78755395 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 76 |
| Conread position: | 217-475 |
| Cow position: | chr2:78755395-78755652 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 76, 59 |
| Conread position: | 220-448 |
| Cow position: | chr2:78754895-78755123 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 230-475 |
| Cow position: | chr2:78755073-78755318 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 75, 55 |
| Conread position: | 235-448 |
| Cow position: | chr2:78756083-78756296 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 64, 31 |
| Conread position: | 206-418 |
| Cow position: | chr22:12385113-12384900 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 96, 88 |
| Conread position: | 208-469 |
| Cow position: | chr22:12399792-12399532 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 214-447 |
| Cow position: | chr22:12475912-12475679 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 23, 14 |
| Conread position: | 221-448 |
| Cow position: | chr22:12499690-12499917 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 69, 76 |
| Conread position: | 240-442 |
| Cow position: | chr22:12498869-12499071 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 59, 54 |
| Conread position: | 259-447 |
| Cow position: | chr22:12475531-12475343 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 32, 47 |
| Conread position: | 260-441 |
| Cow position: | chr22:12431301-12431120 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 30 |
| Conread position: | 260-448 |
| Cow position: | chr22:12499645-12499833 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 13 |
| Conread position: | 220-475 |
| Cow position: | chr23:24547267-24547012 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 17, 8 |
| Conread position: | 233-447 |
| Cow position: | chr23:25660143-25660357 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 68-447 |
| Cow position: | chr25:23420128-23420504 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 237 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 75, 83 |
| Conread position: | 259-444 |
| Cow position: | chr25:34447207-34447392 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 44 |
| Conread position: | 153-460 |
| Cow position: | chr28:9252847-9253153 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 215-451 |
| Cow position: | chr28:7757557-7757794 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 234, 0 |
| Conread position: | 215-467 |
| Cow position: | chr28:7757725-7757977 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 86, 69 |
| Conread position: | 215-467 |
| Cow position: | chr28:7758061-7758313 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 215-475 |
| Cow position: | chr28:7757473-7757733 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 76, 82 |
| Conread position: | 215-475 |
| Cow position: | chr28:9253244-9253504 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 234, 238 |
| Conread position: | 217-419 |
| Cow position: | chr28:9253414-9253617 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 190, 0 |
| Conread position: | 236-444 |
| Cow position: | chr28:9290413-9290620 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 242-447 |
| Cow position: | chr28:9299221-9299426 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 261-448 |
| Cow position: | chr28:7810283-7810470 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 85-448 |
| Cow position: | chr3:68026923-68027298 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 236 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 34 |
| Conread position: | 260-448 |
| Cow position: | chr3:62722223-62722035 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 44, 27 |
| Conread position: | 1-447 |
| Cow position: | chr7:42879616-42879155 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 285 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 69, 245 |
| Conread position: | 182-447 |
| Cow position: | chr7:11601248-11600982 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 201-475 |
| Cow position: | chr7:42879065-42878791 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 36, 27 |
| Conread position: | 208-475 |
| Cow position: | chr7:1439692-1439956 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 9 |
| Conread position: | 220-447 |
| Cow position: | chr7:42878710-42878483 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-474 |
| Cow position: | chr7:42878962-42878708 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 240, 232 |
| Conread position: | 220-475 |
| Cow position: | chr7:42878626-42878371 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 165, 170 |
| Conread position: | 224-475 |
| Cow position: | chr7:42878536-42878287 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 82, 11 |
| Conread position: | 240-447 |
| Cow position: | chr7:3180199-3180406 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 138 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 65, 56 |
| Conread position: | 240-447 |
| Cow position: | chr7:3180535-3180742 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 262-475 |
| Cow position: | chr7:42878752-42878539 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 153 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 31, 23 |
| Conread position: | 265-475 |
| Cow position: | chr7:42879169-42878959 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 34, 29 |
| Conread position: | 198-448 |
| Cow position: | chr8:55581114-55581364 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-475 |
| Cow position: | chr8:46816776-46817034 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 219-475 |
| Cow position: | chr8:46816442-46816698 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-447 |
| Cow position: | chr8:46816695-46816922 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 82, 74 |
| Conread position: | 220-461 |
| Cow position: | chr8:45201164-45201405 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 145, 139 |
| Conread position: | 220-475 |
| Cow position: | chr8:46816191-46816446 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 56 |
| Conread position: | 220-475 |
| Cow position: | chr8:46816863-46817118 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 71, 63 |
| Conread position: | 220-475 |
| Cow position: | chr8:46816947-46817202 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 221-474 |
| Cow position: | chr8:46816108-46816361 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 84, 73 |
| Conread position: | 236-467 |
| Cow position: | chr8:45201264-45201495 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 264-447 |
| Cow position: | chr8:46816319-46816502 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 264-475 |
| Cow position: | chr8:46815983-46816194 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 304-474 |
| Cow position: | chr8:46816695-46816865 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 61, 55 |
| Conread position: | 305-466 |
| Cow position: | chr8:46816108-46816269 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-463 |
| Cow position: | chrX:25326091-25325618 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 322 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 296 |
| Conread position: | 99-474 |
| Cow position: | chrX:29045970-29045595 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 242 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 109, 115 |
| Conread position: | 190-475 |
| Cow position: | chrX:29045060-29044775 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 214-475 |
| Cow position: | chrX:25309778-25310039 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 11, 23 |
| Conread position: | 217-448 |
| Cow position: | chrX:29045684-29045453 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 217-474 |
| Cow position: | chrX:25324772-25324515 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 20, 11 |
| Conread position: | 219-474 |
| Cow position: | chrX:25324938-25324683 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 72, 78 |
| Conread position: | 219-475 |
| Cow position: | chrX:29044947-29044691 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-460 |
| Cow position: | chrX:25325357-25325117 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 220-466 |
| Cow position: | chrX:25324853-25324607 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 221-448 |
| Cow position: | chrX:25309869-25310096 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 221-475 |
| Cow position: | chrX:25325776-25325522 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 222-475 |
| Cow position: | chrX:25325437-25325186 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 9 |
| Conread position: | 236-475 |
| Cow position: | chrX:25325593-25325354 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 70 |
| Conread position: | 260-447 |
| Cow position: | chrX:29045326-29045139 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 264-475 |
| Cow position: | chrX:25325061-25324850 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 26, 33 |
| Conread position: | 264-475 |
| Cow position: | chrX:25325229-25325018 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 99, 95 |
| Conread position: | 264-475 |
| Cow position: | chrX:29045721-29045510 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 31 |