Cow genome map
| Conread name: | unkn-MI-P-AY0-ner-c-03-0-UI.s1 |
| Conread position: | 5-271 |
| Cow position: | chr1:72158614-72158349 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 46 |
| Conread position: | 99-271 |
| Cow position: | chr1:60822673-60822501 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 100-262 |
| Cow position: | chr1:76254373-76254534 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 68-264 |
| Cow position: | chr10:27290126-27289930 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 154 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 5-208 |
| Cow position: | chr11:31448106-31447908 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 46, 64 |
| Conread position: | 7-270 |
| Cow position: | chr11:35219622-35219355 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 44 |
| Conread position: | 7-271 |
| Cow position: | chr11:78298762-78298506 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 45 |
| Conread position: | 93-269 |
| Cow position: | chr11:68999546-68999377 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 66, 120 |
| Conread position: | 6-271 |
| Cow position: | chr12:2955902-2955638 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 19-178 |
| Cow position: | chr13:25957393-25957236 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 8-161 |
| Cow position: | chr15:15052357-15052196 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 41, 62 |
| Conread position: | 93-271 |
| Cow position: | chr15:23805841-23806011 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 119-271 |
| Cow position: | chr15:23458630-23458784 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 21, 115 |
| Conread position: | 167-271 |
| Cow position: | chr15:15052151-15052047 (view UCSC Genome Browser custom track) |
| Alignm length: | 105 |
| Alignm identity: | 84 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 3-263 |
| Cow position: | chr16:2456301-2456042 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 5-270 |
| Cow position: | chr17:27703056-27703320 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 64 |
| Conread position: | 2-270 |
| Cow position: | chr18:45583727-45583467 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 26 |
| Conread position: | 116-270 |
| Cow position: | chr18:38987181-38987326 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 1-271 |
| Cow position: | chr19:10100747-10101014 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 0 |
| Conread position: | 2-215 |
| Cow position: | chr19:47779414-47779624 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 118, 0 |
| Conread position: | 6-271 |
| Cow position: | chr19:29684272-29684019 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 7-267 |
| Cow position: | chr19:8518338-8518078 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 14, 21 |
| Conread position: | 10-271 |
| Cow position: | chr19:13446825-13447085 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 59 |
| Conread position: | 2-270 |
| Cow position: | chr2:19056644-19056380 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 4-270 |
| Cow position: | chr2:50610335-50610071 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 20 |
| Conread position: | 4-271 |
| Cow position: | chr2:61152732-61152468 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 7-263 |
| Cow position: | chr2:67611622-67611888 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 118 |
| Conread position: | 11-271 |
| Cow position: | chr21:22836480-22836741 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 197 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 117, 40 |
| Conread position: | 9-271 |
| Cow position: | chr23:13842291-13842553 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 39 |
| Conread position: | 1-271 |
| Cow position: | chr24:27083499-27083235 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 46 |
| Conread position: | 7-260 |
| Cow position: | chr24:2664178-2664418 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 8-271 |
| Cow position: | chr24:28022494-28022758 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 196 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 20, 86 |
| Conread position: | 9-222 |
| Cow position: | chr26:13268446-13268227 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 29, 202 |
| Conread position: | 1-269 |
| Cow position: | chr27:22541617-22541351 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 50 |
| Conread position: | 3-271 |
| Cow position: | chr27:24299799-24299532 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 48 |
| Conread position: | 14-270 |
| Cow position: | chr28:8130073-8130318 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 33, 15 |
| Conread position: | 11-191 |
| Cow position: | chr29:8901636-8901453 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 38, 60 |
| Conread position: | 1-271 |
| Cow position: | chr3:18613869-18613602 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 207 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 11-271 |
| Cow position: | chr3:31405939-31406199 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 206 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 16 |
| Conread position: | 3-271 |
| Cow position: | chr4:57232159-57232422 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 67 |
| Conread position: | 118-271 |
| Cow position: | chr5:57100351-57100500 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 15-260 |
| Cow position: | chr6:54518546-54518292 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 43, 36 |
| Conread position: | 67-269 |
| Cow position: | chr6:41927263-41927467 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 161 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 38, 98 |
| Conread position: | 9-271 |
| Cow position: | chr7:68498379-68498636 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 48-270 |
| Cow position: | chr7:10795135-10794917 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 67-271 |
| Cow position: | chr7:14275214-14275418 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 6-271 |
| Cow position: | chr8:32010877-32010613 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 45 |
| Conread position: | 8-271 |
| Cow position: | chr8:18942206-18941942 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 19 |
| Conread position: | 1-270 |
| Cow position: | chr9:35097623-35097357 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 213 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 8-268 |
| Cow position: | chr9:48553823-48554084 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 39 |
| Conread position: | 24-255 |
| Cow position: | chr9:53316797-53317018 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 1-270 |
| Cow position: | chrX:21812453-21812187 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 18-230 |
| Cow position: | chrX:14321248-14321457 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 10 |